| Year |
Citation |
Score |
| 2025 |
Mtawali M, Cooney EC, Adams J, Jin J, Holt CC, Keeling PJ. Phylogenomic resolution of marine to freshwater dinoflagellate transitions. The Isme Journal. PMID 39982435 DOI: 10.1093/ismejo/wraf031 |
0.369 |
|
| 2024 |
Cooney EC, Leander BS, Keeling PJ. Hidden syndinian and perkinsid infections in dinoflagellate hosts revealed by single-cell transcriptomics. The Isme Journal. PMID 39325969 DOI: 10.1093/ismejo/wrae188 |
0.618 |
|
| 2024 |
Lax G, Park E, Na I, Jacko-Reynolds V, Kwong WK, House CSE, Trznadel M, Wakeman K, Leander BS, Keeling P. Phylogenomic diversity of archigregarine apicomplexans. Open Biology. 14: 240141. PMID 39317333 DOI: 10.1098/rsob.240141 |
0.642 |
|
| 2024 |
Cooney EC, Jacobson DM, Wolfe GV, Bright KJ, Saldarriaga JF, Keeling PJ, Leander BS, Strom SL. Morphology, behavior, and phylogenomics of Oxytoxum lohmannii, Dinoflagellata. The Journal of Eukaryotic Microbiology. e13050. PMID 39019843 DOI: 10.1111/jeu.13050 |
0.758 |
|
| 2024 |
Cho A, Lax G, Keeling PJ. Phylogenomic analyses of ochrophytes (stramenopiles) with an emphasis on neglected lineages. Molecular Phylogenetics and Evolution. 108120. PMID 38852907 DOI: 10.1016/j.ympev.2024.108120 |
0.323 |
|
| 2024 |
Boscaro V, James ER, Fiorito R, Del Campo J, Scheffrahn RH, Keeling PJ. Updated classification of the phylum Parabasalia. The Journal of Eukaryotic Microbiology. e13035. PMID 38825738 DOI: 10.1111/jeu.13035 |
0.33 |
|
| 2024 |
Cooney EC, Holt CC, Hehenberger E, Adams JA, Leander BS, Keeling PJ. Investigation of heterotrophs reveals new insights in dinoflagellate evolution. Molecular Phylogenetics and Evolution. 108086. PMID 38677354 DOI: 10.1016/j.ympev.2024.108086 |
0.647 |
|
| 2024 |
Cho A, Lax G, Livingston SJ, Masukagami Y, Naumova M, Millar O, Husnik F, Keeling PJ. Genomic analyses of Symbiomonas scintillans show no evidence for endosymbiotic bacteria but does reveal the presence of giant viruses. Plos Genetics. 20: e1011218. PMID 38557755 DOI: 10.1371/journal.pgen.1011218 |
0.757 |
|
| 2024 |
Na I, Campos C, Lax G, Kwong WK, Keeling PJ. Phylogenomics reveals Adeleorina are an ancient and distinct subgroup of Apicomplexa. Molecular Phylogenetics and Evolution. 195: 108060. PMID 38485105 DOI: 10.1016/j.ympev.2024.108060 |
0.423 |
|
| 2024 |
Lax G, Okamoto N, Keeling PJ. Phylogenomic position of eupelagonemids, abundant and diverse deep-ocean heterotrophs. The Isme Journal. PMID 38457644 DOI: 10.1093/ismejo/wrae040 |
0.41 |
|
| 2024 |
Keeling PJ. Horizontal gene transfer in eukaryotes: aligning theory with data. Nature Reviews. Genetics. PMID 38263430 DOI: 10.1038/s41576-023-00688-5 |
0.322 |
|
| 2023 |
Cho A, Tikhonenkov DV, Lax G, Prokina KI, Keeling PJ. Phylogenomic position of genetically diverse phagotrophic stramenopile flagellates in the sediment-associated MAST-6 lineage and a potentially halotolerant placididean. Molecular Phylogenetics and Evolution. 107964. PMID 37951557 DOI: 10.1016/j.ympev.2023.107964 |
0.313 |
|
| 2023 |
Holt CC, Hehenberger E, Tikhonenkov DV, Jacko-Reynolds VKL, Okamoto N, Cooney EC, Irwin NAT, Keeling PJ. Multiple parallel origins of parasitic Marine Alveolates. Nature Communications. 14: 7049. PMID 37923716 DOI: 10.1038/s41467-023-42807-0 |
0.382 |
|
| 2023 |
Cooney EC, Holt CC, Jacko-Reynolds VKL, Leander BS, Keeling PJ. Photosystems in the eye-like organelles of heterotrophic warnowiid dinoflagellates. Current Biology : Cb. PMID 37703877 DOI: 10.1016/j.cub.2023.08.052 |
0.55 |
|
| 2023 |
Park E, Cooney E, Phua YH, Horiguchi T, Husnik F, Keeling P, Wakeman K, Leander B. Phylogenomics shows that novel tapeworm-like traits of haplozoan parasites evolved from within the Peridiniales (Dinoflagellata). Molecular Phylogenetics and Evolution. 186: 107859. PMID 37329929 DOI: 10.1016/j.ympev.2023.107859 |
0.79 |
|
| 2023 |
Hehenberger E, Boscaro V, James ER, Hirakawa Y, Trznadel M, Mtawali M, Fiorito R, Del Campo J, Karnkowska A, Kolisko M, Irwin NAT, Mathur V, Scheffrahn RH, Keeling PJ. New Parabasalia symbionts Snyderella spp. and Daimonympha gen. nov. from South American Rugitermes termites and the parallel evolution of a cell with a rotating "head". The Journal of Eukaryotic Microbiology. e12987. PMID 37282792 DOI: 10.1111/jeu.12987 |
0.677 |
|
| 2023 |
Žárský V, Karnkowska A, Boscaro V, Trznadel M, Whelan TA, Hiltunen-Thorén M, Onut-Brännström I, Abbott CL, Fast NM, Burki F, Keeling PJ. Contrasting outcomes of genome reduction in mikrocytids and microsporidians. Bmc Biology. 21: 137. PMID 37280585 DOI: 10.1186/s12915-023-01635-w |
0.365 |
|
| 2023 |
George EE, Barcytė D, Lax G, Livingston S, Tashyreva D, Husnik F, Lukeš J, Eliáš M, Keeling PJ. A single cryptomonad cell harbors a complex community of organelles, bacteria, a phage, and selfish elements. Current Biology : Cb. PMID 37116483 DOI: 10.1016/j.cub.2023.04.010 |
0.764 |
|
| 2023 |
Karnkowska A, Yubuki N, Maruyama M, Yamaguchi A, Kashiyama Y, Suzaki T, Keeling PJ, Hampl V, Leander BS. Euglenozoan kleptoplasty illuminates the early evolution of photoendosymbiosis. Proceedings of the National Academy of Sciences of the United States of America. 120: e2220100120. PMID 36927158 DOI: 10.1073/pnas.2220100120 |
0.805 |
|
| 2023 |
Onuț-Brännström I, Stairs CW, Campos KIA, Hiltunen Thorén M, Ettema TJG, Keeling PJ, Bass D, Burki F. A mitosome with distinct metabolism in the uncultured protist parasite Paramikrocytos canceri (Rhizaria, Ascetosporea). Genome Biology and Evolution. PMID 36790104 DOI: 10.1093/gbe/evad022 |
0.31 |
|
| 2023 |
Giannotti D, Boscaro V, Husnik F, Vannini C, Keeling PJ. At the threshold of symbiosis: the genome of obligately endosymbiotic ' Nebulobacter yamunensis' is almost indistinguishable from that of a cultivable strain. Microbial Genomics. 8. PMID 36748607 DOI: 10.1099/mgen.0.000909 |
0.753 |
|
| 2023 |
Mathur V, Salomaki ED, Wakeman KC, Na I, Kwong WK, Kolisko M, Keeling PJ. Reconstruction of plastid proteomes of apicomplexans and close relatives reveals the major evolutionary outcomes of cryptic plastids. Molecular Biology and Evolution. PMID 36610734 DOI: 10.1093/molbev/msad002 |
0.708 |
|
| 2022 |
Cooney EC, Leander BS, Keeling PJ. Phylogenomics shows unique traits in Noctilucales are derived rather than ancestral. Pnas Nexus. 1: pgac202. PMID 36714854 DOI: 10.1093/pnasnexus/pgac202 |
0.633 |
|
| 2022 |
Tikhonenkov DV, Mikhailov KV, Gawryluk RMR, Belyaev AO, Mathur V, Karpov SA, Zagumyonnyi DG, Borodina AS, Prokina KI, Mylnikov AP, Aleoshin VV, Keeling PJ. Microbial predators form a new supergroup of eukaryotes. Nature. PMID 36477531 DOI: 10.1038/s41586-022-05511-5 |
0.322 |
|
| 2022 |
Holt CC, Boscaro V, Van Steenkiste NWL, Herranz M, Mathur V, Irwin NAT, Buckholtz G, Leander BS, Keeling PJ. Microscopic marine invertebrates are reservoirs for cryptic and diverse protists and fungi. Microbiome. 10: 161. PMID 36180959 DOI: 10.1186/s40168-022-01363-3 |
0.602 |
|
| 2022 |
Ocaña-Pallarès E, Williams TA, López-Escardó D, Arroyo AS, Pathmanathan JS, Bapteste E, Tikhonenkov DV, Keeling PJ, Szöllősi GJ, Ruiz-Trillo I. Divergent genomic trajectories predate the origin of animals and fungi. Nature. PMID 36002568 DOI: 10.1038/s41586-022-05110-4 |
0.677 |
|
| 2022 |
Boscaro V, Syberg-Olsen MJ, Irwin NAT, George EE, Vannini C, Husnik F, Keeling PJ. All essential endosymbionts of the ciliate Euplotes are cyclically replaced. Current Biology : Cb. PMID 35839761 DOI: 10.1016/j.cub.2022.06.052 |
0.719 |
|
| 2022 |
Syberg-Olsen MJ, Garber AI, Keeling PJ, McCutcheon JP, Husnik F. Pseudofinder: detection of pseudogenes in prokaryotic genomes. Molecular Biology and Evolution. PMID 35801562 DOI: 10.1093/molbev/msac153 |
0.807 |
|
| 2022 |
George EE, Tashyreva D, Kwong WK, Okamoto N, Horák A, Husnik F, Lukeš J, Keeling PJ. Gene Transfer Agents in Bacterial Endosymbionts of Microbial Eukaryotes. Genome Biology and Evolution. PMID 35738252 DOI: 10.1093/gbe/evac099 |
0.752 |
|
| 2022 |
Okamoto N, Keeling PJ, Leander BS, Tai V. Microbial communities in sandy beaches from the three domains of life differ by microhabitat and intertidal location. Molecular Ecology. PMID 35364623 DOI: 10.1111/mec.16453 |
0.687 |
|
| 2022 |
Tashyreva D, Simpson AGB, Prokopchuk G, Škodová-Sveráková I, Butenko A, Hammond M, George EE, Flegontova O, Záhonová K, Faktorová D, Yabuki A, Horák A, Keeling PJ, Lukeš J. Diplonemids - A Review on "New" Flagellates on the Oceanic Block. Protist. 173: 125868. PMID 35339983 DOI: 10.1016/j.protis.2022.125868 |
0.344 |
|
| 2022 |
Giannotti D, Boscaro V, Husnik F, Vannini C, Keeling PJ. The 'other' : an overview of the family ' Midichloriaceae'. Applied and Environmental Microbiology. aem0243221. PMID 35108076 DOI: 10.1128/aem.02432-21 |
0.741 |
|
| 2021 |
Irwin NAT, Pittis AA, Richards TA, Keeling PJ. Systematic evaluation of horizontal gene transfer between eukaryotes and viruses. Nature Microbiology. PMID 34972821 DOI: 10.1038/s41564-021-01026-3 |
0.307 |
|
| 2021 |
Schön ME, Zlatogursky VV, Singh RP, Poirier C, Wilken S, Mathur V, Strassert JFH, Pinhassi J, Worden AZ, Keeling PJ, Ettema TJG, Wideman JG, Burki F. Single cell genomics reveals plastid-lacking Picozoa are close relatives of red algae. Nature Communications. 12: 6651. PMID 34789758 DOI: 10.1038/s41467-021-26918-0 |
0.772 |
|
| 2021 |
Husnik F, Tashyreva D, Boscaro V, George EE, Lukeš J, Keeling PJ. Bacterial and archaeal symbioses with protists. Current Biology : Cb. 31: R862-R877. PMID 34256922 DOI: 10.1016/j.cub.2021.05.049 |
0.729 |
|
| 2021 |
Mathur V, Wakeman KC, Keeling PJ. Parallel functional reduction in the mitochondria of apicomplexan parasites. Current Biology : Cb. 31: 2920-2928.e4. PMID 33974849 DOI: 10.1016/j.cub.2021.04.028 |
0.348 |
|
| 2021 |
Singh RA, Boscaro V, James ER, Karnkowska A, Kolisko M, Gavelis GS, Okamoto N, Del Campo J, Fiorito R, Hehenberger E, Irwin NAT, Mathur V, Scheffrahn RH, Keeling PJ. Characterization of new cristamonad species from kalotermitid termites including a novel genus, Runanympha. Scientific Reports. 11: 7270. PMID 33790354 DOI: 10.1038/s41598-021-86645-w |
0.658 |
|
| 2021 |
Mathur V, Kwong WK, Husnik F, Irwin NAT, Kristmundsson Á, Gestal C, Freeman M, Keeling PJ. Phylogenomics Identifies a New Major Subgroup of Apicomplexans, Marosporida class nov., with Extreme Apicoplast Genome Reduction. Genome Biology and Evolution. 13. PMID 33566096 DOI: 10.1093/gbe/evaa244 |
0.762 |
|
| 2021 |
Tikhonenkov DV, Gawryluk RMR, Mylnikov AP, Keeling PJ. First finding of free-living representatives of Prokinetoplastina and their nuclear and mitochondrial genomes. Scientific Reports. 11: 2946. PMID 33536456 DOI: 10.1038/s41598-021-82369-z |
0.34 |
|
| 2020 |
Del Campo J, Heger TJ, Rodríguez-Martínez R, Worden AZ, Richards TA, Massana R, Keeling PJ. Corrigendum: Assessing the Diversity and Distribution of Apicomplexans in Host and Free-Living Environments Using High-Throughput Amplicon Data and a Phylogenetically Informed Reference Framework. Frontiers in Microbiology. 11: 576322. PMID 33133045 DOI: 10.3389/fmicb.2020.576322 |
0.534 |
|
| 2020 |
Cooney EC, Okamoto N, Cho A, Hehenberger E, Richards TA, Santoro AE, Worden AZ, Leander BS, Keeling PJ. Single cell transcriptomics of ABEDINIUM reveals a new early-branching dinoflagellate lineage. Genome Biology and Evolution. PMID 33045041 DOI: 10.1093/gbe/evaa196 |
0.651 |
|
| 2020 |
Massana R, Labarre A, López-Escardó D, Obiol A, Bucchini F, Hackl T, Fischer MG, Vandepoele K, Tikhonenkov DV, Husnik F, Keeling PJ. Gene expression during bacterivorous growth of a widespread marine heterotrophic flagellate. The Isme Journal. PMID 32920602 DOI: 10.1038/S41396-020-00770-4 |
0.787 |
|
| 2020 |
Tikhonenkov DV, Strassert JFH, Janouškovec J, Mylnikov AP, Aleoshin VV, Burki F, Keeling PJ. Predatory colponemids are the sister group to all other alveolates. Molecular Phylogenetics and Evolution. 106839. PMID 32325195 DOI: 10.1016/J.Ympev.2020.106839 |
0.825 |
|
| 2020 |
Faktorová D, Nisbet RER, Fernández Robledo JA, Casacuberta E, Sudek L, Allen AE, Ares M, Aresté C, Balestreri C, Barbrook AC, Beardslee P, Bender S, Booth DS, Bouget FY, Bowler C, ... ... Keeling PJ, et al. Publisher Correction: Genetic tool development in marine protists: emerging model organisms for experimental cell biology. Nature Methods. PMID 32296171 DOI: 10.1038/S41592-020-0828-6 |
0.767 |
|
| 2020 |
Hehenberger E, Eitel M, Fortunato SAV, Miller DJ, Keeling PJ, Cahill MA. Early eukaryotic origins and metazoan elaboration of MAPR family proteins. Molecular Phylogenetics and Evolution. 106814. PMID 32278076 DOI: 10.1016/J.Ympev.2020.106814 |
0.344 |
|
| 2020 |
Tikhonenkov DV, Hehenberger E, Esaulov AS, Belyakova OI, Mazei YA, Mylnikov AP, Keeling PJ. Insights into the origin of metazoan multicellularity from predatory unicellular relatives of animals. Bmc Biology. 18: 39. PMID 32272915 DOI: 10.1186/S12915-020-0762-1 |
0.326 |
|
| 2020 |
