Charles H. Cannon, Ph.D. - Publications

Affiliations: 
2000 Duke University, Durham, NC 

55 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Wang G, Cannon CH, Chen J. Pollinator sharing and gene flow among closely related sympatric dioecious fig taxa. Proceedings. Biological Sciences / the Royal Society. 283. PMID 27075252 DOI: 10.1098/rspb.2015.2963  1
2015 Fan H, Ives AR, Surget-Groba Y, Cannon CH. An assembly and alignment-free method of phylogeny reconstruction from next-generation sequencing data. Bmc Genomics. 16: 522. PMID 26169061 DOI: 10.1186/s12864-015-1647-5  1
2015 Ren J, Song K, Deng M, Reinert G, Cannon CH, Sun F. Inference of Markovian Properties of Molecular Sequences from NGS Data and Applications to Comparative Genomics. Bioinformatics (Oxford, England). PMID 26130573 DOI: 10.1093/bioinformatics/btv395  1
2015 Cannon CH, Lerdau M. Variable mating behaviors and the maintenance of tropical biodiversity. Frontiers in Genetics. 6: 183. PMID 26042148 DOI: 10.3389/fgene.2015.00183  1
2015 Zhai DL, Cannon CH, Dai ZC, Zhang CP, Xu JC. Deforestation and fragmentation of natural forests in the upper Changhua watershed, Hainan, China: implications for biodiversity conservation. Environmental Monitoring and Assessment. 187: 4137. PMID 25416130 DOI: 10.1007/s10661-014-4137-3  1
2014 Lang T, Yin K, Liu J, Cao K, Cannon CH, Du FK. Protein domain analysis of genomic sequence data reveals regulation of LRR related domains in plant transpiration in Ficus. Plos One. 9: e108719. PMID 25269070 DOI: 10.1371/journal.pone.0108719  1
2014 Alele PO, Sheil D, Surget-Groba Y, Lingling S, Cannon CH. How does conversion of natural tropical rainforest ecosystems affect soil bacterial and fungal communities in the Nile river watershed of Uganda? Plos One. 9: e104818. PMID 25118069 DOI: 10.1371/journal.pone.0104818  1
2014 de Bruyn M, Stelbrink B, Morley RJ, Hall R, Carvalho GR, Cannon CH, van den Bergh G, Meijaard E, Metcalfe I, Boitani L, Maiorano L, Shoup R, von Rintelen T. Borneo and Indochina are major evolutionary hotspots for Southeast Asian biodiversity. Systematic Biology. 63: 879-901. PMID 25070971 DOI: 10.1093/sysbio/syu047  1
2014 Zhang MG, Zhou ZK, Chen WY, Cannon CH, Raes N, Slik JWF. Major declines of woody plant species ranges under climate change in Yunnan, China Diversity and Distributions. 20: 405-415. DOI: 10.1111/ddi.12165  1
2014 Yi ZF, Wong G, Cannon CH, Xu J, Beckschäfer P, Swetnam RD. Can carbon-trading schemes help to protect China's most diverse forest ecosystems? A case study from Xishuangbanna, Yunnan Land Use Policy. 38: 646-656. DOI: 10.1016/j.landusepol.2013.12.013  1
2014 Yi ZF, Cannon CH, Chen J, Ye CX, Swetnam RD. Developing indicators of economic value and biodiversity loss for rubber plantations in Xishuangbanna, southwest China: A case study from Menglun township Ecological Indicators. 36: 788-797. DOI: 10.1016/j.ecolind.2013.03.016  1
2014 Chen SC, Cannon CH, Kua CS, Liu JJ, Galbraith DW. Genome size variation in the Fagaceae and its implications for trees Tree Genetics and Genomes. 10: 977-988. DOI: 10.1007/s11295-014-0736-y  1
2014 Zhai DL, Xu JC, Dai ZC, Cannon CH, Grumbine RE. Increasing tree cover while losing diverse natural forests in tropical Hainan, China Regional Environmental Change. 14: 611-621. DOI: 10.1007/s10113-013-0512-9  1
2014 Javed AM, Cannon CH, Wickneswari R. Microsatellite DNA markers in shorea platyclados (Dipterocarpaceae): Genetic diversity, size homoplasy and mother trees Journal of Forest Science. 60: 18-27.  1
