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Zhenguo Lin - Publications

Affiliations: 
2008 Pennsylvania State University, State College, PA, United States 
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33 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Li S, Wei L, Gao Q, Xu M, Wang Y, Lin Z, Holford P, Chen ZH, Zhang L. Molecular and phylogenetic evidence of parallel expansion of anion channels in plants. Plant Physiology. PMID 38142233 DOI: 10.1093/plphys/kiad687  0.648
2023 Li X, Yu S, Cheng Z, Chang X, Yun Y, Jiang M, Chen X, Wen X, Li H, Zhu W, Xu S, Xu Y, Wang X, Zhang C, Wu Q, ... ... Lin Z, et al. Origin and evolution of the triploid cultivated banana genome. Nature Genetics. PMID 38082204 DOI: 10.1038/s41588-023-01589-3  0.746
2023 Liu H, Liu X, Chang X, Chen F, Lin Z, Zhang L. Large-scale analyses of angiosperm genes reveal duplication and functional divergence in monocots. Frontiers in Plant Science. 13: 1039500. PMID 36684773 DOI: 10.3389/fpls.2022.1039500  0.714
2022 Park W, Lu Z, Lin Z. Comparative Study of Quantitative TSS Maps among Yeast Strains Demonstrates Key Genetic Sites Required for TSS Selection. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. PMID 35556467 DOI: 10.1096/fasebj.2022.36.S1.0R408  0.371
2020 Chang X, Xie S, Wei L, Lu Z, Chen ZH, Chen F, Lai Z, Lin Z, Zhang L. Origins and Stepwise Expansion of R2R3-MYB Transcription Factors for the Terrestrial Adaptation of Plants. Frontiers in Plant Science. 11: 575360. PMID 33424877 DOI: 10.3389/fpls.2020.575360  0.665
2020 Mersman BA, Jolly SN, Lin Z, Xu F. Gap Junction Coding Innexin in : Sequence Analysis and Characterization in Tissues and the Central Nervous System. Frontiers in Synaptic Neuroscience. 12: 1. PMID 32158385 DOI: 10.3389/Fnsyn.2020.00001  0.468
2020 Zhang L, Shen FM, Chen F, Lin Z. Origin and evolution of the 2019 novel coronavirus. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 32011673 DOI: 10.1093/Cid/Ciaa112  0.571
2019 Fanter CE, Lin Z, Keenan SW, Janzen FJ, Mitchell TS, Warren DE. Development-specific transcriptomic profiling suggests new mechanisms for anoxic survival in the ventricle of overwintering turtles. The Journal of Experimental Biology. PMID 31862849 DOI: 10.1242/Jeb.213918  0.35
2019 Chen F, Song Y, Li X, Chen J, Mo L, Zhang X, Lin Z, Zhang L. Genome sequences of horticultural plants: past, present, and future. Horticulture Research. 6: 112. PMID 31645966 DOI: 10.1038/S41438-019-0195-6  0.657
2019 Mullis A, Lu Z, Zhan Y, Wang TY, Rodriguez J, Rajeh A, Chatrath A, Lin Z. Parallel Concerted Evolution of Ribosomal Protein Genes in Fungi and Its Adaptive Significance. Molecular Biology and Evolution. PMID 31589316 DOI: 10.1093/Molbev/Msz229  0.569
2019 Lu Z, Lin Z. Pervasive and dynamic transcription initiation in . Genome Research. PMID 31076411 DOI: 10.1101/Gr.245456.118  0.485
2019 McMillan J, Lu Z, Rodriguez JS, Ahn TH, Lin Z. YeasTSS: an integrative web database of yeast transcription start sites. Database : the Journal of Biological Databases and Curation. 2019. PMID 31032841 DOI: 10.1093/Database/Baz048  0.457
2018 Chen F, Dong W, Zhang J, Guo X, Chen J, Wang Z, Lin Z, Tang H, Zhang L. The Sequenced Angiosperm Genomes and Genome Databases. Frontiers in Plant Science. 9: 418. PMID 29706973 DOI: 10.3389/Fpls.2018.00418  0.655
2018 Chen F, Zhang L, Lin Z, Cheng ZM. Identification of a novel fused gene family implicates convergent evolution in eukaryotic calcium signaling. Bmc Genomics. 19: 306. PMID 29703146 DOI: 10.1186/S12864-018-4685-Y  0.597
2018 Rajeh A, Lv J, Lin Z. Heterogeneous rates of genome rearrangement contributed to the disparity of species richness in Ascomycota. Bmc Genomics. 19: 282. PMID 29690866 DOI: 10.1186/S12864-018-4683-0  0.424
2017 Chen F, Hu Y, Vannozzi A, Wu K, Cai H, Qin Y, Mullis A, Lin Z, Zhang L. The WRKY Transcription Factor Family in Model Plants and Crops Critical Reviews in Plant Sciences. 36: 311-335. DOI: 10.1080/07352689.2018.1441103  0.404
