Corbin D. Jones - Publications

Affiliations: 
University of North Carolina, Chapel Hill, Chapel Hill, NC 
Area:
Evolutionary Genetics and Genomics
Website:
http://www.bio.unc.edu/faculty/cdjones/Lab/

255 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Teixeira PJPL, Colaianni NR, Law TF, Conway JM, Gilbert S, Li H, Salas-González I, Panda D, Del Risco NM, Finkel OM, Castrillo G, Mieczkowski P, Jones CD, Dangl JL. Specific modulation of the root immune system by a community of commensal bacteria. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33879573 DOI: 10.1073/pnas.2100678118  1
2021 O'Keeffe KR, Halliday FW, Jones CD, Carbone I, Mitchell CE. Parasites, niche modification, and the host microbiome: A field survey of multiple parasites. Molecular Ecology. PMID 33740826 DOI: 10.1111/mec.15892  0.01
2021 Colaianni NR, Parys K, Lee HS, Conway JM, Kim NH, Edelbacher N, Mucyn TS, Madalinski M, Law TF, Jones CD, Belkhadir Y, Dangl JL. A complex immune response to flagellin epitope variation in commensal communities. Cell Host & Microbe. PMID 33713602 DOI: 10.1016/j.chom.2021.02.006  1
2021 Parys K, Colaianni NR, Lee HS, Hohmann U, Edelbacher N, Trgovcevic A, Blahovska Z, Lee D, Mechtler A, Muhari-Portik Z, Madalinski M, Schandry N, Rodríguez-Arévalo I, Becker C, Sonnleitner E, ... ... Jones CD, et al. Signatures of antagonistic pleiotropy in a bacterial flagellin epitope. Cell Host & Microbe. PMID 33713601 DOI: 10.1016/j.chom.2021.02.008  1
2021 Wahl A, Gralinski LE, Johnson CE, Yao W, Kovarova M, Dinnon KH, Liu H, Madden VJ, Krzystek HM, De C, White KK, Gully K, Schäfer A, Zaman T, Leist SR, ... ... Jones CD, et al. SARS-CoV-2 infection is effectively treated and prevented by EIDD-2801. Nature. PMID 33561864 DOI: 10.1038/s41586-021-03312-w  0.01
2020 Finkel OM, Salas-González I, Castrillo G, Conway JM, Law TF, Teixeira PJPL, Wilson ED, Fitzpatrick CR, Jones CD, Dangl JL. A single bacterial genus maintains root growth in a complex microbiome. Nature. PMID 32999461 DOI: 10.1038/s41586-020-2778-7  1
2020 Wahl A, Gralinski L, Johnson C, Yao W, Kovarova M, Dinnon K, Liu H, Madden V, Krzystek H, De C, White K, Schäfer A, Zaman T, Leist S, Grant P, ... ... Jones C, et al. Acute SARS-CoV-2 Infection is Highly Cytopathic, Elicits a Robust Innate Immune Response and is Efficiently Prevented by EIDD-2801. Research Square. PMID 32995766 DOI: 10.21203/rs.3.rs-80404/v1  0.01
2020 Ramirez-Villacis DX, Finkel OM, Salas-González I, Fitzpatrick CR, Dangl JL, Jones CD, Leon-Reyes A. Root Microbiome Modulates Plant Growth Promotion Induced by Low Doses of Glyphosate. Msphere. 5. PMID 32817451 DOI: 10.1128/mSphere.00484-20  1
2020 Zhou S, Sizemore S, Moeser M, Zimmerman S, Samoff E, Mobley V, Frost S, Cressman A, Clark M, Skelly T, Kelkar H, Veluvolu U, Jones C, Eron J, Cohen M, et al. Near Real-Time Identification of Recent HIV Transmissions, Transmitted Drug Resistance Mutations, and Transmission Networks by MPID-NGS in North Carolina. The Journal of Infectious Diseases. PMID 32663847 DOI: 10.1093/Infdis/Jiaa417  1
2020 Gillette MA, Satpathy S, Cao S, Dhanasekaran SM, Vasaikar SV, Krug K, Petralia F, Li Y, Liang WW, Reva B, Krek A, Ji J, Song X, Liu W, Hong R, et al. Proteogenomic Characterization Reveals Therapeutic Vulnerabilities in Lung Adenocarcinoma. Cell. 182: 200-225.e35. PMID 32649874 DOI: 10.1016/J.Cell.2020.06.013  0.01
2020 Liu Y, Jones CD, Day LB, Summers K, Burmeister SS. Cognitive phenotype and differential gene expression in a hippocampal homologue in two species of frog. Integrative and Comparative Biology. PMID 32413121 DOI: 10.1093/icb/icaa032  1
2020 Dou Y, Kawaler EA, Cui Zhou D, Gritsenko MA, Huang C, Blumenberg L, Karpova A, Petyuk VA, Savage SR, Satpathy S, Liu W, Wu Y, Tsai CF, Wen B, Li Z, et al. Proteogenomic Characterization of Endometrial Carcinoma. Cell. PMID 32059776 DOI: 10.1016/J.Cell.2020.01.026  0.04
2020 . Pan-cancer analysis of whole genomes. Nature. 578: 82-93. PMID 32025007 DOI: 10.1038/S41586-020-1969-6  0.01
2020 Selitsky SR, Marron D, Hollern D, Mose LE, Hoadley KA, Jones C, Parker JS, Dittmer DP, Perou CM. Virus expression detection reveals RNA-sequencing contamination in TCGA. Bmc Genomics. 21: 79. PMID 31992194 DOI: 10.1186/S12864-020-6483-6  0.01
2020 Nixon CC, Mavigner M, Sampey GC, Brooks AD, Spagnuolo RA, Irlbeck DM, Mattingly C, Ho PT, Schoof N, Cammon CG, Tharp GK, Kanke M, Wang Z, Cleary RA, Upadhyay AA, ... ... Jones CD, et al. Systemic HIV and SIV latency reversal via non-canonical NF-κB signalling in vivo. Nature. PMID 31969707 DOI: 10.1038/S41586-020-1951-3  0.01
2020 Li W, Hannig J, Jones CD. A note on optimal sampling strategy for structural variant detection using optical mapping Communications in Statistics-Theory and Methods. 1-15. DOI: 10.1080/03610926.2020.1723638  0.01
2019 Matute DR, Comeault AA, Earley E, Serrato-Capuchina A, Peede D, Monroy-Eklund A, Huang W, Jones CD, Mackay TFC, Coyne JA. Rapid and Predictable Evolution of Admixed Populations Between Two Species Pairs. Genetics. PMID 31767631 DOI: 10.1534/Genetics.119.302685  1
2019 Finkel OM, Salas-González I, Castrillo G, Spaepen S, Law TF, Teixeira PJPL, Jones CD, Dangl JL. The effects of soil phosphorus content on plant microbiota are driven by the plant phosphate starvation response. Plos Biology. 17: e3000534. PMID 31721759 DOI: 10.1371/journal.pbio.3000534  1
2019 Seidl F, Levis NA, Jones CD, Monroy-Eklund A, Ehrenreich IM, Pfennig KS. Variation in hybrid gene expression: implications for the evolution of genetic incompatibilities in interbreeding species. Molecular Ecology. PMID 31541560 DOI: 10.1111/Mec.15246  1
2018 Melvin RG, Lamichane N, Havula E, Kokki K, Soeder C, Jones CD, Hietakangas V. Natural variation in sugar tolerance associates with changes in signaling and mitochondrial ribosome biogenesis. Elife. 7. PMID 30480548 DOI: 10.7554/Elife.40841  0.01
2018 Barish S, Nuss S, Strunilin I, Bao S, Mukherjee S, Jones CD, Volkan PC. Combinations of DIPs and Dprs control organization of olfactory receptor neuron terminals in Drosophila. Plos Genetics. 14: e1007560. PMID 30102700 DOI: 10.1371/journal.pgen.1007560  1
