Alex Dornburg, Ph.D. - Publications

Affiliations: 
Yale University, New Haven, CT 
Area:
evolution, phylogenetics, ichthyology

63 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Lamb AD, Lippi CA, Watkins-Colwell GJ, Jones A, Warren DL, Iglesias TL, Brandley MC, Dornburg A. Comparing the dietary niche overlap and ecomorphological differences between invasive geckos and a native gecko competitor. Ecology and Evolution. 11: 18719-18732. PMID 35003704 DOI: 10.1002/ece3.8401  0.651
2021 Fisk JN, Mahal AR, Dornburg A, Gaffney SG, Aneja S, Contessa JN, Rimm D, Yu JB, Townsend JP. Premetastatic shifts of endogenous and exogenous mutational processes support consolidative therapy in EGFR-driven lung adenocarcinoma. Cancer Letters. PMID 34780851 DOI: 10.1016/j.canlet.2021.11.011  0.457
2021 Townsend JP, Hassler HB, Wang Z, Miura S, Singh J, Kumar S, Ruddle NH, Galvani AP, Dornburg A. The durability of immunity against reinfection by SARS-CoV-2: a comparative evolutionary study. The Lancet. Microbe. PMID 34632431 DOI: 10.1016/S2666-5247(21)00219-6  0.495
2021 Dornburg A, Wcisel DJ, Zapfe K, Ferraro E, Roupe-Abrams L, Thompson AW, Braasch I, Ota T, Yoder JA. Holosteans contextualize the role of the teleost genome duplication in promoting the rise of evolutionary novelties in the ray-finned fish innate immune system. Immunogenetics. PMID 34510270 DOI: 10.1007/s00251-021-01225-6  0.788
2021 Thompson AW, Hawkins MB, Parey E, Wcisel DJ, Ota T, Kawasaki K, Funk E, Losilla M, Fitch OE, Pan Q, Feron R, Louis A, Montfort J, Milhes M, Racicot BL, ... ... Dornburg A, et al. The bowfin genome illuminates the developmental evolution of ray-finned fishes. Nature Genetics. PMID 34462605 DOI: 10.1038/s41588-021-00914-y  0.335
2021 Warren DL, Eytan RI, Dornburg A, Iglesias TL, Brandley MC, Wainwright PC. Reevaluating claims of ecological speciation in . Ecology and Evolution. 11: 11449-11456. PMID 34429932 DOI: 10.1002/ece3.7936  0.593
2021 Parker E, Dornburg A, Struthers CD, Jones CD, Near TJ. Phylogenomic species delimitation dramatically reduces species diversity in an Antarctic adaptive radiation. Systematic Biology. PMID 34247239 DOI: 10.1093/sysbio/syab057  0.677
2020 Dornburg A, Wang Z, Wang J, Mo ES, Lopez-Giraldez F, Townsend JP. Comparative genomics within and across Bilaterians illuminates the evolutionary history of ALK and LTK proto-oncogene origination and diversification. Genome Biology and Evolution. PMID 33196781 DOI: 10.1093/gbe/evaa228  0.583
2020 Daane JM, Dornburg A, Smits P, MacGuigan DJ, Hawkins MB, Near TJ, Detrich HW, Harris MP. Author Correction: Historical contingency shapes adaptive radiation in Antarctic fishes. Nature Ecology & Evolution. PMID 32157252 DOI: 10.1038/S41559-020-1169-7  0.585
2019 Phillips AJ, Dornburg A, Zapfe KL, Anderson FE, James SW, Erséus C, Moriarty Lemmon E, Lemmon AR, Williams BW. Editor's Note: Phylogenomic Analysis of a Putative Missing Link Sparks Reinterpretation of Leech Evolution. Genome Biology and Evolution. 11: 3275. PMID 31882994 DOI: 10.1093/Gbe/Evz247  0.766
2019 Phillips AJ, Dornburg A, Zapfe KL, Anderson FE, James SW, Erséus C, Moriarty Lemmon E, Lemmon AR, Williams BW. Editor's Note: Phylogenomic Analysis of a Putative Missing Link Sparks Reinterpretation of Leech Evolution. Genome Biology and Evolution. 11: 3275. PMID 31758796 DOI: 10.1093/gbe/evz247  0.769
2019 Somarelli JA, Gardner H, Cannataro VL, Gunady EF, Boddy AM, Johnson NA, Fisk JN, Gaffney SG, Chuang JH, Li S, Ciccarelli FD, Panchenko AR, Megquier K, Kumar S, Dornburg A, et al. Molecular biology and evolution of cancer: from discovery to action. Molecular Biology and Evolution. PMID 31642480 DOI: 10.1093/Molbev/Msz242  0.565
