Thomas Bureau - Publications

Affiliations: 
1998-2000 Biology McGill University, Montreal, QC, Canada 

45 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Zhang HH, Zhou QZ, Wang PL, Xiong XM, Luchetti A, Raoult D, Levasseur A, Santini S, Abergel C, Legendre M, Drezen JM, Béliveau C, Cusson M, Jiang SH, Bao HO, ... ... Bureau TE, et al. Unexpected invasion of miniature inverted-repeat transposable elements in viral genomes. Mobile Dna. 9: 19. PMID 29946369 DOI: 10.1186/S13100-018-0125-4  0.384
2018 Joly-Lopez Z, Bureau TE. Exaptation of transposable element coding sequences. Current Opinion in Genetics & Development. 49: 34-42. PMID 29525543 DOI: 10.1016/j.gde.2018.02.011  0.461
2017 Joly-Lopez Z, Forczek E, Vello E, Hoen DR, Tomita A, Bureau TE. Abiotic Stress Phenotypes Are Associated with Conserved Genes Derived from Transposable Elements. Frontiers in Plant Science. 8: 2027. PMID 29250089 DOI: 10.3389/Fpls.2017.02027  0.762
2016 Joly-Lopez Z, Hoen DR, Blanchette M, Bureau TE. Phylogenetic and Genomic Analyses Resolve the Origin of Important Plant Genes Derived from Transposable Elements. Molecular Biology and Evolution. PMID 27189548 DOI: 10.1093/Molbev/Msw067  0.776
2015 Hoen DR, Hickey G, Bourque G, Casacuberta J, Cordaux R, Feschotte C, Fiston-Lavier AS, Hua-Van A, Hubley R, Kapusta A, Lerat E, Maumus F, Pollock DD, Quesneville H, Smit A, ... ... Bureau TE, et al. A call for benchmarking transposable element annotation methods. Mobile Dna. 6: 13. PMID 26244060 DOI: 10.1186/S13100-015-0044-6  0.77
2015 Edger PP, Heidel-Fischer HM, Bekaert M, Rota J, Glöckner G, Platts AE, Heckel DG, Der JP, Wafula EK, Tang M, Hofberger JA, Smithson A, Hall JC, Blanchette M, Bureau TE, et al. The butterfly plant arms-race escalated by gene and genome duplications. Proceedings of the National Academy of Sciences of the United States of America. PMID 26100883 DOI: 10.1073/Pnas.1503926112  0.604
2015 Hoen DR, Bureau TE. Discovery of novel genes derived from transposable elements using integrative genomic analysis. Molecular Biology and Evolution. 32: 1487-506. PMID 25713212 DOI: 10.1093/Molbev/Msv042  0.795
2015 Hoen DR, Hickey G, Bourque G, Casacuberta J, Cordaux R, Feschotte C, Fiston-Lavier AS, Hua-Van A, Hubley R, Kapusta A, Lerat E, Maumus F, Pollock DD, Quesneville H, Smit A, ... ... Bureau TE, et al. A call for benchmarking transposable element annotation methods Mobile Dna. 6. DOI: 10.1186/s13100-015-0044-6  0.761
2014 Joly-Lopez Z, Bureau TE. Diversity and evolution of transposable elements in Arabidopsis. Chromosome Research : An International Journal On the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology. 22: 203-16. PMID 24801342 DOI: 10.1007/s10577-014-9418-8  0.53
2013 Haudry A, Platts AE, Vello E, Hoen DR, Leclercq M, Williamson RJ, Forczek E, Joly-Lopez Z, Steffen JG, Hazzouri KM, Dewar K, Stinchcombe JR, Schoen DJ, Wang X, Schmutz J, ... ... Bureau TE, et al. An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions. Nature Genetics. 45: 891-8. PMID 23817568 DOI: 10.1038/Ng.2684  0.758
2012 Joly-Lopez Z, Forczek E, Hoen DR, Juretic N, Bureau TE. A gene family derived from transposable elements during early angiosperm evolution has reproductive fitness benefits in Arabidopsis thaliana. Plos Genetics. 8: e1002931. PMID 22969437 DOI: 10.1371/Journal.Pgen.1002931  0.817
2012 Elrouby N, Bureau TE. Modulation of auxin-binding protein 1 gene expression in maize and the teosintes by transposon insertions in its promoter. Molecular Genetics and Genomics : Mgg. 287: 143-53. PMID 22187004 DOI: 10.1007/s00438-011-0667-3  0.39
2012 Hoen DR, Bureau TE. Transposable element exaptation in plants Topics in Current Genetics. 24: 219-251. DOI: 10.1007/978-3-642-31842-9-12  0.745