2018 Thorsson V, Gibbs DL, Brown SD, Wolf D, Bortone DS, Ou Yang TH, Porta-Pardo E, Gao GF, Plaisier CL, Eddy JA, Ziv E, Culhane AC, Paull EO, Sivakumar IKA, Gentles AJ, et al. The Immune Landscape of Cancer. Immunity. PMID 29628290 DOI: 10.1016/J.Immuni.2018.03.023  0.01
2018 Chiu HS, Somvanshi S, Patel E, Chen TW, Singh VP, Zorman B, Patil SL, Pan Y, Chatterjee SS, Sood AK, Gunaratne PH, Sumazin P. Pan-Cancer Analysis of lncRNA Regulation Supports Their Targeting of Cancer Genes in Each Tumor Context. Cell Reports. 23: 297-312.e12. PMID 29617668 DOI: 10.1016/J.Celrep.2018.03.064  0.01
2018 Beck M, Cox G, Jones C, Latushkin Y, McQuighan K, Sukhtayev A. Instability of pulses in gradient reaction-diffusion systems: a symplectic approach. Philosophical Transactions. Series a, Mathematical, Physical, and Engineering Sciences. 376. PMID 29507172 DOI: 10.1098/Rsta.2017.0187  0.01
2018 Herrera Paredes S, Gao T, Law TF, Finkel OM, Mucyn T, Teixeira PJPL, Salas González I, Feltcher ME, Powers MJ, Shank EA, Jones CD, Jojic V, Dangl JL, Castrillo G. Design of synthetic bacterial communities for predictable plant phenotypes. Plos Biology. 16: e2003962. PMID 29462153 DOI: 10.1371/Journal.Pbio.2003962  1
2018 Wang JR, Holt J, McMillan L, Jones CD. FMLRC: Hybrid long read error correction using an FM-index. Bmc Bioinformatics. 19: 50. PMID 29426289 DOI: 10.1186/S12859-018-2051-3  1
2018 Melvin RG, Lamichane N, Havula E, Kokki K, Soeder C, Jones CD, Hietakangas V. Author response: Natural variation in sugar tolerance associates with changes in signaling and mitochondrial ribosome biogenesis Elife. DOI: 10.7554/Elife.40841.040  0.01
2018 O'Keeffe KR, Jones CD. Challenges and solutions for analysing dual RNA‐seq data for non‐model host–pathogen systems Methods in Ecology and Evolution. 10: 401-414. DOI: 10.1111/2041-210X.13135  1
2017 . Comprehensive and Integrated Genomic Characterization of Adult Soft Tissue Sarcomas. Cell. 171: 950-965.e28. PMID 29100075 DOI: 10.1016/J.Cell.2017.10.014  0.01
2017 Poe JC, Jia W, Su H, Anand S, Rose JJ, Tata PV, Suthers AN, Jones CD, Kuan PF, Vincent BG, Serody JS, Horwitz ME, Ho VT, Pavletic SZ, Hakim FT, et al. An aberrant NOTCH2-BCR signaling axis in B cells from patients with chronic GVHD. Blood. PMID 28851699 DOI: 10.1182/Blood-2017-05-782466  0.01
2017 Wern Pan J, Li Q, Barish S, Okuwa S, Zhao S, Soeder C, Kanke M, Jones CD, Volkan PC. Patterns of transcriptional parallelism and variation in the developing olfactory system of Drosophila species. Scientific Reports. 7: 8804. PMID 28821769 DOI: 10.1038/s41598-017-08563-0  1
2017 . Integrated Genomic Characterization of Pancreatic Ductal Adenocarcinoma. Cancer Cell. 32: 185-203.e13. PMID 28810144 DOI: 10.1016/J.Ccell.2017.07.007  0.01
2017 Farshidfar F, Zheng S, Gingras MC, Newton Y, Shih J, Robertson AG, Hinoue T, Hoadley KA, Gibb EA, Roszik J, Covington KR, Wu CC, Shinbrot E, Stransky N, Hegde A, et al. Integrative Genomic Analysis of Cholangiocarcinoma Identifies Distinct IDH-Mutant Molecular Profiles. Cell Reports. 19: 2878-2880. PMID 28658632 DOI: 10.1016/J.Celrep.2017.06.008  0.01
2017 Pan JW, McLaughlin J, Yang H, Leo C, Rambarat P, Okuwa S, Monroy-Eklund A, Clark S, Jones CD, Volkan PC. Comparative analysis of behavioral and transcriptional variation underlying CO2 sensory neuron function and development in Drosophila. Fly. 0. PMID 28644712 DOI: 10.1080/19336934.2017.1344374  1
2017 . Comprehensive and Integrative Genomic Characterization of Hepatocellular Carcinoma. Cell. 169: 1327-1341.e23. PMID 28622513 DOI: 10.1016/J.Cell.2017.05.046  0.01
2017 Sze SH, Pimsler ML, Tomberlin JK, Jones CD, Tarone AM. A scalable and memory-efficient algorithm for de novo transcriptome assembly of non-model organisms. Bmc Genomics. 18: 387. PMID 28589866 DOI: 10.1186/S12864-017-3735-1  0.01
2017 O'Keeffe KR, Carbone I, Jones CD, Mitchell CE. Plastic potential: how the phenotypes and adaptations of pathogens are influenced by microbial interactions within plants. Current Opinion in Plant Biology. 38: 78-83. PMID 28505582 DOI: 10.1016/J.Pbi.2017.04.014  1
2017 Walsh DM, McCullough SD, Yourstone S, Jones SW, Cairns BA, Jones CD, Jaspers I, Diaz-Sanchez D. Alterations in airway microbiota in patients with PaO2/FiO2 ratio ≤ 300 after burn and inhalation injury. Plos One. 12: e0173848. PMID 28358811 DOI: 10.1371/Journal.Pone.0173848  1
2017 Castrillo G, Teixeira PJ, Paredes SH, Law TF, de Lorenzo L, Feltcher ME, Finkel OM, Breakfield NW, Mieczkowski P, Jones CD, Paz-Ares J, Dangl JL. Root microbiota drive direct integration of phosphate stress and immunity. Nature. PMID 28297714 DOI: 10.1038/Nature21417  1
2017 . Integrated genomic and molecular characterization of cervical cancer. Nature. PMID 28112728 DOI: 10.1038/nature21386  0.01
2017 Barish S, Li Q, Pan JW, Soeder C, Jones C, Volkan PC. Transcriptional profiling of olfactory system development identifies distal antenna as a regulator of subset of neuronal fates. Scientific Reports. 7: 40873. PMID 28102318 DOI: 10.1038/srep40873  1
2017 Zhang C, Lu X, Zhu Z, Hu Y, Singh D, Jones C, Liu J, Prins JF, Liu Y. REC: fast sparse regression-based multicategory classification Statistics and Its Interface. 10: 175-185. DOI: 10.4310/Sii.2017.V10.N2.A2  0.01
2017 Wang J, Paredes S, Yourstone S, Furey T, Sheikh S, Dangl J, Jones C. P-310 YI Characterizing Gut Metagenome Variation with Host Contamination Using Nanopore Sequencing Inflammatory Bowel Diseases. 23. DOI: 10.1097/01.Mib.0000512851.06959.15  1
2016 Welch JD, Williams LA, DiSalvo M, Brandt AT, Marayati R, Sims CE, Allbritton NL, Prins JF, Yeh JJ, Jones CD. Selective single cell isolation for genomics using microraft arrays. Nucleic Acids Research. PMID 27530426 DOI: 10.1093/Nar/Gkw700  1
2016 Li Q, Barish S, Okuwa S, Maciejewski A, Brandt AT, Reinhold D, Jones CD, Volkan PC. A Functionally Conserved Gene Regulatory Network Module Governing Olfactory Neuron Diversity. Plos Genetics. 12: e1005780. PMID 26765103 DOI: 10.1371/Journal.Pgen.1005780  1
2016 Smith P, Davis SJ, Creutzig F, Fuss S, Minx J, Gabrielle B, Kato E, Jackson RB, Cowie A, Kriegler E, Van Vuuren DP, Rogelj J, Ciais P, Milne J, Canadell JG, ... ... Jones CD, et al. Biophysical and economic limits to negative CO2 emissions Nature Climate Change. 6: 42-50. DOI: 10.1038/Nclimate2870  1
