Christian R. Landry, Ph.D. - Publications

Affiliations: 
Harvard University, Cambridge, MA, United States 
Area:
evolutionary biology, molecular genetics

72 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Filteau M, Hamel V, Landry CR. [Wine yeast as a model for the study of human genes and diseases and their personalized effects]. MéDecine Sciences : M/S. 32: 332-4. PMID 27137687 DOI: 10.1051/medsci/20163204007  1
2015 Filteau M, Vignaud H, Rochette S, Diss G, Chrétien AÈ, Berger CM, Landry CR. Multi-scale perturbations of protein interactomes reveal their mechanisms of regulation, robustness and insights into genotype-phenotype maps. Briefings in Functional Genomics. PMID 26476431 DOI: 10.1093/bfgp/elv043  1
2015 Nigg M, Laroche J, Landry CR, Bernier L. RNAseq Analysis Highlights Specific Transcriptome Signatures of Yeast and Mycelial Growth Phases in the Dutch Elm Disease Fungus Ophiostoma novo-ulmi. G3 (Bethesda, Md.). PMID 26384770 DOI: 10.1534/g3.115.021022  1
2015 Freel KC, Charron G, Leducq JB, Landry CR, Schacherer J. Lachancea quebecensis sp. nov., a yeast species consistently isolated from tree bark in the Canadian province of Québec. International Journal of Systematic and Evolutionary Microbiology. PMID 26297665 DOI: 10.1099/ijsem.0.000426  1
2015 Torres-Quiroz F, Filteau M, Landry CR. Feedback regulation between autophagy and PKA. Autophagy. 11: 1181-3. PMID 26046386 DOI: 10.1080/15548627.2015.1055440  1
2015 Hebert FO, Phelps L, Samonte I, Panchal M, Grambauer S, Barber I, Kalbe M, Landry CR, Aubin-Horth N. Identification of candidate mimicry proteins involved in parasite-driven phenotypic changes. Parasites & Vectors. 8: 225. PMID 25888917 DOI: 10.1186/s13071-015-0834-1  1
2015 Rochette S, Diss G, Filteau M, Leducq JB, Dubé AK, Landry CR. Genome-wide protein-protein interaction screening by protein-fragment complementation assay (PCA) in living cells. Journal of Visualized Experiments : Jove. PMID 25867901 DOI: 10.3791/52255  1
2015 Filteau M, Diss G, Torres-Quiroz F, Dubé AK, Schraffl A, Bachmann VA, Gagnon-Arsenault I, Chrétien AÈ, Steunou AL, Dionne U, Côté J, Bisson N, Stefan E, Landry CR. Systematic identification of signal integration by protein kinase A. Proceedings of the National Academy of Sciences of the United States of America. 112: 4501-6. PMID 25831502 DOI: 10.1073/pnas.1409938112  1
2015 Landry CR, Zhong X, Nielly-Thibault L, Roucou X. Found in translation: functions and evolution of a recently discovered alternative proteome. Current Opinion in Structural Biology. 32: 74-80. PMID 25795211 DOI: 10.1016/j.sbi.2015.02.017  1
2015 Samani P, Low-Decarie E, McKelvey K, Bell T, Burt A, Koufopanou V, Landry CR, Bell G. Metabolic variation in natural populations of wild yeast. Ecology and Evolution. 5: 722-32. PMID 25691993 DOI: 10.1002/ece3.1376  1
2015 Stockwell SR, Landry CR, Rifkin SA. The yeast galactose network as a quantitative model for cellular memory. Molecular Biosystems. 11: 28-37. PMID 25328105 DOI: 10.1039/c4mb00448e  1
2015 Filteau M, Hamel V, Pouliot MC, Gagnon-Arsenault I, Dubé AK, Landry CR. Evolutionary rescue by compensatory mutations is constrained by genomic and environmental backgrounds Molecular Systems Biology. 11. DOI: 10.15252/msb.20156444  1
2015 Eberlein C, Leducq JB, Landry CR. The genomics of wild yeast populations sheds light on the domestication of man's best (micro) friend Molecular Ecology. 24: 5309-5311. DOI: 10.1111/mec.13380  1
