Kasper D. Hansen - Publications

Affiliations: 
2009 University of California, Berkeley, Berkeley, CA 

34/111 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Nellore A, Wilks C, Hansen KD, Leek JT, Langmead B. Rail-dbGaP: analyzing dbGaP-protected data in the cloud with Amazon Elastic MapReduce. Bioinformatics (Oxford, England). PMID 27153614 DOI: 10.1093/bioinformatics/btw177  0.76
2015 Vandiver AR, Idrizi A, Rizzardi L, Feinberg AP, Hansen KD. DNA methylation is stable during replication and cell cycle arrest. Scientific Reports. 5: 17911. PMID 26648411 DOI: 10.1038/srep17911  0.76
2015 Pacis A, Tailleux L, Morin AM, Lambourne J, Maclsaac JL, Yotova V, Dumaine A, Danckaert A, Luca F, Grenier JC, Hansen KD, Gicquel B, Yu M, Pai A, He C, et al. Bacterial infection remodels the DNA methylation landscape of human dendritic cells. Genome Research. PMID 26392366 DOI: 10.1101/gr.192005.115  0.76
2015 Fortin JP, Hansen KD. Reconstructing A/B compartments as revealed by Hi-C using long-range correlations in epigenetic data. Genome Biology. 16: 180. PMID 26316348 DOI: 10.1186/s13059-015-0741-y  0.76
2015 Vandiver AR, Irizarry RA, Hansen KD, Garza LA, Runarsson A, Li X, Chien AL, Wang TS, Leung SG, Kang S, Feinberg AP. Age and sun exposure-related widespread genomic blocks of hypomethylation in nonmalignant skin. Genome Biology. 16: 80. PMID 25886480 DOI: 10.1186/s13059-015-0644-y  0.76
2015 Hong X, Hao K, Ladd-Acosta C, Hansen KD, Tsai HJ, Liu X, Xu X, Thornton TA, Caruso D, Keet CA, Sun Y, Wang G, Luo W, Kumar R, Fuleihan R, et al. Genome-wide association study identifies peanut allergy-specific loci and evidence of epigenetic mediation in US children. Nature Communications. 6: 6304. PMID 25710614 DOI: 10.1038/ncomms7304  0.76
2015 Huber W, Carey VJ, Gentleman R, Anders S, Carlson M, Carvalho BS, Bravo HC, Davis S, Gatto L, Girke T, Gottardo R, Hahne F, Hansen KD, Irizarry RA, Lawrence M, et al. Orchestrating high-throughput genomic analysis with Bioconductor. Nature Methods. 12: 115-21. PMID 25633503 DOI: 10.1038/nmeth.3252  0.76
2015 Ziller MJ, Hansen KD, Meissner A, Aryee MJ. Coverage recommendations for methylation analysis by whole-genome bisulfite sequencing. Nature Methods. 12: 230-2, 1 p following. PMID 25362363 DOI: 10.1038/nmeth.3152  0.76
2015 Huber W, Carey V, Davis S, Hansen KD, Morgan M. The Bioconductor channel in F1000Research F1000research. 4. DOI: 10.12688/f1000research.6758.1  0.76
2014 Fortin JP, Labbe A, Lemire M, Zanke BW, Hudson TJ, Fertig EJ, Greenwood CM, Hansen KD. Functional normalization of 450k methylation array data improves replication in large cancer studies. Genome Biology. 15: 503. PMID 25599564 DOI: 10.1186/s13059-014-0503-2  0.76
2014 Bjornsson HT, Benjamin JS, Zhang L, Weissman J, Gerber EE, Chen YC, Vaurio RG, Potter MC, Hansen KD, Dietz HC. Histone deacetylase inhibition rescues structural and functional brain deficits in a mouse model of Kabuki syndrome. Science Translational Medicine. 6: 256ra135. PMID 25273096 DOI: 10.1126/scitranslmed.3009278  0.76
2014 Aryee MJ, Jaffe AE, Corrada-Bravo H, Ladd-Acosta C, Feinberg AP, Hansen KD, Irizarry RA. Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays. Bioinformatics (Oxford, England). 30: 1363-9. PMID 24478339 DOI: 10.1093/bioinformatics/btu049  0.76