2015 Masuho I, Ostrovskaya O, Kramer GM, Jones CD, Xie K, Martemyanov KA. Distinct profiles of functional discrimination among G proteins determine the actions of G protein-coupled receptors. Science Signaling. 8: ra123. PMID 26628681 DOI: 10.1126/Scisignal.Aab4068  1
2015 Boothby TC, Tenlen JR, Smith FW, Wang JR, Patanella KA, Osborne Nishimura E, Tintori SC, Li Q, Jones CD, Yandell M, Messina DN, Glasscock J, Goldstein B. Evidence for extensive horizontal gene transfer from the draft genome of a tardigrade. Proceedings of the National Academy of Sciences of the United States of America. PMID 26598659 DOI: 10.1073/Pnas.1510461112  1
2015 Hooper AE, Kennedy SR, Jones CD, Steed JW. Gelation by supramolecular dimerization of mono(urea)s. Chemical Communications (Cambridge, England). PMID 26540132 DOI: 10.1039/C5Cc06995E  1
2015 Linehan WM, Spellman PT, Ricketts CJ, Creighton CJ, Fei SS, Davis C, Wheeler DA, Murray BA, Schmidt L, Vocke CD, Peto M, Al Mamun AA, Shinbrot E, Sethi A, Brooks S, ... ... Jones CD, et al. Comprehensive Molecular Characterization of Papillary Renal-Cell Carcinoma. The New England Journal of Medicine. PMID 26536169 DOI: 10.1056/Nejmoa1505917  0.01
2015 Jones CD, Scott SJ, Anoff DL, Pierce RG, Glasheen JJ. Changes in Payer Mix and Physician Reimbursement After the Affordable Care Act and Medicaid Expansion. Inquiry : a Journal of Medical Care Organization, Provision and Financing. 52. PMID 26310500 DOI: 10.1177/0046958015602464  1
2015 Gasser T, Guivarch C, Tachiiri K, Jones CD, Ciais P. Negative emissions physically needed to keep global warming below 2 °C. Nature Communications. 6: 7958. PMID 26237242 DOI: 10.1038/ncomms8958  1
2015 Jones CD, Guiot L, Samy M, Gorman M, Tehrani H. The Use of Chemotherapeutics for the Treatment of Keloid Scars. Dermatology Reports. 7: 5880. PMID 26236447 DOI: 10.4081/dr.2015.5880  0.01
2015 Lebeis SL, Paredes SH, Lundberg DS, Breakfield N, Gehring J, McDonald M, Malfatti S, Glavina Del Rio T, Jones CD, Tringe SG, Dangl JL. Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa. Science (New York, N.Y.). PMID 26184915 DOI: 10.1126/Science.Aaa8764  1
2015 Anderson ME, Glasheen JJ, Anoff D, Pierce R, Capp R, Jones CD. Understanding predictors of prolonged hospitalizations among general medicine patients: A guide and preliminary analysis. Journal of Hospital Medicine. PMID 26126812 DOI: 10.1002/jhm.2414  1
2015 Black JL, Harrell JC, Leisner TM, Fellmeth MJ, George SD, Reinhold D, Baker NM, Jones CD, Der CJ, Perou CM, Parise LV. CIB1 depletion impairs cell survival and tumor growth in triple-negative breast cancer. Breast Cancer Research and Treatment. PMID 26105795 DOI: 10.1007/S10549-015-3458-4  1
2015 Jones CD, Ginde AA, Burke RE, Wald HL, Masoudi FA, Boxer RS. Increasing Home Healthcare Referrals upon Discharge from U.S. Hospitals: 2001-2012. Journal of the American Geriatrics Society. 63: 1265-6. PMID 26096410 DOI: 10.1111/jgs.13467  1
2015 Zhou S, Jones C, Mieczkowski P, Swanstrom R. Primer ID Validates Template Sampling Depth and Greatly Reduces the Error Rate of Next-Generation Sequencing of HIV-1 Genomic RNA Populations. Journal of Virology. 89: 8540-55. PMID 26041299 DOI: 10.1128/Jvi.00522-15  1
2015 Ward RA, Colclough N, Challinor M, Debreczeni JE, Eckersley K, Fairley G, Feron L, Flemington V, Graham MA, Greenwood R, Hopcroft P, Howard TD, James M, Jones CD, Jones CR, et al. Structure-Guided Design of Highly Selective and Potent Covalent Inhibitors of ERK1/2. Journal of Medicinal Chemistry. 58: 4790-801. PMID 25977981 DOI: 10.1021/acs.jmedchem.5b00466  1
2015 Dworkin I, Jones CD. Evolutionary genetics: you are what you evolve to eat. Current Biology : Cb. 25: R341-4. PMID 25898107 DOI: 10.1016/j.cub.2015.01.044  1
2015 Evans DC, Wojda TR, Jones CD, Otey AJ, Stawicki SP. Intentional ingestions of foreign objects among prisoners: A review. World Journal of Gastrointestinal Endoscopy. 7: 162-8. PMID 25789086 DOI: 10.4253/wjge.v7.i3.162  0.01
2015 Jones CD, Glasheen JJ. Handoffs: a story in evolution. Journal of Hospital Medicine. 10: 202-3. PMID 25736615 DOI: 10.1002/jhm.2316  1
2015 . Comprehensive genomic characterization of head and neck squamous cell carcinomas. Nature. 517: 576-82. PMID 25631445 DOI: 10.1038/Nature14129  1
2015 Justiniano CF, Coffey RA, Evans DC, Jones LM, Jones CD, Bailey JK, Miller SF, Stawicki SP. Comorbidity-polypharmacy score predicts in-hospital complications and the need for discharge to extended care facility in older burn patients. Journal of Burn Care & Research : Official Publication of the American Burn Association. 36: 193-6. PMID 25559732 DOI: 10.1097/BCR.0000000000000094  1
2015 Jones CD, Vu MB, O'Donnell CM, Anderson ME, Patel S, Wald HL, Coleman EA, DeWalt DA. A failure to communicate: a qualitative exploration of care coordination between hospitalists and primary care providers around patient hospitalizations. Journal of General Internal Medicine. 30: 417-24. PMID 25316586 DOI: 10.1007/S11606-014-3056-X  1
2015 Cené CW, Haymore LB, Lin FC, Laux J, Jones CD, Wu JR, DeWalt D, Pignone M, Corbie-Smith G. Family member accompaniment to routine medical visits is associated with better self-care in heart failure patients. Chronic Illness. 11: 21-32. PMID 24740555 DOI: 10.1177/1742395314532142  1
2015 Cannella AA, Jones CD, Withers MC. Family-versus lone-founder-controlled public corporations: Social identity theory and boards of directors Academy of Management Journal. 58: 436-459. DOI: 10.5465/Amj.2012.0045  1
2015 Koven CD, Chambers JQ, Georgiou K, Knox R, Negron-Juarez R, Riley WJ, Arora VK, Brovkin V, Friedlingstein P, Jones CD. Controls on terrestrial carbon feedbacks by productivity versus turnover in the CMIP5 Earth System Models Biogeosciences. 12: 5211-5228. DOI: 10.5194/Bg-12-5211-2015  1
2015 Halloran PR, Booth BBB, Jones CD, Lambert FH, McNeall DJ, Totterdell IJ, Völker C. The mechanisms of North Atlantic CO2 uptake in a large Earth System Model ensemble Biogeosciences. 12: 4497-4508. DOI: 10.5194/bg-12-4497-2015  1