2015 Boutchueng-Djidjou M, Collard-Simard G, Fortier S, Hébert SS, Kelly I, Landry CR, Faure RL. The last enzyme of the de novo purine synthesis pathway 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase (ATIC) plays a central role in insulin signaling and the golgi/endosomes protein network Molecular and Cellular Proteomics. 14: 1079-1092. DOI: 10.1074/mcp.M114.047159  1
2014 Nguyen Ba AN, Strome B, Hua JJ, Desmond J, Gagnon-Arsenault I, Weiss EL, Landry CR, Moses AM. Detecting functional divergence after gene duplication through evolutionary changes in posttranslational regulatory sequences. Plos Computational Biology. 10: e1003977. PMID 25474245 DOI: 10.1371/journal.pcbi.1003977  1
2014 Landry CR, Freschi L, Zarin T, Moses AM. Turnover of protein phosphorylation evolving under stabilizing selection. Frontiers in Genetics. 5: 245. PMID 25101120 DOI: 10.3389/fgene.2014.00245  1
2014 Charron G, Leducq JB, Landry CR. Chromosomal variation segregates within incipient species and correlates with reproductive isolation. Molecular Ecology. 23: 4362-72. PMID 25039979 DOI: 10.1111/mec.12864  1
2014 Goldman A, Roy J, Bodenmiller B, Wanka S, Landry CR, Aebersold R, Cyert MS. The calcineurin signaling network evolves via conserved kinase-phosphatase modules that transcend substrate identity. Molecular Cell. 55: 422-35. PMID 24930733 DOI: 10.1016/j.molcel.2014.05.012  1
2014 Freschi L, Osseni M, Landry CR. Functional divergence and evolutionary turnover in mammalian phosphoproteomes. Plos Genetics. 10: e1004062. PMID 24465218 DOI: 10.1371/journal.pgen.1004062  1
2014 Leducq JB, Charron G, Samani P, Dubé AK, Sylvester K, James B, Almeida P, Sampaio JP, Hittinger CT, Bell G, Landry CR. Local climatic adaptation in a widespread microorganism. Proceedings. Biological Sciences / the Royal Society. 281: 20132472. PMID 24403328 DOI: 10.1098/rspb.2013.2472  1
2014 Diss G, Ascencio D, DeLuna A, Landry CR. Molecular mechanisms of paralogous compensation and the robustness of cellular networks. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. 322: 488-99. PMID 24376223 DOI: 10.1002/jez.b.22555  1
2014 Landry CR, Aubin-Horth N. Recent advances in ecological genomics: from phenotypic plasticity to convergent and adaptive evolution and speciation. Advances in Experimental Medicine and Biology. 781: 1-5. PMID 24277292 DOI: 10.1007/978-94-007-7347-9_1  1
2014 Rochette S, Gagnon-Arsenault I, Diss G, Landry CR. Modulation of the yeast protein interactome in response to DNA damage. Journal of Proteomics. 100: 25-36. PMID 24262151 DOI: 10.1016/j.jprot.2013.11.007  1
2014 Charron G, Leducq JB, Bertin C, Dubé AK, Landry CR. Exploring the northern limit of the distribution of Saccharomyces cerevisiae and Saccharomyces paradoxus in North America. Fems Yeast Research. 14: 281-8. PMID 24119009 DOI: 10.1111/1567-1364.12100  1
2013 Landry CR, Levy ED, Abd Rabbo D, Tarassov K, Michnick SW. Extracting insight from noisy cellular networks. Cell. 155: 983-9. PMID 24267884 DOI: 10.1016/j.cell.2013.11.003  1
2013 Diss G, Dubé AK, Boutin J, Gagnon-Arsenault I, Landry CR. A systematic approach for the genetic dissection of protein complexes in living cells. Cell Reports. 3: 2155-67. PMID 23746448 DOI: 10.1016/j.celrep.2013.05.004  1
2013 Diss G, Filteau M, Freschi L, Leducq JB, Rochette S, Torres-Quiroz F, Landry CR. Integrative avenues for exploring the dynamics and evolution of protein interaction networks. Current Opinion in Biotechnology. 24: 775-83. PMID 23571097 DOI: 10.1016/j.copbio.2013.02.023  1
2013 Verta JP, Landry CR, Mackay JJ. Are long-lived trees poised for evolutionary change? Single locus effects in the evolution of gene expression networks in spruce. Molecular Ecology. 22: 2369-79. PMID 23294325 DOI: 10.1111/mec.12189  1
