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D. Allan Drummond, Ph.D. - Publications

Affiliations: 
2002-2006 California Institute of Technology, Pasadena, CA 
 2006-2011 FAS Center for Systems Biology Harvard University, Cambridge, MA, United States 
 2011- Biochemistry and Molecular Biology University of Chicago, Chicago, IL 
Area:
stress responses, phase separation, molecular evolution, biochemistry, cell biology
Website:
https://biologicalsciences.uchicago.edu/faculty/david-drummond-phd
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37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Ali A, Garde R, Schaffer OC, Bard JAM, Husain K, Kik SK, Davis KA, Luengo-Woods S, Igarashi MG, Drummond DA, Squires AH, Pincus D. Adaptive preservation of orphan ribosomal proteins in chaperone-dispersed condensates. Nature Cell Biology. PMID 37845327 DOI: 10.1038/s41556-023-01253-2  0.32
2023 Kik SK, Christopher D, Glauninger H, Hickernell CW, Bard JAM, Ford M, Sosnick TR, Drummond DA. An adaptive biomolecular condensation response is conserved across environmentally divergent species. Biorxiv : the Preprint Server For Biology. PMID 37546789 DOI: 10.1101/2023.07.28.551061  0.549
2020 Pattanayak GK, Liao Y, Wallace EWJ, Budnik B, Drummond DA, Rust MJ. Daily Cycles of Reversible Protein Condensation in Cyanobacteria. Cell Reports. 32: 108032. PMID 32814039 DOI: 10.1016/J.Celrep.2020.108032  0.358
2020 Triandafillou CG, Katanski CD, Dinner AR, Drummond DA. Transient intracellular acidification regulates the core transcriptional heat shock response. Elife. 9. PMID 32762843 DOI: 10.7554/Elife.54880  0.314
2019 Drummond DA, Bloom JD. A Nobel Prize for evolution Evolution. 73: 630-631. DOI: 10.1111/Evo.13697  0.643
2018 McCully AL, Behringer MG, Gliessman JR, Pilipenko EV, Mazny JL, Lynch M, Drummond DA, McKinlay JB. An nitrogen starvation response is important for mutualistic coexistence with . Applied and Environmental Microbiology. PMID 29728387 DOI: 10.1128/Aem.00404-18  0.305
2017 Riback JA, Katanski CD, Kear-Scott JL, Pilipenko EV, Rojek AE, Sosnick TR, Drummond DA. Stress-Triggered Phase Separation Is an Adaptive, Evolutionarily Tuned Response. Cell. 168: 1028-1040.e19. PMID 28283059 DOI: 10.1016/J.Cell.2017.02.027  0.76
2017 Riback JA, Katanski CA, Kear-Scott JL, Pilipenko EV, Sosnick TR, Drummond DA. How Evolution Tunes Stress-Triggered Protein Phase Separation to Promote Cell Fitness During Stress Biophysical Journal. 112: 5a. DOI: 10.1016/J.Bpj.2016.11.047  0.763
2016 Riback J, Katanski C, Sosnick TR, Drummond DA. Hydrophobicity of Poly(A)-Binding Protein's Intrinsically Disordered Region Determines its Conformation and Organism Thermotolerance Biophysical Journal. 110: 558a. DOI: 10.1016/J.Bpj.2015.11.2986  0.771
2015 Wallace EW, Kear-Scott JL, Pilipenko EV, Schwartz MH, Laskowski PR, Rojek AE, Katanski CD, Riback JA, Dion MF, Franks AM, Airoldi EM, Pan T, Budnik BA, Drummond DA. Reversible, Specific, Active Aggregates of Endogenous Proteins Assemble upon Heat Stress. Cell. 162: 1286-98. PMID 26359986 DOI: 10.1016/J.Cell.2015.08.041  0.787
2015 Wallace EW, Drummond DA. Dying mRNA Tells a Story of Its Life. Cell. 161: 1246-8. PMID 26046434 DOI: 10.1016/J.Cell.2015.05.043  0.603
2015 Franks AM, Csárdi G, Drummond DA, Airoldi EM. Estimating a structured covariance matrix from multi-lab measurements in high-throughput biology. Journal of the American Statistical Association. 110: 27-44. PMID 25954056 DOI: 10.1080/01621459.2014.964404  0.358
2015 Csárdi G, Franks A, Choi DS, Airoldi EM, Drummond DA. Accounting for experimental noise reveals that mRNA levels, amplified by post-transcriptional processes, largely determine steady-state protein levels in yeast. Plos Genetics. 11: e1005206. PMID 25950722 DOI: 10.1371/Journal.Pgen.1005206  0.377
2015 Zaborske JM, Bauer DuMont VL, Wallace EW, Pan T, Aquadro CF, Drummond DA. Correction: A nutrient-driven tRNA modification alters translational fidelity and genome-wide protein coding across an animal genus. Plos Biology. 13: e1002150. PMID 25923688 DOI: 10.1371/journal.pbio.1002150  0.61
2015 Riback J, Laskowski P, Scott JL, Wallace EW, Rojek AE, Schwartz MH, Sosnick TR, Drummond DA. Heat Shock Triggers Assembly of tRNA Synthetases into an Active Supercomplex Biophysical Journal. 108: 221a. DOI: 10.1016/J.Bpj.2014.11.1219  0.753
2014 Zaborske JM, DuMont VL, Wallace EW, Pan T, Aquadro CF, Drummond DA. A nutrient-driven tRNA modification alters translational fidelity and genome-wide protein coding across an animal genus. Plos Biology. 12: e1002015. PMID 25489848 DOI: 10.1371/Journal.Pbio.1002015  0.658