2015 Jones CD, Guiot L, Samy M, Gorman M, Tehrani H. The use of chemotherapeutics for the treatment of keloid scars Dermatology Reports. 7: 15-19. DOI: 10.4081/dr.2015.5880  1
2015 Jones CD, Li M, Cannella AA. Responses to a Governance Mandate: The Adoption of Governance Committees by NYSE Firms Journal of Management. 41: 1873-1897. DOI: 10.1177/0149206313484515  1
2015 Carmeli A, Jones CD, Binyamin G. The power of caring and generativity in building strategic adaptability Journal of Occupational and Organizational Psychology. DOI: 10.1111/joop.12106  1
2015 Wang JR, Jones CD. Fast alignment filtering of nanopore sequencing reads using locality-sensitive hashing Proceedings - 2015 Ieee International Conference On Bioinformatics and Biomedicine, Bibm 2015. 127-130. DOI: 10.1109/BIBM.2015.7359668  1
2015 Sexton-Kennedy E, Gartung P, Jones CD, Lange D. Implementation of a multi-threaded framework for large- scale scientific applications Journal of Physics: Conference Series. 608. DOI: 10.1088/1742-6596/608/1/012034  1
2015 Lund MN, Handberg R, Davies GR, Chaplin WJ, Jones CD. K2P2 - A PHOTOMETRY PIPELINE for the K2 MISSION Astrophysical Journal. 806. DOI: 10.1088/0004-637X/806/1/30  1
2015 Jones CDO. Effects of writing instruction on kindergarten students' writing achievement: An experimental study Journal of Educational Research. 108: 35-44. DOI: 10.1080/00220671.2013.836466  0.01
2015 Cayuela A, Kennedy SR, Soriano ML, Jones CD, Valcárcel M, Steed JW. Fluorescent carbon dot-molecular salt hydrogels Chemical Science. 6: 6139-6146. DOI: 10.1039/c5sc01859e  1
2015 Asseng S, Ewert F, Martre P, Rötter RP, Lobell DB, Cammarano D, Kimball BA, Ottman MJ, Wall GW, White JW, Reynolds MP, Alderman PD, Prasad PVV, Aggarwal PK, Anothai J, ... ... Jones CD, et al. Rising temperatures reduce global wheat production Nature Climate Change. 5: 143-147. DOI: 10.1038/Nclimate2470  1
2015 Debaillie AC, Jones CD, Magnus NA, Mateos C, Torrado A, Wepsiec JP, Tokala R, Raje P. Synthesis of an ORL-1 Receptor Antagonist via a Radical Bromination and Deoxyfluorination to Afford a gem-Difluorospirocycle Organic Process Research and Development. 19: 1568-1575. DOI: 10.1021/op5000094  1
2015 Dawn A, Andrew KS, Yufit DS, Hong Y, Reddy JP, Jones CD, Aguilar JA, Steed JW. Supramolecular Gel Control of Cisplatin Crystallization: Identification of a New Solvate Form Using a Cisplatin-Mimetic Gelator Crystal Growth and Design. 15: 4591-4599. DOI: 10.1021/Acs.Cgd.5B00840  1
2015 La Mesa M, Catalano B, Jones CD. Early life history traits of Trematomus scotti in the Bransfield Strait Antarctic Science. DOI: 10.1017/S0954102015000280  1
2015 Abeshouse A, Ahn J, Akbani R, Ally A, Amin S, Andry CD, Annala M, Aprikian A, Armenia J, Arora A, Auman JT, Balasundaram M, Balu S, Barbieri CE, Bauer T, et al. The Molecular Taxonomy of Primary Prostate Cancer Cell. 163: 1011-1025. DOI: 10.1016/j.cell.2015.10.025  0.01
2015 Akbani R, Akdemir KC, Aksoy BA, Albert M, Ally A, Amin SB, Arachchi H, Arora A, Auman JT, Ayala B, Baboud J, Balasundaram M, Balu S, Barnabas N, Bartlett J, et al. Genomic Classification of Cutaneous Melanoma Cell. 161: 1681-1696. DOI: 10.1016/j.cell.2015.05.044  0.01
2015 Dornburg A, Eytan RI, Federman S, Pennington JN, Stewart AL, Jones CD, Near TJ. Molecular data support the existence of two species of the Antarctic fish genus Cryodraco (Channichthyidae) Polar Biology. 1-11. DOI: 10.1007/S00300-015-1859-9  1
2015 Riginella E, Mazzoldi C, Ashford J, Jones CD, Morgan C, la Mesa M. Life history strategies of the Scotia Sea icefish, Chaenocephalus aceratus, along the Southern Scotia Ridge Polar Biology. DOI: 10.1007/s00300-015-1802-0  1
2015 Davies-Barnard T, Valdes PJ, Singarayer JS, Wiltshire AJ, Jones CD. Quantifying the relative importance of land cover change from climate and land use in the representative concentration pathways Global Biogeochemical Cycles. DOI: 10.1002/2014GB004949  1
2014 Jones CH, Ball H. Exploring Socioeconomic Differences in Bedtime Behaviours and Sleep Duration in English Preschool Children. Infant and Child Development. 23: 518-531. PMID 25598710 DOI: 10.1002/icd.1848  1
2014 Miller CN, Steele SP, Brunton JC, Jenkins RJ, LoVullo ED, Taft-Benz SA, Romanchuk A, Jones CD, Dotson GD, Collins EJ, Kawula TH. Extragenic suppressor mutations in ΔripA disrupt stability and function of LpxA. Bmc Microbiology. 14: 336. PMID 25551578 DOI: 10.1186/S12866-014-0336-X  1
2014 . Integrated genomic characterization of papillary thyroid carcinoma. Cell. 159: 676-90. PMID 25417114 DOI: 10.1016/J.Cell.2014.09.050  1
2014 James IA, Moukalled A, Yu E, Tulman DB, Bergese SD, Jones CD, Stawicki SP, Evans DC. A systematic review of the need for MRI for the clearance of cervical spine injury in obtunded blunt trauma patients after normal cervical spine CT. Journal of Emergencies, Trauma, and Shock. 7: 251-5. PMID 25400384 DOI: 10.4103/0974-2700.142611  1
2014 Arrazola RA, Neff LJ, Kennedy SM, Holder-Hayes E, Jones CD. Tobacco use among middle and high school students--United States, 2013. Mmwr. Morbidity and Mortality Weekly Report. 63: 1021-6. PMID 25393220  1
2014 Cahill LS, Laliberté CL, Liu XJ, Bishop J, Nieman BJ, Mogil JS, Sorge RE, Jones CD, Salter MW, Henkelman RM. Quantifying blood-spinal cord barrier permeability after peripheral nerve injury in the living mouse. Molecular Pain. 10: 60. PMID 25216623 DOI: 10.1186/1744-8069-10-60  1
2014 James SJ, Perrin A, Jones CD, Yufit DS, Steed JW. Highly interlocked anion-bridged supramolecular networks from interrupted imidazole-urea gels. Chemical Communications (Cambridge, England). 50: 12851-4. PMID 25209842 DOI: 10.1039/C4Cc05789A  1
2014 Yourstone SM, Lundberg DS, Dangl JL, Jones CD. MT-Toolbox: improved amplicon sequencing using molecule tags. Bmc Bioinformatics. 15: 284. PMID 25149069 DOI: 10.1186/1471-2105-15-284  1
2014 Beesu M, Malladi SS, Fox LM, Jones CD, Dixit A, David SA. Human Toll-like receptor 8-selective agonistic activities in 1-alkyl-1H-benzimidazol-2-amines. Journal of Medicinal Chemistry. 57: 7325-41. PMID 25102141 DOI: 10.1021/Jm500701Q  1
