Daniel Dykhuizen - Publications

Stony Brook University, Stony Brook, NY, United States 

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Year Citation  Score
2018 Spagnolo F, Cristofari P, Tatonetti NP, Ginzburg LR, Dykhuizen DE. Pathogen population structure can explain hospital outbreaks. The Isme Journal. PMID 30046167 DOI: 10.1038/S41396-018-0235-5  0.76
2018 Warsi OM, Andersson DI, Dykhuizen DE. Different adaptive strategies in E. coli populations evolving under macronutrient limitation and metal ion limitation. Bmc Evolutionary Biology. 18: 72. PMID 29776341 DOI: 10.1186/S12862-018-1191-4  1
2017 Warsi OM, Dykhuizen DE. Evolutionary implications of Liebig's law of the minimum: Selection under low concentrations of two nonsubstitutable nutrients. Ecology and Evolution. 7: 5296-5309. PMID 28770068 DOI: 10.1002/Ece3.3096  1
2015 Spagnolo F, Rinaldi C, Sajorda DR, Dykhuizen DE. Evolution of Resistance to Continuously Increasing Streptomycin Concentrations in Populations of Escherichia coli. Antimicrobial Agents and Chemotherapy. 60: 1336-42. PMID 26666944 DOI: 10.1128/Aac.01359-15  0.76
2015 Gray SM, Dykhuizen DE, Padilla DK. The effects of species properties and community context on establishment success Oikos. 124: 355-363. DOI: 10.1111/Oik.01550  1
2014 Monzón J, Kays R, Dykhuizen DE. Assessment of coyote-wolf-dog admixture using ancestry-informative diagnostic SNPs. Molecular Ecology. 23: 182-97. PMID 24148003 DOI: 10.1111/Mec.12570  1
2013 Chattopadhyay S, Paul S, Dykhuizen DE, Sokurenko EV. Tracking recent adaptive evolution in microbial species using TimeZone. Nature Protocols. 8: 652-65. PMID 23471110 DOI: 10.1038/nprot.2013.031  1
2012 Weissman SJ, Johnson JR, Tchesnokova V, Billig M, Dykhuizen D, Riddell K, Rogers P, Qin X, Butler-Wu S, Cookson BT, Fang FC, Scholes D, Chattopadhyay S, Sokurenko E. High-resolution two-locus clonal typing of extraintestinal pathogenic Escherichia coli. Applied and Environmental Microbiology. 78: 1353-60. PMID 22226951 DOI: 10.1128/Aem.06663-11  1
2010 Stoebel DM, Dykhuizen DE. Waste and yet want not. Molecular Cell. 38: 625-6. PMID 20541995 DOI: 10.1016/J.Molcel.2010.05.028  1
2010 Brisson D, Vandermause MF, Meece JK, Reed KD, Dykhuizen DE. Evolution of northeastern and midwestern Borrelia burgdorferi, United States. Emerging Infectious Diseases. 16: 911-7. PMID 20507740 DOI: 10.3201/Eid1606.090329  1
2010 Dykhuizen D, Kalia A. The population structure of pathogenic bacteria Evolution in Health and Disease. DOI: 10.1093/acprof:oso/9780199207466.003.0014  1
2009 Zhong S, Miller SP, Dykhuizen DE, Dean AM. Transcription, translation, and the evolution of specialists and generalists. Molecular Biology and Evolution. 26: 2661-78. PMID 19706726 DOI: 10.1093/Molbev/Msp187  1
2009 Chattopadhyay S, Weissman SJ, Minin VN, Russo TA, Dykhuizen DE, Sokurenko EV. High frequency of hotspot mutations in core genes of Escherichia coli due to short-term positive selection. Proceedings of the National Academy of Sciences of the United States of America. 106: 12412-7. PMID 19617543 DOI: 10.1073/Pnas.0906217106  1