2019 Phillips AJ, Dornburg A, Zapfe KL, Anderson FE, James SW, Erséus C, Moriarty Lemmon E, Lemmon AR, Williams BW. Expression of concern: Phylogenomic Analysis of a Putative Missing Link Sparks Reinterpretation of Leech Evolution. Genome Biology and Evolution. 11: 1882. PMID 31271441 DOI: 10.1093/Gbe/Evz145  0.753
2019 Phillips AJ, Dornburg A, Zapfe KL, Anderson FE, James SW, Erséus C, Moriarty Lemmon E, Lemmon AR, Williams BW. Phylogenomic Analysis of a Putative Missing Link Sparks Reinterpretation of Leech Evolution. Genome Biology and Evolution. PMID 31214691 DOI: 10.1093/Gbe/Evz120  0.817
2019 Daane JM, Dornburg A, Smits P, MacGuigan DJ, Brent Hawkins M, Near TJ, William Detrich Iii H, Harris MP. Historical contingency shapes adaptive radiation in Antarctic fishes. Nature Ecology & Evolution. PMID 31182814 DOI: 10.1038/S41559-019-0914-2  0.624
2019 Parker E, Dornburg A, Domínguez-Domínguez O, Piller KR. Assessing Phylogenetic Information to Reveal Uncertainty in Historical Data: An Example Using Goodeinae (Teleostei: Cyprinodontiformes: Goodeidae). Molecular Phylogenetics and Evolution. PMID 30731119 DOI: 10.1016/J.Ympev.2019.01.025  0.475
2019 Dornburg A, Lamb AD, Warren D, Watkins-Colwell GJ, Lewbart GA, Flowers J. Are Geckos Paratenic Hosts for Caribbean Island Acanthocephalans? Evidence from Gonatodes antillensis and a Global Review of Squamate Reptiles Acting as Transport Hosts Bulletin of the Peabody Museum of Natural History. 60: 55. DOI: 10.3374/014.060.0103  0.574
2019 Near TJ, Ghezelayagh A, Ojeda FP, Dornburg A. Recent diversification in an ancient lineage of Notothenioid fishes (Bovichtus: Notothenioidei) Polar Biology. 42: 943-952. DOI: 10.1007/S00300-019-02489-1  0.728
2018 Near TJ, MacGuigan DJ, Parker E, Struthers CD, Jones CD, Dornburg A. Phylogenetic analysis of Antarctic notothenioids illuminates the utility of RADseq for resolving Cenozoic adaptive radiations. Molecular Phylogenetics and Evolution. PMID 30195039 DOI: 10.1016/J.Ympev.2018.09.001  0.727
2018 Dornburg A, Su Z, Townsend JP. Optimal rates for phylogenetic inference and experimental design in the era of genome-scale datasets. Systematic Biology. PMID 29939341 DOI: 10.7490/F1000Research.1116969.1  0.573
2018 Iglesias TL, Dornburg A, Warren DL, Wainwright PC, Schmitz L, Economo EP. Eyes Wide Shut: The impact of dim-light vision on neural investment in marine teleosts. Journal of Evolutionary Biology. PMID 29808568 DOI: 10.1111/Jeb.13299  0.547
2018 Dornburg A, Warren DL, Zapfe KL, Morris R, Iglesias TL, Lamb A, Hogue G, Lukas L, Wong R. Testing ontogenetic patterns of sexual size dimorphism against expectations of the expensive tissue hypothesis, an intraspecific example using oyster toadfish (). Ecology and Evolution. 8: 3609-3616. PMID 29686842 DOI: 10.1002/Ece3.3835  0.738
2017 Dornburg A, Townsend JP, Wang Z. Maximizing Power in Phylogenetics and Phylogenomics: A Perspective Illuminated by Fungal Big Data. Advances in Genetics. 100: 1-47. PMID 29153398 DOI: 10.1016/Bs.Adgen.2017.09.007  0.631
2017 Dornburg A, Federman S, Lamb AD, Jones CD, Near TJ. Cradles and museums of Antarctic teleost biodiversity. Nature Ecology & Evolution. 1: 1379-1384. PMID 29046532 DOI: 10.1038/S41559-017-0239-Y  0.745
2017 Chakrabarty P, Faircloth BC, Alda F, Ludt WB, McMahan CD, Near TJ, Dornburg A, Albert JS, Arroyave J, Stiassny ML, Sorenson L, Alfaro ME. Phylogenomic Systematics of Ostariophysan fishes: Ultraconserved Elements Support the Surprising Non-monophyly of Characiformes. Systematic Biology. PMID 28334176 DOI: 10.1093/Sysbio/Syx038  0.69