2014 Jabara CB, Hu F, Mollan KR, Williford SE, Menezes P, Yang Y, Eron JJ, Fried MW, Hudgens MG, Jones CD, Swanstrom R, Lemon SM. Hepatitis C Virus (HCV) NS3 sequence diversity and antiviral resistance-associated variant frequency in HCV/HIV coinfection. Antimicrobial Agents and Chemotherapy. 58: 6079-92. PMID 25092699 DOI: 10.1128/Aac.03466-14  1
2014 Burke RE, Jones CD, Levy C, Ginde AA. Electronic communication capabilities of residential care facilities at times of transition. Journal of the American Geriatrics Society. 62: 1381-3. PMID 25039508 DOI: 10.1111/Jgs.12905  1
2014 Thaden JT, Lewis SS, Hazen KC, Huslage K, Fowler VG, Moehring RW, Chen LF, Jones CD, Moore ZS, Sexton DJ, Anderson DJ. Rising rates of carbapenem-resistant enterobacteriaceae in community hospitals: a mixed-methods review of epidemiology and microbiology practices in a network of community hospitals in the southeastern United States. Infection Control and Hospital Epidemiology. 35: 978-83. PMID 25026612 DOI: 10.1086/677157  1
2014 Feltner C, Jones CD, Cené CW, Zheng ZJ, Sueta CA, Coker-Schwimmer EJ, Arvanitis M, Lohr KN, Middleton JC, Jonas DE. Transitional care interventions to prevent readmissions for persons with heart failure: a systematic review and meta-analysis. Annals of Internal Medicine. 160: 774-84. PMID 24862840 DOI: 10.7326/M14-0083  1
2014 Sweeney RT, McClary AC, Myers BR, Biscocho J, Neahring L, Kwei KA, Qu K, Gong X, Ng T, Jones CD, Varma S, Odegaard JI, Sugiyama T, Koyota S, Rubin BP, et al. Identification of recurrent SMO and BRAF mutations in ameloblastomas. Nature Genetics. 46: 722-5. PMID 24859340 DOI: 10.1038/Ng.2986  1
2014 Romanchuk A, Jones CD, Karkare K, Moore A, Smith BA, Jones C, Dougherty K, Baltrus DA. Bigger is not always better: transmission and fitness burden of ∼1MB Pseudomonas syringae megaplasmid pMPPla107. Plasmid. 73: 16-25. PMID 24792221 DOI: 10.1016/J.Plasmid.2014.04.002  1
2014 Cavanaugh JJ, Jones CD, Embree G, Tsai K, Miller T, Shilliday BB, McGuirt B, Roche R, Pignone M, DeWalt DA, Ratner S. Implementation Science Workshop: primary care-based multidisciplinary readmission prevention program. Journal of General Internal Medicine. 29: 798-804. PMID 24687289 DOI: 10.1007/S11606-014-2819-8  1
2014 Bartoli C, Berge O, Monteil CL, Guilbaud C, Balestra GM, Varvaro L, Jones C, Dangl JL, Baltrus DA, Sands DC, Morris CE. The Pseudomonas viridiflava phylogroups in the P. syringae species complex are characterized by genetic variability and phenotypic plasticity of pathogenicity-related traits. Environmental Microbiology. 16: 2301-15. PMID 24612372 DOI: 10.1111/1462-2920.12433  1
2014 Reinhardt JA, Kolaczkowski B, Jones CD, Begun DJ, Kern AD. Parallel geographic variation in Drosophila melanogaster. Genetics. 197: 361-73. PMID 24610860 DOI: 10.1534/Genetics.114.161463  1
2014 Jones CD, Holmes GM, DeWalt DA, Erman B, Wu JR, Cene CW, Baker DW, Schillinger D, Ruo B, Bibbins-Domingo K, Macabasco-O'Connell A, Hawk V, Broucksou K, Pignone M. Self-reported recall and daily diary-recorded measures of weight monitoring adherence: associations with heart failure-related hospitalization. Bmc Cardiovascular Disorders. 14: 12. PMID 24483776 DOI: 10.1186/1471-2261-14-12  1
2014 Weinstein JN, Akbani R, Broom BM, Wang W, Verhaak RGW, McConkey D, Lerner S, Morgan M, Creighton CJ, Smith C, Cherniack AD, Kim J, Pedamallu CS, Noble MS, Al-Ahmadie HA, et al. Comprehensive molecular characterization of urothelial bladder carcinoma Nature. 507: 315-322. PMID 24476821 DOI: 10.1038/Nature12965  0.01
2014 Baltrus DA, Yourstone S, Lind A, Guilbaud C, Sands DC, Jones CD, Morris CE, Dangl JL. Draft Genome Sequences of a Phylogenetically Diverse Suite of Pseudomonas syringae Strains from Multiple Source Populations. Genome Announcements. 2. PMID 24459267 DOI: 10.1128/Genomea.01195-13  1
2014 Zhao L, Saelao P, Jones CD, Begun DJ. Origin and spread of de novo genes in Drosophila melanogaster populations. Science (New York, N.Y.). 343: 769-72. PMID 24457212 DOI: 10.1126/Science.1248286  1
2014 Mucyn TS, Yourstone S, Lind AL, Biswas S, Nishimura MT, Baltrus DA, Cumbie JS, Chang JH, Jones CD, Dangl JL, Grant SR. Variable suites of non-effector genes are co-regulated in the type III secretion virulence regulon across the Pseudomonas syringae phylogeny. Plos Pathogens. 10: e1003807. PMID 24391493 DOI: 10.1371/Journal.Ppat.1003807  1
2014 Wu JR, DeWalt DA, Baker DW, Schillinger D, Ruo B, Bibbins-Domingo K, Macabasco-O'Connell A, Holmes GM, Broucksou KA, Erman B, Hawk V, Cene CW, Jones CD, Pignone M. A single-item self-report medication adherence question predicts hospitalisation and death in patients with heart failure. Journal of Clinical Nursing. 23: 2554-64. PMID 24355060 DOI: 10.1111/Jocn.12471  1
2014 Guo X, Zheng S, Dang H, Pace RG, Stonebraker JR, Jones CD, Boellmann F, Yuan G, Haridass P, Fedrigo O, Corcoran DL, Seibold MA, Ranade SS, Knowles MR, O'Neal WK, et al. Genome reference and sequence variation in the large repetitive central exon of human MUC5AC. American Journal of Respiratory Cell and Molecular Biology. 50: 223-32. PMID 24010879 DOI: 10.1165/Rcmb.2013-0235Oc  1
2014 MacKenzie JF, Grimshaw PN, Jones CD, Thoirs K, Petkov J. Muscle activity during lifting: examining the effect of core conditioning of multifidus and transversus abdominis. Work (Reading, Mass.). 47: 453-62. PMID 24004762 DOI: 10.3233/WOR-131706  0.01
2014 Jones CH, Pollard TM, Summerbell CD, Ball H. Could parental rules play a role in the association between short sleep and obesity in young children? Journal of Biosocial Science. 46: 405-18. PMID 23750569 DOI: 10.1017/S0021932013000291  1
2014 Jones CD, Cox JA, Cooper RJ. Bachman's sparrow (peucaea aestivalis) response to variation in the extent of burns conducted during the nesting season | Réaction du bruant des pinèdes (peucaea aestivalis) aux variations de l'étendue des brûlis effectués durant la saison de nidification Avian Conservation and Ecology. 9. DOI: 10.5751/Ace-00632-090103  1
2014 Brasso RL, Lang J, Jones CD, Polito MJ. Ontogenetic niche expansion influences mercury exposure in the Antarctic silverfish Pleuragramma antarcticum Marine Ecology Progress Series. 504: 253-263. DOI: 10.3354/Meps10738  1