2014 Frazee AC, Sabunciyan S, Hansen KD, Irizarry RA, Leek JT. Differential expression analysis of RNA-seq data at single-base resolution. Biostatistics (Oxford, England). 15: 413-26. PMID 24398039 DOI: 10.1093/biostatistics/kxt053  0.76
2014 Hansen KD, Sabunciyan S, Langmead B, Nagy N, Curley R, Klein G, Klein E, Salamon D, Feinberg AP. Large-scale hypomethylated blocks associated with Epstein-Barr virus-induced B-cell immortalization. Genome Research. 24: 177-84. PMID 24068705 DOI: 10.1101/gr.157743.113  0.76
2014 Ladd-Acosta C, Hansen KD, Briem E, Fallin MD, Kaufmann WE, Feinberg AP. Common DNA methylation alterations in multiple brain regions in autism. Molecular Psychiatry. 19: 862-71. PMID 23999529 DOI: 10.1038/mp.2013.114  0.76
2014 Fortin JP, Fertig E, Hansen K. shinyMethyl: Interactive quality control of Illumina 450k DNA methylation arrays in R F1000research. 3. DOI: 10.12688/f1000research.4680.2  0.76
2013 Smith ML, Baggerly KA, Bengtsson H, Ritchie ME, Hansen KD. illuminaio: An open source IDAT parsing tool for Illumina microarrays. F1000research. 2: 264. PMID 24701342 DOI: 10.12688/f1000research.2-264.v1  0.76
2012 Hansen KD, Langmead B, Irizarry RA. BSmooth: from whole genome bisulfite sequencing reads to differentially methylated regions. Genome Biology. 13: R83. PMID 23034175 DOI: 10.1186/gb-2012-13-10-r83  0.76
2012 Herb BR, Wolschin F, Hansen KD, Aryee MJ, Langmead B, Irizarry R, Amdam GV, Feinberg AP. Reversible switching between epigenetic states in honeybee behavioral subcastes. Nature Neuroscience. 15: 1371-3. PMID 22983211 DOI: 10.1038/nn.3218  0.76
2012 Tung J, Barreiro LB, Johnson ZP, Hansen KD, Michopoulos V, Toufexis D, Michelini K, Wilson ME, Gilad Y. Social environment is associated with gene regulatory variation in the rhesus macaque immune system. Proceedings of the National Academy of Sciences of the United States of America. 109: 6490-5. PMID 22493251 DOI: 10.1073/pnas.1202734109  0.76
2012 Munshaw S, Hwang HS, Torbenson M, Quinn J, Hansen KD, Astemborski J, Mehta SH, Ray SC, Thomas DL, Balagopal A. Laser captured hepatocytes show association of butyrylcholinesterase gene loss and fibrosis progression in hepatitis C-infected drug users. Hepatology (Baltimore, Md.). 56: 544-54. PMID 22331678 DOI: 10.1002/hep.25655  0.76
2012 Hansen KD, Irizarry RA, Wu Z. Removing technical variability in RNA-seq data using conditional quantile normalization. Biostatistics (Oxford, England). 13: 204-16. PMID 22285995 DOI: 10.1093/biostatistics/kxr054  0.76
2011 Hansen KD, Wu Z, Irizarry RA, Leek JT. Sequencing technology does not eliminate biological variability. Nature Biotechnology. 29: 572-3. PMID 21747377 DOI: 10.1038/nbt.1910  0.76
2011 Hansen KD, Timp W, Bravo HC, Sabunciyan S, Langmead B, McDonald OG, Wen B, Wu H, Liu Y, Diep D, Briem E, Zhang K, Irizarry RA, Feinberg AP. Increased methylation variation in epigenetic domains across cancer types. Nature Genetics. 43: 768-75. PMID 21706001 DOI: 10.1038/ng.865  0.76
2011 Brooks AN, Yang L, Duff MO, Hansen KD, Park JW, Dudoit S, Brenner SE, Graveley BR. Conservation of an RNA regulatory map between Drosophila and mammals. Genome Research. 21: 193-202. PMID 20921232 DOI: 10.1101/gr.108662.110  0.76
