Alex Dornburg, Ph.D. - Related publications

Affiliations: 
Yale University, New Haven, CT 
Area:
evolution, phylogenetics, ichthyology
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Talavera G, Kaliszewska ZA, Heath A, Pierce NE. Recent diversification of Chrysoritis butterflies in the South African Cape (Lepidoptera: Lycaenidae). Molecular Phylogenetics and Evolution. 148: 106817. PMID 32289447 DOI: 10.1016/j.ympev.2020.106817   
2020 Kapli P, Yang Z, Telford MJ. Phylogenetic tree building in the genomic age. Nature Reviews. Genetics. PMID 32424311 DOI: 10.1038/s41576-020-0233-0   
2020 Bohlen J, Dvořák T, Šlechta V, Šlechtová V. Resolving an unnoticed diversity within the Schistura robertsi species complex (Teleostei: Nemacheilidae) using molecules and morphology. Molecular Phylogenetics and Evolution. 106894. PMID 32562824 DOI: 10.1016/j.ympev.2020.106894   
2020 Macias AM, Geiser DM, Stajich JE, Łukasik P, Veloso C, Bublitz DC, Berger MC, Boyce GR, Hodge K, Kasson MT. Evolutionary relationships among spp. (Entomophthorales), obligate pathogens of cicadas. Mycologia. 1-15. PMID 32412847 DOI: 10.1080/00275514.2020.1742033   
2020 Grosse M, Bakken T, Nygren A, Kongsrud JA, Capa M. Species delimitation analyses of NE Atlantic Chaetozone (Annelida, Cirratulidae) reveals hidden diversity among a common and abundant marine annelid. Molecular Phylogenetics and Evolution. 149: 106852. PMID 32417496 DOI: 10.1016/j.ympev.2020.106852   
2020 Loureiro LO, Engstrom MD, Lim BK. Optimization of Genotype by Sequencing data for phylogenetic purposes. Methodsx. 7: 100892. PMID 32373482 DOI: 10.1016/j.mex.2020.100892   
2020 Tilic E, Sayyari E, Stiller J, Mirarab S, Rouse GW. More is needed - Thousands of loci are required to elucidate the relationships of the 'flowers of the sea' (Sabellida, Annelida). Molecular Phylogenetics and Evolution. 106892. PMID 32562819 DOI: 10.1016/j.ympev.2020.106892   
2020 Hördt A, López MG, Meier-Kolthoff JP, Schleuning M, Weinhold LM, Tindall BJ, Gronow S, Kyrpides NC, Woyke T, Göker M. Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of . Frontiers in Microbiology. 11: 468. PMID 32373076 DOI: 10.3389/fmicb.2020.00468   
2020 Feng Y, Peter Comes H, Qiu YX. Phylogenomic insights into the temporal-spatial divergence history, evolution of leaf habit and hybridization in Stachyurus (Stachyuraceae). Molecular Phylogenetics and Evolution. 106878. PMID 32512196 DOI: 10.1016/j.ympev.2020.106878   
2020 Tyler McCraney W, Thacker CE, Alfaro ME. Supermatrix phylogeny resolves goby lineages and reveals unstable root of Gobiaria. Molecular Phylogenetics and Evolution. 106862. PMID 32473335 DOI: 10.1016/j.ympev.2020.106862   
2020 Bradshaw M, Braun U, Wang S, Liu S, Feng J, Shin HD, Choi YJ, Takamatsu S, Bulgakov TS, Tobin PC. Phylogeny and taxonomy of powdery mildew on species. Mycologia. 1-17. PMID 32374657 DOI: 10.1080/00275514.2020.1739508   
2020 Sun M, Folk RA, Gitzendanner MA, Soltis PS, Chen Z, Soltis DE, Guralnick RP. Estimating rates and patterns of diversification with incomplete sampling: a case study in the rosids. American Journal of Botany. PMID 32519354 DOI: 10.1002/ajb2.1479   
2020 Buckley M, Harvey VL, Orihuela J, Mychajliw AM, Keating J, Milan JNA, Lawless C, Chamberlain AT, Egerton VM, Manning PL. Collagen sequence analysis reveals evolutionary history of extinct West Indies Nesophontes ('island-shrews'). Molecular Biology and Evolution. PMID 32497204 DOI: 10.1093/molbev/msaa137   