2009 Chattopadhyay S, Paranjpye RN, Dykhuizen DE, Sokurenko EV, Strom MS. Comparative evolutionary analysis of the major structural subunit of Vibrio vulnificus type IV pili. Molecular Biology and Evolution. 26: 2185-96. PMID 19556347 DOI: 10.1093/molbev/msp124  1
2009 Dykhuizen DE, Dean AM. Experimental evolution from the bottom up Experimental Evolution: Concepts, Methods, and Applications of Selection Experiments. 86-106.  1
2008 Dykhuizen DE, Brisson D, Sandigursky S, Wormser GP, Nowakowski J, Nadelman RB, Schwartz I. The propensity of different Borrelia burgdorferi sensu stricto genotypes to cause disseminated infections in humans. The American Journal of Tropical Medicine and Hygiene. 78: 806-10. PMID 18458317 DOI: 10.4269/Ajtmh.2008.78.806  1
2008 Stoebel DM, Dean AM, Dykhuizen DE. The cost of expression of Escherichia coli lac operon proteins is in the process, not in the products. Genetics. 178: 1653-60. PMID 18245823 DOI: 10.1534/Genetics.107.085399  1
2008 Brisson D, Dykhuizen DE, Ostfeld RS. Conspicuous impacts of inconspicuous hosts on the Lyme disease epidemic. Proceedings. Biological Sciences / the Royal Society. 275: 227-35. PMID 18029304 DOI: 10.1098/Rspb.2007.1208  1
2007 Chattopadhyay S, Dykhuizen DE, Sokurenko EV. ZPS: visualization of recent adaptive evolution of proteins. Bmc Bioinformatics. 8: 187. PMID 17555597 DOI: 10.1186/1471-2105-8-187  1
2007 Korotkova N, Chattopadhyay S, Tabata TA, Beskhlebnaya V, Vigdorovich V, Kaiser BK, Strong RK, Dykhuizen DE, Sokurenko EV, Moseley SL. Selection for functional diversity drives accumulation of point mutations in Dr adhesins of Escherichia coli. Molecular Microbiology. 64: 180-94. PMID 17376081 DOI: 10.1111/J.1365-2958.2007.05648.X  1
2007 Chattopadhyay S, Feldgarden M, Weissman SJ, Dykhuizen DE, van Belle G, Sokurenko EV. Haplotype diversity in "source-sink" dynamics of Escherichia coli urovirulence. Journal of Molecular Evolution. 64: 204-14. PMID 17177088 DOI: 10.1007/S00239-006-0063-5  1
2006 Sokurenko EV, Gomulkiewicz R, Dykhuizen DE. Source-sink dynamics of virulence evolution. Nature Reviews. Microbiology. 4: 548-55. PMID 16778839 DOI: 10.1038/Nrmicro1446  1
2006 Brisson D, Dykhuizen DE. A modest model explains the distribution and abundance of Borrelia burgdorferi strains. The American Journal of Tropical Medicine and Hygiene. 74: 615-22. PMID 16606995 DOI: 10.4269/Ajtmh.2006.74.615  1
2006 Weissman SJ, Chattopadhyay S, Aprikian P, Obata-Yasuoka M, Yarova-Yarovaya Y, Stapleton A, Ba-Thein W, Dykhuizen D, Johnson JR, Sokurenko EV. Clonal analysis reveals high rate of structural mutations in fimbrial adhesins of extraintestinal pathogenic Escherichia coli. Molecular Microbiology. 59: 975-88. PMID 16420365 DOI: 10.1111/j.1365-2958.2005.04985.x  1
2004 Brisson D, Dykhuizen DE. ospC diversity in Borrelia burgdorferi: different hosts are different niches. Genetics. 168: 713-22. PMID 15514047 DOI: 10.1534/Genetics.104.028738  1
2004 Dykhuizen DE, Dean AM. Evolution of specialists in an experimental microcosm. Genetics. 167: 2015-26. PMID 15342537 DOI: 10.1534/Genetics.103.025205  1