2010 Langmead B, Hansen KD, Leek JT. Cloud-scale RNA-sequencing differential expression analysis with Myrna. Genome Biology. 11: R83. PMID 20701754 DOI: 10.1186/gb-2010-11-8-r83  0.76
2010 Hansen KD, Brenner SE, Dudoit S. Biases in Illumina transcriptome sequencing caused by random hexamer priming. Nucleic Acids Research. 38: e131. PMID 20395217 DOI: 10.1093/nar/gkq224  0.76
2010 Bullard JH, Purdom E, Hansen KD, Dudoit S. Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments. Bmc Bioinformatics. 11: 94. PMID 20167110 DOI: 10.1186/1471-2105-11-94  0.76
2009 Hansen KD, Lareau LF, Blanchette M, Green RE, Meng Q, Rehwinkel J, Gallusser FL, Izaurralde E, Rio DC, Dudoit S, Brenner SE. Genome-wide identification of alternative splice forms down-regulated by nonsense-mediated mRNA decay in Drosophila. Plos Genetics. 5: e1000525. PMID 19543372 DOI: 10.1371/journal.pgen.1000525  0.76
2008 Lee A, Hansen KD, Bullard J, Dudoit S, Sherlock G. Novel low abundance and transient RNAs in yeast revealed by tiling microarrays and ultra high-throughput sequencing are not conserved across closely related yeast species. Plos Genetics. 4: e1000299. PMID 19096707 DOI: 10.1371/journal.pgen.1000299  0.76
2008 Andersen JH, Harhoff M, Grimstrup S, Vilstrup I, Lassen CF, Brandt LP, Kryger AI, Overgaard E, Hansen KD, Mikkelsen S. Computer mouse use predicts acute pain but not prolonged or chronic pain in the neck and shoulder. Occupational and Environmental Medicine. 65: 126-31. PMID 17681996 DOI: 10.1136/oem.2007.033506  0.76
2004 Danø H, Jacobsen R, Hansen KD, Petersen JK, Lynge E. Use of census data for construction of fertility history for Danish women. Scandinavian Journal of Public Health. 32: 435-41. PMID 15762028 DOI: 10.1080/14034940410028163  0.76
2004 Nybo Andersen AM, Hansen KD, Andersen PK, Davey Smith G. Advanced paternal age and risk of fetal death: a cohort study. American Journal of Epidemiology. 160: 1214-22. PMID 15583374 DOI: 10.1093/aje/  0.76
2004 Danø H, Hansen KD, Jensen P, Petersen JH, Jacobsen R, Ewertz M, Lynge E. Fertility pattern does not explain social gradient in breast cancer in denmark. International Journal of Cancer. Journal International Du Cancer. 111: 451-6. PMID 15221976 DOI: 10.1002/ijc.20203  0.76
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2019 Gorkin DU, Qiu Y, Hu M, Fletez-Brant K, Liu T, Schmitt AD, Noor A, Chiou J, Gaulton KJ, Sebat J, Li Y, Hansen KD, Ren B. Common DNA sequence variation influences 3-dimensional conformation of the human genome. Genome Biology. 20: 255. PMID 31779666 DOI: 10.1186/s13059-019-1855-4  0.08
2019 Wulfridge P, Langmead B, Feinberg AP, Hansen KD. Analyzing whole genome bisulfite sequencing data from highly divergent genotypes. Nucleic Acids Research. PMID 31392989 DOI: 10.1093/nar/gkz674  0.08
2016 Lauridsen H, Hansen K, Nørgård MØ, Wang T, Pedersen M. From tissue to silicon to plastic: Three-dimensional printing in comparative anatomy and physiology Royal Society Open Science. 3. DOI: 10.1098/rsos.150643  0.08