2013 Ruan J, Jiang L, Chong Z, Gong Q, Li H, Li C, Tao Y, Zheng C, Zhai W, Turissini D, Cannon CH, Lu X, Wu CI. Pseudo-Sanger sequencing: massively parallel production of long and near error-free reads using NGS technology. Bmc Genomics. 14: 711. PMID 24134808 DOI: 10.1186/1471-2164-14-711  1
2013 Song Y, Gao J, Yang F, Kua CS, Liu J, Cannon CH. Molecular evolutionary analysis of the Alfin-like protein family in Arabidopsis lyrata, Arabidopsis thaliana, and Thellungiella halophila. Plos One. 8: e66838. PMID 23840867 DOI: 10.1371/journal.pone.0066838  1
2013 Wang B, Ye CX, Cannon CH, Chen J. Dissecting the decision making process of scatter-hoarding rodents Oikos. 122: 1027-1034. DOI: 10.1111/j.1600-0706.2012.20823.x  1
2012 Wong MM, Cannon CH, Wickneswari R. Development of high-throughput SNP-based genotyping in Acacia auriculiformis x A. mangium hybrids using short-read transcriptome data. Bmc Genomics. 13: 726. PMID 23265623 DOI: 10.1186/1471-2164-13-726  1
2012 Kua CS, Ruan J, Harting J, Ye CX, Helmus MR, Yu J, Cannon CH. Reference-free comparative genomics of 174 chloroplasts. Plos One. 7: e48995. PMID 23185288 DOI: 10.1371/journal.pone.0048995  1
2012 Cannon CH. A curiosity moment for tropical biology? Science (New York, N.Y.). 338: 467. PMID 23112309 DOI: 10.1126/science.338.6106.467-a  1
2012 Laurance WF, Useche DC, Rendeiro J, Kalka M, Bradshaw CJ, Sloan SP, Laurance SG, Campbell M, Abernethy K, Alvarez P, Arroyo-Rodriguez V, Ashton P, Benítez-Malvido J, Blom A, Bobo KS, ... Cannon CH, et al. Averting biodiversity collapse in tropical forest protected areas. Nature. 489: 290-4. PMID 22832582 DOI: 10.1038/nature11318  1
2012 Ye C, Ma ZS, Cannon CH, Pop M, Yu DW. Exploiting sparseness in de novo genome assembly. Bmc Bioinformatics. 13: S1. PMID 22537038 DOI: 10.1186/1471-2105-13-S6-S1  1
2012 Chen X, Cannon CH, Conklin-Brittan NL. Evidence for a trade-off strategy in stone oak (Lithocarpus) seeds between physical and chemical defense highlights fiber as an important antifeedant. Plos One. 7: e32890. PMID 22457722 DOI: 10.1371/journal.pone.0032890  1
2012 Zhai DL, Cannon CH, Slik JW, Zhang CP, Dai ZC. Rubber and pulp plantations represent a double threat to Hainan's natural tropical forests. Journal of Environmental Management. 96: 64-73. PMID 22208399 DOI: 10.1016/j.jenvman.2011.10.011  1
2012 Zhang MG, Zhou ZK, Chen WY, Slik JWF, Cannon CH, Raes N. Using species distribution modeling to improve conservation and land use planning of Yunnan, China Biological Conservation. 153: 257-264. DOI: 10.1016/j.biocon.2012.04.023  1
2011 Zhang L, Li HT, Gao LM, Yang JB, Li DZ, Cannon CH, Chen J, Li QJ. Phylogeny and evolution of bracts and bracteoles in Tacca (Dioscoreaceae). Journal of Integrative Plant Biology. 53: 901-11. PMID 21951914 DOI: 10.1111/j.1744-7909.2011.01076.x  1
2011 Slik JW, Aiba S, Bastian M, Brearley FQ, Cannon CH, Eichhorn KA, Fredriksson G, Kartawinata K, Laumonier Y, Mansor A, Marjokorpi A, Meijaard E, Morley RJ, Nagamasu H, Nilus R, et al. Soils on exposed Sunda shelf shaped biogeographic patterns in the equatorial forests of Southeast Asia. Proceedings of the National Academy of Sciences of the United States of America. 108: 12343-7. PMID 21746913 DOI: 10.1073/pnas.1103353108  1