Faktorová D, Nisbet RER, Fernández Robledo JA, Casacuberta E, Sudek L, Allen AE, Ares M, Aresté C, Balestreri C, Barbrook AC, Beardslee P, Bender S, Booth DS, Bouget FY, Bowler C, ... ... Keeling PJ, et al. Genetic tool development in marine protists: emerging model organisms for experimental cell biology. Nature Methods. PMID 32251396 DOI: 10.1038/S41592-020-0796-X |
0.798 |
|
| 2020 |
Butenko A, Opperdoes FR, Flegontova O, Horák A, Hampl V, Keeling P, Gawryluk RMR, Tikhonenkov D, Flegontov P, Lukeš J. Evolution of metabolic capabilities and molecular features of diplonemids, kinetoplastids, and euglenids. Bmc Biology. 18: 23. PMID 32122335 DOI: 10.1186/S12915-020-0754-1 |
0.417 |
|
| 2020 |
George EE, Husnik F, Tashyreva D, Prokopchuk G, Horák A, Kwong WK, Lukeš J, Keeling PJ. Highly Reduced Genomes of Protist Endosymbionts Show Evolutionary Convergence. Current Biology : Cb. PMID 31978335 DOI: 10.1016/J.Cub.2019.12.070 |
0.771 |
|
| 2020 |
Rodríguez-Martínez R, Leonard G, Milner DS, Sudek S, Conway M, Moore K, Hudson T, Mahé F, Keeling PJ, Santoro AE, Worden AZ, Richards TA. Controlled sampling of ribosomally active protistan diversity in sediment-surface layers identifies putative players in the marine carbon sink. The Isme Journal. PMID 31919469 DOI: 10.1038/S41396-019-0581-Y |
0.34 |
|
| 2020 |
Keeling PJ, Boscaro V, Bardell F, Burki F, Cho A, Cooney EC, del Campo J, Fast NM, Fiorito R, Gavelis GS, Gawryluk RMR, George EE, Gomm-Kolisko RN, Grisdale CJ, Heger T, et al. A letter to Denis Lynn Aquatic Ecosystem Health & Management. 23: 17-18. DOI: 10.1080/14634988.2020.1717827 |
0.741 |
|
| 2019 |
Wideman JG, Monier A, Rodríguez-Martínez R, Leonard G, Cook E, Poirier C, Maguire F, Milner DS, Irwin NAT, Moore K, Santoro AE, Keeling PJ, Worden AZ, Richards TA. Unexpected mitochondrial genome diversity revealed by targeted single-cell genomics of heterotrophic flagellated protists. Nature Microbiology. PMID 31768028 DOI: 10.1038/S41564-019-0605-4 |
0.435 |
|
| 2019 |
Del Campo J, Heger TJ, Rodríguez-Martínez R, Worden AZ, Richards TA, Massana R, Keeling PJ. Assessing the Diversity and Distribution of Apicomplexans in Host and Free-Living Environments Using High-Throughput Amplicon Data and a Phylogenetically Informed Reference Framework. Frontiers in Microbiology. 10: 2373. PMID 31708883 DOI: 10.3389/Fmicb.2019.02373 |
0.668 |
|
| 2019 |
Keeling PJ. Combining morphology, behaviour and genomics to understand the evolution and ecology of microbial eukaryotes. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 374: 20190085. PMID 31587641 DOI: 10.1098/Rstb.2019.0085 |
0.462 |
|
| 2019 |
Needham DM, Yoshizawa S, Hosaka T, Poirier C, Choi CJ, Hehenberger E, Irwin NAT, Wilken S, Yung CM, Bachy C, Kurihara R, Nakajima Y, Kojima K, Kimura-Someya T, Leonard G, ... ... Keeling PJ, et al. A distinct lineage of giant viruses brings a rhodopsin photosystem to unicellular marine predators. Proceedings of the National Academy of Sciences of the United States of America. PMID 31548428 DOI: 10.1073/Pnas.1907517116 |
0.44 |
|
| 2019 |
Starko S, Soto Gomez M, Darby H, Demes KW, Kawai H, Yotsukura N, Lindstrom SC, Keeling PJ, Graham SW, Martone PT. Corrigendum to "A comprehensive kelp phylogeny sheds light on the evolution of an ecosystem" [Mol. Phylogenet. Evol. 136 (2019) 138-150]. Molecular Phylogenetics and Evolution. 140: 106625. PMID 31542344 DOI: 10.1016/J.Ympev.2019.106625 |
0.311 |
|
| 2019 |
Treitli SC, Kolisko M, Husník F, Keeling PJ, Hampl V. Revealing the metabolic capacity of and its bacterial symbionts using single-cell metagenomics. Proceedings of the National Academy of Sciences of the United States of America. PMID 31492817 DOI: 10.1073/Pnas.1910793116 |
0.815 |
|
| 2019 |
Husnik F, Keeling PJ. The fate of obligate endosymbionts: reduction, integration, or extinction. Current Opinion in Genetics & Development. 58: 1-8. PMID 31470232 DOI: 10.1016/J.Gde.2019.07.014 |
0.732 |
|
| 2019 |
Keeling PJ, Burki F. Progress towards the Tree of Eukaryotes. Current Biology : Cb. 29: R808-R817. PMID 31430481 DOI: 10.1016/J.Cub.2019.07.031 |
0.423 |
|
| 2019 |
Hehenberger E, Gast RJ, Keeling PJ. A kleptoplastidic dinoflagellate and the tipping point between transient and fully integrated plastid endosymbiosis. Proceedings of the National Academy of Sciences of the United States of America. PMID 31427512 DOI: 10.1073/Pnas.1910121116 |
0.403 |
|
| 2019 |
Mathur V, Kolísko M, Hehenberger E, Irwin NAT, Leander BS, Kristmundsson Á, Freeman MA, Keeling PJ. Multiple Independent Origins of Apicomplexan-Like Parasites. Current Biology : Cb. PMID 31422883 DOI: 10.1016/J.Cub.2019.07.019 |
0.792 |
|
| 2019 |
Van Steenkiste NWL, Stephenson I, Herranz M, Husnik F, Keeling PJ, Leander BS. A new case of kleptoplasty in animals: Marine flatworms steal functional plastids from diatoms. Science Advances. 5: eaaw4337. PMID 31328166 DOI: 10.1126/Sciadv.Aaw4337 |
0.782 |
|
| 2019 |
Gawryluk RMR, Tikhonenkov DV, Hehenberger E, Husnik F, Mylnikov AP, Keeling PJ. Non-photosynthetic predators are sister to red algae. Nature. PMID 31316212 DOI: 10.1038/S41586-019-1398-6 |
0.788 |
|
| 2019 |
Boscaro V, Husnik F, Vannini C, Keeling PJ. Symbionts of the ciliate Euplotes: diversity, patterns and potential as models for bacteria-eukaryote endosymbioses. Proceedings. Biological Sciences. 286: 20190693. PMID 31311477 DOI: 10.1098/Rspb.2019.0693 |
0.743 |
|
| 2019 |
Del Campo J, Pons MJ, Herranz M, Wakeman KC, Del Valle J, Vermeij MJA, Leander BS, Keeling PJ. Validation of a universal set of primers to study animal-associated microeukaryotic communities. Environmental Microbiology. PMID 31278828 DOI: 10.1111/1462-2920.14733 |
0.645 |
|
| 2019 |
Deeg CM, Zimmer MM, George EE, Husnik F, Keeling PJ, Suttle CA. Chromulinavorax destructans, a pathogen of microzooplankton that provides a window into the enigmatic candidate phylum Dependentiae. Plos Pathogens. 15: e1007801. PMID 31150530 DOI: 10.1371/Journal.Ppat.1007801 |
0.792 |
|
| 2019 |
John U, Lu Y, Wohlrab S, Groth M, Janouškovec J, Kohli GS, Mark FC, Bickmeyer U, Farhat S, Felder M, Frickenhaus S, Guillou L, Keeling PJ, Moustafa A, Porcel BM, et al. An aerobic eukaryotic parasite with functional mitochondria that likely lacks a mitochondrial genome. Science Advances. 5: eaav1110. PMID 31032404 DOI: 10.1126/Sciadv.Aav1110 |
0.77 |
|
| 2019 |
Starko S, Soto Gomez M, Darby H, Demes KW, Kawai H, Yotsukura N, Lindstrom SC, Keeling PJ, Graham SW, Martone PT. A comprehensive kelp phylogeny sheds light on the evolution of an ecosystem. Molecular Phylogenetics and Evolution. 136: 138-150. PMID 30980936 DOI: 10.1016/J.Ympev.2019.04.012 |
0.356 |
|
| 2019 |
Kwong WK, Del Campo J, Mathur V, Vermeij MJA, Keeling PJ. A widespread coral-infecting apicomplexan with chlorophyll biosynthesis genes. Nature. 568: 103-107. PMID 30944491 DOI: 10.1038/S41586-019-1072-Z |
0.482 |
|
| 2019 |
Irwin NAT, Keeling PJ. Extensive reduction of the nuclear pore complex in nucleomorphs. Genome Biology and Evolution. PMID 30715330 DOI: 10.1093/Gbe/Evz029 |
0.439 |
|
| 2019 |
Gavelis GS, Herranz M, Wakeman KC, Ripken C, Mitarai S, Gile GH, Keeling PJ, Leander BS. Dinoflagellate nucleus contains an extensive endomembrane network, the nuclear net. Scientific Reports. 9: 839. PMID 30696854 DOI: 10.1038/S41598-018-37065-W |
0.774 |
|
| 2019 |
Campo Jd, Bass D, Keeling PJ. The eukaryome: Diversity and role of microeukaryotic organisms associated with animal hosts Functional Ecology. DOI: 10.1111/1365-2435.13490 |
0.308 |
|
| 2018 |
Votýpka J, Kment P, Kriegová E, Vermeij MJA, Keeling PJ, Yurchenko V, Lukeš J. High Prevalence and Endemism of Trypanosomatids on a Small Caribbean Island. The Journal of Eukaryotic Microbiology. PMID 30480347 DOI: 10.1111/Jeu.12704 |
0.39 |
|
| 2018 |
Strassert JFH, Hehenberger E, Del Campo J, Okamoto N, Kolisko M, Richards TA, Worden AZ, Santoro AE, Keeling PJ. Phylogeny, Evidence for a Cryptic Plastid, and Distribution of Chytriodinium Parasites (Dinophyceae) Infecting Copepods. The Journal of Eukaryotic Microbiology. PMID 30444565 DOI: 10.1111/Jeu.12701 |
0.83 |
|
| 2018 |
Sakamoto H, Hirakawa Y, Ishida KI, Keeling PJ, Kita K, Matsuzaki M. Puromycin selection for stable transfectants of the oyster-infecting parasite Perkinsus marinus. Parasitology International. PMID 30389616 DOI: 10.1016/J.Parint.2018.10.011 |
0.666 |
|
| 2018 |
Irwin NAT, Tikhonenkov DV, Hehenberger E, Mylnikov AP, Burki F, Keeling PJ. Phylogenomics supports the monophyly of the Cercozoa. Molecular Phylogenetics and Evolution. PMID 30318266 DOI: 10.1016/J.Ympev.2018.09.004 |
0.455 |
|
| 2018 |
Del Campo J, Kolisko M, Boscaro V, Santoferrara LF, Nenarokov S, Massana R, Guillou L, Simpson A, Berney C, de Vargas C, Brown MW, Keeling PJ, Wegener Parfrey L. EukRef: Phylogenetic curation of ribosomal RNA to enhance understanding of eukaryotic diversity and distribution. Plos Biology. 16: e2005849. PMID 30222734 DOI: 10.1371/Journal.Pbio.2005849 |
0.821 |
|
| 2018 |
Vacek V, Novák LVF, Treitli SC, Táborský P, Cepicka I, Kolísko M, Keeling PJ, Hampl V. Fe-S Cluster Assembly in Oxymonads and Related Protists. Molecular Biology and Evolution. PMID 30184127 DOI: 10.1093/Molbev/Msy168 |
0.694 |
|
| 2018 |
Okamoto N, Gawryluk RMR, Del Campo J, Strassert JFH, Lukeš J, Richards TA, Worden AZ, Santoro AE, Keeling PJ. A Revised Taxonomy of Diplonemids Including the Eupelagonemidae n. fam. and a Type Species, Eupelagonema oceanica n. gen. & sp. The Journal of Eukaryotic Microbiology. PMID 30080299 DOI: 10.1111/Jeu.12679 |
0.771 |
|
| 2018 |
Boscaro V, Syberg-Olsen MJ, Irwin NAT, Del Campo J, Keeling PJ. What Can Environmental Sequences Tell Us About the Distribution of Low-Rank Taxa? The Case of Euplotes (Ciliophora, Spirotrichea), Including a Description of Euplotes enigma sp. nov. The Journal of Eukaryotic Microbiology. PMID 30028565 DOI: 10.1111/Jeu.12669 |
0.423 |
|
| 2018 |
Boscaro V, Santoferrara LF, Zhang Q, Gentekaki E, Syberg-Olsen MJ, Del Campo J, Keeling PJ. EukRef-Ciliophora: A manually curated, phylogeny-based database of small subunit rRNA gene sequences of ciliates. Environmental Microbiology. PMID 29727060 DOI: 10.1111/1462-2920.14264 |
0.407 |
|
| 2018 |
Mathur V, Del Campo J, Kolisko M, Keeling PJ. Global Diversity and Distribution of Close Relatives of Apicomplexan Parasites. Environmental Microbiology. PMID 29687563 DOI: 10.1111/1462-2920.14134 |
0.712 |
|
| 2018 |
Irwin NAT, Martin BJE, Young BP, Browne MJG, Flaus A, Loewen CJR, Keeling PJ, Howe LJ. Viral proteins as a potential driver of histone depletion in dinoflagellates. Nature Communications. 9: 1535. PMID 29670105 DOI: 10.1038/S41467-018-03993-4 |
0.308 |
|
| 2018 |
Bass D, Tikhonenkov DV, Foster R, Dyal P, Janouskovec J, Keeling PJ, Gardner M, Neuhauser S, Hartikainen H, Mylnikov AP, Berney C. Rhizarian 'Novel Clade 10' Revealed as Abundant and Diverse Planktonic and Terrestrial Flagellates, including Aquavolon n. gen. The Journal of Eukaryotic Microbiology. PMID 29658156 DOI: 10.1111/Jeu.12524 |
0.731 |
|
| 2018 |
Záhonová K, Petrželková R, Valach M, Yazaki E, Tikhonenkov DV, Butenko A, Janouškovec J, Hrdá Š, Klimeš V, Burger G, Inagaki Y, Keeling PJ, Hampl V, Flegontov P, Yurchenko V, et al. Extensive molecular tinkering in the evolution of the membrane attachment mode of the Rheb GTPase. Scientific Reports. 8: 5239. PMID 29588502 DOI: 10.1038/S41598-018-23575-0 |
0.698 |
|
| 2018 |
Boscaro V, Kolisko M, Felletti M, Vannini C, Lynn DH, Keeling PJ. Publisher Correction: Parallel genome reduction in symbionts descended from closely related free-living bacteria. Nature Ecology & Evolution. PMID 29487366 DOI: 10.1038/S41559-018-0484-8 |
0.682 |
|
| 2018 |
Heger TJ, Giesbrecht IJW, Gustavsen J, Del Campo J, Kellogg CTE, Hoffman KM, Lertzman K, Mohn WW, Keeling PJ. High-throughput environmental sequencing reveals high diversity of litter and moss associated protist communities along a gradient of drainage and tree productivity. Environmental Microbiology. PMID 29417706 DOI: 10.1111/1462-2920.14061 |
0.322 |
|
| 2018 |
Kaur B, Valach M, Peña-Diaz P, Moreira S, Keeling PJ, Burger G, Lukeš J, Faktorová D. Transformation of Diplonema papillatum, the type species of the highly diverse and abundant marine micro-eukaryotes Diplonemida (Euglenozoa). Environmental Microbiology. PMID 29318727 DOI: 10.1111/1462-2920.14041 |
0.383 |
|
| 2017 |
Boscaro V, Fokin SI, Petroni G, Verni F, Keeling PJ, Vannini C. Symbiont replacement between bacteria of different classes reveals additional layers of complexity in the evolution of symbiosis in the ciliate Euplotes. Protist. 169: 43-52. PMID 29414319 DOI: 10.1016/J.Protis.2017.12.003 |
0.386 |
|
| 2017 |
Orsi WD, Wilken S, Del Campo J, Heger T, James E, Richards TA, Keeling PJ, Worden AZ, Santoro AE. Identifying protist consumers of photosynthetic picoeukaryotes in the surface ocean using stable isotope probing. Environmental Microbiology. PMID 29215213 DOI: 10.1111/1462-2920.14018 |