2013 Geiler-Samerotte KA, Hashimoto T, Dion MF, Budnik BA, Airoldi EM, Drummond DA. Quantifying condition-dependent intracellular protein levels enables high-precision fitness estimates. Plos One. 8: e75320. PMID 24086506 DOI: 10.1371/Journal.Pone.0075320  0.747
2013 Wallace EW, Airoldi EM, Drummond DA. Estimating selection on synonymous codon usage from noisy experimental data. Molecular Biology and Evolution. 30: 1438-53. PMID 23493257 DOI: 10.1093/Molbev/Mst051  0.626
2013 Agashe D, Martinez-Gomez NC, Drummond DA, Marx CJ. Good codons, bad transcript: large reductions in gene expression and fitness arising from synonymous mutations in a key enzyme. Molecular Biology and Evolution. 30: 549-60. PMID 23223712 DOI: 10.1093/Molbev/Mss273  0.396
2013 Geiler-Samerotte KA, Hashimoto T, Dion MF, Budnik BA, Airoldi EM, Drummond DA. Correction: Quantifying Condition-Dependent Intracellular Protein Levels Enables High-Precision Fitness Estimates Plos One. 8. DOI: 10.1371/annotation/9f5465d9-e9fa-4a80-84ca-9c9a3f6e82c7  0.739
2012 Drummond DA. How infidelity creates a sticky situation. Molecular Cell. 48: 663-4. PMID 23244760 DOI: 10.1016/J.Molcel.2012.11.024  0.301
2011 Geiler-Samerotte KA, Dion MF, Budnik BA, Wang SM, Hartl DL, Drummond DA. Misfolded proteins impose a dosage-dependent fitness cost and trigger a cytosolic unfolded protein response in yeast. Proceedings of the National Academy of Sciences of the United States of America. 108: 680-5. PMID 21187411 DOI: 10.1073/Pnas.1017570108  0.806
2010 Wilke CO, Drummond DA. Signatures of protein biophysics in coding sequence evolution. Current Opinion in Structural Biology. 20: 385-9. PMID 20395125 DOI: 10.1016/J.Sbi.2010.03.004  0.626
2009 Drummond DA. Protein evolution: innovative chaps. Current Biology : Cb. 19: R740-2. PMID 19906575 DOI: 10.1016/J.Cub.2009.07.039  0.458
2009 Drummond DA, Wilke CO. The evolutionary consequences of erroneous protein synthesis. Nature Reviews. Genetics. 10: 715-24. PMID 19763154 DOI: 10.1038/Nrg2662  0.545
2008 Drummond DA, Wilke CO. Mistranslation-induced protein misfolding as a dominant constraint on coding-sequence evolution. Cell. 134: 341-52. PMID 18662548 DOI: 10.1016/J.Cell.2008.05.042  0.608
2008 Zhou T, Drummond DA, Wilke CO. Contact density affects protein evolutionary rate from bacteria to animals. Journal of Molecular Evolution. 66: 395-404. PMID 18379715 DOI: 10.1007/S00239-008-9094-4  0.586
2007 Li Y, Drummond DA, Sawayama AM, Snow CD, Bloom JD, Arnold FH. A diverse family of thermostable cytochrome P450s created by recombination of stabilizing fragments. Nature Biotechnology. 25: 1051-6. PMID 17721510 DOI: 10.1038/Nbt1333  0.71
2007 Li Y, Drummond DA, Sawayama AM, Snow CD, Bloom JD, Arnold FH. Erratum: Corrigendum: A diverse family of thermostable cytochrome P450s created by recombination of stabilizing fragments Nature Biotechnology. 25: 1488-1488. DOI: 10.1038/Nbt1207-1488D  0.674
2006 Bloom JD, Drummond DA, Arnold FH, Wilke CO. Structural determinants of the rate of protein evolution in yeast. Molecular Biology and Evolution. 23: 1751-61. PMID 16782762 DOI: 10.1093/Molbev/Msl040  0.769
2006 Wilke CO, Drummond DA. Population genetics of translational robustness. Genetics. 173: 473-81. PMID 16489231 DOI: 10.1534/Genetics.105.051300  0.565
2006 Drummond DA, Raval A, Wilke CO. A single determinant dominates the rate of yeast protein evolution. Molecular Biology and Evolution. 23: 327-37. PMID 16237209 DOI: 10.1093/Molbev/Msj038  0.615
2005 Drummond DA, Bloom JD, Adami C, Wilke CO, Arnold FH. Why highly expressed proteins evolve slowly. Proceedings of the National Academy of Sciences of the United States of America. 102: 14338-43. PMID 16176987 DOI: 10.1073/Pnas.0504070102  0.794
2005 Wilke CO, Bloom JD, Drummond DA, Raval A. Predicting the tolerance of proteins to random amino acid substitution. Biophysical Journal. 89: 3714-20. PMID 16150971 DOI: 10.1529/Biophysj.105.062125  0.733
2005 Drummond DA, Iverson BL, Georgiou G, Arnold FH. Why high-error-rate random mutagenesis libraries are enriched in functional and improved proteins. Journal of Molecular Biology. 350: 806-16. PMID 15939434 DOI: 10.1016/J.Jmb.2005.05.023  0.543
2005 Drummond DA, Silberg JJ, Meyer MM, Wilke CO, Arnold FH. On the conservative nature of intragenic recombination. Proceedings of the National Academy of Sciences of the United States of America. 102: 5380-5. PMID 15809422 DOI: 10.1073/Pnas.0500729102  0.781
2005 Bloom JD, Silberg JJ, Wilke CO, Drummond DA, Adami C, Arnold FH. Thermodynamic prediction of protein neutrality. Proceedings of the National Academy of Sciences of the United States of America. 102: 606-11. PMID 15644440 DOI: 10.1073/Pnas.0406744102  0.764
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