2004 Zhong S, Khodursky A, Dykhuizen DE, Dean AM. Evolutionary genomics of ecological specialization. Proceedings of the National Academy of Sciences of the United States of America. 101: 11719-24. PMID 15289609 DOI: 10.1073/Pnas.0404397101  1
2004 Sokurenko EV, Feldgarden M, Trintchina E, Weissman SJ, Avagyan S, Chattopadhyay S, Johnson JR, Dykhuizen DE. Selection footprint in the FimH adhesin shows pathoadaptive niche differentiation in Escherichia coli. Molecular Biology and Evolution. 21: 1373-83. PMID 15044596 DOI: 10.1093/Molbev/Msh136  0.88
2003 Feldgarden M, Stoebel DM, Brisson D, Dykhuizen DE. SIZE DOESN'T MATTER: MICROBIAL SELECTION EXPERIMENTS ADDRESS ECOLOGICAL PHENOMENA. Ecology. 84: 1679-1687. PMID 21423836 DOI: 10.1890/0012-9658(2003)084[1679:Sdmmse]2.0.Co;2  1
2003 Bull J, Dykhuizen D. Virus evolution: epidemics-in-waiting. Nature. 426: 609-10. PMID 14668840 DOI: 10.1038/426609a  1
2003 Weissman SJ, Moseley SL, Dykhuizen DE, Sokurenko EV. Enterobacterial adhesins and the case for studying SNPs in bacteria. Trends in Microbiology. 11: 115-7. PMID 12648942 DOI: 10.1016/S0966-842X(03)00010-6  1
2002 Lunzer M, Natarajan A, Dykhuizen DE, Dean AM. Enzyme kinetics, substitutable resources and competition: from biochemistry to frequency-dependent selection in lac. Genetics. 162: 485-99. PMID 12242256  1
2002 Qiu WG, Dykhuizen DE, Acosta MS, Luft BJ. Geographic uniformity of the Lyme disease spirochete (Borrelia burgdorferi) and its shared history with tick vector (Ixodes scapularis) in the Northeastern United States. Genetics. 160: 833-49. PMID 11901105  1
2001 Johnson JR, Weissman SJ, Stell AL, Trintchina E, Dykhuizen DE, Sokurenko EV. Clonal and pathotypic analysis of archetypal Escherichia coli cystitis isolate NU14. The Journal of Infectious Diseases. 184: 1556-65. PMID 11740731 DOI: 10.1086/323891  1
2001 Dykhuizen DE, Baranton G. The implications of a low rate of horizontal transfer in Borrelia. Trends in Microbiology. 9: 344-50. PMID 11435109 DOI: 10.1016/S0966-842X(01)02066-2  1
2001 Wang IN, Dykhuizen DE. Variation of enzyme activities at a branched pathway involved in the utilization of gluconate in Escherichia coli. Evolution; International Journal of Organic Evolution. 55: 897-908. PMID 11430650 DOI: 10.1554/0014-3820(2001)055[0897:Voeaaa]2.0.Co;2  1
2001 Baranton G, Seinost G, Theodore G, Postic D, Dykhuizen D. Distinct levels of genetic diversity of Borrelia burgdorferi are associated with different aspects of pathogenicity. Research in Microbiology. 152: 149-56. PMID 11316368 DOI: 10.1016/S0923-2508(01)01186-X  1
2000 Dykhuizen DE. Yersinia pestis: an instant species? Trends in Microbiology. 8: 296-8. PMID 10878759 DOI: 10.1016/S0966-842X(00)01783-2  1
2000 Gomes-Solecki MJ, Dunn JJ, Luft BJ, Castillo J, Dykhuizen DE, Yang X, Glass JD, Dattwyler RJ. Recombinant chimeric Borrelia proteins for diagnosis of Lyme disease. Journal of Clinical Microbiology. 38: 2530-5. PMID 10878038  1