0.393 |
|
| 2017 |
Del Campo J, James ER, Hirakawa Y, Fiorito R, Kolisko M, Irwin NAT, Mathur V, Boscaro V, Hehenberger E, Karnkowska A, Scheffrahn RH, Keeling PJ. Pseudotrichonympha leei, Pseudotrichonympha lifesoni, and Pseudotrichonympha pearti, new species of parabasalian flagellates and the description of a rotating subcellular structure. Scientific Reports. 7: 16349. PMID 29180788 DOI: 10.1038/S41598-017-16259-8 |
0.697 |
|
| 2017 |
Janouškovec J, Tikhonenkov DV, Burki F, Howe AT, Rohwer FL, Mylnikov AP, Keeling PJ. A New Lineage of Eukaryotes Illuminates Early Mitochondrial Genome Reduction. Current Biology : Cb. 27: 3717-3724.e5. PMID 29174886 DOI: 10.1016/J.Cub.2017.10.051 |
0.762 |
|
| 2017 |
Lemay MA, Martone PT, Keeling P, Burt JM, Krumhansl KA, Sanders RD, Wegener Parfrey L. Sympatric kelp species share a large portion of their surface bacterial communities. Environmental Microbiology. PMID 29124859 DOI: 10.1111/1462-2920.13993 |
0.345 |
|
| 2017 |
Boscaro V, Kolisko M, Felletti M, Vannini C, Lynn DH, Keeling PJ. Parallel genome reduction in symbionts descended from closely related free-living bacteria. Nature Ecology & Evolution. 1: 1160-1167. PMID 29046583 DOI: 10.1038/S41559-017-0237-0 |
0.737 |
|
| 2017 |
Strassert JFH, Karnkowska A, Hehenberger E, Del Campo J, Kolisko M, Okamoto N, Burki F, Janouškovec J, Poirier C, Leonard G, Hallam SJ, Richards TA, Worden AZ, Santoro AE, Keeling PJ. Single cell genomics of uncultured marine alveolates shows paraphyly of basal dinoflagellates. The Isme Journal. PMID 28994824 DOI: 10.1038/Ismej.2017.167 |
0.85 |
|
| 2017 |
Boscaro V, James ER, Fiorito R, Hehenberger E, Karnkowska A, Del Campo J, Kolisko M, Irwin NAT, Mathur V, Scheffrahn RH, Keeling PJ. Molecular characterization and phylogeny of four new species of the genus Trichonympha (Parabasalia, Trichonymphea) from lower termite hindguts. International Journal of Systematic and Evolutionary Microbiology. PMID 28840814 DOI: 10.1099/Ijsem.0.002169 |
0.703 |
|
| 2017 |
Gile GH, James ER, Tai V, Harper JT, Merrell TL, Boscaro V, Husník F, Scheffrahn RH, Keeling PJ. New Species of Spirotrichonympha from Reticulitermes and the Relationships Among Genera in Spirotrichonymphea (Parabasalia). The Journal of Eukaryotic Microbiology. PMID 28710832 DOI: 10.1111/Jeu.12447 |
0.8 |
|
| 2017 |
Hehenberger E, Tikhonenkov DV, Kolisko M, Del Campo J, Esaulov AS, Mylnikov AP, Keeling PJ. Novel Predators Reshape Holozoan Phylogeny and Reveal the Presence of a Two-Component Signaling System in the Ancestor of Animals. Current Biology : Cb. PMID 28648822 DOI: 10.1016/J.Cub.2017.06.006 |
0.694 |
|
| 2017 |
Keeling PJ, McCutcheon JP. Endosymbiosis: the feeling is not mutual. Journal of Theoretical Biology. PMID 28624393 DOI: 10.1016/J.Jtbi.2017.06.008 |
0.632 |
|
| 2017 |
Keeling PJ, Campo JD. Marine Protists Are Not Just Big Bacteria. Current Biology : Cb. 27: R541-R549. PMID 28586691 DOI: 10.1016/J.Cub.2017.03.075 |
0.797 |
|
| 2017 |
Gavelis GS, Keeling PJ, Leander BS. How exaptations facilitated photosensory evolution: Seeing the light by accident. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. PMID 28570771 DOI: 10.1002/Bies.201600266 |
0.634 |
|
| 2017 |
Hehenberger E, James ER, Del Campo J, Buckland-Nicks JA, Reimchen TE, Keeling PJ. Fish Parasite Dinoflagellates Haidadinium ichthyophilum and Piscinoodinium Share a Recent Common Ancestor. The Journal of Eukaryotic Microbiology. PMID 28544317 DOI: 10.1111/Jeu.12430 |
0.318 |
|
| 2017 |
Freeman MA, Fuss J, Kristmundsson Á, Bjorbækmo MFM, Mangot JF, Del Campo J, Keeling PJ, Shalchian-Tabrizi K, Bass D. X-Cells Are Globally Distributed, Genetically Divergent Fish Parasites Related to Perkinsids and Dinoflagellates. Current Biology : Cb. PMID 28528902 DOI: 10.1016/J.Cub.2017.04.045 |
0.351 |
|
| 2017 |
Gavelis GS, Wakeman KC, Tillmann U, Ripken C, Mitarai S, Herranz M, Özbek S, Holstein T, Keeling PJ, Leander BS. Microbial arms race: Ballistic "nematocysts" in dinoflagellates represent a new extreme in organelle complexity. Science Advances. 3: e1602552. PMID 28435864 DOI: 10.1126/Sciadv.1602552 |
0.587 |
|
| 2017 |
Pyle JD, Keeling PJ, Nibert ML. Amalga-like virus infecting Antonospora locustae, a microsporidian pathogen of grasshoppers, plus related viruses associated with other arthropods. Virus Research. PMID 28267607 DOI: 10.1016/J.Virusres.2017.02.015 |
0.419 |
|
| 2016 |
Gawryluk RM, Del Campo J, Okamoto N, Strassert JF, Lukeš J, Richards TA, Worden AZ, Santoro AE, Keeling PJ. Morphological Identification and Single-Cell Genomics of Marine Diplonemids. Current Biology : Cb. 26: 3053-3059. PMID 27875688 DOI: 10.1016/J.Cub.2016.09.013 |
0.85 |
|
| 2016 |
Syberg-Olsen MJ, Irwin NA, Vannini C, Erra F, Di Giuseppe G, Boscaro V, Keeling PJ. Biogeography and Character Evolution of the Ciliate Genus Euplotes (Spirotrichea, Euplotia), with Description of Euplotes curdsi sp. nov. Plos One. 11: e0165442. PMID 27828996 DOI: 10.1371/Journal.Pone.0165442 |
0.43 |
|
| 2016 |
Novák L, Zubáčová Z, Karnkowska A, Kolisko M, Hroudová M, Stairs CW, Simpson AG, Keeling PJ, Roger AJ, Čepička I, Hampl V. Arginine deiminase pathway enzymes: evolutionary history in metamonads and other eukaryotes. Bmc Evolutionary Biology. 16: 197. PMID 27716026 DOI: 10.1186/S12862-016-0771-4 |
0.79 |
|
| 2016 |
Keeling PJ. Genomics: Evolution of the Genetic Code. Current Biology : Cb. 26: R851-3. PMID 27676305 DOI: 10.1016/J.Cub.2016.08.005 |
0.307 |
|
| 2016 |
Del Campo J, Pombert JF, Šlapeta J, Larkum A, Keeling PJ. The 'other' coral symbiont: Ostreobium diversity and distribution. The Isme Journal. PMID 27420029 DOI: 10.1038/Ismej.2016.101 |
0.445 |
|
| 2016 |
Stentiford GD, Becnel JJ, Weiss LM, Keeling PJ, Didier ES, Williams BA, Bjornson S, Kent ML, Freeman MA, Brown MJ, Troemel ER, Roesel K, Sokolova Y, Snowden KF, Solter LF. Microsporidia-Emergent Pathogens in the Global Food Chain (Trends in Parasitology 32, 336-348; April 2, 2016). Trends in Parasitology. PMID 27365191 DOI: 10.1016/J.Pt.2016.06.002 |
0.669 |
|
| 2016 |
Smith DR, Keeling PJ. Protists and the Wild, Wild West of Gene Expression: New Frontiers, Lawlessness, and Misfits. Annual Review of Microbiology. PMID 27359218 DOI: 10.1146/Annurev-Micro-102215-095448 |
0.47 |
|
| 2016 |
Pan J, Del Campo J, Keeling PJ. Reference Tree and Environmental Sequence Diversity of Labyrinthulomycetes. The Journal of Eukaryotic Microbiology. PMID 27329779 DOI: 10.1111/Jeu.12342 |
0.415 |
|
| 2016 |
Hehenberger E, Burki F, Kolisko M, Keeling PJ. Functional relationship between a dinoflagellate host and its diatom endosymbiont. Molecular Biology and Evolution. PMID 27297471 DOI: 10.1093/Molbev/Msw109 |
0.693 |
|
| 2016 |
Tai V, Carpenter KJ, Weber PK, Nalepa CA, Perlman SJ, Keeling PJ. Genome evolution and nitrogen-fixation in bacterial ectosymbionts of a protist inhabiting wood-feeding cockroaches. Applied and Environmental Microbiology. PMID 27235430 DOI: 10.1128/Aem.00611-16 |
0.798 |
|
| 2016 |
Orsi WD, Smith JM, Liu S, Liu Z, Sakamoto CM, Wilken S, Poirier C, Richards TA, Keeling PJ, Worden AZ, Santoro AE. Diverse, uncultivated bacteria and archaea underlying the cycling of dissolved protein in the ocean. The Isme Journal. PMID 26953597 DOI: 10.1038/Ismej.2016.20 |
0.384 |
|
| 2016 |
Janouskovec J, Keeling PJ. Evolution: Causality and the Origin of Parasitism. Current Biology : Cb. 26: R174-7. PMID 26906491 DOI: 10.1016/J.Cub.2015.12.057 |
0.691 |
|
| 2016 |
Strassert JF, Tikhonenkov DV, Pombert JF, Kolisko M, Tai V, Mylnikov AP, Keeling PJ. Moramonas marocensis gen. nov., sp. nov.: a jakobid flagellate isolated from desert soil with a bacteria-like, but bloated mitochondrial genome. Open Biology. 6. PMID 26887409 DOI: 10.1098/Rsob.150239 |
0.827 |
|
| 2016 |
Burki F, Kaplan M, Tikhonenkov DV, Zlatogursky V, Minh BQ, Radaykina LV, Smirnov A, Mylnikov AP, Keeling PJ. Untangling the early diversification of eukaryotes: a phylogenomic study of the evolutionary origins of Centrohelida, Haptophyta and Cryptista. Proceedings. Biological Sciences / the Royal Society. 283. PMID 26817772 DOI: 10.1098/Rspb.2015.2802 |
0.469 |
|
| 2016 |
Stentiford GD, Becnel JJ, Weiss LM, Keeling PJ, Didier ES, Williams BA, Bjornson S, Kent ML, Freeman MA, Brown MJ, Troemel ER, Roesel K, Sokolova Y, Snowden KF, Solter L. Microsporidia - Emergent Pathogens in the Global Food Chain. Trends in Parasitology. PMID 26796229 DOI: 10.1016/J.Pt.2015.12.004 |
0.686 |
|
| 2015 |
Tikhonenkov DV, Janouškovec J, Keeling PJ, Mylnikov AP. The Morphology, Ultrastructure and SSU rRNA Gene Sequence of a New Freshwater Flagellate, Neobodo borokensis n. sp. (Kinetoplastea, Excavata). The Journal of Eukaryotic Microbiology. PMID 26399688 DOI: 10.1111/Jeu.12271 |
0.719 |
|
| 2015 |
Keeling PJ, McCutcheon JP, Doolittle WF. Symbiosis becoming permanent: Survival of the luckiest. Proceedings of the National Academy of Sciences of the United States of America. 112: 10101-3. PMID 26283342 DOI: 10.1073/Pnas.1513346112 |
0.73 |
|
| 2015 |
Gavelis GS, White RA, Suttle CA, Keeling PJ, Leander BS. Single-cell transcriptomics using spliced leader PCR: Evidence for multiple losses of photosynthesis in polykrikoid dinoflagellates. Bmc Genomics. 16: 528. PMID 26183220 DOI: 10.1186/S12864-015-1636-8 |
0.715 |
|
| 2015 |
Woo YH, Ansari H, Otto TD, Klinger CM, Kolisko M, Michálek J, Saxena A, Shanmugam D, Tayyrov A, Veluchamy A, Ali S, Bernal A, del Campo J, Cihlář J, Flegontov P, ... ... Keeling PJ, et al. Chromerid genomes reveal the evolutionary path from photosynthetic algae to obligate intracellular parasites. Elife. 4: e06974. PMID 26175406 DOI: 10.7554/Elife.06974 |
0.823 |
|
| 2015 |
Gavelis GS, Hayakawa S, White RA, Gojobori T, Suttle CA, Keeling PJ, Leander BS. Eye-like ocelloids are built from different endosymbiotically acquired components. Nature. 523: 204-7. PMID 26131935 DOI: 10.1038/Nature14593 |
0.704 |
|
| 2015 |
Smith DR, Keeling PJ. Mitochondrial and plastid genome architecture: Reoccurring themes, but significant differences at the extremes. Proceedings of the National Academy of Sciences of the United States of America. PMID 25814499 DOI: 10.1073/Pnas.1422049112 |
0.493 |
|
| 2015 |
Janouškovec J, Tikhonenkov DV, Burki F, Howe AT, Kolísko M, Mylnikov AP, Keeling PJ. Factors mediating plastid dependency and the origins of parasitism in apicomplexans and their close relatives. Proceedings of the National Academy of Sciences of the United States of America. 112: 10200-7. PMID 25717057 DOI: 10.1073/Pnas.1423790112 |
0.844 |
|
| 2015 |
Worden AZ, Follows MJ, Giovannoni SJ, Wilken S, Zimmerman AE, Keeling PJ. Environmental science. Rethinking the marine carbon cycle: factoring in the multifarious lifestyles of microbes. Science (New York, N.Y.). 347: 1257594. PMID 25678667 DOI: 10.1126/Science.1257594 |
0.357 |
|
| 2015 |
Flegontov P, Michálek J, Janouškovec J, Lai DH, Jirk? M, Hajdušková E, Tom?ala A, Otto TD, Keeling PJ, Pain A, Oborník M, Lukeš J. Divergent mitochondrial respiratory chains in phototrophic relatives of apicomplexan parasites. Molecular Biology and Evolution. 32: 1115-31. PMID 25660376 DOI: 10.1093/Molbev/Msv021 |
0.713 |
|
| 2015 |
Gile GH, James ER, Okamoto N, Carpenter KJ, Scheffrahn RH, Keeling PJ. Molecular Evidence for the Polyphyly of Macrotrichomonas (Parabasalia: Cristamonadea) and a Proposal for Macrotrichomonoides n. gen. The Journal of Eukaryotic Microbiology. PMID 25600410 DOI: 10.1111/Jeu.12204 |
0.787 |
|
| 2015 |
Pombert JF, Haag KL, Beidas S, Ebert D, Keeling PJ. The Ordospora colligata genome: Evolution of extreme reduction in microsporidia and host-to-parasite horizontal gene transfer. Mbio. 6. PMID 25587016 DOI: 10.1128/Mbio.02400-14 |
0.461 |
|
| 2015 |
Tai V, James ER, Nalepa CA, Scheffrahn RH, Perlman SJ, Keeling PJ. The role of host phylogeny varies in shaping microbial diversity in the hindguts of lower termites. Applied and Environmental Microbiology. 81: 1059-70. PMID 25452280 DOI: 10.1128/Aem.02945-14 |
0.762 |
|
| 2015 |
Tai V, Gile GH, Pan J, James ER, Carpenter KJ, Scheffrahn RH, Keeling PJ. The phylogenetic position of Kofoidia loriculata (Parabasalia) and its implications for the evolution of the Cristamonadea. The Journal of Eukaryotic Microbiology. 62: 255-9. PMID 25155455 DOI: 10.1111/Jeu.12163 |
0.819 |
|
| 2015 |
Keeling PJ, Rayner JC. The origins of malaria: there are more things in heaven and earth …. Parasitology. 142: S16-25. PMID 24963725 DOI: 10.1017/S0031182014000766 |
0.339 |
|
| 2015 |
Woo YH, Ansari H, Otto TD, Klinger CM, Kolisko M, Michálek J, Saxena A, Shanmugam D, Tayyrov A, Veluchamy A, Ali S, Bernal A, Campo Jd, Cihlář J, Flegontov P, ... ... Keeling PJ, et al. Author response: Chromerid genomes reveal the evolutionary path from photosynthetic algae to obligate intracellular parasites Elife. DOI: 10.7554/Elife.06974.033 |