2017 Dornburg A, Townsend JP, Brooks W, Spriggs E, Eytan RI, Moore JA, Wainwright PC, Lemmon A, Lemmon EM, Near TJ. New Insights on the Sister Lineage of Percomorph Fishes with an Anchored Hybrid Enrichment Dataset. Molecular Phylogenetics and Evolution. PMID 28254474 DOI: 10.1016/J.Ympev.2017.02.017  0.817
2017 Dornburg A, Forrestel E, Moore J, Iglesias T, Jones A, Rao L, Warren D. An assessment of sampling biases across studies of diel activity patterns in marine ray-finned fishes (Actinopterygii) Bulletin of Marine Science. 93: 611-639. DOI: 10.5343/Bms.2016.1016  0.448
2017 Lamb AD, Watkins-Colwell GJ, Moore JA, Warren DL, Iglesias TL, Brandley MC, Dornburg A. Endolymphatic Sac Use and Reproductive Activity in the Lesser Antilles Endemic GeckoGonatodes antillensis(Gekkota: Sphaerodactylidae) Bulletin of the Peabody Museum of Natural History. 58: 17-29. DOI: 10.3374/014.058.0103  0.648
2016 Dornburg A, Fisk JN, Tamagnan J, Townsend JP. PhyInformR: phylogenetic experimental design and phylogenomic data exploration in R. Bmc Evolutionary Biology. 16: 262. PMID 27905871 DOI: 10.1186/S12862-016-0837-3  0.573
2016 Collins S, Dornburg A, Flores JM, Dombrowski DS, Lewbart GA. A comparison of blood gases, biochemistry, and hematology to ecomorphology in a health assessment of pinfish (Lagodon rhomboides). Peerj. 4: e2262. PMID 27602261 DOI: 10.7717/Peerj.2262  0.401
2016 Dornburg A, Federman S, Eytan RI, Near TJ. Cryptic species diversity in Sub-Antarctic islands: A case study of Lepidonotothen. Molecular Phylogenetics and Evolution. PMID 27421566 DOI: 10.1016/J.Ympev.2016.07.013  0.698
2016 Federman S, Dornburg A, Daly DC, Downie A, Perry GH, Yoder AD, Sargis EJ, Richard AF, Donoghue MJ, Baden AL. Implications of lemuriform extinctions for the Malagasy flora. Proceedings of the National Academy of Sciences of the United States of America. PMID 27071108 DOI: 10.1073/Pnas.1523825113  0.358
2016 Dornburg A, Lippi C, Federman S, Moore JA, Warren DL, Iglesias TL, Brandley MC, Watkins-Colwell GJ, Lamb AD, Jones A. Disentangling the Influence of Urbanization and Invasion on Endemic Geckos in Tropical Biodiversity Hot Spots: A Case Study ofPhyllodactylus martini(Squamata: Phyllodactylidae) along an Urban Gradient in Curaçao Bulletin of the Peabody Museum of Natural History. 57: 147-164. DOI: 10.3374/014.057.0209  0.624
2016 Sah HHA, Grafe TU, Dornburg A, McLeod DS, Bauer AM, Wahab RA, Grismer L, Watkins-Colwell GJ. The Amphibians, Reptiles and Fishes of the 2012 Bukit Pagon Expedition, Brunei Darussalam Bulletin of the Peabody Museum of Natural History. 57: 97-114. DOI: 10.3374/014.057.0101  0.457
2015 Prum RO, Berv JS, Dornburg A, Field DJ, Townsend JP, Lemmon EM, Lemmon AR. A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing. Nature. 526: 569-73. PMID 26444237 DOI: 10.1038/Nature15697  0.687
2015 Federman S, Dornburg A, Downie A, Richard AF, Daly DC, Donoghue MJ. The biogeographic origin of a radiation of trees in Madagascar: implications for the assembly of a tropical forest biome. Bmc Evolutionary Biology. 15: 216. PMID 26437959 DOI: 10.1186/S12862-015-0483-1  0.41
2015 Eytan RI, Evans BR, Dornburg A, Lemmon AR, Lemmon EM, Wainwright PC, Near TJ. Are 100 enough? Inferring acanthomorph teleost phylogeny using Anchored Hybrid Enrichment. Bmc Evolutionary Biology. 15: 113. PMID 26071950 DOI: 10.1186/S12862-015-0415-0  0.734
2015 Near TJ, Dornburg A, Harrington RC, Oliveira C, Pietsch TW, Thacker CE, Satoh TP, Katayama E, Wainwright PC, Eastman JT, Beaulieu JM. Identification of the notothenioid sister lineage illuminates the biogeographic history of an Antarctic adaptive radiation. Bmc Evolutionary Biology. 15: 109. PMID 26062690 DOI: 10.1186/S12862-015-0362-9  0.822