2011 Wong MM, Cannon CH, Wickneswari R. Identification of lignin genes and regulatory sequences involved in secondary cell wall formation in Acacia auriculiformis and Acacia mangium via de novo transcriptome sequencing. Bmc Genomics. 12: 342. PMID 21729267 DOI: 10.1186/1471-2164-12-342  1
2011 Kettle CJ, Ghazoul J, Ashton P, Cannon CH, Chong L, Diway B, Faridah E, Harrison R, Hector A, Hollingsworth P, Koh LP, Khoo E, Kitayama K, Kartawinata K, Marshall AJ, et al. Seeing the fruit for the trees in Borneo Conservation Letters. 4: 184-191. DOI: 10.1111/j.1755-263X.2010.00161.x  1
2011 Slik JWF, van Beek M, Bernard C, Bongers F, Breman FC, Cannon CH, Sidiyasa K. Limited edge effects along a burned-unburned bornean forest boundary seven years after disturbance Biotropica. 43: 288-298. DOI: 10.1111/j.1744-7429.2010.00706.x  1
2011 Song L, Cannon CH. Impact of socio-economic status on the implementation of China's collective forest tenure reform in Zhang Guying Township, Hunan: Potential for increasing disparity Forestry. 84: 327-335. DOI: 10.1093/forestry/cpr016  1
2011 Cannon CH, Chen X. Lithocarpus pulongtauensis (Fagaceae), a new species from Borneo Annales Botanici Fennici. 48: 495-498.  1
2010 Kettle CJ, Ghazoul J, Ashton PS, Cannon CH, Chong L, Diway B, Faridah E, Harrison R, Hector A, Hollingsworth P, Koh LP, Khoo E, Kitayama K, Kartawinata K, Marshall AJ, et al. Mass fruiting in Borneo: a missed opportunity. Science (New York, N.Y.). 330: 584. PMID 21030629 DOI: 10.1126/science.330.6004.584-a  1
2010 Slik JW, Breman FC, Bernard C, van Beek M, Cannon CH, Eichhorn KA, Sidiyasa K. Fire as a selective force in a Bornean tropical everwet forest. Oecologia. 164: 841-9. PMID 20811911 DOI: 10.1007/s00442-010-1764-4  1
2010 Cannon CH, Kua CS, Zhang D, Harting JR. Assembly free comparative genomics of short-read sequence data discovers the needles in the haystack. Molecular Ecology. 19: 147-61. PMID 20331777 DOI: 10.1111/j.1365-294X.2009.04484.x  1
2010 Helmus MR, Keller WB, Paterson MJ, Yan ND, Cannon CH, Rusak JA. Communities contain closely related species during ecosystem disturbance. Ecology Letters. 13: 162-74. PMID 20015255 DOI: 10.1111/j.1461-0248.2009.01411.x  1
2010 Slik JWF, Aiba SI, Brearley FQ, Cannon CH, Forshed O, Kitayama K, Nagamasu H, Nilus R, Payne J, Paoli G, Poulsen AD, Raes N, Sheil D, Sidiyasa K, Suzuki E, et al. Environmental correlates of tree biomass, basal area, wood specific gravity and stem density gradients in Borneo's tropical forests Global Ecology and Biogeography. 19: 50-60. DOI: 10.1111/j.1466-8238.2009.00489.x  1
2009 Chen J, Cannon CH, Hu H. Tropical botanical gardens: at the in situ ecosystem management frontier. Trends in Plant Science. 14: 584-9. PMID 19781975 DOI: 10.1016/j.tplants.2009.08.010  1
2009 Cannon CH, Morley RJ, Bush AB. The current refugial rainforests of Sundaland are unrepresentative of their biogeographic past and highly vulnerable to disturbance. Proceedings of the National Academy of Sciences of the United States of America. 106: 11188-93. PMID 19549829 DOI: 10.1073/pnas.0809865106  1
2009 Slik JWF, Raes N, Aiba SI, Brearley FQ, Cannon CH, Meijaard E, Nagamasu H, Nilus R, Paoli G, Poulsen AD, Sheil D, Suzuki E, Van Valkenburg JLCH, Webb CO, Wilkie P, et al. Environmental correlates for tropical tree diversity and distribution patterns in Borneo: BIODIVERSITY RESEARCH Diversity and Distributions. 15: 523-532. DOI: 10.1111/j.1472-4642.2009.00557.x  1