0.818 |
|
| 2015 |
Gavelis GS, White RA, Suttle CA, Keeling PJ, Leander BS. Single-cell transcriptomics using spliced leader PCR: Evidence for multiple losses of photosynthesis in polykrikoid dinoflagellates Bmc Genomics. 16. DOI: 10.1186/s12864-015-1636-8 |
0.644 |
|
| 2015 |
Gavelis GS, Hayakawa S, White RA, Gojobori T, Suttle CA, Keeling PJ, Leander BS. Eye-like ocelloids are built from different endosymbiotically acquired components Nature. 523: 204-207. DOI: 10.1038/nature14593 |
0.609 |
|
| 2014 |
Kolisko M, Boscaro V, Burki F, Lynn DH, Keeling PJ. Single-cell transcriptomics for microbial eukaryotes. Current Biology : Cb. 24: R1081-2. PMID 25458215 DOI: 10.1016/J.Cub.2014.10.026 |
0.723 |
|
| 2014 |
Mikhailov KV, Janouškovec J, Tikhonenkov DV, Mirzaeva GS, Diakin AY, Simdyanov TG, Mylnikov AP, Keeling PJ, Aleoshin VV. A complex distribution of elongation family GTPases EF1A and EFL in basal alveolate lineages. Genome Biology and Evolution. 6: 2361-7. PMID 25179686 DOI: 10.1093/Gbe/Evu186 |
0.732 |
|
| 2014 |
Hehenberger E, Imanian B, Burki F, Keeling PJ. Evidence for the retention of two evolutionary distinct plastids in dinoflagellates with diatom endosymbionts. Genome Biology and Evolution. 6: 2321-34. PMID 25172904 DOI: 10.1093/Gbe/Evu182 |
0.809 |
|
| 2014 |
McCutcheon JP, Keeling PJ. Endosymbiosis: protein targeting further erodes the organelle/symbiont distinction. Current Biology : Cb. 24: R654-5. PMID 25050964 DOI: 10.1016/J.Cub.2014.05.073 |
0.589 |
|
| 2014 |
Keeling PJ, Burki F, Wilcox HM, Allam B, Allen EE, Amaral-Zettler LA, Armbrust EV, Archibald JM, Bharti AK, Bell CJ, Beszteri B, Bidle KD, Cameron CT, Campbell L, Caron DA, et al. The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing. Plos Biology. 12: e1001889. PMID 24959919 DOI: 10.1371/Journal.Pbio.1001889 |
0.822 |
|
| 2014 |
Pombert JF, Blouin NA, Lane C, Boucias D, Keeling PJ. A lack of parasitic reduction in the obligate parasitic green alga Helicosporidium. Plos Genetics. 10: e1004355. PMID 24809511 DOI: 10.1371/Journal.Pgen.1004355 |
0.451 |
|
| 2014 |
Tikhonenkov DV, Janouškovec J, Mylnikov AP, Mikhailov KV, Simdyanov TG, Aleoshin VV, Keeling PJ. Description of Colponema vietnamica sp.n. and Acavomonas peruviana n. gen. n. sp., two new alveolate phyla (Colponemidia nom. nov. and Acavomonidia nom. nov.) and their contributions to reconstructing the ancestral state of alveolates and eukaryotes. Plos One. 9: e95467. PMID 24740116 DOI: 10.1371/Journal.Pone.0095467 |
0.719 |
|
| 2014 |
Del Campo J, Sieracki ME, Molestina R, Keeling P, Massana R, Ruiz-Trillo I. The others: Our biased perspective of eukaryotic genomes Trends in Ecology and Evolution. 29: 252-259. PMID 24726347 DOI: 10.1016/J.Tree.2014.03.006 |
0.767 |
|
| 2014 |
Hirakawa Y, Suzuki S, Archibald JM, Keeling PJ, Ishida K. Overexpression of molecular chaperone genes in nucleomorph genomes. Molecular Biology and Evolution. 31: 1437-43. PMID 24603278 DOI: 10.1093/Molbev/Msu092 |
0.817 |
|
| 2014 |
Lee R, Lai H, Malik SB, Saldarriaga JF, Keeling PJ, Slamovits CH. Analysis of EST data of the marine protist Oxyrrhis marina, an emerging model for alveolate biology and evolution. Bmc Genomics. 15: 122. PMID 24512041 DOI: 10.1186/1471-2164-15-122 |
0.815 |
|
| 2014 |
Keeling PJ. The impact of history on our perception of evolutionary events: endosymbiosis and the origin of eukaryotic complexity. Cold Spring Harbor Perspectives in Biology. 6. PMID 24492708 DOI: 10.1101/Cshperspect.A016196 |
0.424 |
|
| 2014 |
Imanian B, Keeling PJ. Horizontal gene transfer and redundancy of tryptophan biosynthetic enzymes in dinotoms. Genome Biology and Evolution. 6: 333-43. PMID 24448981 DOI: 10.1093/Gbe/Evu014 |
0.817 |
|
| 2014 |
Okamoto N, Keeling PJ. The 3D structure of the apical complex and association with the flagellar apparatus revealed by serial TEM tomography in Psammosa pacifica, a distant relative of the Apicomplexa. Plos One. 9: e84653. PMID 24392150 DOI: 10.1371/Journal.Pone.0084653 |
0.307 |
|
| 2014 |
Burki F, Imanian B, Hehenberger E, Hirakawa Y, Maruyama S, Keeling PJ. Endosymbiotic gene transfer in tertiary plastid-containing dinoflagellates. Eukaryotic Cell. 13: 246-55. PMID 24297445 DOI: 10.1128/Ec.00299-13 |
0.816 |
|
| 2013 |
Janouškovec J, Tikhonenkov DV, Mikhailov KV, Simdyanov TG, Aleoshin VV, Mylnikov AP, Keeling PJ. Colponemids represent multiple ancient alveolate lineages. Current Biology : Cb. 23: 2546-52. PMID 24316202 DOI: 10.1016/J.Cub.2013.10.062 |
0.754 |
|
| 2013 |
Carpenter KJ, Weber PK, Davisson ML, Pett-Ridge J, Haverty MI, Keeling PJ. Correlated SEM, FIB-SEM, TEM, and NanoSIMS imaging of microbes from the hindgut of a lower termite: methods for in situ functional and ecological studies of uncultivable microbes. Microscopy and Microanalysis : the Official Journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada. 19: 1490-501. PMID 24119340 DOI: 10.1017/S1431927613013482 |
0.321 |
|
| 2013 |
Janouskovec J, Sobotka R, Lai DH, Flegontov P, Koník P, Komenda J, Ali S, Prásil O, Pain A, Oborník M, Lukes J, Keeling PJ. Split photosystem protein, linear-mapping topology, and growth of structural complexity in the plastid genome of Chromera velia. Molecular Biology and Evolution. 30: 2447-62. PMID 23974208 DOI: 10.1093/Molbev/Mst144 |
0.729 |
|
| 2013 |
James ER, Tai V, Scheffrahn RH, Keeling PJ. Trichonympha burlesquei n. sp. from Reticulitermes virginicus and evidence against a cosmopolitan distribution of Trichonympha agilis in many termite hosts. International Journal of Systematic and Evolutionary Microbiology. 63: 3873-6. PMID 23918788 DOI: 10.1099/Ijs.0.054874-0 |
0.644 |
|
| 2013 |
Burki F, Corradi N, Sierra R, Pawlowski J, Meyer GR, Abbott CL, Keeling PJ. Phylogenomics of the intracellular parasite Mikrocytos mackini reveals evidence for a mitosome in rhizaria. Current Biology : Cb. 23: 1541-7. PMID 23891116 DOI: 10.1016/J.Cub.2013.06.033 |
0.43 |
|
| 2013 |
Tai V, Keeling PJ. Termite hindguts and the ecology of microbial communities in the sequencing age. The Journal of Eukaryotic Microbiology. 60: 421-8. PMID 23710655 DOI: 10.1111/Jeu.12048 |
0.638 |
|
| 2013 |
Smith DR, Keeling PJ. Gene conversion shapes linear mitochondrial genome architecture. Genome Biology and Evolution. 5: 905-12. PMID 23572386 DOI: 10.1093/Gbe/Evt059 |
0.468 |
|
| 2013 |
Janouškovec J, Liu SL, Martone PT, Carré W, Leblanc C, Collén J, Keeling PJ. Evolution of red algal plastid genomes: ancient architectures, introns, horizontal gene transfer, and taxonomic utility of plastid markers. Plos One. 8: e59001. PMID 23536846 DOI: 10.1371/Journal.Pone.0059001 |
0.785 |
|
| 2013 |
Tai V, James ER, Perlman SJ, Keeling PJ. Single-Cell DNA barcoding using sequences from the small subunit rRNA and internal transcribed spacer region identifies new species of Trichonympha and Trichomitopsis from the hindgut of the termite Zootermopsis angusticollis. Plos One. 8: e58728. PMID 23536818 DOI: 10.1371/Journal.Pone.0058728 |
0.78 |
|
| 2013 |
James ER, Okamoto N, Burki F, Scheffrahn RH, Keeling PJ. Cthulhu Macrofasciculumque n. g., n. sp. and Cthylla Microfasciculumque n. g., n. sp., a newly identified lineage of parabasalian termite symbionts. Plos One. 8: e58509. PMID 23526991 DOI: 10.1371/Journal.Pone.0058509 |
0.392 |
|
| 2013 |
Pan G, Xu J, Li T, Xia Q, Liu SL, Zhang G, Li S, Li C, Liu H, Yang L, Liu T, Zhang X, Wu Z, Fan W, Dang X, ... ... Keeling PJ, et al. Comparative genomics of parasitic silkworm microsporidia reveal an association between genome expansion and host adaptation. Bmc Genomics. 14: 186. PMID 23496955 DOI: 10.1186/1471-2164-14-186 |
0.482 |
|
| 2013 |
Keeling PJ. The number, speed, and impact of plastid endosymbioses in eukaryotic evolution. Annual Review of Plant Biology. 64: 583-607. PMID 23451781 DOI: 10.1146/Annurev-Arplant-050312-120144 |
0.47 |
|
| 2013 |
Gile GH, Carpenter KJ, James ER, Scheffrahn RH, Keeling PJ. Morphology and molecular phylogeny of Staurojoenina mulleri sp. nov. (Trichonymphida, Parabasalia) from the hindgut of the kalotermitid Neotermes jouteli. The Journal of Eukaryotic Microbiology. 60: 203-13. PMID 23398273 DOI: 10.1111/Jeu.12024 |
0.814 |
|
| 2013 |
James ER, Burki F, Todd Harper J, Scheffrahn RH, Keeling PJ. Molecular characterization of parabasalian symbionts Coronympha clevelandii and Trichonympha subquasilla from the Hawaiian lowland tree termite Incisitermes immigrans. The Journal of Eukaryotic Microbiology. 60: 313-6. PMID 23384430 DOI: 10.1111/Jeu.12027 |
0.371 |
|
| 2013 |
Smith DR, Hamaji T, Olson BJ, Durand PM, Ferris P, Michod RE, Featherston J, Nozaki H, Keeling PJ. Organelle genome complexity scales positively with organism size in volvocine green algae. Molecular Biology and Evolution. 30: 793-7. PMID 23300255 DOI: 10.1093/Molbev/Mst002 |
0.486 |
|
| 2013 |
Pombert JF, Xu J, Smith DR, Heiman D, Young S, Cuomo CA, Weiss LM, Keeling PJ. Complete genome sequences from three genetically distinct strains reveal high intraspecies genetic diversity in the microsporidian Encephalitozoon cuniculi. Eukaryotic Cell. 12: 503-11. PMID 23291622 DOI: 10.1128/Ec.00312-12 |
0.501 |
|
| 2013 |
Janouškovec J, Horák A, Barott KL, Rohwer FL, Keeling PJ. Environmental distribution of coral-associated relatives of apicomplexan parasites. The Isme Journal. 7: 444-7. PMID 23151646 DOI: 10.1038/Ismej.2012.129 |
0.704 |
|
| 2013 |
Pombert J, Smirnov A, James ER, Janouškovec J, Gray MW, Keeling PJ. The complete mitochondrial genome from an unidentified Phalansterium species. Protist Genomics. 1. DOI: 10.2478/prge-2013-0002 |
0.528 |
|
| 2012 |
Pombert JF, James ER, Janouškovec J, Keeling PJ. Evidence for transitional stages in the evolution of euglenid group II introns and twintrons in the Monomorphina aenigmatica plastid genome. Plos One. 7: e53433. PMID 23300929 DOI: 10.1371/Journal.Pone.0053433 |
0.762 |
|
| 2012 |
Curtis BA, Tanifuji G, Burki F, Gruber A, Irimia M, Maruyama S, Arias MC, Ball SG, Gile GH, Hirakawa Y, Hopkins JF, Kuo A, Rensing SA, Schmutz J, Symeonidi A, ... ... Keeling PJ, et al. Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs. Nature. 492: 59-65. PMID 23201678 DOI: 10.1038/Nature11681 |
0.83 |
|
| 2012 |
Pawlowski J, Audic S, Adl S, Bass D, Belbahri L, Berney C, Bowser SS, Cepicka I, Decelle J, Dunthorn M, Fiore-Donno AM, Gile GH, Holzmann M, Jahn R, Jirků M, ... Keeling PJ, et al. CBOL protist working group: barcoding eukaryotic richness beyond the animal, plant, and fungal kingdoms. Plos Biology. 10: e1001419. PMID 23139639 DOI: 10.1371/Journal.Pbio.1001419 |
0.784 |
|
| 2012 |
Hirakawa Y, Burki F, Keeling PJ. Dual targeting of aminoacyl-tRNA synthetases to the mitochondrion and complex plastid in chlorarachniophytes. Journal of Cell Science. 125: 6176-84. PMID 23038770 DOI: 10.1242/Jcs.116533 |
0.365 |
|
| 2012 |
Worden AZ, Janouskovec J, McRose D, Engman A, Welsh RM, Malfatti S, Tringe SG, Keeling PJ. Global distribution of a wild alga revealed by targeted metagenomics. Current Biology : Cb. 22: R675-7. PMID 22974991 DOI: 10.1016/J.Cub.2012.07.054 |
0.748 |
|
| 2012 |
Imanian B, Pombert JF, Dorrell RG, Burki F, Keeling PJ. Tertiary endosymbiosis in two dinotoms has generated little change in the mitochondrial genomes of their dinoflagellate hosts and diatom endosymbionts. Plos One. 7: e43763. PMID 22916303 DOI: 10.1371/Journal.Pone.0043763 |
0.802 |
|
| 2012 |
Stern RF, Andersen RA, Jameson I, Küpper FC, Coffroth MA, Vaulot D, Le Gall F, Véron B, Brand JJ, Skelton H, Kasai F, Lilly EL, Keeling PJ. Evaluating the ribosomal internal transcribed spacer (ITS) as a candidate dinoflagellate barcode marker. Plos One. 7: e42780. PMID 22916158 DOI: 10.1371/Journal.Pone.0042780 |
0.364 |
|
| 2012 |
Pombert JF, Selman M, Burki F, Bardell FT, Farinelli L, Solter LF, Whitman DW, Weiss LM, Corradi N, Keeling PJ. Gain and loss of multiple functionally related, horizontally transferred genes in the reduced genomes of two microsporidian parasites. Proceedings of the National Academy of Sciences of the United States of America. 109: 12638-43. PMID 22802648 DOI: 10.1073/Pnas.1205020109 |
0.49 |
|
| 2012 |
Janouškovec J, Horák A, Barott KL, Rohwer FL, Keeling PJ. Global analysis of plastid diversity reveals apicomplexan-related lineages in coral reefs. Current Biology : Cb. 22: R518-9. PMID 22789997 DOI: 10.1016/J.Cub.2012.04.047 |
0.76 |
|
| 2012 |
Smith DR, Hua J, Lee RW, Keeling PJ. Relative rates of evolution among the three genetic compartments of the red alga Porphyra differ from those of green plants and do not correlate with genome architecture. Molecular Phylogenetics and Evolution. 65: 339-44. PMID 22760027 DOI: 10.1016/J.Ympev.2012.06.017 |
0.617 |
|
| 2012 |
Okamoto N, Horák A, Keeling PJ. Description of two species of early branching dinoflagellates, Psammosa pacifica n. g., n. sp. and P. atlantica n. sp. Plos One. 7: e34900. PMID 22719825 DOI: 10.1371/Journal.Pone.0034900 |
