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Pieter Baas grad student 2005 Leiden (Systematics Tree)
 (Diversity in Leccinum: a molecular phylogenetic approach.)
Teresa E. Pawlowska post-doc 2005-2007 Cornell
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Novoa Rama E, Bailey M, Kumar S, et al. (2023) Characterizing the gut microbiome of broilers raised under conventional and no antibiotics ever practices. Poultry Science. 102: 102832
Erickson MC, Liao JY, Payton AS, et al. (2018) Pre-harvest internalization and surface survival of Salmonella and Escherichia coli O157:H7 sprayed onto different lettuce cultivars under field and growth chamber conditions. International Journal of Food Microbiology. 291: 197-204
Bergholz TM, den Bakker HC, Katz LS, et al. (2015) Evolutionary Relationships of Outbreak-associated Listeria monocytogenes Strains of Serotypes 1/2a and 1/2b Determined by Whole Genome Sequencing. Applied and Environmental Microbiology
Toomer KH, Chen X, Naito M, et al. (2015) Molecular evolution patterns reveal life history features of mycoplasma-related endobacteria associated with arbuscular mycorrhizal fungi. Molecular Ecology. 24: 3485-500
Deng X, Desai PT, den Bakker HC, et al. (2014) Genomic epidemiology of Salmonella enterica serotype Enteritidis based on population structure of prevalent lineages. Emerging Infectious Diseases. 20: 1481-9
Switt AI, den Bakker HC, Vongkamjan K, et al. (2013) Salmonella bacteriophage diversity reflects host diversity on dairy farms. Food Microbiology. 36: 275-85
Vankuren NW, den Bakker HC, Morton JB, et al. (2013) Ribosomal RNA gene diversity, effective population size, and evolutionary longevity in asexual glomeromycota. Evolution; International Journal of Organic Evolution. 67: 207-24
den Bakker HC, Moreno Switt AI, Govoni G, et al. (2011) Genome sequencing reveals diversification of virulence factor content and possible host adaptation in distinct subpopulations of Salmonella enterica. Bmc Genomics. 12: 425
den Bakker HC, Cummings CA, Ferreira V, et al. (2010) Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss. Bmc Genomics. 11: 688
den Bakker HC, Vankuren NW, Morton JB, et al. (2010) Clonality and recombination in the life history of an asexual arbuscular mycorrhizal fungus. Molecular Biology and Evolution. 27: 2474-86
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