2012 Uchida N, Chen K, Dohse M, Hansen KD, Dean J, Buser JR, Riddle A, Beardsley DJ, Wan Y, Gong X, Nguyen T, Cummings BJ, Anderson AJ, Tamaki SJ, Tsukamoto A, et al. Human neural stem cells induce functional myelination in mice with severe dysmyelination. Science Translational Medicine. 4: 155ra136. PMID 23052293 DOI: 10.1126/scitranslmed.3004371  0.04
2016 Benjamin JS, Pilarowski GO, Carosso GA, Zhang L, Huso DL, Goff LA, Vernon HJ, Hansen KD, Bjornsson HT. A ketogenic diet rescues hippocampal memory defects in a mouse model of Kabuki syndrome. Proceedings of the National Academy of Sciences of the United States of America. PMID 27999180 DOI: 10.1073/pnas.1611431114  0.04
2015 Kannan L, Ramos M, Re A, El-Hachem N, Safikhani Z, Gendoo DM, Davis S, Gomez-Cabrero D, Castelo R, Hansen KD, Carey VJ, Morgan M, Culhane AC, Haibe-Kains B, Waldron L. Public data and open source tools for multi-assay genomic investigation of disease. Briefings in Bioinformatics. PMID 26463000 DOI: 10.1093/bib/bbv080  0.01
2015 Hansen KD, Rutledge J, Rutigliano N, Kirksey B. An evaluation of soil-cement slope protection for embankments - Stair-stepped vs. plating Association of State Dam Safety Officials, Dam Safety 2015 0.04
2014 Hansen KD, Fitzgerald TJ. Lessons learned in the past ten years regarding the performance of RCC used for overtopping protection and spillways Association of State Dam Safety Officials Annual Conference 2014, Dam Safety 2014. 2: 710-724.  0.04
2013 Hansen KD, Nuss LK. Seismic upgrades for concrete dams - Then and now Association of State Dam Safety Officials Annual Conference 2013, Dam Safety 2013. 2: 1018-1035.  0.04
2012 Uchida N, Chen K, Dohse M, Hansen KD, Dean J, Buser JR, Riddle A, Beardsley DJ, Wan Y, Gong X, Nguyen T, Cummings BJ, Anderson AJ, Tamaki SJ, Tsukamoto A, et al. Human neural stem cells induce functional myelination in mice with severe dysmyelination (Science Translational Medicine (2012) 4, (165er7)) Science Translational Medicine. 4. DOI: 10.1126/scitranslmed.3005469  0.04
2012 Hansen KD, Forbes BA. Some of these dams are not what they are cracked up to be - Thermal performance of RCC dams Association of State Dam Safety Officials - Dam Safety 2012 0.04
2011 Dean JM, Riddle A, Maire J, Hansen KD, Preston M, Barnes AP, Sherman LS, Back SA. An organotypic slice culture model of chronic white matter injury with maturation arrest of oligodendrocyte progenitors. Molecular Neurodegeneration. 6: 46. PMID 21729326 DOI: 10.1186/1750-1326-6-46  0.04
2011 Fitzgerald T, Hansen KD, Marshall T. Hot dam! Mass concrete - Expected vs. actual performance Association of State Dam Safety Officials Annual Conference 2011, Dam Safety 2011. 1: 296-308.  0.04
2011 Hansen KD, Johnson DL. The use of RCC for cofferdams International Journal On Hydropower and Dams. 18: 54-60.  0.04
2011 Hansen KD, Nuss LK. Lessons learned from the earthquake performance of concrete dams: In an update to a 1979 paper on the response of concrete dams to earthquakes, Kenneth D Hansen and Larry K Nuss present details on the earthquake performance of six dams, and discuss their signi!cance for the dam engineering profession International Water Power and Dam Construction. 63: 32-37.  0.04
2008 Hansen KD. Design considerations for small RCC dams International Journal On Hydropower and Dams. 15: 80-82.  0.04