2015 Dornburg A, Friedman M, Near TJ. Phylogenetic analysis of molecular and morphological data highlights uncertainty in the relationships of fossil and living species of Elopomorpha (Actinopterygii: Teleostei). Molecular Phylogenetics and Evolution. 89: 205-18. PMID 25899306 DOI: 10.1016/J.Ympev.2015.04.004  0.711
2015 Iglesias TL, Dornburg A, Brandley MC, Alfaro ME, Warren DL. Life in the unthinking depths: energetic constraints on encephalization in marine fishes. Journal of Evolutionary Biology. 28: 1080-90. PMID 25818759 DOI: 10.1111/Jeb.12631  0.318
2015 Dornburg A, Moore J, Beaulieu JM, Eytan RI, Near TJ. The impact of shifts in marine biodiversity hotspots on patterns of range evolution: Evidence from the Holocentridae (squirrelfishes and soldierfishes). Evolution; International Journal of Organic Evolution. 69: 146-61. PMID 25407924 DOI: 10.1111/Evo.12562  0.707
2015 Dornburg A, Eytan RI, Federman S, Pennington JN, Stewart AL, Jones CD, Near TJ. Molecular data support the existence of two species of the Antarctic fish genus Cryodraco (Channichthyidae) Polar Biology. 1-11. DOI: 10.1007/S00300-015-1859-9  0.693
2014 Dornburg A, Townsend JP, Friedman M, Near TJ. Phylogenetic informativeness reconciles ray-finned fish molecular divergence times. Bmc Evolutionary Biology. 14: 169. PMID 25103329 DOI: 10.1186/S12862-014-0169-0  0.713
2014 Near TJ, Dornburg A, Friedman M. Phylogenetic relationships and timing of diversification in gonorynchiform fishes inferred using nuclear gene DNA sequences (Teleostei: Ostariophysi). Molecular Phylogenetics and Evolution. 80: 297-307. PMID 25087656 DOI: 10.1016/J.Ympev.2014.07.013  0.681
2014 Price SA, Schmitz L, Oufiero CE, Eytan RI, Dornburg A, Smith WL, Friedman M, Near TJ, Wainwright PC. Two waves of colonization straddling the K-Pg boundary formed the modern reef fish fauna. Proceedings. Biological Sciences / the Royal Society. 281: 20140321. PMID 24695431 DOI: 10.1098/Rspb.2014.0321  0.734
2014 Near TJ, Dornburg A, Tokita M, Suzuki D, Brandley MC, Friedman M. Boom and bust: ancient and recent diversification in bichirs (Polypteridae: Actinopterygii), a relictual lineage of ray-finned fishes. Evolution; International Journal of Organic Evolution. 68: 1014-26. PMID 24274466 DOI: 10.1111/Evo.12323  0.715
2014 Moore JA, Dornburg A. Ingestion of fossil seashells, stones and small mammal bones by gravid gopher tortoises (Gopherus polyphemus) in South Florida Bulletin of the Peabody Museum of Natural History. 55: 55-63. DOI: 10.3374/014.055.0105  0.353
2013 Friedman M, Keck BP, Dornburg A, Eytan RI, Martin CH, Hulsey CD, Wainwright PC, Near TJ. Molecular and fossil evidence place the origin of cichlid fishes long after Gondwanan rifting. Proceedings. Biological Sciences / the Royal Society. 280: 20131733. PMID 24048155 DOI: 10.1098/Rspb.2013.1733  0.762
2013 Near TJ, Dornburg A, Eytan RI, Keck BP, Smith WL, Kuhn KL, Moore JA, Price SA, Burbrink FT, Friedman M, Wainwright PC. Phylogeny and tempo of diversification in the superradiation of spiny-rayed fishes. Proceedings of the National Academy of Sciences of the United States of America. 110: 12738-43. PMID 23858462 DOI: 10.1073/Pnas.1304661110  0.77
2013 Reynolds RG, Niemiller ML, Hedges SB, Dornburg A, Puente-Rolón AR, Revell LJ. Molecular phylogeny and historical biogeography of West Indian boid snakes (Chilabothrus). Molecular Phylogenetics and Evolution. 68: 461-70. PMID 23669009 DOI: 10.1016/J.Ympev.2013.04.029  0.759
2013 Santini F, Sorenson L, Marcroft T, Dornburg A, Alfaro ME. A multilocus molecular phylogeny of boxfishes (Aracanidae, Ostraciidae; Tetraodontiformes). Molecular Phylogenetics and Evolution. 66: 153-60. PMID 23036494 DOI: 10.1016/J.Ympev.2012.09.022  0.51