2020 Pirani RM, Peloso PLV, Prado JR, Polo É, Lacey Knowles L, Ron SR, Rodrigues MT, Sturaro MJ, Werneck FP. Diversification History of Clown Tree Frogs in Neotropical Rainforests (Anura, Hylidae, Dendropsophus leucophyllatus group). Molecular Phylogenetics and Evolution. 106877. PMID 32512194 DOI: 10.1016/j.ympev.2020.106877   
2020 Zhang R, Zhou Y, Xiao N, Wang C. A new sponge-associated starfish, sp. nov. (Asteroidea: Brisingida: Brisingidae), from the northwestern Pacific seamounts. Peerj. 8: e9071. PMID 32518717 DOI: 10.7717/peerj.9071   
2020 Li Y, Guo XH, Lundholm N. Molecular phylogeny and taxonomy of the genus Minidiscus (Bacillariophyceae), with description of Mediolabrus gen. nov. Journal of Phycology. PMID 32510583 DOI: 10.1111/jpy.13038   
2020 Kim T, Lee Y, Kil HJ, Park JK. The mitochondrial genome of (Cephalobomorpha) confirms non-monophyly of Tylenchina (Nematoda). Peerj. 8: e9108. PMID 32440374 DOI: 10.7717/peerj.9108   
2020 Niu W, Xiao J, Tian P, Guo F. The complete mitochondrial genome of (Scleractinia, Plesiastreidae) sheds light on its phylogeny and taxonomy of the family Plesiastreidae. Saudi Journal of Biological Sciences. 27: 1830-1834. PMID 32565703 DOI: 10.1016/j.sjbs.2020.04.041   
2020 Su L, Zhu H, Niu Y, Guo Y, Du X, Guo J, Zhang L, Qin C. Phylogeny and taxonomic revision of Kernia and Acaulium. Scientific Reports. 10: 10302. PMID 32587321 DOI: 10.1038/s41598-020-67347-1   
2020 Schwartsburd PB, Perrie LR, Brownsey P, Shepherd LD, Shang H, Barrington DS, Sundue MA. New insights into the evolution of the fern family dennstaedtiaceae from an expanded molecular phylogeny and morphological analysis. Molecular Phylogenetics and Evolution. 106881. PMID 32512193 DOI: 10.1016/j.ympev.2020.106881   
2020 Chagas ATA, Ludwig S, Pimentel JDSM, de Abreu NL, Nunez-Rodriguez DL, Leal HG, Kalapothakis E. Use of complete mitochondrial genome sequences to identify barcoding markers for groups with low genetic distance. Mitochondrial Dna. Part a, Dna Mapping, Sequencing, and Analysis. 1-8. PMID 32314625 DOI: 10.1080/24701394.2020.1748609   
2020 Wang P, Che J, Liu Q, Li K, Jin JQ, Jiang K, Shi L, Guo P. A revised taxonomy of Asian snail-eating snakes (Squamata, Pareidae): evidence from morphological comparison and molecular phylogeny. Zookeys. 939: 45-64. PMID 32577082 DOI: 10.3897/zookeys.939.49309   
2020 Tanaka M, Kumakura D, Mino S, Doi H, Ogura Y, Hayashi T, Yumoto I, Cai M, Zhou YG, Gomez-Gil B, Araki T, Sawabe T. Genomic characterization of closely related species in the Rumoiensis clade infers ecogenomic signatures to non-marine environments. Environmental Microbiology. PMID 32383332 DOI: 10.1111/1462-2920.15062   
2020 Newton LG, Starrett J, Hendrixson BE, Derkarabetian S, Bond JE. Integrative species delimitation reveals cryptic diversity in the southern Appalachian Antrodiaetus unicolor (Araneae: Antrodiaetidae) species complex. Molecular Ecology. PMID 32452095 DOI: 10.1111/mec.15483   
2020 Servis JA, Reid BN, Timmers MA, Stergioula V, Naro-Maciel E. Characterizing coral reef biodiversity: genetic species delimitation in brachyuran crabs of Palmyra Atoll, Central Pacific. Mitochondrial Dna. Part a, Dna Mapping, Sequencing, and Analysis. 1-12. PMID 32500776 DOI: 10.1080/24701394.2020.1769087   
