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Sign in to add traineeFanny Pouyet | grad student | 2013-2016 | Université Claude Bernard Lyon 1, France |
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Publications
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Gàlvez-Morante A, Guéguen L, Natsidis P, et al. (2024) Dollo Parsimony Overestimates Ancestral Gene Content Reconstructions. Genome Biology and Evolution. 16 |
Comte N, Morel B, Hasić D, et al. (2020) Treerecs: an integrated phylogenetic tool, from sequences to reconciliations. Bioinformatics (Oxford, England) |
Rey C, Lanore V, Veber P, et al. (2019) Detecting adaptive convergent amino acid evolution. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 374: 20180234 |
Rey C, Guéguen L, Sémon M, et al. (2018) Accurate detection of convergent amino-acid evolution with PCOC. Molecular Biology and Evolution |
Lassalle F, Planel R, Penel S, et al. (2017) Ancestral genome estimation reveals the history of ecological diversification in Agrobacterium. Genome Biology and Evolution |
Lefébure T, Morvan C, Malard F, et al. (2017) Less effective selection leads to larger genomes. Genome Research |
Noutahi E, Semeria M, Lafond M, et al. (2016) Efficient Gene Tree Correction Guided by Genome Evolution. Plos One. 11: e0159559 |
Lassalle F, Campillo T, Vial L, et al. (2011) Genomic species are ecological species as revealed by comparative genomics in Agrobacterium tumefaciens. Genome Biology and Evolution. 3: 762-81 |
Boussau B, Guéguen L, Gouy M. (2009) A mixture model and a hidden markov model to simultaneously detect recombination breakpoints and reconstruct phylogenies. Evolutionary Bioinformatics Online. 5: 67-79 |
Boussau B, Guéguen L, Gouy M. (2008) Accounting for horizontal gene transfers explains conflicting hypotheses regarding the position of aquificales in the phylogeny of Bacteria. Bmc Evolutionary Biology. 8: 272 |