2016 Wang B, Han X, Bai Y, Lin Z, Qiu M, Nie X, Wang S, Zhang F, Zhuang Z, Yuan J, Wang S. Effects of nitrogen metabolism on growth and aflatoxin biosynthesis in Aspergillus flavus. Journal of Hazardous Materials. PMID 27899241 DOI: 10.1016/J.Jhazmat.2016.11.043  0.324
2016 Zhang L, Chen F, Zhang GQ, Zhang YQ, Niu S, Xiong JS, Lin Z, Cheng ZM, Liu ZJ. Origin and mechanism of crassulacean acid metabolism in orchids as implied by comparative transcriptomics and genomics of the carbon fixation pathway. The Plant Journal : For Cell and Molecular Biology. PMID 26959080 DOI: 10.1111/Tpj.13159  0.685
2014 Li Y, Zhang W, Zheng D, Zhou Z, Yu W, Zhang L, Feng L, Liang X, Guan W, Zhou J, Chen J, Lin Z. Genomic evolution of Saccharomyces cerevisiae under Chinese rice wine fermentation. Genome Biology and Evolution. 6: 2516-26. PMID 25212861 DOI: 10.1093/Gbe/Evu201  0.39
2014 Lin Z, Li WH. Comparative genomics and evolutionary genetics of yeast carbon metabolism Molecular Mechanisms in Yeast Carbon Metabolism. 97-120. DOI: 10.1007/978-3-642-55013-3_5  0.469
2013 Zhu Y, Lin Z, Nakhleh L. Evolution after whole-genome duplication: a network perspective. G3 (Bethesda, Md.). 3: 2049-57. PMID 24048644 DOI: 10.1534/G3.113.008458  0.518
2013 Lin Z, Wang TY, Tsai BS, Wu FT, Yu FJ, Tseng YJ, Sung HM, Li WH. Identifying cis-regulatory changes involved in the evolution of aerobic fermentation in yeasts. Genome Biology and Evolution. 5: 1065-78. PMID 23650209 DOI: 10.1093/Gbe/Evt067  0.635
2012 Li Y, Zhang L, Ball RL, Liang X, Li J, Lin Z, Liang H. Comparative analysis of somatic copy-number alterations across different human cancer types reveals two distinct classes of breakpoint hotspots. Human Molecular Genetics. 21: 4957-65. PMID 22899649 DOI: 10.1093/Hmg/Dds340  0.36
2012 Lin Z, Li WH. Evolution of 5' untranslated region length and gene expression reprogramming in yeasts. Molecular Biology and Evolution. 29: 81-9. PMID 21965341 DOI: 10.1093/Molbev/Msr143  0.622
2011 Lin Z, Li WH. The evolution of aerobic fermentation in Schizosaccharomyces pombe was associated with regulatory reprogramming but not nucleosome reorganization. Molecular Biology and Evolution. 28: 1407-13. PMID 21127171 DOI: 10.1093/Molbev/Msq324  0.639
2011 Lin Z, Li WH. Expansion of hexose transporter genes was associated with the evolution of aerobic fermentation in yeasts. Molecular Biology and Evolution. 28: 131-42. PMID 20660490 DOI: 10.1093/Molbev/Msq184  0.612
2010 Lin Z, Wu WS, Liang H, Woo Y, Li WH. The spatial distribution of cis regulatory elements in yeast promoters and its implications for transcriptional regulation. Bmc Genomics. 11: 581. PMID 20958978 DOI: 10.1186/1471-2164-11-581  0.508
2010 Zhou X, Lin Z, Ma H. Phylogenetic detection of numerous gene duplications shared by animals, fungi and plants. Genome Biology. 11: R38. PMID 20370904 DOI: 10.1186/Gb-2010-11-4-R38  0.748
2009 Li YD, Liang H, Gu Z, Lin Z, Guan W, Zhou L, Li YQ, Li WH. Detecting positive selection in the budding yeast genome. Journal of Evolutionary Biology. 22: 2430-7. PMID 19878412 DOI: 10.1111/J.1420-9101.2009.01851.X  0.417
2008 Lin Z, Ma H, Nei M. Ultraconserved coding regions outside the homeobox of mammalian Hox genes. Bmc Evolutionary Biology. 8: 260. PMID 18816392 DOI: 10.1186/1471-2148-8-260  0.676
2007 Lin Z, Nei M, Ma H. The origins and early evolution of DNA mismatch repair genes--multiple horizontal gene transfers and co-evolution. Nucleic Acids Research. 35: 7591-603. PMID 17965091 DOI: 10.1093/Nar/Gkm921  0.702
2006 Lin Z, Kong H, Nei M, Ma H. Origins and evolution of the recA/RAD51 gene family: evidence for ancient gene duplication and endosymbiotic gene transfer. Proceedings of the National Academy of Sciences of the United States of America. 103: 10328-33. PMID 16798872 DOI: 10.1073/Pnas.0604232103  0.776
2005 Li W, Yang X, Lin Z, Timofejeva L, Xiao R, Makaroff CA, Ma H. The AtRAD51C gene is required for normal meiotic chromosome synapsis and double-stranded break repair in Arabidopsis. Plant Physiology. 138: 965-76. PMID 15923332 DOI: 10.1104/Pp.104.058347  0.708
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