2010 Elrouby N, Bureau TE. Bs1, a new chimeric gene formed by retrotransposon-mediated exon shuffling in maize. Plant Physiology. 153: 1413-24. PMID 20488894 DOI: 10.1104/pp.110.157420  0.425
2009 McNally KL, Childs KL, Bohnert R, Davidson RM, Zhao K, Ulat VJ, Zeller G, Clark RM, Hoen DR, Bureau TE, Stokowski R, Ballinger DG, Frazer KA, Cox DR, Padhukasahasram B, et al. Genomewide SNP variation reveals relationships among landraces and modern varieties of rice. Proceedings of the National Academy of Sciences of the United States of America. 106: 12273-8. PMID 19597147 DOI: 10.1073/Pnas.0900992106  0.75
2009 Kwon SJ, Park KC, Son JH, Bureau T, Park CH, Kim NS. Sequence diversity of a domesticated transposase gene, MUG1, in Oryza species. Molecules and Cells. 27: 459-65. PMID 19390827 DOI: 10.1007/S10059-009-0061-8  0.525
2008 Park KC, Kwon SJ, Kim PH, Bureau T, Kim NS. Gene structure dynamics and divergence of the polygalacturonase gene family of plants and fungus. Genome / National Research Council Canada = GéNome / Conseil National De Recherches Canada. 51: 30-40. PMID 18356937 DOI: 10.1139/g07-093  0.336
2008 Tanaka T, Antonio BA, Kikuchi S, Matsumoto T, Nagamura Y, Numa H, Sakai H, Wu J, Itoh T, Sasaki T, Aono R, Fujii Y, Habara T, Harada E, ... ... Bureau TE, et al. The Rice Annotation Project Database (RAP-DB): 2008 update. Nucleic Acids Research. 36: D1028-33. PMID 18089549 DOI: 10.1093/Nar/Gkm978  0.779
2008 Turcotte K, Srinivasan S, Bureau T. Survey of transposable elements from rice genomic sequences: Transposable elements in rice Plant Journal. 25: 169-179. DOI: 10.1111/J.1365-313X.2001.00945.X  0.534
2007 Itoh T, Tanaka T, Barrero RA, Yamasaki C, Fujii Y, Hilton PB, Antonio BA, Aono H, Apweiler R, Bruskiewich R, Bureau T, Burr F, Costa de Oliveira A, Fuks G, et al. Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana. Genome Research. 17: 175-83. PMID 17210932 DOI: 10.1101/Gr.5509507  0.793
2006 Hoen DR, Park KC, Elrouby N, Yu Z, Mohabir N, Cowan RK, Bureau TE. Transposon-mediated expansion and diversification of a family of ULP-like genes. Molecular Biology and Evolution. 23: 1254-68. PMID 16581939 DOI: 10.1093/Molbev/Msk015  0.79
2005 Juretic N, Hoen DR, Huynh ML, Harrison PM, Bureau TE. The evolutionary fate of MULE-mediated duplications of host gene fragments in rice. Genome Research. 15: 1292-7. PMID 16140995 DOI: 10.1101/Gr.4064205  0.774
2005 MacKenzie JL, Saadé FE, Le QH, Bureau TE, Schoen DJ. Genomic mutation in lines of Arabidopsis thaliana exposed to ultraviolet-B radiation. Genetics. 171: 715-23. PMID 15998725 DOI: 10.1534/Genetics.105.042002  0.673
2005 Cowan RK, Hoen DR, Schoen DJ, Bureau TE. MUSTANG is a novel family of domesticated transposase genes found in diverse angiosperms. Molecular Biology and Evolution. 22: 2084-9. PMID 15987878 DOI: 10.1093/Molbev/Msi202  0.815
2004 Le QH, Bureau T. Prediction and quality assessment of transposon insertion display data. Biotechniques. 36: 222-4, 226, 228. PMID 14989085 DOI: 10.2144/04362Bm04  0.531
2004 Juretic N, Bureau TE, Bruskiewich RM. Transposable element annotation of the rice genome. Bioinformatics (Oxford, England). 20: 155-60. PMID 14734305 DOI: 10.1093/bioinformatics/bth019  0.445
2003 Wright SI, Agrawal N, Bureau TE. Effects of recombination rate and gene density on transposable element distributions in Arabidopsis thaliana. Genome Research. 13: 1897-903. PMID 12902382 DOI: 10.1101/Gr.1281503  0.639
2002 Turcotte K, Bureau T. Phylogenetic analysis reveals stowaway-like elements may represent a fourth family of the IS630-Tc1-mariner superfamily. Genome / National Research Council Canada = GéNome / Conseil National De Recherches Canada. 45: 82-90. PMID 11908672 DOI: 10.1139/G01-127  0.551