2014 Cox JA, Jones CD, Tucker JW, Budney GF. An unusual song-like vocalization produced by female Bachman's Sparrows (Peucaea aestivalis) Southeastern Naturalist. 13: N9-N12. DOI: 10.1656/058.013.0206  1
2014 Lehmicke AJJ, Jones CD. First confirmed records of parasitism of seaside sparrow nests by brown-headed cowbirds Southeastern Naturalist. 13: N1-N5. DOI: 10.1656/058.013.0109  1
2014 Jones CD, Morgan KT, Porter CH, Wu JZ, Fraisse CW, Zotarelli L. Addition of a two-dimensional water balance model to the DSSAT-CSM Transactions of the Asabe. 57: 1643-1656. DOI: 10.13031/trans.57.10629  1
2014 Khanna P, Jones CD, Boivie S. Director Human Capital, Information Processing Demands, and Board Effectiveness Journal of Management. 40: 557-585. DOI: 10.1177/0149206313515523  1
2014 Schwinger J, Tjiputra JF, Heinze C, Bopp L, Christian JR, Gehlen M, Ilyina T, Jones CD, Salas-Mélia D, Segschneider J, Séférian R, Totterdell I. Nonlinearity of ocean carbon cycle feedbacks in CMIP5 earth system models Journal of Climate. 27: 3869-3888. DOI: 10.1175/JCLI-D-13-00452.1  1
2014 Davies-Barnard T, Valdes PJ, Singarayer JS, Jones CD. Climatic impacts of land-use change due to crop yield increases and a universal carbon tax from a scenario model Journal of Climate. 27: 1413-1424. DOI: 10.1175/JCLI-D-13-00154.s1  1
2014 Friedlingstein P, Meinshausen M, Arora VK, Jones CD, Anav A, Liddicoat SK, Knutti R. Uncertainties in CMIP5 climate projections due to carbon cycle feedbacks Journal of Climate. 27: 511-526. DOI: 10.1175/JCLI-D-12-00579.1  1
2014 Clarke RT, Jones CHD, Mitchell CD, Thompson MJ. 'Shouting from the roof tops': A qualitative study of how children with leukaemia are diagnosed in primary care Bmj Open. 4. DOI: 10.1136/bmjopen-2013-004640  0.01
2014 Jones CHD, Neill S, Lakhanpaul M, Roland D, Singlehurst-Mooney H, Thompson M. Information needs of parents for acute childhood illness: Determining 'what, how, where and when' of safety netting using a qualitative exploration with parents and clinicians Bmj Open. 4. DOI: 10.1136/bmjopen-2013-003874  0.01
2014 Davies-Barnard T, Valdes PJ, Singarayer JS, Pacifico FM, Jones CD. Full effects of land use change in the representative concentration pathways Environmental Research Letters. 9. DOI: 10.1088/1748-9326/9/11/114014  1
2014 Abdurachmanov D, Arya K, Bendavid J, Boccali T, Cooperman G, Dotti A, Elmer P, Eulisse G, Giacomini F, Jones CD, Manzali M, Muzaffar S. Explorations of the viability of ARM and Xeon Phi for physics processing Journal of Physics: Conference Series. 513. DOI: 10.1088/1742-6596/513/5/052008  1
2014 Jones CD, Sexton-Kennedy E. Stitched together: Transitioning CMS to a hierarchical threaded framework Journal of Physics: Conference Series. 513. DOI: 10.1088/1742-6596/513/2/022034  1
2014 Osborne I, Brownson E, Eulisse G, Jones CD, Lange DJ, Sexton-Kennedy E. CMS geometry through 2020 Journal of Physics: Conference Series. 513. DOI: 10.1088/1742-6596/513/2/022026  1
2014 Reutzel DR, Brandt L, Fawson PC, Jones CD. Exploration of the consortium on reading excellence phonics survey: An instrument for assessing primary-grade students' phonics knowledge Elementary School Journal. 115: 49-72. DOI: 10.1086/676946  1
2014 Jones CD, Reutzel DR. Write to Read: Investigating the Reading-Writing Relationship of Code-Level Early Literacy Skills Reading and Writing Quarterly. DOI: 10.1080/10573569.2013.850461  1
2014 Fuss S, Canadell JG, Peters GP, Tavoni M, Andrew RM, Ciais P, Jackson RB, Jones CD, Kraxner F, Nakicenovic N, Le Quéré C, Raupach MR, Sharifi A, Smith P, Yamagata Y. COMMENTARY: Betting on negative emissions Nature Climate Change. 4: 850-853. DOI: 10.1038/nclimate2392  1
2014 Coronado VG, McGuire LC, Sarmiento K, Bell J, Lionbarger MR, Jones CD, Geller AI, Khoury N, Xu L. Corrigendum to "Trends in Traumatic Brain Injury in the U.S. and the public health response: 1995-2009 {star, open}" [J. Saf. Res. 43 (2012) 299-307] (DOI:10.1016/j.jsr.2012.08.011) Journal of Safety Research. DOI: 10.1016/j.jsr.2013.12.006  1
2014 Davies-Barnard T, Valdes PJ, Jones CD, Singarayer JS. Sensitivity of a coupled climate model to canopy interception capacity Climate Dynamics. 42: 1715-1732. DOI: 10.1007/s00382-014-2100-1  1
2014 Hoffman FM, Randerson JT, Arora VK, Bao Q, Cadule P, Ji D, Jones CD, Kawamiya M, Khatiwala S, Lindsay K, Obata A, Shevliakova E, Six KD, Tjiputra JF, Volodin EM, et al. Causes and implications of persistent atmospheric carbon dioxide biases in Earth System Models Journal of Geophysical Research: Biogeosciences. 119: 141-162. DOI: 10.1002/2013Jg002381  1
2013 Basner JE, Theisz KI, Jensen US, Jones CD, Ponomarev I, Sulima P, Jo K, Eljanne M, Espey MG, Franca-Koh J, Hanlon SE, Kuhn NZ, Nagahara LA, Schnell JD, Moore NM. Measuring the evolution and output of cross-disciplinary collaborations within the NCI Physical Sciences-Oncology Centers Network. Research Evaluation. 22: 285-297. PMID 24808632 DOI: 10.1093/Reseval/Rvt025  1
2013 Jones CD, Holmes GM, Lewis SE, Thompson KW, Cykert S, DeWalt DA. Satisfaction with electronic health records is associated with job satisfaction among primary care physicians. Informatics in Primary Care. 21: 18-20. PMID 24629652 DOI: 10.14236/Jhi.V21I1.27  1
2013 Graham MA, Bethel PA, Burgess J, Fairley G, Glossop SC, Greenwood RD, Jones CD, Lovell S, Swallow S. Novel and versatile synthesis of disubstituted 1,2-dihydro-1,2,4-triazol-3-ones. Organic Letters. 15: 6078-81. PMID 24246051 DOI: 10.1021/ol402920z  1
2013 Reinhardt JA, Jones CD. Two rapidly evolving genes contribute to male fitness in Drosophila. Journal of Molecular Evolution. 77: 246-59. PMID 24221639 DOI: 10.1007/S00239-013-9594-8  1
2013 Reinhardt JA, Wanjiru BM, Brant AT, Saelao P, Begun DJ, Jones CD. De novo ORFs in Drosophila are important to organismal fitness and evolved rapidly from previously non-coding sequences. Plos Genetics. 9: e1003860. PMID 24146629 DOI: 10.1371/Journal.Pgen.1003860  1
2013 Hungate EA, Earley EJ, Boussy IA, Turissini DA, Ting CT, Moran JR, Wu ML, Wu CI, Jones CD. A locus in Drosophila sechellia affecting tolerance of a host plant toxin. Genetics. 195: 1063-75. PMID 24037270 DOI: 10.1534/Genetics.113.154773  1