2000 Rannala B, Qiu WG, Dykhuizen DE. Methods for estimating gene frequencies and detecting selection in bacterial populations. Genetics. 155: 499-508. PMID 10835376  1
1999 Seinost G, Golde WT, Berger BW, Dunn JJ, Qiu D, Dunkin DS, Dykhuizen DE, Luft BJ, Dattwyler RJ. Infection with multiple strains of Borrelia burgdorferi sensu stricto in patients with Lyme disease. Archives of Dermatology. 135: 1329-33. PMID 10566830  1
1999 Tuomanen E, Sokurenko EV, Dykhuizen DE. Divergence in the background: Hard to measure but the key to being the best of the best Trends in Microbiology. 7: 271-272. PMID 10390635 DOI: 10.1016/S0966-842X(99)01528-0  1
1999 Seinost G, Dykhuizen DE, Dattwyler RJ, Golde WT, Dunn JJ, Wang IN, Wormser GP, Schriefer ME, Luft BJ. Four clones of Borrelia burgdorferi sensu stricto cause invasive infection in humans. Infection and Immunity. 67: 3518-24. PMID 10377134 DOI: 10.1128/Iai.67.7.3518-3524.1999  1
1999 Sokurenko EV, Hasty DL, Dykhuizen DE. Pathoadaptive mutations: gene loss and variation in bacterial pathogens. Trends in Microbiology. 7: 191-5. PMID 10354593 DOI: 10.1016/S0966-842X(99)01493-6  1
1999 Wang IN, Dykhuizen DE, Qiu W, Dunn JJ, Bosler EM, Luft BJ. Genetic diversity of ospC in a local population of Borrelia burgdorferi sensu stricto. Genetics. 151: 15-30. PMID 9872945  1
1998 Sokurenko EV, Chesnokova V, Dykhuizen DE, Ofek I, Wu XR, Krogfelt KA, Struve C, Schembri MA, Hasty DL. Pathogenic adaptation of Escherichia coli by natural variation of the FimH adhesin. Proceedings of the National Academy of Sciences of the United States of America. 95: 8922-6. PMID 9671780 DOI: 10.1073/Pnas.95.15.8922  1
1998 Dykhuizen DE. Santa Rosalia revisited: why are there so many species of bacteria? Antonie Van Leeuwenhoek. 73: 25-33. PMID 9602276 DOI: 10.1023/A:1000665216662  1
1998 Golde WT, Robinson-Dunn B, Stobierski MG, Dykhuizen D, Wang IN, Carlson V, Stiefel H, Shiflett S, Campbell GL. Culture-confirmed reinfection of a person with different strains of Borrelia burgdorferi sensu stricto. Journal of Clinical Microbiology. 36: 1015-9. PMID 9542928 DOI: 10.1128/Jcm.36.4.1015-1019.1998  1
1997 Qiu WG, Bosler EM, Campbell JR, Ugine GD, Wang IN, Luft BJ, Dykhuizen DE. A population genetic study of Borrelia burgdorferi sensu stricto from eastern Long Island, New York, suggested frequency-dependent selection, gene flow and host adaptation. Hereditas. 127: 203-16. PMID 9474903 DOI: 10.1111/J.1601-5223.1997.00203.X  1
1996 Guttman DS, Wang PW, Wang IN, Bosler EM, Luft BJ, Dykhuizen DE. Multiple infections of Ixodes scapularis ticks by Borrelia burgdorferi as revealed by single-strand conformation polymorphism analysis. Journal of Clinical Microbiology. 34: 652-6. PMID 8904432 DOI: 10.1128/Jcm.34.3.652-656.1996  1
1996 Wang IN, Dykhuizen DE, Slobodkin LB. The evolution of phage lysis timing Evolutionary Ecology. 10: 545-558. DOI: 10.1007/Bf01237884  1
1995 McGrath BC, Dunn JJ, Gorgone G, Guttman D, Dykhuizen D, Luft BJ. Identification of an immunologically important hypervariable domain of major outer surface protein A of Borrelia burgdorferi. Infection and Immunity. 63: 1356-61. PMID 7890394 DOI: 10.1128/Iai.63.4.1356-1361.1995  1