2012 Dornburg A, Moore JA, Webster R, Warren DL, Brandley MC, Iglesias TL, Wainwright PC, Near TJ. Molecular phylogenetics of squirrelfishes and soldierfishes (Teleostei: Beryciformes: Holocentridae): reconciling more than 100 years of taxonomic confusion. Molecular Phylogenetics and Evolution. 65: 727-38. PMID 22884866 DOI: 10.1016/J.Ympev.2012.07.020  0.771
2012 Near TJ, Eytan RI, Dornburg A, Kuhn KL, Moore JA, Davis MP, Wainwright PC, Friedman M, Smith WL. Resolution of ray-finned fish phylogeny and timing of diversification. Proceedings of the National Academy of Sciences of the United States of America. 109: 13698-703. PMID 22869754 DOI: 10.1073/Pnas.1206625109  0.756
2012 Near TJ, Dornburg A, Kuhn KL, Eastman JT, Pennington JN, Patarnello T, Zane L, Fernández DA, Jones CD. Ancient climate change, antifreeze, and the evolutionary diversification of Antarctic fishes. Proceedings of the National Academy of Sciences of the United States of America. 109: 3434-9. PMID 22331888 DOI: 10.1073/Pnas.1115169109  0.662
2012 Dornburg A, Brandley MC, McGowen MR, Near TJ. Relaxed clocks and inferences of heterogeneous patterns of nucleotide substitution and divergence time estimates across whales and dolphins (Mammalia: Cetacea). Molecular Biology and Evolution. 29: 721-36. PMID 21926070 DOI: 10.1093/Molbev/Msr228  0.599
2011 Dornburg A, Sidlauskas B, Santini F, Sorenson L, Near TJ, Alfaro ME. The influence of an innovative locomotor strategy on the phenotypic diversification of triggerfish (family: Balistidae). Evolution; International Journal of Organic Evolution. 65: 1912-26. PMID 21729047 DOI: 10.1111/J.1558-5646.2011.01275.X  0.659
2011 Dornburg A, Beaulieu JM, Oliver JC, Near TJ. Integrating fossil preservation biases in the selection of calibrations for molecular divergence time estimation. Systematic Biology. 60: 519-27. PMID 21436104 DOI: 10.1093/Sysbio/Syr019  0.62
2011 Dornburg A, Colosi JG, Maser C, Reese AT, Watkins-Colwell GJ. A survey of the yale peabody museum collection of egyptian mammals collected during construction of the aswan high dam, with an emphasis on material from the 1962-1965 yale university prehistoric expedition to Nubia Bulletin of the Peabody Museum of Natural History. 52: 255-272. DOI: 10.3374/014.052.0206  0.389
2011 Dornburg A, Warren DL, Iglesias T, Brandley MC. Natural history observations of the ichthyological and herpetological fauna on the island of Curaçao (Netherlands) Bulletin of the Peabody Museum of Natural History. 52: 181-186. DOI: 10.3374/014.052.0106  0.418
2010 Watkins-Colwell GJ, Dornburg A, Hawlena D, Moore JA. The amphibians and reptiles of the 1962-1965 Yale University Prehistoric Expedition to Nubia Bulletin of the Peabody Museum of Natural History. 51: 179-197. DOI: 10.3374/014.051.0204  0.463
2009 Alfaro ME, Santini F, Brock C, Alamillo H, Dornburg A, Rabosky DL, Carnevale G, Harmon LJ. Nine exceptional radiations plus high turnover explain species diversity in jawed vertebrates. Proceedings of the National Academy of Sciences of the United States of America. 106: 13410-4. PMID 19633192 DOI: 10.1073/Pnas.0811087106  0.544
2009 Dornburg A, Moore JA, Watkins-Colwell GJ. Distribution of Freshwater Fishes in Connecticut Based on Museum Voucher Specimens Bulletin of the Peabody Museum of Natural History. 50: 347-379. DOI: 10.3374/014.050.0204  0.44
2008 Dornburg A, Santini F, Alfaro ME. The influence of model averaging on clade posteriors: an example using the triggerfishes (Family Balistidae). Systematic Biology. 57: 905-19. PMID 19085332 DOI: 10.1080/10635150802562392  0.457
Show low-probability matches.