2008 Hansen KD. Surviving the first five years of RCC dams in the US Association of Dam Safety Officials - Dam Safety 2008 0.04
2008 Hansen KD. Lessons from the past International Water Power and Dam Construction. 60: 20-25.  0.04
2007 Fitzgerald TJ, Hansen KD, Bowen JF. Grout enriched RCC: The past and future in the USA Association of State Dam Safety Officials - Dam Safety 2007 0.04
2006 Hansen KD, Campbell DB. RCC overtopping protection- What are the design options? Association of State Dam Safety Officials - Dam Safety 2006, Proceedings From the 2006 Annual Conference 0.04
2005 Choi YK, Hansen KD. RCC/soil-cement: What's the difference? Journal of Materials in Civil Engineering. 17: 371-378. DOI: 10.1061/(ASCE)0899-1561(2005)17:4(371)  0.04
2000 Hansen KD, Schexnayder C. Construction of stair-stepped soil-cement bank protection Proceedings of Sessions of Geo-Denver 2000 - Soil-Cement and Other Construction Practices in Geotechnical Engineering, Gsp 95. 283: 1-12. DOI: 10.1061/40500(283)1  0.04
1998 Hansen KD. Form follows function in RCC dams too International Journal On Hydropower and Dams. 5: 41-45.  0.04
1997 Hansen KD. Current RCC dam activity in the USA International Journal On Hydropower and Dams. 4: 62-65.  0.04
1991 Hansen BC, Hansen KD. Proper role of the Office of Scientific Integrity: institutional vs. federal responsibilities. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 5: 2507-8. PMID 1651263  0.01
1987 Hansen KD. Roller compacted concrete dams worldwide 0.04
1986 Hansen KD. ROLLER COMPACTED CONCRETE DEVELOPMENTS IN THE USA International Water Power and Dam Construction. 38: 9-12.  0.04
1986 Hansen KD, France JW. RCC: a dam rehab solution unearthed Civ. Engng. (Asce). 56.  0.04
1979 Hansen KD, Roehm LH. RESPONSE OF CONCRETE DAMS TO EARTHQUAKES Int Water Power Dam Constr. 31: 27-31.  0.04
1978 Hansen KD, Avera JK. DAMS THAT NEVER END Int Water Power Dam Constr. 30: 25-27.  0.04
1976 Hansen KD, Omenn GS. Genetic counseling: the search for the adopted child. The Journal of Legal Medicine. 4: 8AA-8FF. PMID 1086333  0.01
2020 Lee I, Razaghi R, Gilpatrick T, Molnar M, Gershman A, Sadowski N, Sedlazeck FJ, Hansen KD, Simpson JT, Timp W. Simultaneous profiling of chromatin accessibility and methylation on human cell lines with nanopore sequencing. Nature Methods. PMID 33230324 DOI: 10.1038/s41592-020-01000-7  0.01
2020 Boukas L, Bjornsson HT, Hansen KD. Promoter CpG Density Predicts Downstream Gene Loss-of-Function Intolerance. American Journal of Human Genetics. PMID 32800095 DOI: 10.1016/j.ajhg.2020.07.014  0.01
2020 Rajagopalan S, Park B, Palanivel R, Vinayachandran V, Deiuliis JA, Gangwar RS, Das LM, Yin J, Choi Y, Al-Kindi S, Jain MK, Hansen KD, Biswal S. Metabolic effects of air pollution exposure and reversibility. The Journal of Clinical Investigation. PMID 32780721 DOI: 10.1172/JCI137315  0.01
2020 Credle JJ, Robinson ML, Gunn J, Monaco D, Sie B, Tchir A, Hardick J, Zheng X, Shaw-Saliba K, Rothman RE, Eshleman SH, Pekosz A, Hansen K, Mostafa H, Steinegger M, et al. Highly multiplexed oligonucleotide probe-ligation testing enables efficient extraction-free SARS-CoV-2 detection and viral genotyping. Biorxiv : the Preprint Server For Biology. PMID 32577648 DOI: 10.1101/2020.06.03.130591  0.01