0.359 |
|
| 2012 |
Burki F, Flegontov P, Oborník M, Cihlár J, Pain A, Lukes J, Keeling PJ. Re-evaluating the green versus red signal in eukaryotes with secondary plastid of red algal origin. Genome Biology and Evolution. 4: 626-35. PMID 22593553 DOI: 10.1093/Gbe/Evs049 |
0.492 |
|
| 2012 |
Burki F, Hirakawa Y, Keeling PJ. Intragenomic spread of plastid-targeting presequences in the coccolithophore Emiliania huxleyi. Molecular Biology and Evolution. 29: 2109-12. PMID 22466155 DOI: 10.1093/Molbev/Mss103 |
0.426 |
|
| 2012 |
Zhao S, Burki F, Bråte J, Keeling PJ, Klaveness D, Shalchian-Tabrizi K. Collodictyon--an ancient lineage in the tree of eukaryotes. Molecular Biology and Evolution. 29: 1557-68. PMID 22319147 DOI: 10.1093/Molbev/Mss001 |
0.513 |
|
| 2012 |
Burki F, Okamoto N, Pombert JF, Keeling PJ. The evolutionary history of haptophytes and cryptophytes: phylogenomic evidence for separate origins. Proceedings. Biological Sciences / the Royal Society. 279: 2246-54. PMID 22298847 DOI: 10.1098/Rspb.2011.2301 |
0.5 |
|
| 2012 |
Hirakawa Y, Burki F, Keeling PJ. Genome-based reconstruction of the protein import machinery in the secondary plastid of a chlorarachniophyte alga. Eukaryotic Cell. 11: 324-33. PMID 22267775 DOI: 10.1128/Ec.05264-11 |
0.349 |
|
| 2012 |
Smith DR, Keeling PJ. Twenty-fold difference in evolutionary rates between the mitochondrial and plastid genomes of species with secondary red plastids. The Journal of Eukaryotic Microbiology. 59: 181-4. PMID 22236077 DOI: 10.1111/J.1550-7408.2011.00601.X |
0.5 |
|
| 2012 |
Ghosh K, Nieves E, Keeling P, Cali A, Weiss LM. A new vesicular compartment in Encephalitozoon cuniculi. Microbes and Infection / Institut Pasteur. 14: 324-8. PMID 22166342 DOI: 10.1016/J.Micinf.2011.11.010 |
0.34 |
|
| 2012 |
Smith DR, Kayal E, Yanagihara AA, Collins AG, Pirro S, Keeling PJ. First complete mitochondrial genome sequence from a box jellyfish reveals a highly fragmented linear architecture and insights into telomere evolution. Genome Biology and Evolution. 4: 52-8. PMID 22117085 DOI: 10.1093/Gbe/Evr127 |
0.498 |
|
| 2012 |
Slamovits CH, Okamoto N, Burri L, James ER, Keeling PJ. Erratum: Corrigendum: A bacterial proteorhodopsin proton pump in marine eukaryotes Nature Communications. 3. DOI: 10.1038/Ncomms1863 |
0.795 |
|
| 2011 |
Koreny L, Sobotka R, Janouskovec J, Keeling PJ, Oborník M. Tetrapyrrole synthesis of photosynthetic chromerids is likely homologous to the unusual pathway of apicomplexan parasites. The Plant Cell. 23: 3454-62. PMID 21963666 DOI: 10.1105/Tpc.111.089102 |
0.705 |
|
| 2011 |
Saldarriaga JF, Gile GH, James ER, Horák A, Scheffrahn RH, Keeling PJ. Morphology and molecular phylogeny of Pseudotrichonympha hertwigi and Pseudotrichonympha paulistana (Trichonymphea, parabasalia) from neotropical rhinotermitids. The Journal of Eukaryotic Microbiology. 58: 487-96. PMID 21895839 DOI: 10.1111/J.1550-7408.2011.00575.X |
0.81 |
|
| 2011 |
Fernández Robledo JA, Caler E, Matsuzaki M, Keeling PJ, Shanmugam D, Roos DS, Vasta GR. The search for the missing link: a relic plastid in Perkinsus? International Journal For Parasitology. 41: 1217-29. PMID 21889509 DOI: 10.1016/J.Ijpara.2011.07.008 |
0.432 |
|
| 2011 |
Smith DR, Burki F, Yamada T, Grimwood J, Grigoriev IV, Van Etten JL, Keeling PJ. The GC-rich mitochondrial and plastid genomes of the green alga Coccomyxa give insight into the evolution of organelle DNA nucleotide landscape. Plos One. 6: e23624. PMID 21887287 DOI: 10.1371/Journal.Pone.0023624 |
0.487 |
|
| 2011 |
Hirakawa Y, Howe A, James ER, Keeling PJ. Morphological diversity between culture strains of a chlorarachniophyte, Lotharella globosa. Plos One. 6: e23193. PMID 21858028 DOI: 10.1371/Journal.Pone.0023193 |
0.316 |
|
| 2011 |
Keeling PJ. Endosymbiosis: bacteria sharing the load. Current Biology : Cb. 21: R623-4. PMID 21855000 DOI: 10.1016/J.Cub.2011.06.061 |
0.398 |
|
| 2011 |
Selman M, Pombert JF, Solter L, Farinelli L, Weiss LM, Keeling P, Corradi N. Acquisition of an animal gene by microsporidian intracellular parasites. Current Biology : Cb. 21: R576-7. PMID 21820617 DOI: 10.1016/J.Cub.2011.06.017 |
0.44 |
|
| 2011 |
Botté CY, Yamaryo-Botté Y, Janouskovec J, Rupasinghe T, Keeling PJ, Crellin P, Coppel RL, Maréchal E, McConville MJ, McFadden GI. Identification of plant-like galactolipids in Chromera velia, a photosynthetic relative of malaria parasites. The Journal of Biological Chemistry. 286: 29893-903. PMID 21712377 DOI: 10.1074/Jbc.M111.254979 |
0.705 |
|
| 2011 |
Carpenter KJ, Horak A, Chow L, Keeling PJ. Symbiosis, morphology, and phylogeny of Hoplonymphidae (Parabasalia) of the wood-feeding roach Cryptocercus punctulatus. The Journal of Eukaryotic Microbiology. 58: 426-36. PMID 21699624 DOI: 10.1111/J.1550-7408.2011.00564.X |
0.344 |
|
| 2011 |
Lukeš J, Archibald JM, Keeling PJ, Doolittle WF, Gray MW. How a neutral evolutionary ratchet can build cellular complexity. Iubmb Life. 63: 528-37. PMID 21698757 DOI: 10.1002/Iub.489 |
0.784 |
|
| 2011 |
Doolittle WF, Lukeš J, Archibald JM, Keeling PJ, Gray MW. Comment on "Does constructive neutral evolution play an important role in the origin of cellular complexity?" DOI 10.1002/bies.201100010. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 33: 427-9. PMID 21538416 DOI: 10.1002/Bies.201100039 |
0.795 |
|
| 2011 |
Hirakawa Y, Burki F, Keeling PJ. Nucleus- and nucleomorph-targeted histone proteins in a chlorarachniophyte alga. Molecular Microbiology. 80: 1439-49. PMID 21470316 DOI: 10.1111/J.1365-2958.2011.07643.X |
0.411 |
|
| 2011 |
Slamovits CH, Okamoto N, Burri L, James ER, Keeling PJ. A bacterial proteorhodopsin proton pump in marine eukaryotes. Nature Communications. 2: 183. PMID 21304512 DOI: 10.1038/Ncomms1188 |
0.81 |
|
| 2011 |
Barott KL, Rodriguez-Brito B, Janouškovec J, Marhaver KL, Smith JE, Keeling P, Rohwer FL. Microbial diversity associated with four functional groups of benthic reef algae and the reef-building coral Montastraea annularis. Environmental Microbiology. 13: 1192-204. PMID 21272183 DOI: 10.1111/J.1462-2920.2010.02419.X |
0.347 |
|
| 2011 |
Ghosh K, Nieves E, Keeling P, Pombert JF, Henrich PP, Cali A, Weiss LM. Branching network of proteinaceous filaments within the parasitophorous vacuole of Encephalitozoon cuniculi and Encephalitozoon hellem. Infection and Immunity. 79: 1374-85. PMID 21220485 DOI: 10.1128/Iai.01152-10 |
0.324 |
|
| 2011 |
Keeling PJ, Corradi N. Shrink it or lose it: balancing loss of function with shrinking genomes in the microsporidia. Virulence. 2: 67-70. PMID 21217203 DOI: 10.4161/Viru.2.1.14606 |
0.455 |
|
| 2011 |
Gile GH, James ER, Scheffrahn RH, Carpenter KJ, Harper JT, Keeling PJ. Molecular and morphological analysis of the family Calonymphidae with a description of Calonympha chia sp. nov., Snyderella kirbyi sp. nov., Snyderella swezyae sp. nov. and Snyderella yamini sp. nov. International Journal of Systematic and Evolutionary Microbiology. 61: 2547-58. PMID 21112987 DOI: 10.1099/Ijs.0.028480-0 |
0.81 |
|
| 2011 |
Oborník M, Vancová M, Lai DH, Janouškovec J, Keeling PJ, Lukeš J. Morphology and ultrastructure of multiple life cycle stages of the photosynthetic relative of apicomplexa, Chromera velia. Protist. 162: 115-30. PMID 20643580 DOI: 10.1016/J.Protis.2010.02.004 |
0.701 |
|
| 2011 |
Slamovits CH, Keeling PJ. Contributions of Oxyrrhis marina to molecular biology, genomics and organelle evolution of dinoflagellates Journal of Plankton Research. 33: 591-602. DOI: 10.1093/Plankt/Fbq153 |
0.817 |
|
| 2011 |
Montagnes DJS, Lowe CD, Roberts EC, Breckels MN, Boakes DE, Davidson K, Keeling PJ, Slamovits CH, Steinke M, Yang Z, Watts PC. An introduction to the special issue: Oxyrrhis marina, a model organism? Journal of Plankton Research. 33: 549-554. DOI: 10.1093/Plankt/Fbq121 |
0.768 |
|
| 2011 |
Lowe CD, Keeling PJ, Martin LE, Slamovits CH, Watts PC, Montagnes DJS. Who is Oxyrrhis marina? Morphological and phylogenetic studies on an unusual dinoflagellate Journal of Plankton Research. 33: 555-567. DOI: 10.1093/Plankt/Fbq110 |
0.786 |
|
| 2010 |
Burki F, Kudryavtsev A, Matz MV, Aglyamova GV, Bulman S, Fiers M, Keeling PJ, Pawlowski J. Evolution of Rhizaria: new insights from phylogenomic analysis of uncultivated protists. Bmc Evolutionary Biology. 10: 377. PMID 21126361 DOI: 10.1186/1471-2148-10-377 |
0.479 |
|
| 2010 |
Stern RF, Horak A, Andrew RL, Coffroth MA, Andersen RA, Küpper FC, Jameson I, Hoppenrath M, Véron B, Kasai F, Brand J, James ER, Keeling PJ. Environmental barcoding reveals massive dinoflagellate diversity in marine environments. Plos One. 5: e13991. PMID 21085582 DOI: 10.1371/Journal.Pone.0013991 |
0.657 |
|
| 2010 |
Gray MW, Lukes J, Archibald JM, Keeling PJ, Doolittle WF. Cell biology. Irremediable complexity? Science (New York, N.Y.). 330: 920-1. PMID 21071654 DOI: 10.1126/Science.1198594 |
0.771 |
|
| 2010 |
Cocquyt E, Gile GH, Leliaert F, Verbruggen H, Keeling PJ, De Clerck O. Complex phylogenetic distribution of a non-canonical genetic code in green algae Bmc Evolutionary Biology. 10. PMID 20977766 DOI: 10.1186/1471-2148-10-327 |
0.8 |
|
| 2010 |
Corradi N, Pombert JF, Farinelli L, Didier ES, Keeling PJ. The complete sequence of the smallest known nuclear genome from the microsporidian Encephalitozoon intestinalis. Nature Communications. 1: 77. PMID 20865802 DOI: 10.1038/Ncomms1082 |
0.465 |
|
| 2010 |
Keeling PJ, Corradi N, Morrison HG, Haag KL, Ebert D, Weiss LM, Akiyoshi DE, Tzipori S. The reduced genome of the parasitic microsporidian Enterocytozoon bieneusi lacks genes for core carbon metabolism. Genome Biology and Evolution. 2: 304-9. PMID 20624735 DOI: 10.1093/Gbe/Evq022 |
0.431 |
|
| 2010 |
Janouskovec J, Horák A, Oborník M, Lukes J, Keeling PJ. A common red algal origin of the apicomplexan, dinoflagellate, and heterokont plastids. Proceedings of the National Academy of Sciences of the United States of America. 107: 10949-54. PMID 20534454 DOI: 10.1073/Pnas.1003335107 |
0.783 |
|
| 2010 |
Imanian B, Pombert JF, Keeling PJ. The complete plastid genomes of the two 'dinotoms' Durinskia baltica and Kryptoperidinium foliaceum. Plos One. 5: e10711. PMID 20502706 DOI: 10.1371/Journal.Pone.0010711 |
0.81 |
|
| 2010 |
Lee SC, Corradi N, Doan S, Dietrich FS, Keeling PJ, Heitman J. Evolution of the sex-related locus and genomic features shared in microsporidia and fungi. Plos One. 5: e10539. PMID 20479876 DOI: 10.1371/Journal.Pone.0010539 |
0.492 |
|
| 2010 |
Williams BA, Elliot C, Burri L, Kido Y, Kita K, Moore AL, Keeling PJ. A broad distribution of the alternative oxidase in microsporidian parasites. Plos Pathogens. 6: e1000761. PMID 20169184 DOI: 10.1371/Journal.Ppat.1000761 |
0.838 |
|
| 2010 |
Gill EE, Lee RC, Corradi N, Grisdale CJ, Limpright VO, Keeling PJ, Fast NM. Splicing and transcription differ between spore and intracellular life stages in the parasitic microsporidia. Molecular Biology and Evolution. 27: 1579-84. PMID 20167610 DOI: 10.1093/Molbev/Msq050 |
0.352 |
|
| 2010 |
Hirakawa Y, Gile GH, Ota S, Keeling PJ, Ishida K. Characterization of periplastidal compartment-targeting signals in chlorarachniophytes. Molecular Biology and Evolution. 27: 1538-45. PMID 20133351 DOI: 10.1093/Molbev/Msq038 |
0.805 |
|
| 2010 |
Pombert JF, Keeling PJ. The mitochondrial genome of the entomoparasitic green alga helicosporidium. Plos One. 5: e8954. PMID 20126458 DOI: 10.1371/Journal.Pone.0008954 |
0.464 |
|
| 2010 |
Keeling PJ. The endosymbiotic origin, diversification and fate of plastids. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 365: 729-48. PMID 20124341 DOI: 10.1098/Rstb.2009.0103 |
0.465 |
|
| 2010 |
Carpenter KJ, Horak A, Keeling PJ. Phylogenetic position and morphology of spirotrichosomidae (parabasalia): new evidence from Leptospironympha of Cryptocercus punctulatus. Protist. 161: 122-32. PMID 19664955 DOI: 10.1016/J.Protis.2009.06.003 |
0.374 |
|
| 2010 |
Gile GH, Stern RF, James ER, Keeling PJ. DNA barcoding of chlorarachniophytes using nucleomorph its sequences Journal of Phycology. 46: 743-750. DOI: 10.1111/J.1529-8817.2010.00851.X |
0.8 |
|
| 2010 |
Keeling PJ, Leander BS, Lukeš J. Reply to Speijer: Does complexity necessarily arise from selective advantage? Proceedings of the National Academy of Sciences of the United States of America. 107: E26. DOI: 10.1073/Pnas.0911933107 |
0.573 |
|
| 2009 |
Burki F, Inagaki Y, Bråte J, Archibald JM, Keeling PJ, Cavalier-Smith T, Sakaguchi M, Hashimoto T, Horak A, Kumar S, Klaveness D, Jakobsen KS, Pawlowski J, Shalchian-Tabrizi K. Large-scale phylogenomic analyses reveal that two enigmatic protist lineages, telonemia and centroheliozoa, are related to photosynthetic chromalveolates. Genome Biology and Evolution. 1: 231-8. PMID 20333193 DOI: 10.1093/Gbe/Evp022 |
0.771 |
|
| 2009 |
Keeling PJ. Functional and ecological impacts of horizontal gene transfer in eukaryotes. Current Opinion in Genetics & Development. 19: 613-9. PMID 19897356 DOI: 10.1016/J.Gde.2009.10.001 |