2013 Freschi L, Torres-Quiroz F, Dubé AK, Landry CR. qPCA: a scalable assay to measure the perturbation of protein-protein interactions in living cells. Molecular Biosystems. 9: 36-43. PMID 23099892 DOI: 10.1039/c2mb25265a  1
2013 Gagnon-Arsenault I, Marois Blanchet FC, Rochette S, Diss G, Dubé AK, Landry CR. Transcriptional divergence plays a role in the rewiring of protein interaction networks after gene duplication. Journal of Proteomics. 81: 112-25. PMID 23063722 DOI: 10.1016/j.jprot.2012.09.038  1
2012 Leducq JB, Charron G, Diss G, Gagnon-Arsenault I, Dubé AK, Landry CR. Evidence for the robustness of protein complexes to inter-species hybridization. Plos Genetics. 8: e1003161. PMID 23300466 DOI: 10.1371/journal.pgen.1003161  1
2012 Goyette G, Boulais J, Carruthers NJ, Landry CR, Jutras I, Duclos S, Dermine JF, Michnick SW, LaBoissière S, Lajoie G, Barreiro L, Thibault P, Desjardins M. Proteomic characterization of phagosomal membrane microdomains during phagolysosome biogenesis and evolution. Molecular & Cellular Proteomics : McP. 11: 1365-77. PMID 22915823 DOI: 10.1074/mcp.M112.021048  1
2012 Pavey SA, Bernatchez L, Aubin-Horth N, Landry CR. What is needed for next-generation ecological and evolutionary genomics? Trends in Ecology & Evolution. 27: 673-8. PMID 22902072 DOI: 10.1016/j.tree.2012.07.014  1
2012 Levy ED, Michnick SW, Landry CR. Protein abundance is key to distinguish promiscuous from functional phosphorylation based on evolutionary information. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 367: 2594-606. PMID 22889910 DOI: 10.1098/rstb.2012.0078  1
2012 Landry CR, Rifkin SA. The genotype-phenotype maps of systems biology and quantitative genetics: distinct and complementary. Advances in Experimental Medicine and Biology. 751: 371-98. PMID 22821467 DOI: 10.1007/978-1-4614-3567-9_17  1
2012 Landry C, Tremblay L. Compositional differences between size classes of dissolved organic matter from freshwater and seawater revealed by an HPLC-FTIR system Environmental Science and Technology. 46: 1700-1707. PMID 22216934 DOI: 10.1021/es203711v  1
2012 Lee S, Thebault P, Freschi L, Beaufils S, Blundell TL, Landry CR, Bolanos-Garcia VM, Elowe S. Characterization of spindle checkpoint kinase Mps1 reveals domain with functional and structural similarities to tetratricopeptide repeat motifs of Bub1 and BubR1 checkpoint kinases. The Journal of Biological Chemistry. 287: 5988-6001. PMID 22187426 DOI: 10.1074/jbc.M111.307355  1
2011 Michnick SW, Ear PH, Landry C, Malleshaiah MK, Messier V. Protein-fragment complementation assays for large-scale analysis, functional dissection and dynamic studies of protein-protein interactions in living cells. Methods in Molecular Biology (Clifton, N.J.). 756: 395-425. PMID 21870242 DOI: 10.1007/978-1-61779-160-4_25  1
2011 Landry CR. Cell biology. A cellular roadmap for the plant kingdom. Science (New York, N.Y.). 333: 532-3. PMID 21798921 DOI: 10.1126/science.1209753  1
2011 Freschi L, Courcelles M, Thibault P, Michnick SW, Landry CR. Phosphorylation network rewiring by gene duplication. Molecular Systems Biology. 7: 504. PMID 21734643 DOI: 10.1038/msb.2011.43  1
2010 Landry CR, Rifkin SA. Chromatin regulators shape the genotype-phenotype map. Molecular Systems Biology. 6: 434. PMID 21119628 DOI: 10.1038/msb.2010.97  1
2010 Landry CR, Aubin-Horth N. Gene network architecture as a canvas for the interpretation of ecological genomics investigations. Molecular Ecology. 19: 5084-5. PMID 21091660 DOI: 10.1111/j.1365-294X.2010.04830.x  1
2010 Boulais J, Trost M, Landry CR, Dieckmann R, Levy ED, Soldati T, Michnick SW, Thibault P, Desjardins M. Molecular characterization of the evolution of phagosomes. Molecular Systems Biology. 6: 423. PMID 20959821 DOI: 10.1038/msb.2010.80  1