2013 Lundberg DS, Yourstone S, Mieczkowski P, Jones CD, Dangl JL. Practical innovations for high-throughput amplicon sequencing. Nature Methods. 10: 999-1002. PMID 23995388 DOI: 10.1038/Nmeth.2634  1
2013 Ligon LS, Rigel NW, Romanchuk A, Jones CD, Braunstein M. Suppressor analysis reveals a role for SecY in the SecA2-dependent protein export pathway of Mycobacteria. Journal of Bacteriology. 195: 4456-65. PMID 23913320 DOI: 10.1128/Jb.00630-13  1
2013 Paz-Soldán VA, Alban RE, Jones CD, Oberhelman RA. The provision of and need for social support among adult and pediatric patients with tuberculosis in Lima, Peru: a qualitative study. Bmc Health Services Research. 13: 290. PMID 23899353 DOI: 10.1186/1472-6963-13-290  1
2013 Merker JD, Roskin KM, Ng D, Pan C, Fisk DG, King JJ, Hoh R, Stadler M, Okumoto LM, Abidi P, Hewitt R, Jones CD, Gojenola L, Clark MJ, Zhang B, et al. Comprehensive whole-genome sequencing of an early-stage primary myelofibrosis patient defines low mutational burden and non-recurrent candidate genes. Haematologica. 98: 1689-96. PMID 23872309 DOI: 10.3324/Haematol.2013.092379  1
2013 Roche JJ, Jones CD, Khan RJ, Yates PJ. The surgical anatomy of the piriformis tendon, with particular reference to total hip replacement: a cadaver study. The Bone & Joint Journal. 95: 764-9. PMID 23723269 DOI: 10.1302/0301-620X.95B6.30727  1
2013 Roth AE, Jones CD, Durian DJ. Bubble statistics and coarsening dynamics for quasi-two-dimensional foams with increasing liquid content. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 87: 042304. PMID 23679411 DOI: 10.1103/Physreve.87.042304  1
2013 Kandoth C, Schultz N, Cherniack AD, Akbani R, Liu Y, Shen H, Robertson AG, Pashtan I, Shen R, Benz CC, Yau C, Laird PW, Ding L, Zhang W, et al. Integrated genomic characterization of endometrial carcinoma. Nature. 497: 67-73. PMID 23636398 DOI: 10.1038/Nature12113  1
2013 Sarris PF, Trantas EA, Baltrus DA, Bull CT, Wechter WP, Yan S, Ververidis F, Almeida NF, Jones CD, Dangl JL, Panopoulos NJ, Vinatzer BA, Goumas DE. Comparative genomics of multiple strains of Pseudomonas cannabina pv. alisalensis, a potential model pathogen of both monocots and dicots. Plos One. 8: e59366. PMID 23555661 DOI: 10.1371/Journal.Pone.0059366  1
2013 Jones CD, DeWalt DA. Lost in translation: are we reaching the target audience with internet-based education materials? Journal of Vascular and Interventional Radiology : Jvir. 24: 474-5. PMID 23522156 DOI: 10.1016/j.jvir.2013.02.008  1
2013 Cené CW, Haymore LB, Dolan-Soto D, Lin FC, Pignone M, Dewalt DA, Wu JR, Jones CD, Corbie-Smith G. Self-care confidence mediates the relationship between perceived social support and self-care maintenance in adults with heart failure. Journal of Cardiac Failure. 19: 202-10. PMID 23482082 DOI: 10.1016/J.Cardfail.2013.01.009  1
2013 Wu JR, Holmes GM, DeWalt DA, Macabasco-O'Connell A, Bibbins-Domingo K, Ruo B, Baker DW, Schillinger D, Weinberger M, Broucksou KA, Erman B, Jones CD, Cene CW, Pignone M. Low literacy is associated with increased risk of hospitalization and death among individuals with heart failure. Journal of General Internal Medicine. 28: 1174-80. PMID 23478997 DOI: 10.1007/S11606-013-2394-4  1
2013 Huang Y, Hu Y, Jones CD, MacLeod JN, Chiang DY, Liu Y, Prins JF, Liu J. A robust method for transcript quantification with RNA-seq data. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 20: 167-87. PMID 23461570 DOI: 10.1089/Cmb.2012.0230  1
2013 Logan AC, Zhang B, Narasimhan B, Carlton V, Zheng J, Moorhead M, Krampf MR, Jones CD, Waqar AN, Faham M, Zehnder JL, Miklos DB. Minimal residual disease quantification using consensus primers and high-throughput IGH sequencing predicts post-transplant relapse in chronic lymphocytic leukemia. Leukemia. 27: 1659-65. PMID 23419792 DOI: 10.1038/leu.2013.52  1
2013 Cox PM, Pearson D, Booth BB, Friedlingstein P, Huntingford C, Jones CD, Luke CM. Sensitivity of tropical carbon to climate change constrained by carbon dioxide variability. Nature. 494: 341-4. PMID 23389447 DOI: 10.1038/nature11882  1
2013 Roach JM, Racioppi L, Jones CD, Masci AM. Phylogeny of Toll-like receptor signaling: adapting the innate response. Plos One. 8: e54156. PMID 23326591 DOI: 10.1371/journal.pone.0054156  1
2013 Jones CD, Cummings IG, Shipolini AR, McCormack DJ. Does surgery improve prognosis in patients with small-cell lung carcinoma? Interactive Cardiovascular and Thoracic Surgery. 16: 375-80. PMID 23169878 DOI: 10.1093/icvts/ivs475  1
2013 Hu Y, Huang Y, Du Y, Orellana CF, Singh D, Johnson AR, Monroy A, Kuan PF, Hammond SM, Makowski L, Randell SH, Chiang DY, Hayes DN, Jones C, Liu Y, et al. DiffSplice: the genome-wide detection of differential splicing events with RNA-seq. Nucleic Acids Research. 41: e39. PMID 23155066 DOI: 10.1093/nar/gks1026  1
2013 Foley AM, Dalmonech D, Friend AD, Aires F, Archibald AT, Bartlein P, Bopp L, Chappellaz J, Cox P, Edwards NR, Feulner G, Friedlingstein P, Harrison SP, Hopcroft PO, Jones CD, et al. Evaluation of biospheric components in earth system models using modern and palaeo-observations: The state-of-the-art Biogeosciences. 10: 8305-8328. DOI: 10.5194/Bg-10-8305-2013  1
2013 Jones CD, Cox JA, Toriani-Moura E, Cooper RJ. Nest-site characteristics of Bachman's sparrows and their relationship to plant succession following prescribed burns Wilson Journal of Ornithology. 125: 293-300. DOI: 10.1676/12-119.1  1
2013 Tata PV, Vincent BG, Kuan P, Jones C, Serody J, Sarantopoulos S. High-Throughput Immunoglobulin Heavy Chain Variable Region Repertoire Analysis Of CD27+ B Cell Subsets From Patients With Chronic Gvhd Blood. 122: 2055-2055. DOI: 10.1182/Blood.V122.21.2055.2055  0.01
2013 Brovkin V, Boysen L, Arora VK, Boisier JP, Cadule P, Chini L, Claussen M, Friedlingstein P, Gayler V, Van den hurk BJJM, Hurtt GC, Jones CD, Kato E, De noblet-ducoudre N, Pacifico F, et al. Effect of anthropogenic land-use and land-cover changes on climate and land carbon storage in CMIP5 projections for the twenty-first century Journal of Climate. 26: 6859-6881. DOI: 10.1175/Jcli-D-12-00623.1  1