2007 Cannon CH, Curran LM, Marshall AJ, Leighton M. Long-term reproductive behaviour of woody plants across seven Bornean forest types in the Gunung Palung National Park (Indonesia): suprannual synchrony, temporal productivity and fruiting diversity. Ecology Letters. 10: 956-69. PMID 17845296 DOI: 10.1111/j.1461-0248.2007.01089.x  1
2007 Cannon CH, Summers M, Harting JR, Kessler PJA. Developing conservation priorities based on forest type, condition, and threats in a poorly known ecoregion: Sulawesi, Indonesia Biotropica. 39: 747-759. DOI: 10.1111/j.1744-7429.2007.00323.x  1
2007 Cannon CH, Curran LM, Marshall AJ, Leighton M. Beyond mast-fruiting events: Community asynchrony and individual dormancy dominate woody plant reproductive behavior across seven Bornean forest types Current Science. 93: 1558-1566.  1
2006 Cannon CH, Kua CS, Lobenhofer EK, Hurban P. Capturing genomic signatures of DNA sequence variation using a standard anonymous microarray platform. Nucleic Acids Research. 34: e121. PMID 17000641 DOI: 10.1093/nar/gkl478  1
2006 Zhang B, Pan X, Cannon CH, Cobb GP, Anderson TA. Conservation and divergence of plant microRNA genes. The Plant Journal : For Cell and Molecular Biology. 46: 243-59. PMID 16623887 DOI: 10.1111/j.1365-313X.2006.02697.x  1
2005 Asif MJ, Cannon CH. DNA extraction from processed wood: A case study for the identification of an endangered timber species (Gonystylus bancanus) Plant Molecular Biology Reporter. 23: 185-192. DOI: 10.1007/BF02772709  1
2004 Cannon CH, Leighton M. Tree species distributions across five habitats in a Bornean rain forest Journal of Vegetation Science. 15: 257-266.  1
2003 Slik JWF, Poulsen AD, Ashton PS, Cannon CH, Eichhorn KAO, Kartawinata K, Lanniari I, Nagamasu H, Nakagawa M, Van Nieuwstadt MGL, Payne J, Purwaningsih, Saridan A, Sidiyasa K, Verburg RW, et al. A floristic analysis of the lowland dipterocarp forests of Borneo Journal of Biogeography. 30: 1517-1531. DOI: 10.1046/j.1365-2699.2003.00967.x  1
2003 Cannon CH, Manos PS. Phylogeography of the Southeast Asian stone oaks (Lithocarpus) Journal of Biogeography. 30: 211-226. DOI: 10.1046/j.1365-2699.2003.00829.x  1
2001 Cannon CH, Manos PS. Combining and comparing morphometric shape descriptors with a molecular phylogeny: the case of fruit type evolution in Bornean Lithocarpus (Fagaceae). Systematic Biology. 50: 860-80. PMID 12116637 DOI: 10.1080/106351501753462849  1
2001 Manos PS, Zhou ZK, Cannon CH. Systematics of Fagaceae: Phylogenetic tests of reproductive trait evolution International Journal of Plant Sciences. 162: 1361-1379. DOI: 10.1086/322949  1
2000 Cannon CH, Manos PS. The Bornean Lithocarpus Bl. section Synaedrys (Lindl.) Barnett (Fagaceae): Its circumscription and description of a new species Botanical Journal of the Linnean Society. 133: 343-357. DOI: 10.1006/bojl.1999.0325  1
1998 Cannon CH, Peart DR, Leighton M. Tree species diversity in commercially logged bornean rainforest Science (New York, N.Y.). 281: 1366-8. PMID 9721105  1
1994 Cannon CH, Leighton M. Comparative locomotor ecology of gibbons and macaques: selection of canopy elements for crossing gaps. American Journal of Physical Anthropology. 93: 505-24. PMID 8048471 DOI: 10.1002/ajpa.1330930409  1
1994 Cannon CH, Peart DR, Leighton M, Kartawinata K. The structure of lowland rainforest after selective logging in West Kalimantan, Indonesia Forest Ecology and Management. 67: 49-68. DOI: 10.1016/0378-1127(94)90007-8  1
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