0.436 |
|
| 2009 |
Corradi N, Haag KL, Pombert JF, Ebert D, Keeling PJ. Draft genome sequence of the Daphnia pathogen Octosporea bayeri: insights into the gene content of a large microsporidian genome and a model for host-parasite interactions. Genome Biology. 10: R106. PMID 19807911 DOI: 10.1186/Gb-2009-10-10-R106 |
0.486 |
|
| 2009 |
Okamoto N, Chantangsi C, Horák A, Leander BS, Keeling PJ. Molecular phylogeny and description of the novel katablepharid Roombia truncata gen. et sp. nov., and establishment of the Hacrobia taxon nov. Plos One. 4: e7080. PMID 19759916 DOI: 10.1371/Journal.Pone.0007080 |
0.644 |
|
| 2009 |
Harper JT, Gile GH, James ER, Carpenter KJ, Keeling PJ. The inadequacy of morphology for species and genus delineation in microbial eukaryotes: an example from the parabasalian termite symbiont coronympha. Plos One. 4: e6577. PMID 19668363 DOI: 10.1371/Journal.Pone.0006577 |
0.806 |
|
| 2009 |
Gile GH, Novis PM, Cragg DS, Zuccarello GC, Keeling PJ. The distribution of Elongation Factor-1 Alpha (EF-1alpha), Elongation Factor-Like (EFL), and a non-canonical genetic code in the ulvophyceae: discrete genetic characters support a consistent phylogenetic framework. The Journal of Eukaryotic Microbiology. 56: 367-72. PMID 19602082 DOI: 10.1111/J.1550-7408.2009.00411.X |
0.793 |
|
| 2009 |
Elias M, Patron NJ, Keeling PJ. The RAB family GTPase Rab1A from Plasmodium falciparum defines a unique paralog shared by chromalveolates and rhizaria. The Journal of Eukaryotic Microbiology. 56: 348-56. PMID 19602080 DOI: 10.1111/J.1550-7408.2009.00408.X |
0.696 |
|
| 2009 |
Carpenter KJ, Chow L, Keeling PJ. Morphology, phylogeny, and diversity of Trichonympha (Parabasalia: Hypermastigida) of the wood-feeding cockroach Cryptocercus punctulatus. The Journal of Eukaryotic Microbiology. 56: 305-13. PMID 19602076 DOI: 10.1111/J.1550-7408.2009.00406.X |
0.434 |
|
| 2009 |
Lukes J, Leander BS, Keeling PJ. Cascades of convergent evolution: the corresponding evolutionary histories of euglenozoans and dinoflagellates. Proceedings of the National Academy of Sciences of the United States of America. 106: 9963-70. PMID 19528647 DOI: 10.1073/Pnas.0901004106 |
0.644 |
|
| 2009 |
Slamovits CH, Keeling PJ. Evolution of ultrasmall spliceosomal introns in highly reduced nuclear genomes. Molecular Biology and Evolution. 26: 1699-705. PMID 19380463 DOI: 10.1093/Molbev/Msp081 |
0.805 |
|
| 2009 |
Gile GH, Faktorová D, Castlejohn CA, Burger G, Lang BF, Farmer MA, Lukes J, Keeling PJ. Distribution and phylogeny of EFL and EF-1alpha in Euglenozoa suggest ancestral co-occurrence followed by differential loss. Plos One. 4: e5162. PMID 19357788 DOI: 10.1371/Journal.Pone.0005162 |
0.784 |
|
| 2009 |
Keeling PJ. Chromalveolates and the evolution of plastids by secondary endosymbiosis Journal of Eukaryotic Microbiology. 56: 1-8. PMID 19335769 DOI: 10.1111/J.1550-7408.2008.00371.X |
0.411 |
|
| 2009 |
Keeling PJ. Role of horizontal gene transfer in the evolution of photosynthetic eukaryotes and their plastids Methods in Molecular Biology (Clifton, N.J.). 532: 501-515. PMID 19271204 DOI: 10.1007/978-1-60327-853-9_29 |
0.448 |
|
| 2009 |
Akiyoshi DE, Morrison HG, Lei S, Feng X, Zhang Q, Corradi N, Mayanja H, Tumwine JK, Keeling PJ, Weiss LM, Tzipori S. Genomic survey of the non-cultivatable opportunistic human pathogen, Enterocytozoon bieneusi Plos Pathogens. 5. PMID 19132089 DOI: 10.1371/Journal.Ppat.1000261 |
0.449 |
|
| 2009 |
Corradi N, Keeling PJ. Microsporidia: a journey through radical taxonomical revisions Fungal Biology Reviews. 23: 1-8. DOI: 10.1016/J.Fbr.2009.05.001 |
0.464 |
|
| 2008 |
McEwan M, Humayun R, Slamovits CH, Keeling PJ. Nuclear genome sequence survey of the dinoflagellate Heterocapsa triquetra Journal of Eukaryotic Microbiology. 55: 530-535. PMID 19120799 DOI: 10.1111/J.1550-7408.2008.00357.X |
0.819 |
|
| 2008 |
Lee RC, Williams BA, Brown AM, Adamson ML, Keeling PJ, Fast NM. Alpha- and beta-tubulin phylogenies support a close relationship between the microsporidia Brachiola algerae and Antonospora locustae. The Journal of Eukaryotic Microbiology. 55: 388-92. PMID 19017059 DOI: 10.1111/J.1550-7408.2008.00348.X |
0.738 |
|
| 2008 |
Lee SC, Corradi N, Byrnes EJ, Torres-Martinez S, Dietrich FS, Keeling PJ, Heitman J. Microsporidia evolved from ancestral sexual fungi. Current Biology : Cb. 18: 1675-9. PMID 18976912 DOI: 10.1016/J.Cub.2008.09.030 |
0.486 |
|
| 2008 |
Corradi N, Burri L, Keeling PJ. mRNA processing in Antonospora locustae spores Molecular Genetics and Genomics. 280: 565-574. PMID 18818951 DOI: 10.1007/S00438-008-0387-5 |
0.719 |
|
| 2008 |
Slamovits CH, Keeling PJ. Widespread recycling of processed cDNAs in dinoflagellates Current Biology. 18: R550-R552. PMID 18606121 DOI: 10.1016/J.Cub.2008.04.054 |
0.823 |
|
| 2008 |
Gile GH, Keeling PJ. Nucleus-encoded periplastid-targeted EFL in chlorarachniophytes Molecular Biology and Evolution. 25: 1967-1977. PMID 18599495 DOI: 10.1093/Molbev/Msn147 |
0.804 |
|
| 2008 |
Keeling PJ, Palmer JD. Horizontal gene transfer in eukaryotic evolution. Nature Reviews. Genetics. 9: 605-18. PMID 18591983 DOI: 10.1038/Nrg2386 |
0.594 |
|
| 2008 |
Williams BA, Lee RC, Becnel JJ, Weiss LM, Fast NM, Keeling PJ. Genome sequence surveys of Brachiola algerae and Edhazardia aedis reveal microsporidia with low gene densities. Bmc Genomics. 9: 200. PMID 18445287 DOI: 10.1186/1471-2164-9-200 |
0.759 |
|
| 2008 |
Keeling PJ, Archibald JM. Organelle evolution: what's in a name? Current Biology : Cb. 18: R345-7. PMID 18430636 DOI: 10.1016/J.Cub.2008.02.065 |
0.735 |
|
| 2008 |
Slamovits CH, Keeling PJ. Plastid-derived genes in the nonphotosynthetic alveolate Oxyrrhis marina Molecular Biology and Evolution. 25: 1297-1306. PMID 18385218 DOI: 10.1093/Molbev/Msn075 |
0.813 |
|
| 2008 |
Williams BA, Cali A, Takvorian PM, Keeling PJ. Distinct localization patterns of two putative mitochondrial proteins in the microsporidian Encephalitozoon cuniculi. The Journal of Eukaryotic Microbiology. 55: 131-3. PMID 18318866 DOI: 10.1111/J.1550-7408.2008.00315.X |
0.712 |
|
| 2008 |
Keeling PJ. Evolutionary biology: Bridge over troublesome plastids Nature. 451: 896-897. PMID 18288173 DOI: 10.1038/451896A |
0.375 |
|
| 2008 |
Corradi N, Gangaeva A, Keeling PJ. Comparative profiling of overlapping transcription in the compacted genomes of microsporidia Antonospora locustae and Encephalitozoon cuniculi Genomics. 91: 388-393. PMID 18280697 DOI: 10.1016/J.Ygeno.2007.12.006 |
0.461 |
|
| 2008 |
De Koning AP, Noble GP, Heiss AA, Wong J, Keeling PJ. Environmental PCR survey to determine the distribution of a non-canonical genetic code in uncultivable oxymonads Environmental Microbiology. 10: 65-74. PMID 18211267 DOI: 10.1111/J.1462-2920.2007.01430.X |
0.797 |
|
| 2008 |
Williams BA, Haferkamp I, Keeling PJ. An ADP/ATP-specific mitochondrial carrier protein in the microsporidian Antonospora locustae. Journal of Molecular Biology. 375: 1249-57. PMID 18078956 DOI: 10.1016/J.Jmb.2007.11.005 |
0.719 |
|
| 2008 |
Carpenter KJ, Waller RF, Keeling PJ. Surface morphology of Saccinobaculus (Oxymonadida): implications for character evolution and function in oxymonads. Protist. 159: 209-21. PMID 18024180 DOI: 10.1016/J.Protis.2007.09.002 |
0.635 |
|
| 2007 |
Corradi N, Akiyoshi DE, Morrison HG, Feng X, Weiss LM, Tzipori S, Keeling PJ. Patterns of genome evolution among the Microsporidian parasites Encephalitozoon cuniculi, Antonospora locustae and enterocytozoon bieneusi Plos One. 2. PMID 18060071 DOI: 10.1371/Journal.Pone.0001277 |
0.505 |
|
| 2007 |
Keeling PJ. Genomics: Deep questions in the tree of life Science. 317: 1875-1876. PMID 17901321 DOI: 10.1126/Science.1149593 |
0.422 |
|
| 2007 |
Jackson CJ, Norman JE, Schnare MN, Gray MW, Keeling PJ, Waller RF. Broad genomic and transcriptional analysis reveals a highly derived genome in dinoflagellate mitochondria. Bmc Biology. 5: 41. PMID 17897476 DOI: 10.1186/1741-7007-5-41 |
0.746 |
|
| 2007 |
Imanian B, Keeling PJ. The dinoflagellates Durinskia baltica and Kryptoperidinium foliaceum retain functionally overlapping mitochondria from two evolutionarily distinct lineages Bmc Evolutionary Biology. 7. PMID 17892581 DOI: 10.1186/1471-2148-7-172 |
0.802 |
|
| 2007 |
Carpenter KJ, Keeling PJ. Morphology and phylogenetic position of Eucomonympha imla (Parabasalia: Hypermastigida). The Journal of Eukaryotic Microbiology. 54: 325-32. PMID 17669157 DOI: 10.1111/J.1550-7408.2007.00263.X |
0.4 |
|
| 2007 |
Slamovits CH, Saldarriaga JF, Larocque A, Keeling PJ. The Highly Reduced and Fragmented Mitochondrial Genome of the Early-branching Dinoflagellate Oxyrrhis marina Shares Characteristics with both Apicomplexan and Dinoflagellate Mitochondrial Genomes Journal of Molecular Biology. 372: 356-368. PMID 17655860 DOI: 10.1016/J.Jmb.2007.06.085 |
0.835 |
|
| 2007 |
Rogers MB, Patron NJ, Keeling PJ. Horizontal transfer of a eukaryotic plastid-targeted protein gene to cyanobacteria. Bmc Biology. 5: 26. PMID 17584924 DOI: 10.1186/1741-7007-5-26 |
0.786 |
|
| 2007 |
Rogers MB, Watkins RF, Harper JT, Durnford DG, Gray MW, Keeling PJ. A complex and punctate distribution of three eukaryotic genes derived by lateral gene transfer. Bmc Evolutionary Biology. 7: 89. PMID 17562012 DOI: 10.1186/1471-2148-7-89 |
0.735 |
|
| 2007 |
Noble GP, Rogers MB, Keeling PJ. Complex distribution of EFL and EF-1alpha proteins in the green algal lineage. Bmc Evolutionary Biology. 7: 82. PMID 17521426 DOI: 10.1186/1471-2148-7-82 |
0.554 |
|
| 2007 |
Patron NJ, Inagaki Y, Keeling PJ. Multiple gene phylogenies support the monophyly of cryptomonad and haptophyte host lineages. Current Biology : Cb. 17: 887-91. PMID 17462896 DOI: 10.1016/J.Cub.2007.03.069 |
0.722 |
|
| 2007 |
Imanian B, Carpenter KJ, Keeling PJ. Mitochondrial genome of a tertiary endosymbiont retains genes for electron transport proteins. The Journal of Eukaryotic Microbiology. 54: 146-53. PMID 17403155 DOI: 10.1111/J.1550-7408.2007.00245.X |
0.809 |
|
| 2007 |
Keeling PJ. Ostreococcus tauri: seeing through the genes to the genome Trends in Genetics. 23: 151-154. PMID 17331615 DOI: 10.1016/J.Tig.2007.02.008 |
0.457 |
|
| 2007 |
Koziol AG, Borza T, Ishida K, Keeling P, Lee RW, Durnford DG. Tracing the evolution of the light-harvesting antennae in chlorophyll a/b-containing organisms. Plant Physiology. 143: 1802-16. PMID 17307901 DOI: 10.1104/Pp.106.092536 |
0.726 |
|
| 2007 |
Akiyoshi DE, Weiss LM, Feng X, Williams BA, Keeling PJ, Zhang Q, Tzipori S. Analysis of the beta-tubulin genes from Enterocytozoon bieneusi isolates from a human and rhesus macaque. The Journal of Eukaryotic Microbiology. 54: 38-41. PMID 17300517 DOI: 10.1111/J.1550-7408.2006.00140.X |
0.681 |
|
| 2007 |
Burri L, Keeling PJ. Protein targeting in parasites with cryptic mitochondria International Journal For Parasitology. 37: 265-272. PMID 17250838 DOI: 10.1016/J.Ijpara.2006.12.004 |
0.727 |
|
| 2007 |
Rogers MB, Gilson PR, Su V, McFadden GI, Keeling PJ. The complete chloroplast genome of the chlorarachniophyte Bigelowiella natans: evidence for independent origins of chlorarachniophyte and euglenid secondary endosymbionts. Molecular Biology and Evolution. 24: 54-62. PMID 16990439 DOI: 10.1093/Molbev/Msl129 |
0.691 |
|
| 2006 |
Burri L, Williams BA, Bursac D, Lithgow T, Keeling PJ. Microsporidian mitosomes retain elements of the general mitochondrial targeting system. Proceedings of the National Academy of Sciences of the United States of America. 103: 15916-20. PMID 17043242 DOI: 10.1073/Pnas.0604109103 |
0.818 |
|
| 2006 |
Waller RF, Keeling PJ. Alveolate and chlorophycean mitochondrial cox2 genes split twice independently Gene. 383: 33-37. PMID 16987614 DOI: 10.1016/J.Gene.2006.07.003 |
0.694 |
|
| 2006 |
Gould SB, Sommer MS, Kroth PG, Gile GH, Keeling PJ, Maier UG. Nucleus-to-nucleus gene transfer and protein retargeting into a remnant cytoplasm of cryptophytes and diatoms Molecular Biology and Evolution. 23: 2413-2422. PMID 16971693 DOI: 10.1093/Molbev/Msl113 |
0.806 |
|
| 2006 |
Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, ... ... Keeling PJ, et al. Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote. Plos Biology. 4: e286. PMID 16933976 DOI: 10.1371/Journal.Pbio.0040286 |
0.814 |
|
| 2006 |
Gile GH, Patron NJ, Keeling PJ. EFL GTPase in Cryptomonads and the Distribution of EFL and EF-1α in Chromalveolates Protist. 157: 435-444. PMID 16904374 DOI: 10.1016/J.Protis.2006.06.002 |
0.825 |
|
| 2006 |
Heiss AA, Keeling PJ. The Phylogenetic Position of the Oxymonad Saccinobaculus Based on SSU rRNA Protist. 157: 335-344. PMID 16839812 DOI: 10.1016/J.Protis.2006.05.007 |
0.823 |
|
| 2006 |
Patron NJ, Rogers MB, Keeling PJ. Comparative rates of evolution in endosymbiotic nuclear genomes. Bmc Evolutionary Biology. 6: 46. PMID 16772046 DOI: 10.1186/1471-2148-6-46 |
0.78 |
|