2010 Michnick SW, Ear PH, Landry C, Malleshaiah MK, Messier V. A toolkit of protein-fragment complementation assays for studying and dissecting large-scale and dynamic protein-protein interactions in living cells. Methods in Enzymology. 470: 335-68. PMID 20946817 DOI: 10.1016/S0076-6879(10)70014-8  1
2010 Moses AM, Landry CR. Moving from transcriptional to phospho-evolution: generalizing regulatory evolution? Trends in Genetics : Tig. 26: 462-7. PMID 20817339 DOI: 10.1016/j.tig.2010.08.002  1
2010 Levy ED, Landry CR, Michnick SW. Cell signaling. Signaling through cooperation. Science (New York, N.Y.). 328: 983-4. PMID 20489011 DOI: 10.1126/science.1190993  1
2010 Fontanillas P, Landry CR, Wittkopp PJ, Russ C, Gruber JD, Nusbaum C, Hartl DL. Key considerations for measuring allelic expression on a genomic scale using high-throughput sequencing. Molecular Ecology. 19: 212-27. PMID 20331781 DOI: 10.1111/j.1365-294X.2010.04472.x  1
2009 Landry CR, Levy ED, Michnick SW. Weak functional constraints on phosphoproteomes. Trends in Genetics : Tig. 25: 193-7. PMID 19349092 DOI: 10.1016/j.tig.2009.03.003  1
2009 Levy ED, Landry CR, Michnick SW. How perfect can protein interactomes be? Science Signaling. 2: pe11. PMID 19261595 DOI: 10.1126/scisignal.260pe11  1
2009 Landry CR. Systems biology spins off a new model for the study of canalization. Trends in Ecology & Evolution. 24: 63-6. PMID 19100652 DOI: 10.1016/j.tree.2008.10.004  1
2008 Cheung V, Chua G, Batada NN, Landry CR, Michnick SW, Hughes TR, Winston F. Chromatin- and transcription-related factors repress transcription from within coding regions throughout the Saccharomyces cerevisiae genome. Plos Biology. 6: e277. PMID 18998772 DOI: 10.1371/journal.pbio.0060277  1
2008 Lynch M, Sung W, Morris K, Coffey N, Landry CR, Dopman EB, Dickinson WJ, Okamoto K, Kulkarni S, Hartl DL, Thomas WK. A genome-wide view of the spectrum of spontaneous mutations in yeast. Proceedings of the National Academy of Sciences of the United States of America. 105: 9272-7. PMID 18583475 DOI: 10.1073/pnas.0803466105  1
2008 Tarassov K, Messier V, Landry CR, Radinovic S, Serna Molina MM, Shames I, Malitskaya Y, Vogel J, Bussey H, Michnick SW. An in vivo map of the yeast protein interactome. Science (New York, N.Y.). 320: 1465-70. PMID 18467557 DOI: 10.1126/science.1153878  1
2008 Brown KM, Landry CR, Hartl DL, Cavalieri D. Cascading transcriptional effects of a naturally occurring frameshift mutation in Saccharomyces cerevisiae. Molecular Ecology. 17: 2985-97. PMID 18422925 DOI: 10.1111/j.1365-294X.2008.03765.x  1
2007 Stefan E, Aquin S, Berger N, Landry CR, Nyfeler B, Bouvier M, Michnick SW. Quantification of dynamic protein complexes using Renilla luciferase fragment complementation applied to protein kinase A activities in vivo. Proceedings of the National Academy of Sciences of the United States of America. 104: 16916-21. PMID 17942691 DOI: 10.1073/pnas.0704257104  1
2007 Landry CR, Aubin-Horth N. Ecological annotation of genes and genomes through ecological genomics. Molecular Ecology. 16: 4419-21. PMID 17883391 DOI: 10.1111/j.1365-294X.2007.03504.x  1
2007 Landry CR, Hartl DL, Ranz JM. Genome clashes in hybrids: insights from gene expression. Heredity. 99: 483-93. PMID 17687247 DOI: 10.1038/sj.hdy.6801045  1
2007 Salathia N, Lee HN, Sangster TA, Morneau K, Landry CR, Schellenberg K, Behere AS, Gunderson KL, Cavalieri D, Jander G, Queitsch C. Indel arrays: an affordable alternative for genotyping. The Plant Journal : For Cell and Molecular Biology. 51: 727-37. PMID 17645438 DOI: 10.1111/j.1365-313X.2007.03194.x  1
