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| Carrillo JD, Püschel HP. (2023) Pleistocene South American native ungulates (Notoungulata and Litopterna) of the historical Roth collections in Switzerland, from the Pampean Region of Argentina. Swiss Journal of Palaeontology. 142: 28 |
| Ralimanana H, Perrigo AL, Smith RJ, et al. (2022) Madagascar's extraordinary biodiversity: Threats and opportunities. Science (New York, N.Y.). 378: eadf1466 |
| Antonelli A, Smith RJ, Perrigo AL, et al. (2022) Madagascar's extraordinary biodiversity: Evolution, distribution, and use. Science (New York, N.Y.). 378: eabf0869 |
| Carrillo-Briceño JD, Sánchez R, Scheyer TM, et al. (2021) A Pliocene-Pleistocene continental biota from Venezuela. Swiss Journal of Palaeontology. 140: 9 |
| Carrillo-Briceño JD, Sánchez R, Scheyer TM, et al. (2021) A Pliocene–Pleistocene continental biota from Venezuela Swiss Journal of Palaeontology. 140 |
| Carrillo JD, Faurby S, Silvestro D, et al. (2020) Disproportionate extinction of South American mammals drove the asymmetry of the Great American Biotic Interchange. Proceedings of the National Academy of Sciences of the United States of America |
| Zurita-Altamirano D, Buffetaut E, Forasiepi AM, et al. (2019) The Allemann collection from the Santa Cruz Formation (late early Miocene), Argentina, in Zurich, Switzerland Swiss Journal of Palaeontology. 138: 259-275 |
| Carrillo-Briceño JD, Carrillo JD, Aguilera OA, et al. (2018) Shark and ray diversity in the Tropical America (Neotropics)-an examination of environmental and historical factors affecting diversity. Peerj. 6: e5313 |
| Carrillo JD, Asher RJ. (2017) An exceptionally well-preserved skeleton of Thomashuxleya externa (Mammalia, Notoungulata), from the Eocene of Patagonia, Argentina Palaeontologia Electronica. 20: 1-33 |
| Pérez ME, Vallejo-Pareja MC, Carrillo JD, et al. (2017) A New Pliocene Capybara (Rodentia, Caviidae) from Northern South America (Guajira, Colombia), and its Implications for the Great American Biotic Interchange Journal of Mammalian Evolution. 24: 111-125 |