2019 Fahrner JA, Lin WY, Riddle RC, Boukas L, DeLeon VB, Chopra S, Lad SE, Luperchio TR, Hansen KD, Bjornsson HT. Precocious chondrocyte differentiation disrupts skeletal growth in Kabuki Syndrome mice. Jci Insight. PMID 31557133 DOI: 10.1172/jci.insight.129380  0.01
2019 Myint L, Wang R, Boukas L, Hansen KD, Goff LA, Avramopoulos D. A screen of 1,049 schizophrenia and 30 Alzheimer's-associated variants for regulatory potential. American Journal of Medical Genetics. Part B, Neuropsychiatric Genetics : the Official Publication of the International Society of Psychiatric Genetics. PMID 31503409 DOI: 10.1002/ajmg.b.32761  0.01
2019 Carosso GA, Boukas L, Augustin JJ, Nguyen HN, Winer BL, Cannon GH, Robertson JD, Zhang L, Hansen KD, Goff LA, Bjornsson HT. Precocious neuronal differentiation and disrupted oxygen responses in Kabuki syndrome. Jci Insight. PMID 31465303 DOI: 10.1172/jci.insight.129375  0.01
2019 Myint L, Avramopoulos DG, Goff LA, Hansen KD. Linear models enable powerful differential activity analysis in massively parallel reporter assays. Bmc Genomics. 20: 209. PMID 30866806 DOI: 10.1186/s12864-019-5556-x  0.01
2019 Boukas L, Havrilla JM, Hickey PF, Quinlan AR, Bjornsson HT, Hansen KD. Coexpression patterns define epigenetic regulators associated with neurological dysfunction. Genome Research. PMID 30858344 DOI: 10.1101/gr.239442.118  0.01
2019 Rizzardi LF, Hickey PF, Rodriguez DiBlasi V, Tryggvadóttir R, Callahan CM, Idrizi A, Hansen KD, Feinberg AP. Neuronal brain-region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability. Nature Neuroscience. PMID 30643296 DOI: 10.1038/s41593-018-0297-8  0.01
2018 Gaysinskaya V, Miller BF, De Luca C, van der Heijden GW, Hansen KD, Bortvin A. Transient reduction of DNA methylation at the onset of meiosis in male mice. Epigenetics & Chromatin. 11: 15. PMID 29618374 DOI: 10.1186/s13072-018-0186-0  0.01
2017 Barrington WT, Wulfridge P, Wells AE, Rojas CM, Howe SYF, Perry A, Hua K, Pellizzon MA, Hansen KD, Voy BH, Bennett BJ, Pomp D, Feinberg AP, Threadgill DW. Improving Metabolic Health Through Precision Dietetics in Mice. Genetics. PMID 29158425 DOI: 10.1534/genetics.117.300536  0.01
2017 Ramos M, Schiffer L, Re A, Azhar R, Basunia A, Rodriguez C, Chan T, Chapman P, Davis SR, Gomez-Cabrero D, Culhane AC, Haibe-Kains B, Hansen KD, Kodali H, Louis MS, et al. Software for the Integration of Multiomics Experiments in Bioconductor. Cancer Research. 77: e39-e42. PMID 29092936 DOI: 10.1158/0008-5472.CAN-17-0344  0.01
2017 Collado-Torres L, Nellore A, Kammers K, Ellis SE, Taub MA, Hansen KD, Jaffe AE, Langmead B, Leek JT. Reproducible RNA-seq analysis using recount2. Nature Biotechnology. 35: 319-321. PMID 28398307 DOI: 10.1038/nbt.3838  0.01
2017 Nørlinger TS, Nielsen PM, Qi H, Mikkelsen E, Hansen K, Schmidt NH, Pedersen M, Agger P, Palm F, Laustsen C. Hyperbaric oxygen therapy reduces renal lactate production. Physiological Reports. 5. PMID 28336821 DOI: 10.14814/phy2.13217  0.01
2017 Zheng SC, Beck S, Jaffe AE, Koestler DC, Hansen KD, Houseman AE, Irizarry RA, Teschendorff AE. Correcting for cell-type heterogeneity in epigenome-wide association studies: revisiting previous analyses. Nature Methods. 14: 216-217. PMID 28245219 DOI: 10.1038/nmeth.4187  0.01