| 2006 |
Gilson PR, Su V, Slamovits CH, Reith ME, Keeling PJ, McFadden GI. Complete nucleotide sequence of the chlorarachniophyte nucleomorph: Nature's smallest nucleus Proceedings of the National Academy of Sciences of the United States of America. 103: 9566-9571. PMID 16760254 DOI: 10.1073/Pnas.0600707103 |
0.84 |
|
| 2006 |
Waller RF, Patron NJ, Keeling PJ. Phylogenetic history of plastid-targeted proteins in the peridinin-containing dinoflagellate Heterocapsa triquetra International Journal of Systematic and Evolutionary Microbiology. 56: 1439-1447. PMID 16738125 DOI: 10.1099/Ijs.0.64061-0 |
0.818 |
|
| 2006 |
Waller RF, Slamovits CH, Keeling PJ. Lateral gene transfer of a multigene region from cyanobacteria to dinoflagellates resulting in a novel plastid-targeted fusion protein Molecular Biology and Evolution. 23: 1437-1443. PMID 16675503 DOI: 10.1093/Molbev/Msl008 |
0.823 |
|
| 2006 |
Slamovits CH, Burri L, Keeling PJ. Characterization of a Divergent Sec61β Gene in Microsporidia Journal of Molecular Biology. 359: 1196-1202. PMID 16650859 DOI: 10.1016/J.Jmb.2006.04.028 |
0.831 |
|
| 2006 |
Slamovits CH, Keeling PJ. A high density of ancient spliceosomal introns in oxymonad excavates Bmc Evolutionary Biology. 6. PMID 16638131 DOI: 10.1186/1471-2148-6-34 |
0.826 |
|
| 2006 |
de Koning AP, Keeling PJ. The complete plastid genome sequence of the parasitic green alga Helicosporidium sp. is highly reduced and structured Bmc Biology. 4. PMID 16630350 DOI: 10.1186/1741-7007-4-12 |
0.449 |
|
| 2006 |
Keeling PJ, Brugerolle G. Evidence from SSU rRNA Phylogeny that Octomitus is a Sister Lineage to Giardia Protist. 157: 205-212. PMID 16618550 DOI: 10.1016/J.Protis.2006.01.003 |
0.389 |
|
| 2006 |
Patron NJ, Waller RF, Keeling PJ. A tertiary plastid uses genes from two endosymbionts Journal of Molecular Biology. 357: 1373-1382. PMID 16490209 DOI: 10.1016/J.Jmb.2006.01.084 |
0.792 |
|
| 2006 |
Slamovits CH, Keeling PJ. Pyruvate-phosphate dikinase of oxymonads and parabasalia and the evolution of pyrophosphate-dependent glycolysis in anaerobic eukaryotes Eukaryotic Cell. 5: 148-154. PMID 16400177 DOI: 10.1128/Ec.5.1.148-154.2006 |
0.792 |
|
| 2006 |
LEANDER BS, KEELING PJ. THE KINGDOM PROTISTA: THE DAZZLING WORLD OF LIVING CELLS by Pickett-Heaps, Jeremy D. and Pickett-Heaps, Julianne Journal of Phycology. 42: 1155-1156. DOI: 10.1111/J.1529-8817.2006.00272.X |
0.523 |
|
| 2005 |
Keeling PJ, Burger G, Durnford DG, Lang BF, Lee RW, Pearlman RE, Roger AJ, Gray MW. The tree of eukaryotes. Trends in Ecology & Evolution. 20: 670-6. PMID 16701456 DOI: 10.1016/J.Tree.2005.09.005 |
0.764 |
|
| 2005 |
Keeling PJ, Slamovits CH. Causes and effects of nuclear genome reduction Current Opinion in Genetics and Development. 15: 601-608. PMID 16188433 DOI: 10.1016/J.Gde.2005.09.003 |
0.822 |
|
| 2005 |
De Koning AP, Tartar A, Boucias DG, Keeling PJ. Expressed sequence tag (EST) survey of the highly adapted green algal parasite, Helicosporidium Protist. 156: 181-190. PMID 16171185 DOI: 10.1016/J.Protis.2005.02.005 |
0.488 |
|
| 2005 |
Williams BA, Slamovits CH, Patron NJ, Fast NM, Keeling PJ. A high frequency of overlapping gene expression in compacted eukaryotic genomes. Proceedings of the National Academy of Sciences of the United States of America. 102: 10936-41. PMID 16037215 DOI: 10.1073/Pnas.0501321102 |
0.825 |
|
| 2005 |
Takishita K, Patron NJ, Ishida KI, Maruyama T, Keeling PJ. A transcriptional fusion of genes encoding glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and enolase in dinoflagellates Journal of Eukaryotic Microbiology. 52: 343-348. PMID 16014012 DOI: 10.1111/J.1550-7408.2005.00042X |
0.793 |
|
| 2005 |
Keeling PJ, Fast NM, Law JS, Williams BA, Slamovits CH. Comparative genomics of microsporidia. Folia Parasitologica. 52: 8-14. PMID 16004359 DOI: 10.14411/Fp.2005.002 |
0.837 |
|
| 2005 |
Williams BA, Keeling PJ. Microsporidian mitochondrial proteins: expression in Antonospora locustae spores and identification of genes coding for two further proteins. The Journal of Eukaryotic Microbiology. 52: 271-6. PMID 15927004 DOI: 10.1111/J.1550-7408.2005.05-00036.X |
0.751 |
|
| 2005 |
Patron NJ, Waller RF, Archibald JM, Keeling PJ. Complex protein targeting to dinoflagellate plastids. Journal of Molecular Biology. 348: 1015-24. PMID 15843030 DOI: 10.1016/J.Jmb.2005.03.030 |
0.782 |
|
| 2005 |
Liki? VA, Perry A, Hulett J, Derby M, Traven A, Waller RF, Keeling PJ, Koehler CM, Curran SP, Gooley PR, Lithgow T. Patterns that define the four domains conserved in known and novel isoforms of the protein import receptor Tom20 Journal of Molecular Biology. 347: 81-93. PMID 15733919 DOI: 10.1016/J.Jmb.2004.12.057 |
0.65 |
|
| 2005 |
Harper JT, Waanders E, Keeling PJ. On the monophyly of chromalveolates using a six-protein phylogeny of eukaryotes International Journal of Systematic and Evolutionary Microbiology. 55: 487-496. PMID 15653923 DOI: 10.1099/Ijs.0.63216-0 |
0.491 |
|
| 2005 |
Keeling P. A brief history of plastids and their hosts. Protist. 155: 3-7. PMID 15144050 DOI: 10.1078/1434461000156 |
0.308 |
|
| 2005 |
WALLER RF, PATRON NJ, KEELING PJ. Filling in the gaps: EST surveys of under-represented chromalveolates The Journal of Eukaryotic Microbiology. 52: 7S-27S. DOI: 10.1111/J.1550-7408.2005.05202003_1_80.X |
0.796 |
|
| 2005 |
SLAMOVITS CH, KEELING PJ. Genome evolution in Microsporidia The Journal of Eukaryotic Microbiology. 52: 7S-27S. DOI: 10.1111/J.1550-7408.2005.05202003_1_70.X |
0.838 |
|
| 2005 |
KEELING PJ, PATRON NJ, ROGERS MB. Molecular evidence for a single common origin of chromalveolate plastids The Journal of Eukaryotic Microbiology. 52: 7S-27S. DOI: 10.1111/J.1550-7408.2005.05202003_1_40.X |
0.75 |
|
| 2005 |
Patron NJ, Keeling PJ. Common evolutionary origin of starch biosynthetic enzymes in green and red algae Journal of Phycology. 41: 1131-1141. DOI: 10.1111/J.1529-8817.2005.00135.X |
0.668 |
|
| 2004 |
Keeling PJ. Diversity and evolutionary history of plastids and their hosts. American Journal of Botany. 91: 1481-93. PMID 21652304 DOI: 10.3732/Ajb.91.10.1481 |
0.432 |
|
| 2004 |
McEwan ML, Keeling PJ. HSP90, tubulin and actin are retained in the tertiary endosymbiont genome of Kryptoperidinium foliaceum Journal of Eukaryotic Microbiology. 51: 651-659. PMID 15666722 DOI: 10.1111/J.1550-7408.2004.Tb00604.X |
0.476 |
|
| 2004 |
Keeling PJ, Archibald JM, Fast NM, Palmer JD. Comment on "The evolution of modern eukaryotic phytoplankton". Science (New York, N.Y.). 306: 2191; author reply 2. PMID 15618503 DOI: 10.1126/Science.1103879 |
0.725 |
|
| 2004 |
Keeling PJ, Slamovits CH. Simplicity and complexity of microsporidian genomes Eukaryotic Cell. 3: 1363-1369. PMID 15590811 DOI: 10.1128/Ec.3.6.1363-1369.2004 |
0.808 |
|
| 2004 |
Rogers MB, Archibald JM, Field MA, Li C, Striepen B, Keeling PJ. Plastid-targeting peptides from the chlorarachniophyte Bigelowiella natans. The Journal of Eukaryotic Microbiology. 51: 529-35. PMID 15537087 DOI: 10.1111/J.1550-7408.2004.Tb00288.X |
0.773 |
|
| 2004 |
Keeling PJ, Inagaki Y. A class of eukaryotic GTPase with a punctate distribution suggesting multiple functional replacements of translation elongation factor 1α Proceedings of the National Academy of Sciences of the United States of America. 101: 15380-15385. PMID 15492217 DOI: 10.1073/Pnas.0404505101 |
0.376 |
|
| 2004 |
Harper JT, Keeling PJ. Lateral gene transfer and the complex distribution of insertions in eukaryotic enolase Gene. 340: 227-235. PMID 15475163 DOI: 10.1016/J.Gene.2004.06.048 |
0.439 |
|
| 2004 |
De Koning AP, Keeling PJ. Nucleus-encoded genes for plastid-targeted proteins in Helicosporidium: Functional diversity of a cryptic plastid in a parasitic alga Eukaryotic Cell. 3: 1198-1205. PMID 15470248 DOI: 10.1128/Ec.3.5.1198-1205.2004 |
0.417 |
|
| 2004 |
Patron NJ, Rogers MB, Keeling PJ. Gene replacement of fructose-1,6-bisphosphate aldolase supports the hypothesis of a single photosynthetic ancestor of chromalveolates. Eukaryotic Cell. 3: 1169-75. PMID 15470245 DOI: 10.1128/Ec.3.5.1169-1175.2004 |
0.747 |
|
| 2004 |
Slamovits CH, Keeling PJ. Class II photolyase in a microsporidian intracellular parasite Journal of Molecular Biology. 341: 713-721. PMID 15288781 DOI: 10.1016/J.Jmb.2004.06.032 |
0.799 |
|
| 2004 |
Leander BS, Keeling PJ. Symbiotic innovation in the oxymonad Streblomastix strix. The Journal of Eukaryotic Microbiology. 51: 291-300. PMID 15218697 DOI: 10.1111/J.1550-7408.2004.Tb00569.X |
0.577 |
|
| 2004 |
Slamovits CH, Fast NM, Law JS, Keeling PJ. Genome compaction and stability in microsporidian intracellular parasites. Current Biology : Cb. 14: 891-6. PMID 15186746 DOI: 10.1016/J.Cub.2004.04.041 |
0.824 |
|
| 2004 |
Keeling PJ. Polymorphic insertions and deletions in parabasalian enolase genes. Journal of Molecular Evolution. 58: 550-6. PMID 15170258 DOI: 10.1007/S00239-003-2577-4 |
0.431 |
|
| 2004 |
Slamovits CH, Williams BA, Keeling PJ. Transfer of Nosema locustae (Microsporidia) to Antonospora locustae n. comb. based on molecular and ultrastructural data. The Journal of Eukaryotic Microbiology. 51: 207-13. PMID 15134257 DOI: 10.1111/J.1550-7408.2004.Tb00547.X |
0.8 |
|
| 2004 |
Keeling PJ. Reduction and compaction in the genome of the apicomplexan parasite Cryptosporidium parvum Developmental Cell. 6: 614-616. PMID 15130487 DOI: 10.1016/S1534-5807(04)00135-2 |
0.491 |
|
| 2004 |
Rogers M, Keeling PJ. Lateral transfer and recompartmentalization of Calvin cycle enzymes of plants and algae. Journal of Molecular Evolution. 58: 367-75. PMID 15114416 DOI: 10.1007/S00239-003-2558-7 |
0.62 |
|
| 2004 |
Archibald JM, Keeling PJ. Actin and ubiquitin protein sequences support a cercozoan/foraminiferan ancestry for the plasmodiophorid plant pathogens. The Journal of Eukaryotic Microbiology. 51: 113-8. PMID 15068273 DOI: 10.1111/J.1550-7408.2004.Tb00172.X |
0.753 |
|
| 2004 |
Gerbod D, Sanders E, Moriya S, Noël C, Takasu H, Fast NM, Delgado-Viscogliosi P, Ohkuma M, Kudo T, Capron M, Palmer JD, Keeling PJ, Viscogliosi E. Molecular phylogenies of Parabasalia inferred from four protein genes and comparison with rRNA trees. Molecular Phylogenetics and Evolution. 31: 572-80. PMID 15062795 DOI: 10.1016/J.Ympev.2003.09.013 |
0.614 |
|
| 2004 |
Leander BS, Keeling PJ. EARLY EVOLUTIONARY HISTORY OF DINOFLAGELLATES AND APICOMPLEXANS (ALVEOLATA) AS INFERRED FROM HSP90 AND ACTIN PHYLOGENIES1 Journal of Phycology. 40: 341-350. DOI: 10.1111/J.1529-8817.2004.03129.X |
0.649 |
|
| 2004 |
Saldarriaga JF, Taylor FJR, Cavalier-Smith T, Menden-Deuer S, Keeling PJ. Molecular data and the evolutionary history of dinoflagellates European Journal of Protistology. 40: 85-111. DOI: 10.1016/J.Ejop.2003.11.003 |
0.724 |
|
| 2003 |
Leander BS, Harper JT, Keeling PJ. Molecular phylogeny and surface morphology of marine aseptate gregarines (Apicomplexa): Selenidium spp. and Lecudina spp. The Journal of Parasitology. 89: 1191-205. PMID 14740910 DOI: 10.1645/Ge-3155 |
0.659 |
|
| 2003 |
Williams BA, Keeling PJ. Cryptic organelles in parasitic protists and fungi. Advances in Parasitology. 54: 9-68. PMID 14711083 DOI: 10.1016/S0065-308X(03)54001-5 |
0.739 |
|
| 2003 |
Longet D, Archibald JM, Keeling PJ, Pawlowski J. Foraminifera and Cercozoa share a common origin according to RNA polymerase II phylogenies. International Journal of Systematic and Evolutionary Microbiology. 53: 1735-9. PMID 14657101 DOI: 10.1099/Ijs.0.02597-0 |
0.728 |
|
| 2003 |
Leander BS, Kuvardina ON, Aleshin VV, Mylnikov AP, Keeling PJ. Molecular phylogeny and surface morphology of Colpodella edax (Alveolata): insights into the phagotrophic ancestry of apicomplexans. The Journal of Eukaryotic Microbiology. 50: 334-40. PMID 14563171 DOI: 10.1111/J.1550-7408.2003.Tb00145.X |
0.646 |
|
| 2003 |
Fast NM, Law JS, Williams BA, Keeling PJ. Bacterial catalase in the microsporidian Nosema locustae: implications for microsporidian metabolism and genome evolution. Eukaryotic Cell. 2: 1069-75. PMID 14555490 DOI: 10.1128/Ec.2.5.1069-1075.2003 |
0.778 |
|
| 2003 |
Ryall K, Harper JT, Keeling PJ. Plastid-derived Type II fatty acid biosynthetic enzymes in chromists. Gene. 313: 139-48. PMID 12957385 DOI: 10.1016/S0378-1119(03)00671-1 |
0.317 |
|
| 2003 |
Harper JT, Keeling PJ. Nucleus-encoded, plastid-targeted glyceraldehyde-3-phosphate dehydrogenase (GAPDH) indicates a single origin for chromalveolate plastids. Molecular Biology and Evolution. 20: 1730-5. PMID 12885964 DOI: 10.1093/Molbev/Msg195 |
0.424 |
|
| 2003 |
Waller RF, Keeling PJ, van Dooren GG, McFadden GI. Comment on "A green algal apicoplast ancestor". Science (New York, N.Y.). 301: 49; author reply 49. PMID 12843377 DOI: 10.1126/Science.1083647 |
0.593 |
|
| 2003 |
Archibald JM, Rogers MB, Toop M, Ishida K, Keeling PJ. Lateral gene transfer and the evolution of plastid-targeted proteins in the secondary plastid-containing alga Bigelowiella natans. Proceedings of the National Academy of Sciences of the United States of America. 100: 7678-83. PMID 12777624 DOI: 10.1073/Pnas.1230951100 |