2007 Landry CR, Lemos B, Rifkin SA, Dickinson WJ, Hartl DL. Genetic properties influencing the evolvability of gene expression. Science (New York, N.Y.). 317: 118-21. PMID 17525304 DOI: 10.1126/science.1140247  1
2007 Landry CR, Castillo-Davis CI, Ogura A, Liu JS, Hartl DL. Systems-level analysis and evolution of the phototransduction network in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 104: 3283-8. PMID 17360639 DOI: 10.1073/pnas.0611402104  1
2006 Landry CR, Townsend JP, Hartl DL, Cavalieri D. Ecological and evolutionary genomics of Saccharomyces cerevisiae. Molecular Ecology. 15: 575-91. PMID 16499686 DOI: 10.1111/j.1365-294X.2006.02778.x  1
2006 Landry CR, Oh J, Hartl DL, Cavalieri D. Genome-wide scan reveals that genetic variation for transcriptional plasticity in yeast is biased towards multi-copy and dispensable genes. Gene. 366: 343-51. PMID 16427747 DOI: 10.1016/j.gene.2005.10.042  1
2005 Giuntini E, Mengoni A, De Filippo C, Cavalieri D, Aubin-Horth N, Landry CR, Becker A, Bazzicalupo M. Large-scale genetic variation of the symbiosis-required megaplasmid pSymA revealed by comparative genomic analysis of Sinorhizobium meliloti natural strains. Bmc Genomics. 6: 158. PMID 16283928 DOI: 10.1186/1471-2164-6-158  1
2005 Landry CR, Wittkopp PJ, Taubes CH, Ranz JM, Clark AG, Hartl DL. Compensatory cis-trans evolution and the dysregulation of gene expression in interspecific hybrids of Drosophila. Genetics. 171: 1813-22. PMID 16143608 DOI: 10.1534/genetics.105.047449  1
2005 Aubin-Horth N, Landry CR, Letcher BH, Hofmann HA. Alternative life histories shape brain gene expression profiles in males of the same population. Proceedings. Biological Sciences / the Royal Society. 272: 1655-62. PMID 16087419 DOI: 10.1098/rspb.2005.3125  1
2003 Bernatchez L, Landry C. MHC studies in nonmodel vertebrates: What have we learned about natural selection in 15 years? Journal of Evolutionary Biology. 16: 363-377. PMID 14635837 DOI: 10.1046/j.1420-9101.2003.00531.x  1
2003 Landry C, Geyer LB, Arakaki Y, Uehara T, Palumbi SR. Recent speciation in the Indo-West Pacific: rapid evolution of gamete recognition and sperm morphology in cryptic species of sea urchin. Proceedings. Biological Sciences / the Royal Society. 270: 1839-47. PMID 12964987 DOI: 10.1098/rspb.2003.2395  1
2001 Landry C, Bernatchez L. Comparative analysis of population structure across environments and geographical scales at major histocompatibility complex and microsatellite loci in Atlantic salmon (Salmo salar) Molecular Ecology. 10: 2525-2539. PMID 11742552 DOI: 10.1046/j.1365-294X.2001.01383.x  1
2001 Landry C, Garant D, Duchesne P, Bernatchez L. 'Good genes as heterozygosity': The major histocompatibility complex and mate choice in Atlantic salmon (Salmo salar) Proceedings of the Royal Society B: Biological Sciences. 268: 1279-1285. PMID 11410155 DOI: 10.1098/rspb.2001.1659  1
1994 Landry C, Huet C, Mangeat P, Sahuquet A, Louvard D, Crine P. Comparative analysis of neutral endopeptidase (NEP) and villin gene expression during mouse embryogenesis and enterocyte maturation. Differentiation; Research in Biological Diversity. 56: 55-65. PMID 8026647  1
1993 Landry C, Santagata P, Bawab W, Fournie-Zaluski MC, Roques BP, Vinay P, Crine P. Characterization of neutral endopeptidase 24.11 in dog glomeruli Biochemical Journal. 291: 773-779. PMID 8489505  1
1992 Landry C, Crine P, DesGroseillers L. Differential expression of neuropeptide gene mRNA within the LUQ cells of Aplysia californica Journal of Neurobiology. 23: 89-101. PMID 1564457  1
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