1994 Guttman DS, Dykhuizen DE. Clonal divergence in Escherichia coli as a result of recombination, not mutation. Science (New York, N.Y.). 266: 1380-3. PMID 7973728 DOI: 10.1126/Science.7973728  1
1994 Guttman DS, Dykhuizen DE. Detecting selective sweeps in naturally occurring Escherichia coli. Genetics. 138: 993-1003. PMID 7896119  1
1994 Dykhuizen DE, Dean AM. Predicted fitness changes along an environmental gradient Evolutionary Ecology. 8: 524-541. DOI: 10.1007/Bf01238256  1
1993 Silva PJN, Dykhuizen DE. THE INCREASED POTENTIAL FOR SELECTION OF THE LAC OPERON OF ESCHERICHIA COLI. Evolution; International Journal of Organic Evolution. 47: 741-749. PMID 28567900 DOI: 10.1111/j.1558-5646.1993.tb01230.x  1
1993 Dykhuizen DE. Chemostats used for studying natural selection and adaptive evolution. Methods in Enzymology. 224: 613-31. PMID 8264415 DOI: 10.1016/0076-6879(93)24046-W  1
1993 Dykhuizen DE, Polin DS, Dunn JJ, Wilske B, Preac-Mursic V, Dattwyler RJ, Luft BJ. Borrelia burgdorferi is clonal: implications for taxonomy and vaccine development. Proceedings of the National Academy of Sciences of the United States of America. 90: 10163-7. PMID 8234271  1
1992 Dykhuizen DE. Experimental evolution: Replicating history. Trends in Ecology & Evolution. 7: 250-2. PMID 21236021 DOI: 10.1016/0169-5347(92)90167-A  1
1991 Kim J, Ginzburg LR, Dykhuizen DE. Quantifying the risks of invasion by genetically engineered organisms. Biotechnology (Reading, Mass.). 15: 193-214. PMID 2009381 DOI: 10.1016/B978-0-409-90199-3.50016-4  1
1991 Dykhuizen DE, Green L. Recombination in Escherichia coli and the definition of biological species. Journal of Bacteriology. 173: 7257-68. PMID 1938920  1
1990 Dykhuizen DE, Dean AM. Enzyme activity and fitness: Evolution in solution. Trends in Ecology & Evolution. 5: 257-62. PMID 21232368 DOI: 10.1016/0169-5347(90)90067-N  1
1990 Dykhuizen DE. Evolution. Mountaineering with microbes. Nature. 346: 15-6. PMID 2195352 DOI: 10.1038/346015a0  1
1990 Dykhuizen DE. Experimental studies of natural selection in bacteria Annual Review of Ecology and Systematics. 21: 373-398.  1
1989 Lawrence JG, Dykhuizen DE, DuBose RF, Hartl DL. Phylogenetic analysis using insertion sequence fingerprinting in Escherichia coli. Molecular Biology and Evolution. 6: 1-14. PMID 2564160 DOI: 10.1093/Oxfordjournals.Molbev.A040531  1
1988 Dean AM, Dykhuizen DE, Hartl DL. Fitness effects of amino acid replacements in the beta-galactosidase of Escherichia coli. Molecular Biology and Evolution. 5: 469-85. PMID 3143044 DOI: 10.1093/Oxfordjournals.Molbev.A040513  1
1988 DuBose RF, Dykhuizen DE, Hartl DL. Genetic exchange among natural isolates of bacteria: recombination within the phoA gene of Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 85: 7036-40. PMID 3045828 DOI: 10.1073/Pnas.85.18.7036  1
1988 Miller RD, Dykhuizen DE, Hartl DL. Fitness effects of a deletion mutation increasing transcription of the 6-phosphogluconate dehydrogenase gene in Escherichia coli. Molecular Biology and Evolution. 5: 691-703. PMID 2464736 DOI: 10.1093/Oxfordjournals.Molbev.A040522  1