2020 Menezes RST, Lloyd MW, Brady SG. Phylogenomics indicates Amazonia as the major source of Neotropical swarm-founding social wasp diversity. Proceedings. Biological Sciences. 287: 20200480. PMID 32486978 DOI: 10.1098/rspb.2020.0480   
2020 Xu L, Liu P, Wang X, Van Damme K, Du F. Phylogenetic relationships and cryptic species in the genus Sthenoteuthis (Cephalopoda: Ommastrephidae) in the South China Sea. Molecular Phylogenetics and Evolution. 106846. PMID 32380284 DOI: 10.1016/j.ympev.2020.106846   
2020 Patterson BD, Webala PW, Lavery TH, Agwanda BR, Goodman SM, Peterhans JCK, Demos TC. Evolutionary relationships and population genetics of the Afrotropical leaf-nosed bats (Chiroptera, Hipposideridae). Zookeys. 929: 117-161. PMID 32390744 DOI: 10.3897/zookeys.929.50240   
2020 Ramírez-Reyes T, Blair C, Flores-Villela O, Piñero D, Lathrop A, Murphy R. Phylogenomics and molecular species delimitation reveals great cryptic diversity of leaf-toed geckos (Phyllodactylidae: Phyllodactylus), ancient origins, and diversification in Mexico. Molecular Phylogenetics and Evolution. 106880. PMID 32512192 DOI: 10.1016/j.ympev.2020.106880   
2020 Araujo Argolo L, López-Fernández H, Batalha-Filho H, Roberto Antunes de Mello Affonso P. Unraveling the systematics and evolution of the 'Geophagus' brasiliensis (Cichliformes: Cichlidae) species complex. Molecular Phylogenetics and Evolution. 106855. PMID 32442518 DOI: 10.1016/j.ympev.2020.106855   
2020 Persson NL, Toresen I, Andersen HL, Smedmark JEE, Eriksson T. Detecting destabilizing species in the phylogenetic backbone of (Rosaceae) using low-copy nuclear markers. Aob Plants. 12: plaa017. PMID 32547721 DOI: 10.1093/aobpla/plaa017   
2020 Pozzi L, Penna A, Bearder SK, Karlsson J, Perkin A, Disotell TR. Cryptic diversity and species boundaries within the Paragalago zanzibaricus species complex. Molecular Phylogenetics and Evolution. 150: 106887. PMID 32534184 DOI: 10.1016/j.ympev.2020.106887   
2020 Zhou M, Yang G, Sun G, Guo Z, Gong X, Pan Y. Resolving complicated relationships of the Panax bipinnatifidus complex in southwestern China by RAD-seq data. Molecular Phylogenetics and Evolution. 106851. PMID 32438045 DOI: 10.1016/j.ympev.2020.106851   
2020 Strijk JS, Binh HT, Ngoc NV, Pereira JT, Slik JWF, Sukri RS, Suyama Y, Tagane S, Wieringa JJ, Yahara T, Hinsinger DD. Museomics for reconstructing historical floristic exchanges: Divergence of stone oaks across Wallacea. Plos One. 15: e0232936. PMID 32442164 DOI: 10.1371/journal.pone.0232936   
2020 Weaver S, Shepard DB, Kozak KH. Developmental life history is associated with variation in rates of climatic niche evolution in a salamander adaptive radiation. Evolution; International Journal of Organic Evolution. PMID 32323308 DOI: 10.1111/evo.13949   
2020 Bray RA, Waeschenbach A, Littlewood DTJ, Halvorsen O, Olson PD. Molecular circumscription of new species of Gyrocotyle Diesing, 1850 (Cestoda) from deep-sea chimaeriform holocephalans in the North Atlantic. Systematic Parasitology. 97: 285-296. PMID 32328809 DOI: 10.1007/s11230-020-09912-w   
2020 Rangel-Medrano JD, Ortega-Lara A, Márquez EJ. Ancient genetic divergence in bumblebee catfish of the genus (Pseudopimelodidae: Siluriformes) from northwestern South America. Peerj. 8: e9028. PMID 32537262 DOI: 10.7717/peerj.9028   
2020 Liu B, Hu Y, Hu Z, Liu G, Zhu H. Taxonomic scheme of the order Chaetophorales (Chlorophyceae, Chlorophyta) based on chloroplast genomes. Bmc Genomics. 21: 442. PMID 32590931 DOI: 10.1186/s12864-020-06845-y   