2017 Myint L, Kleensang A, Zhao L, Hartung T, Hansen KD. Joint bounding of peaks across samples improves differential analysis in mass spectrometry-based metabolomics. Analytical Chemistry. PMID 28221771 DOI: 10.1021/acs.analchem.6b04719  0.01
2016 Nellore A, Jaffe AE, Fortin JP, Alquicira-Hernández J, Collado-Torres L, Wang S, Phillips Iii RA, Karbhari N, Hansen KD, Langmead B, Leek JT. Human splicing diversity and the extent of unannotated splice junctions across human RNA-seq samples on the Sequence Read Archive. Genome Biology. 17: 266. PMID 28038678 DOI: 10.1186/s13059-016-1118-6  0.01
2016 Fortin JP, Triche TJ, Hansen KD. Preprocessing, normalization and integration of the Illumina HumanMethylationEPIC array with minfi. Bioinformatics (Oxford, England). PMID 28035024 DOI: 10.1093/bioinformatics/btw691  0.01
2016 Andrews SV, Ladd-Acosta C, Feinberg AP, Hansen KD, Fallin MD. "Gap hunting" to characterize clustered probe signals in Illumina methylation array data. Epigenetics & Chromatin. 9: 56. PMID 27980682 DOI: 10.1186/s13072-016-0107-z  0.01
2016 Li X, Liu Y, Salz T, Hansen KD, Feinberg AP. Whole genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver. Genome Research. PMID 27737935 DOI: 10.1101/gr.211854.116  0.01
2015 Huber W, Carey V, Davis S, Hansen KD, Morgan M. The Bioconductor channel in F1000Research. F1000research. 4: 217. PMID 26998224 DOI: 10.12688/f1000research.6758.2  0.01
2015 Gatto L, Hansen KD, Hoopmann MR, Hermjakob H, Kohlbacher O, Beyer A. Testing and validation of computational methods for mass spectrometry. Journal of Proteome Research. PMID 26549429 DOI: 10.1021/acs.jproteome.5b00852  0.01
2015 Gografe SI, Hansen BC, Hansen KD. Deep subconjunctival injection of gentamicin for the treatment of bacterial conjunctivitis in macaques (Macaca mulatta and Macaca fascicularis). Lab Animal. 44: 92-6. PMID 25693106 DOI: 10.1038/laban.661  0.01
2014 Frazee AC, Hansen KD, Leek JT, Sabunciyan S, Irizarry RA. Corrigendum: Differential expression analysis of RNA-seq data at single-base resolution Biostatistics. 15: 584-585. DOI: 10.1093/biostatistics/kxu022  0.01
2013 Hansen KD, Jirikowic T. A comparison of the sensory profile and sensory processing measure home form for children with fetal alcohol spectrum disorders. Physical & Occupational Therapy in Pediatrics. 33: 440-52. PMID 23663112 DOI: 10.3109/01942638.2013.791914  0.01
2013 Hansen KD, Garcia-Ruiz F, Kazmi W, Bisgaard M, La Cour-Harbo A, Rasmussen J, Andersen HJ. An autonomous robotic system for mapping weeds in fields Ifac Proceedings Volumes (Ifac-Papersonline). 8: 217-224. DOI: 10.3182/20130626-3-AU-2035.00055  0.01
2009 Hertzum M, Hansen KD, Andersen HHK. Scrutinising usability evaluation: Does thinking aloud affect behaviour and mental workload? Behaviour and Information Technology. 28: 165-181. DOI: 10.1080/01449290701773842  0.01
2008 Juhnke GA, Coll KM, Evans M, Sunich MF, Hansen KD, Valadez A. A modified infidelity debriefing process for couples who have recently experienced infidelity disclosure Family Journal. 16: 308-315. DOI: 10.1177/1066480708323202  0.01