2001 Witte CP, Le QH, Bureau T, Kumar A. Terminal-repeat retrotransposons in miniature (TRIM) are involved in restructuring plant genomes. Proceedings of the National Academy of Sciences of the United States of America. 98: 13778-83. PMID 11717436 DOI: 10.1073/Pnas.241341898  0.73
2001 Elrouby N, Bureau TE. A novel hybrid open reading frame formed by multiple cellular gene transductions by a plant long terminal repeat retroelement. The Journal of Biological Chemistry. 276: 41963-8. PMID 11553621 DOI: 10.1074/jbc.M105850200  0.359
2001 Wright SI, Le QH, Schoen DJ, Bureau TE. Population dynamics of an Ac-like transposable element in self- and cross-pollinating arabidopsis. Genetics. 158: 1279-88. PMID 11454774  0.75
2001 Le QH, Turcotte K, Bureau T. Tc8, a Tourist-like transposon in Caenorhabditis elegans. Genetics. 158: 1081-8. PMID 11454757  0.706
2001 Bevan M, Mayer K, White O, Eisen JA, Preuss D, Bureau T, Salzberg SL, Mewes HW. Sequence and analysis of the Arabidopsis genome. Current Opinion in Plant Biology. 4: 105-10. PMID 11228431 DOI: 10.1016/S1369-5266(00)00144-8  0.577
2001 Turcotte K, Srinivasan S, Bureau T. Survey of transposable elements from rice genomic sequences. The Plant Journal : For Cell and Molecular Biology. 25: 169-79. PMID 11169193 DOI: 10.1046/J.1365-313X.2001.00945.X  0.589
2000 Yu Z, Wright SI, Bureau TE. Mutator-like elements in Arabidopsis thaliana. Structure, diversity and evolution. Genetics. 156: 2019-31. PMID 11102392  0.616
2000 Elrouby N, Bureau TE. Molecular characterization of the Abp1 5'-flanking region in maize and the teosintes. Plant Physiology. 124: 369-77. PMID 10982450  0.358
2000 Le QH, Wright S, Yu Z, Bureau T. Transposon diversity in Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the United States of America. 97: 7376-81. PMID 10861007 DOI: 10.1073/Pnas.97.13.7376  0.777
1998 Song WY, Pi LY, Bureau TE, Ronald PC. Identification and characterization of 14 transposon-like elements in the noncoding regions of members of the Xa21 family of disease resistance genes in rice. Molecular & General Genetics : Mgg. 258: 449-56. PMID 9669326 DOI: 10.1007/s004380050755  0.411
1996 Bureau TE, Ronald PC, Wessler SR. A computer-based systematic survey reveals the predominance of small inverted-repeat elements in wild-type rice genes. Proceedings of the National Academy of Sciences of the United States of America. 93: 8524-9. PMID 8710903 DOI: 10.1073/Pnas.93.16.8524  0.681
1995 Wessler SR, Bureau TE, White SE. LTR-retrotransposons and MITEs: important players in the evolution of plant genomes. Current Opinion in Genetics & Development. 5: 814-21. PMID 8745082 DOI: 10.1016/0959-437X(95)80016-X  0.701
1994 Bureau TE, White SE, Wessler SR. Transduction of a cellular gene by a plant retroelement. Cell. 77: 479-80. PMID 8187172 DOI: 10.1016/0092-8674(94)90210-0  0.602
1994 Bureau TE, Wessler SR. Mobile inverted-repeat elements of the Tourist family are associated with the genes of many cereal grasses. Proceedings of the National Academy of Sciences of the United States of America. 91: 1411-5. PMID 8108422 DOI: 10.1073/Pnas.91.4.1411  0.689
1994 Bureau TE, Wessler SR. Stowaway: a new family of inverted repeat elements associated with the genes of both monocotyledonous and dicotyledonous plants. The Plant Cell. 6: 907-16. PMID 8061524 DOI: 10.1105/Tpc.6.6.907  0.688
1992 Bureau TE, Wessler SR. Tourist: a large family of small inverted repeat elements frequently associated with maize genes. The Plant Cell. 4: 1283-94. PMID 1332797 DOI: 10.1105/Tpc.4.10.1283  0.683
1992 Baran G, Echt C, Bureau T, Wessler S. Molecular analysis of the maize wx-B3 allele indicates that precise excision of the transposable Ac element is rare. Genetics. 130: 377-84. PMID 1311699  0.539
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