2020 Morel B, Kozlov AM, Stamatakis A, Szöllősi GJ. GeneRax: A tool for species tree-aware maximum likelihood based gene family tree inference under gene duplication, transfer, and loss. Molecular Biology and Evolution. PMID 32502238 DOI: 10.1093/molbev/msaa141   
2020 Santillán-Guayasamín S, Barnabé C, Magallón-Gastelum E, Waleckx E, Yumiseva CA, Grijalva MJ, Villacís AG, Brenière SF. Molecular data supports monophyly of Triatoma dispar complex within genus Triatoma. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 104429. PMID 32565363 DOI: 10.1016/j.meegid.2020.104429   
2020 Xu X, Kuntner M, Bond JE, Ono H, Ho SYW, Liu F, Yu L, Li D. Molecular species delimitation in the primitively segmented spider genus Heptathela endemic to Japanese islands. Molecular Phylogenetics and Evolution. 106900. PMID 32599078 DOI: 10.1016/j.ympev.2020.106900   
2020 Chen, Liu Y, Davison G, Li Yong D, Gao S, Hu J, Li SH, Zhang Z. Disentangling the evolutionary history and biogeography of hill partridges (Phasianidae, Arborophila) from low coverage shotgun sequences. Molecular Phylogenetics and Evolution. 106895. PMID 32562823 DOI: 10.1016/j.ympev.2020.106895   
2020 Zhang Y, Huang S, Liang D, Wang H, Zhang P. A multilocus analysis of Epicopeiidae (Lepidoptera, Geometroidea) provides new insights into their relationships and the evolutionary history of mimicry. Molecular Phylogenetics and Evolution. 106847. PMID 32380285 DOI: 10.1016/j.ympev.2020.106847   
2020 Vasilikopoulos A, Misof B, Meusemann K, Lieberz D, Flouri T, Beutel RG, Niehuis O, Wappler T, Rust J, Peters RS, Donath A, Podsiadlowski L, Mayer C, Bartel D, Böhm A, et al. An integrative phylogenomic approach to elucidate the evolutionary history and divergence times of Neuropterida (Insecta: Holometabola). Bmc Evolutionary Biology. 20: 64. PMID 32493355 DOI: 10.1186/s12862-020-01631-6   
2020 Onn Chan K, Hutter CR, Wood PL, Lee Grismer L, Brown RM. Larger, unfiltered datasets are more effective at resolving phylogenetic conflict: Introns, exons, and UCEs resolve ambiguities in Golden-backed frogs (Anura: Ranidae; genus Hylarana). Molecular Phylogenetics and Evolution. 106899. PMID 32590046 DOI: 10.1016/j.ympev.2020.106899   
2020 Chamberland L, Salgado-Roa FC, Basco A, Crastz-Flores A, Binford GJ, Agnarsson I. Phylogeography of the widespread Caribbean spiny orb weaver . Peerj. 8: e8976. PMID 32391201 DOI: 10.7717/peerj.8976   
2020 Yang X, Xie DF, Chen JP, Zhou SD, Yu Y, He XJ. Comparative Analysis of the Complete Chloroplast Genomes in Subgenus (Amaryllidaceae): Phylogenetic Relationship and Adaptive Evolution. Biomed Research International. 2020: 1732586. PMID 32420321 DOI: 10.1155/2020/1732586   
2020 Khan KB, Praba L, Abdul Jaffar Ali H. Biological identification of ascidians from Vizhinjam Bay, southwest Coast of India using CO1 gene sequences. Mitochondrial Dna. Part a, Dna Mapping, Sequencing, and Analysis. 1-9. PMID 32516069 DOI: 10.1080/24701394.2020.1772248   
2020 Naka LN, Pil MW. Moving beyond the riverine barrier vicariant paradigm. Molecular Ecology. PMID 32392379 DOI: 10.1111/mec.15465   
2020 Parslow BA, Schwarz M, Stevens M. Molecular diversity and species delimitation in the family Gasteruptiidae (Hymenoptera: Evanioidea). Genome. PMID 32413273 DOI: 10.1139/gen-2019-0186