2003 Danø H, Kasper Daniel Hansen K, Marianne Ewertz M, Jørgen Holm Petersen J, Elsebeth Lynge E. 725 Socio-economic status and breast cancer in Denmark European Journal of Cancer Supplements. 1: S219. DOI: 10.1016/S1359-6349(03)90756-7  0.01
2001 Olsen J, Melbye M, Olsen SF, Sørensen TI, Aaby P, Andersen AM, Taxbøl D, Hansen KD, Juhl M, Schow TB, Sørensen HT, Andresen J, Mortensen EL, Olesen AW, Søndergaard C. The Danish National Birth Cohort--its background, structure and aim. Scandinavian Journal of Public Health. 29: 300-7. PMID 11775787  0.01
1997 Hameed IA, Cour-Harbo AL, Hansen KD. Task and motion planning for selective weed conrol using a team of autonomous vehicles 2014 13th International Conference On Control Automation Robotics and Vision, Icarcv 2014. 1853-1857. DOI: 10.1109/ICARCV.2014.7064598  0.01
1996 Lehr HA, Hansen KD, Coltrera MD, Russ JC, Gown AM. Photoshop-based image analysis for the semiautomated assessment of Ki-67-defined proliferative activity in the routine diagnosis of breast cancer Applied Immunohistochemistry and Molecular Morphology. 4: 117-127.  0.01
1995 Hansen BC, Hansen KD. Academic and scientific misconduct: issues for nursing educators. Journal of Professional Nursing : Official Journal of the American Association of Colleges of Nursing. 11: 31-9. PMID 7844280 DOI: 10.1016/S8755-7223(95)80070-0  0.01
1994 Althoen SC, Hansen KD, Kugler LD. Fused Four-Dimensional Real Division Algebras Journal of Algebra. 170: 649-660. DOI: 10.1006/jabr.1994.1358  0.01
1993 Hansen KD. Medical malpractice: Handling ophthalmology cases Journal of Legal Medicine. 14: 173-176. DOI: 10.1080/01947649309510910  0.01
1992 Althoen SC, Hansen KD, Kugler LD. Rotational scaled quaternion division algebras Journal of Algebra. 146: 124-143. DOI: 10.1016/0021-8693(92)90058-T  0.01
1991 Hansen BC, Hansen KD. PHS misconduct procedures. Science (New York, N.Y.). 252: 1768. PMID 2063189  0.01
1991 Hansen KD, Hansen BC. Scientific fraud and the Public Health Service Act: a critical analysis. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 5: 2512-5. PMID 1868976  0.01
1991 Loeb MR, Hansen BC, Hansen KD. Scientific fraud [1] Faseb Journal. 5: 3117. PMID 1660423  0.01
1981 Wolter JR, Hansen KD. Intimo-intimal intussusception of the central retinal artery. American Journal of Ophthalmology. 92: 486-91. PMID 7294111  0.01
1980 Hansen KD, Omenn GS. Genetic isolation of adoptees. Journal of Pediatric Ophthalmology and Strabismus. 17: 215-9. PMID 7411331  0.01
1980 Hansen KD. When alternate treatment plans collide, or the intern's quandary. Progress in Clinical and Biological Research. 38: 111-5. PMID 7384100  0.01
1980 Hansen KD, Meyer RF. Amikacin treatment of Pseudomonas-caused corneal ulcer. Archives of Ophthalmology (Chicago, Ill. : 1960). 98: 1991-2. PMID 6776941 DOI: 10.1001/archopht.1980.01020040843009  0.01
1980 Omenn GS, Hall JG, Hansen KD. Genetic counseling for adoptees at risk for specific inherited disorders. American Journal of Medical Genetics. 5: 157-64. PMID 6446856 DOI: 10.1002/ajmg.1320050209  0.01
1976 Holtz WG, Hansen KD. The use of compacted soil-cement in water control structures 0.01
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