0.828 |
|
| 2003 |
Archibald JM, Teh EM, Keeling PJ. Novel ubiquitin fusion proteins: ribosomal protein P1 and actin. Journal of Molecular Biology. 328: 771-8. PMID 12729753 DOI: 10.1016/S0022-2836(03)00374-7 |
0.696 |
|
| 2003 |
Keeling PJ. Congruent evidence from alpha-tubulin and beta-tubulin gene phylogenies for a zygomycete origin of microsporidia. Fungal Genetics and Biology : Fg & B. 38: 298-309. PMID 12684019 DOI: 10.1016/S1087-1845(02)00537-6 |
0.381 |
|
| 2003 |
Saldarriaga JF, McEwan ML, Fast NM, Taylor FJ, Keeling PJ. Multiple protein phylogenies show that Oxyrrhis marina and Perkinsus marinus are early branches of the dinoflagellate lineage. International Journal of Systematic and Evolutionary Microbiology. 53: 355-65. PMID 12656195 DOI: 10.1099/Ijs.0.02328-0 |
0.732 |
|
| 2003 |
Leander BS, Clopton RE, Keeling PJ. Phylogeny of gregarines (Apicomplexa) as inferred from small-subunit rDNA and beta-tubulin. International Journal of Systematic and Evolutionary Microbiology. 53: 345-54. PMID 12656194 DOI: 10.1099/Ijs.0.02284-0 |
0.645 |
|
| 2003 |
Keeling PJ, Leander BS. Characterisation of a non-canonical genetic code in the oxymonad Streblomastix strix. Journal of Molecular Biology. 326: 1337-49. PMID 12595248 DOI: 10.1016/S0022-2836(03)00057-3 |
0.603 |
|
| 2003 |
Archibald JM, Keeling PJ. Comparative genomics. Plant genomes: cyanobacterial genes revealed. Heredity. 90: 2-3. PMID 12522415 DOI: 10.1038/Sj.Hdy.6800204 |
0.734 |
|
| 2003 |
Archibald JM, Longet D, Pawlowski J, Keeling PJ. A novel polyubiquitin structure in Cercozoa and Foraminifera: evidence for a new eukaryotic supergroup. Molecular Biology and Evolution. 20: 62-6. PMID 12519907 DOI: 10.1093/Molbev/Msg006 |
0.731 |
|
| 2003 |
Harper JT, Keeling PJ. 64 Nucleus‐encoded, plastid‐targeted glyceraldehyde‐3‐phosphate dehydrogenase (GAPDH) indicates a single origin for chromalveolate plastids Journal of Phycology. 39: 22-22. DOI: 10.1111/J.0022-3646.2003.03906001_64.X |
0.442 |
|
| 2003 |
Saldarriaga JF, Leander BS, “Max” Taylor FJR, Keeling PJ. LESSARDIA ELONGATA GEN. ET SP. NOV. (DINOFLAGELLATA, PERIDINIALES, PODOLAMPACEAE) AND THE TAXONOMIC POSITION OF THE GENUS ROSCOFFIA1 Journal of Phycology. 39: 368-378. DOI: 10.1046/J.1529-8817.2003.02113.X |
0.756 |
|
| 2003 |
Leander BS, Keeling PJ. Morphostasis in alveolate evolution Trends in Ecology & Evolution. 18: 395-402. DOI: 10.1016/S0169-5347(03)00152-6 |
0.63 |
|
| 2002 |
Kuvardina ON, Leander BS, Aleshin VV, Myl'nikov AP, Keeling PJ, Simdyanov TG. The phylogeny of colpodellids (Alveolata) using small subunit rRNA gene sequences suggests they are the free-living sister group to apicomplexans. The Journal of Eukaryotic Microbiology. 49: 498-504. PMID 12503687 DOI: 10.1111/J.1550-7408.2002.Tb00235.X |
0.654 |
|
| 2002 |
Archibald JM, Keeling PJ. Recycled plastids: a 'green movement' in eukaryotic evolution. Trends in Genetics : Tig. 18: 577-84. PMID 12414188 DOI: 10.1016/S0168-9525(02)02777-4 |
0.736 |
|
| 2002 |
Brinkman FS, Blanchard JL, Cherkasov A, Av-Gay Y, Brunham RC, Fernandez RC, Finlay BB, Otto SP, Ouellette BF, Keeling PJ, Rose AM, Hancock RE, Jones SJ, Greberg H. Evidence that plant-like genes in Chlamydia species reflect an ancestral relationship between Chlamydiaceae, cyanobacteria, and the chloroplast. Genome Research. 12: 1159-67. PMID 12176923 DOI: 10.1101/Gr.341802 |
0.431 |
|
| 2002 |
Keeling PJ, Fast NM. Microsporidia: biology and evolution of highly reduced intracellular parasites. Annual Review of Microbiology. 56: 93-116. PMID 12142484 DOI: 10.1146/Annurev.Micro.56.012302.160854 |
0.455 |
|
| 2002 |
Fast NM, Xue L, Bingham S, Keeling PJ. Re-examining alveolate evolution using multiple protein molecular phylogenies. The Journal of Eukaryotic Microbiology. 49: 30-7. PMID 11908896 DOI: 10.1111/J.1550-7408.2002.Tb00336.X |
0.408 |
|
| 2002 |
Qian Q, Keeling PJ. Diplonemid glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and prokaryote-to-eukaryote lateral gene transfer. Protist. 152: 193-201. PMID 11693658 DOI: 10.1078/1434-4610-00059 |
0.408 |
|
| 2002 |
Fast NM, Keeling PJ. Alpha and beta subunits of pyruvate dehydrogenase E1 from the microsporidian Nosema locustae: mitochondrion-derived carbon metabolism in microsporidia. Molecular and Biochemical Parasitology. 117: 201-9. PMID 11606230 DOI: 10.1016/S0166-6851(01)00356-5 |
0.385 |
|
| 2002 |
Leander BS, Saldarriaga JF, Keeling PJ. Surface morphology of the marine parasite Haplozoon axiothellae Siebert (Dinoflagellata) European Journal of Protistology. 38: 287-297. DOI: 10.1078/0932-4739-00882 |
0.748 |
|
| 2002 |
Keeling PJ. Molecular phylogenetic position of Trichomitopsis termopsidis (Parabasalia) and evidence for the Trichomitopsiinae European Journal of Protistology. 38: 279-286. DOI: 10.1078/0932-4739-00874 |
0.419 |
|
| 2001 |
Frankel J, Williams NE, Nelsen EM, Keeling PJ. An evaluation of Hsp90 as a mediator of cortical patterning in Tetrahymena. The Journal of Eukaryotic Microbiology. 48: 147-60. PMID 12095102 DOI: 10.1111/J.1550-7408.2001.Tb00297.X |
0.322 |
|
| 2001 |
Keeling PJ. Parasites go the full monty. Nature. 414: 401-2. PMID 11719785 DOI: 10.1038/35106666 |
0.338 |
|
| 2001 |
Keeling PJ, Palmer JD. Lateral transfer at the gene and subgenic levels in the evolution of eukaryotic enolase. Proceedings of the National Academy of Sciences of the United States of America. 98: 10745-50. PMID 11526220 DOI: 10.1073/Pnas.191337098 |
0.605 |
|
| 2001 |
Saldarriaga JF, Taylor FJ, Keeling PJ, Cavalier-Smith T. Dinoflagellate nuclear SSU rRNA phylogeny suggests multiple plastid losses and replacements. Journal of Molecular Evolution. 53: 204-13. PMID 11523007 DOI: 10.1007/S002390010210 |
0.717 |
|
| 2001 |
Keeling PJ. Foraminifera and Cercozoa are related in actin phylogeny: two orphans find a home? Molecular Biology and Evolution. 18: 1551-7. PMID 11470846 DOI: 10.1093/Oxfordjournals.Molbev.A003941 |
0.443 |
|
| 2001 |
Fast NM, Kissinger JC, Roos DS, Keeling PJ. Nuclear-encoded, plastid-targeted genes suggest a single common origin for apicomplexan and dinoflagellate plastids. Molecular Biology and Evolution. 18: 418-26. PMID 11230543 DOI: 10.1093/Oxfordjournals.Molbev.A003818 |
0.455 |
|
| 2001 |
Stibitz TB, Keeling PJ, Bhattacharya D. Symbiotic origin of a novel actin gene in the cryptophyte Pyrenomonas helgolandii. Molecular Biology and Evolution. 17: 1731-8. PMID 11070060 DOI: 10.1093/Oxfordjournals.Molbev.A026271 |
0.471 |
|
| 2000 |
De Koning AP, Brinkman FSL, Jones SJM, Keeling PJ. Lateral gene transfer and metabolic adaptation in the human parasite trichomonas vaginalis Molecular Biology and Evolution. 17: 1769-1773. PMID 11070064 DOI: 10.1093/Oxfordjournals.Molbev.A026275 |
0.313 |
|
| 2000 |
Keeling PJ, Palmer JD. Parabasalian flagellates are ancient eukaryotes. Nature. 405: 635-7. PMID 10864312 DOI: 10.1038/35015167 |
0.626 |
|
| 2000 |
Keeling PJ, Luker MA, Palmer JD. Evidence from beta-tubulin phylogeny that microsporidia evolved from within the fungi. Molecular Biology and Evolution. 17: 23-31. PMID 10666703 DOI: 10.1093/Oxfordjournals.Molbev.A026235 |
0.555 |
|
| 1999 |
Keeling PJ, Deane JA, Hink-Schauer C, Douglas SE, Maier UG, McFadden GI. The secondary endosymbiont of the cryptomonad Guillardia theta contains alpha-, beta-, and gamma-tubulin genes. Molecular Biology and Evolution. 16: 1308-13. PMID 10486984 DOI: 10.1093/Oxfordjournals.Molbev.A026221 |
0.371 |
|
| 1999 |
Keeling PJ, Palmer JD, Donald RG, Roos DS, Waller RF, McFadden GI. Shikimate pathway in apicomplexan parasites. Nature. 397: 219-20. PMID 9930696 DOI: 10.1038/16618 |
0.686 |
|
| 1999 |
Keeling PJ, Poulsen N, McFadden GI. Phylogenetic diversity of parabasalian symbionts from termites, including the phylogenetic position of Pseudotrypanosoma and Trichonympha. The Journal of Eukaryotic Microbiology. 45: 643-50. PMID 9864854 DOI: 10.1111/J.1550-7408.1998.Tb04561.X |
0.453 |
|
| 1999 |
Keeling PJ, Fast NM, McFadden GI. Evolutionary relationship between translation initiation factor eIF-2gamma and selenocysteine-specific elongation factor SELB: change of function in translation factors. Journal of Molecular Evolution. 47: 649-55. PMID 9847405 DOI: 10.1007/Pl00006422 |
0.344 |
|
| 1998 |
Keeling PJ, Klenk HP, Singh RK, Schenk ME, Sensen CW, Zillig W, Doolittle WF. Sulfolobus islandicus plasmids pRN1 and pRN2 share distant but common evolutionary ancestry. Extremophiles : Life Under Extreme Conditions. 2: 391-3. PMID 9827327 DOI: 10.1007/S007920050083 |
0.67 |
|
| 1998 |
Keeling PJ, Deane JA, McFadden GI. The phylogenetic position of alpha- and beta-tubulins from the Chlorarachnion host and Cercomonas (Cercozoa). The Journal of Eukaryotic Microbiology. 45: 561-70. PMID 9783459 DOI: 10.1111/J.1550-7408.1998.Tb05117.X |
0.336 |
|
| 1998 |
Waller RF, Keeling PJ, Donald RG, Striepen B, Handman E, Lang-Unnasch N, Cowman AF, Besra GS, Roos DS, McFadden GI. Nuclear-encoded proteins target to the plastid in Toxoplasma gondii and Plasmodium falciparum. Proceedings of the National Academy of Sciences of the United States of America. 95: 12352-7. PMID 9770490 DOI: 10.1073/Pnas.95.21.12352 |
0.653 |
|
| 1998 |
Keeling PJ, McFadden GI. Origins of microsporidia Trends in Microbiology. 6: 19-23. PMID 9481819 DOI: 10.1016/S0966-842X(97)01185-2 |
0.303 |
|
| 1998 |
Keeling PJ. A kingdom's progress: Archezoa and the origin of eukaryotes Bioessays. 20: 87-95. DOI: 10.1002/(Sici)1521-1878(199801)20:1<87::Aid-Bies12>3.0.Co;2-4 |
0.411 |
|
| 1997 |
Keeling PJ, Doolittle WF. Widespread and ancient distribution of a noncanonical genetic code in diplomonads. Molecular Biology and Evolution. 14: 895-901. PMID 9287422 DOI: 10.1093/Oxfordjournals.Molbev.A025832 |
0.667 |
|
| 1997 |
Keeling PJ, Doolittle WF. Evidence that eukaryotic triosephosphate isomerase is of alpha-proteobacterial origin. Proceedings of the National Academy of Sciences of the United States of America. 94: 1270-5. PMID 9037042 DOI: 10.1073/Pnas.94.4.1270 |
0.701 |
|
| 1996 |
Keeling PJ, Doherty-Kirby AL, Teh EM, Doolittle WF. Linked genes for calmodulin and E2 ubiquitin-conjugating enzyme in Trichomonas vaginalis. The Journal of Eukaryotic Microbiology. 43: 468-74. PMID 8976604 DOI: 10.1111/J.1550-7408.1996.Tb04506.X |
0.706 |
|
| 1996 |
Keeling PJ, Doolittle WF. Alpha-tubulin from early-diverging eukaryotic lineages and the evolution of the tubulin family. Molecular Biology and Evolution. 13: 1297-305. PMID 8952074 DOI: 10.1093/Oxfordjournals.Molbev.A025576 |
0.661 |
|
| 1996 |
Keeling PJ, Doolittle WF. Methionine aminopeptidase-1: the MAP of the mitochondrion? Trends in Biochemical Sciences. 21: 285-6. PMID 8772380 DOI: 10.1016/S0968-0004(96)20017-9 |
0.57 |
|
| 1996 |
Keeling PJ, Klenk HP, Singh RK, Feeley O, Schleper C, Zillig W, Doolittle WF, Sensen CW. Complete nucleotide sequence of the Sulfolobus islandicus multicopy plasmid pRN1. Plasmid. 35: 141-4. PMID 8700967 DOI: 10.1006/Plas.1996.0016 |
0.683 |
|
| 1996 |
Keeling PJ, Doolittle WF. A non-canonical genetic code in an early diverging eukaryotic lineage. The Embo Journal. 15: 2285-90. PMID 8641293 DOI: 10.1002/J.1460-2075.1996.Tb00581.X |
0.675 |
|
| 1996 |
Keeling PJ, Baldauf SL, Doolittle WF, Zillig W, Klenk H. An infB-Homolog in Sulfolobus acidocaldarius Systematic and Applied Microbiology. 19: 312-321. DOI: 10.1016/S0723-2020(96)80057-9 |
0.756 |
|
| 1996 |
Keeling PJ, Baldauf SL, Doolittle WF, Zillig W, Klenk HP. An infB-homolog in Sulfolobus acidocaldarius Systematic and Applied Microbiology. 19: 312-321. DOI: 10.1016/S0723-2020(96)80057-9 |
0.709 |
|
| 1995 |
Keeling PJ, Roger AJ. The selfish pursuit of sex. Nature. 375: 283. PMID 7753189 DOI: 10.1038/375283A0 |
0.427 |
|
| 1995 |
Keeling PJ, Doolittle WF. Archaea: narrowing the gap between prokaryotes and eukaryotes. Proceedings of the National Academy of Sciences of the United States of America. 92: 5761-4. PMID 7597025 DOI: 10.1073/Pnas.92.13.5761 |
0.719 |
|
| 1995 |
Keeling PJ, Doolittle WF. An archaebacterial elF-1A: new grist for the mill. Molecular Microbiology. 17: 399-400. PMID 7494488 DOI: 10.1111/j.1365-2958.1995.mmi_17020399.x |
0.533 |
|
| 1995 |
Keeling PJ, Doolittle WF. Concerted evolution in protists: recent homogenization of a polyubiquitin gene in Trichomonas vaginalis. Journal of Molecular Evolution. 41: 556-62. PMID 7490769 DOI: 10.1007/Bf00175813 |
0.695 |
|
| 1994 |
Roger AJ, Keeling PJ, Doolittle WF. Introns, the broken transposons. Society of General Physiologists Series. 49: 27-37. PMID 7939900 |
0.679 |
|
| 1994 |
Keeling PJ, Charlebois RL, Doolittle WF. Archaebacterial genomes: eubacterial form and eukaryotic content. Current Opinion in Genetics & Development. 4: 816-22. PMID 7888750 DOI: 10.1016/0959-437X(94)90065-5 |
0.706 |
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