1987 Sawyer SA, Dykhuizen DE, Hartl DL. Confidence interval for the number of selectively neutral amino acid polymorphisms. Proceedings of the National Academy of Sciences of the United States of America. 84: 6225-8. PMID 3306673 DOI: 10.1073/Pnas.84.17.6225  1
1987 Dykhuizen DE, Dean AM, Hartl DL. Metabolic flux and fitness. Genetics. 115: 25-31. PMID 3104135  1
1987 Sawyer SA, Dykhuizen DE, DuBose RF, Green L, Mutangadura-Mhlanga T, Wolczyk DF, Hartl DL. Distribution and abundance of insertion sequences among natural isolates of Escherichia coli. Genetics. 115: 51-63. PMID 3030884  1
1986 Hartl DL, Dean AM, Dykhuizen DE. The molecular biology of natural selection: reply to burton and place. Genetics. 114: 1037-9. PMID 17246353  1
1986 Dean AM, Dykhuizen DE, Hartl DL. Fitness as a function of beta-galactosidase activity in Escherichia coli. Genetical Research. 48: 1-8. PMID 3096817 DOI: 10.1017/S0016672300024587  1
1986 Hartl DL, Medhora M, Green L, Dykhuizen DE. The evolution of DNA sequences in Escherichia coli. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 312: 191-204. PMID 2870515 DOI: 10.1098/Rstb.1986.0001  1
1985 Dykhuizen DE, Mudd C, Honeycutt A, Hartl DL. POLYMORPHIC POSTTRANSLATIONAL MODIFICATION OF ALKALINE PHOSPHATASE IN ESCHERICHIA COLI. Evolution; International Journal of Organic Evolution. 39: 1-7. PMID 28563640 DOI: 10.1111/J.1558-5646.1985.Tb04075.X  1
1985 Hartl DL, Dykhuizen DE, Dean AM. Limits of adaptation: the evolution of selective neutrality. Genetics. 111: 655-74. PMID 3932127  1
1985 Dykhuizen DE, Sawyer SA, Green L, Miller RD, Hartl DL. Joint distribution of insertion elements IS4 and IS5 in natural isolates of Escherichia coli. Genetics. 111: 219-31. PMID 2996976  1
1984 Dykhuizen DE, de Framond J, Hartl DL. Selective neutrality of glucose-6-phosphate dehydrogenase allozymes in Escherichia coli. Molecular Biology and Evolution. 1: 162-70. PMID 6400649 DOI: 10.1093/Oxfordjournals.Molbev.A040309  1
1984 Miller RD, Dykhuizen DE, Green L, Hartl DL. Specific deletion occurring in the directed evolution of 6-phosphogluconate dehydrogenase in Escherichia coli. Genetics. 108: 765-72. PMID 6392014  1
1984 Dykhuizen DE, de Framond J, Hartl DL. Potential for hitchhiking in the eda-edd-zwf gene cluster of Escherichia coli. Genetical Research. 43: 229-39. PMID 6381229 DOI: 10.1017/S0016672300026021  1
1984 Hartl DL, Dykhuizen DE, Berg DE. Accessory DNAs in the bacterial gene pool: playground for coevolution. Ciba Foundation Symposium. 102: 233-45. PMID 6319094 DOI: 10.1002/9780470720837.ch15  1
1984 Hartl DL, Dykhuizen DE. The population genetics of Escherichia coli. Annual Review of Genetics. 18: 31-68. PMID 6099090 DOI: 10.1146/Annurev.Ge.18.120184.000335  1
1984 Green L, Miller RD, Dykhuizen DE, Hartl DL. Distribution of DNA insertion element IS5 in natural isolates of Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 81: 4500-4. PMID 6087327 DOI: 10.1073/Pnas.81.14.4500  1
1983 Dykhuizen DE, Hartl DL. Functional effects of PGI allozymes in Escherichia coli. Genetics. 105: 1-18. PMID 6352406  1
1983 Hartl DL, Dykhuizen DE, Miller RD, Green L, de Framond J. Transposable element IS50 improves growth rate of E. coli cells without transposition. Cell. 35: 503-10. PMID 6317194 DOI: 10.1016/0092-8674(83)90184-8  1
1983 Dykhuizen DE, Hartl DL. Selection in chemostats. Microbiological Reviews. 47: 150-68. PMID 6308409 DOI: 10.1128/Mmbr.47.2.150-168.1983  1
1981 Hartl DL, Dykhuizen DE. Potential for selection among nearly neutral allozymes of 6-phosphogluconate dehydrogenase in Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 78: 6344-8. PMID 7031648 DOI: 10.1073/Pnas.78.10.6344  1
1980 Dykhuizen DE, Harrison KM, Richardson BJ. Evolutionary implications of ascorbic acid production in the Australian lungfish. Experientia. 36: 945-6. PMID 7439328 DOI: 10.1007/BF01953807  1
1980 Dykhuizen D, Hartl DL. Selective neutrality of 6PGD allozymes in E. coli and the effects of genetic background. Genetics. 96: 801-17. PMID 7021316  1
1980 Dykhuizen D, Hartl D. Molecular clockwork (reply) Nature. 287: 90. DOI: 10.1038/287090A0  1
1979 Hartl D, Dykhuizen D. A selectively driven molecular clock. Nature. 281: 230-1. PMID 384266 DOI: 10.1038/281230A0  1
1979 del Campillo-Campbell A, Dykhuizen D, Cleary PP. Enzymic reduction of d-biotin d-sulfoxide to d-biotin. Methods in Enzymology. 62: 379-85. PMID 374979 DOI: 10.1016/0076-6879(79)62244-9  1
1978 Campbell JH, Dykhuizen D, Rolfe BG. Effects of the rex gene of phage lambda on lysogeny. Genetical Research. 32: 257-63. PMID 751854 DOI: 10.1017/S0016672300018759  1
1978 Dykhuizen D, Campbell JH, Rolfe BG. The influences of a lambda prophage on the growth rate of Escherichia coli. Microbios. 23: 99-113. PMID 160003  1
1978 Dykhuizen D, Hartl D. Transport by the lactose permease of Escherichia coli as the basis of lactose killing. Journal of Bacteriology. 135: 876-82. PMID 99437 DOI: 10.1128/JB.135.3.876-882.1978  1
1978 Dykhuizen D. Selection for tryptophan auxotrophs of Escherichia coli in glucose-limited chemostats as a test of the energy conservation hypothesis of evolution Evolution. 32: 125-150.  1
1974 Dykhuizen D. Evolution of cell senescence, atherosclerosis and benign tumours. Nature. 251: 616-8. PMID 4425292  1
1974 Cleary PP, Dykhuizen D. Enzymatic reduction of D-biotin-d-sulfoxide with cell-free extracts of Escherichia coli. Biochemical and Biophysical Research Communications. 56: 629-34. PMID 4151191 DOI: 10.1016/0006-291X(74)90651-2  1
1973 Dykhuizen D. Genetic analysis of the system that reduces biotin-d-sulfoxide in Escherichia coli. Journal of Bacteriology. 115: 662-7. PMID 4579877 DOI: 10.1128/Jb.115.2.662-667.1973  1
1972 Shizuya H, Dykhuizen D. Conditional lethality of deletions which include uvrB in strains of Escherichia coli lacking deoxyribonucleic acid polymerase I. Journal of Bacteriology. 112: 676-81. PMID 4563970 DOI: 10.1128/Jb.112.2.676-681.1972  1
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