2013 Burke EJ, Jones CD, Koven CD. Estimating the permafrost-carbon climate response in the CMIP5 climate models using a simplified approach Journal of Climate. 26: 4897-4909. DOI: 10.1175/Jcli-D-12-00550.1  1
2013 Arora VK, Boer GJ, Friedlingstein P, Eby M, Jones CD, Christian JR, Bonan G, Bopp L, Brovkin V, Cadule P, Hajima T, Ilyina T, Lindsay K, Tjiputra JF, Wu T. Carbon-concentration and carbon-climate feedbacks in CMIP5 earth system models Journal of Climate. 26: 5289-5314. DOI: 10.1175/JCLI-D-12-00494.1  1
2013 Cox CE, Jones CD, Wares JP, Castillo KD, Mcfield MD, Bruno JF. Genetic testing reveals some mislabeling but general compliance with a ban on herbivorous fish harvesting in Belize Conservation Letters. 6: 132-140. DOI: 10.1111/J.1755-263X.2012.00286.X  1
2013 Creighton CJ, Morgan M, Gunaratne PH, Wheeler DA, Gibbs RA, Robertson G, Chu A, Beroukhim R, Cibulskis K, Signoretti S, Vandin F, Wu HT, Raphael BJ, Verhaak RGW, Tamboli P, et al. Comprehensivemolecular characterization of clear cell renal cell carcinoma Nature. 499: 43-49. DOI: 10.1038/Nature12222  0.01
2013 La Mesa M, Catalano B, Jones CD. Early life history of the ocellated icefish, Chionodraco rastrospinosus, off the Antarctic Peninsula Antarctic Science. 25: 373-380. DOI: 10.1017/S0954102012001095  1
2013 Gutt J, Griffiths HJ, Jones CD. Circumpolar overview and spatial heterogeneity of Antarctic macrobenthic communities Marine Biodiversity. 43: 481-487. DOI: 10.1007/s12526-013-0152-9  1
2013 Clark SK, Jones CD, Reutzel DR. Using the Text Structures of Information Books to Teach Writing in the Primary Grades Early Childhood Education Journal. 41: 265-271. DOI: 10.1007/S10643-012-0547-4  1
2013 Burke EJ, Dankers R, Jones CD, Wiltshire AJ. A retrospective analysis of pan Arctic permafrost using the JULES land surface model Climate Dynamics. 41: 1025-1038. DOI: 10.1007/s00382-012-1648-x  1
2013 Kock KH, Gröger J, Jones CD. Interannual variability in the feeding of ice fish (Notothenioidei, Channichthyidae) in the southern Scotia Arc and the Antarctic Peninsula region (CCAMLR Subareas 48.1 and 48.2) Polar Biology. 36: 1451-1462. DOI: 10.1007/s00300-013-1363-z  1
2012 Viswanathan M, Golin CE, Jones CD, Ashok M, Blalock S, Wines RC, Coker-Schwimmer EJ, Grodensky CA, Rosen DL, Yuen A, Sista P, Lohr KN. Closing the quality gap: revisiting the state of the science (vol. 4: medication adherence interventions: comparative effectiveness). Evidence Report/Technology Assessment. 1-685. PMID 24422970  1
2012 Kohl KP, Jones CD, Sekelsky J. Evolution of an MCM complex in flies that promotes meiotic crossovers by blocking BLM helicase. Science (New York, N.Y.). 338: 1363-5. PMID 23224558 DOI: 10.1126/Science.1228190  1
2012 Coronado VG, McGuire LC, Sarmiento K, Bell J, Lionbarger MR, Jones CD, Geller AI, Khoury N, Xu L. Trends in Traumatic Brain Injury in the U.S. and the public health response: 1995-2009. Journal of Safety Research. 43: 299-307. PMID 23127680 DOI: 10.1016/j.jsr.2012.08.011  0.01
2012 Jones CD, Manno MS, Vogt B. Tier one alert! A psychiatric rapid response team. Nursing Management. 43: 34-40. PMID 23086171 DOI: 10.1097/01.NUMA.0000419447.44632.52  1
2012 Jones CD, Nakhdjevani A, Lidder S. Surgical management of idiopathic torticollis secondary to a fibrotic band. Orthopedic Reviews. 4: e27. PMID 23066495 DOI: 10.4081/or.2012.e27  0.01
2012 Roth AE, Jones CD, Durian DJ. Coarsening of a two-dimensional foam on a dome. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 86: 021402. PMID 23005758 DOI: 10.1103/Physreve.86.021402  1
2012 Viswanathan M, Golin CE, Jones CD, Ashok M, Blalock SJ, Wines RC, Coker-Schwimmer EJ, Rosen DL, Sista P, Lohr KN. Interventions to improve adherence to self-administered medications for chronic diseases in the United States: a systematic review. Annals of Internal Medicine. 157: 785-95. PMID 22964778 DOI: 10.7326/0003-4819-157-11-201212040-00538  1
2012 Hammerman PS, Voet D, Lawrence MS, Jing R, Cibulskis K, Sivachenko A, Stojanov P, McKenna A, Lander ES, Gabriel S, Getz G, Imielinski M, Helman E, Hernandez B, Pho NH, et al. Comprehensive genomic characterization of squamous cell lung cancers Nature. 489: 519-525. PMID 22960745 DOI: 10.1038/Nature11404  0.01
2012 Schlatterer JC, Wieder MS, Jones CD, Pollack L, Brenowitz M. Pyrite footprinting of RNA. Biochemical and Biophysical Research Communications. 425: 374-8. PMID 22842460 DOI: 10.1016/J.Bbrc.2012.07.100  1
2012 Muzny DM, Bainbridge MN, Chang K, Dinh HH, Drummond JA, Fowler G, Kovar CL, Lewis LR, Morgan MB, Newsham IF, Reid JG, Santibanez J, Shinbrot E, Trevino LR, Wu YQ, et al. Comprehensive molecular characterization of human colon and rectal cancer Nature. 487: 330-337. PMID 22810696 DOI: 10.1038/Nature11252  0.01
2012 Jones CD, Holmes GM, Dewalt DA, Erman B, Broucksou K, Hawk V, Cene CW, Wu JR, Pignone M. Is adherence to weight monitoring or weight-based diuretic self-adjustment associated with fewer heart failure-related emergency department visits or hospitalizations? Journal of Cardiac Failure. 18: 576-84. PMID 22748492 DOI: 10.1016/J.Cardfail.2012.05.004  1
2012 Jones CD, Near TJ. The reproductive behaviour of Pogonophryne scotti confirms widespread egg-guarding parental care among Antarctic notothenioids. Journal of Fish Biology. 80: 2629-35. PMID 22650438 DOI: 10.1111/J.1095-8649.2012.03282.X  1
2012 DeWalt DA, Schillinger D, Ruo B, Bibbins-Domingo K, Baker DW, Holmes GM, Weinberger M, Macabasco-O'Connell A, Broucksou K, Hawk V, Grady KL, Erman B, Sueta CA, Chang PP, Cene CW, ... ... Jones CD, et al. Multisite randomized trial of a single-session versus multisession literacy-sensitive self-care intervention for patients with heart failure. Circulation. 125: 2854-62. PMID 22572916 DOI: 10.1161/Circulationaha.111.081745  1
2012 Pfennig KS, Allenby A, Martin RA, Monroy A, Jones CD. A suite of molecular markers for identifying species, detecting introgression and describing population structure in spadefoot toads (Spea spp.). Molecular Ecology Resources. 12: 909-17. PMID 22564443 DOI: 10.1111/J.1755-0998.2012.03150.X  1
2012 Arai S, Sahaf B, Narasimhan B, Chen GL, Jones CD, Lowsky R, Shizuru JA, Johnston LJ, Laport GG, Weng WK, Benjamin JE, Schaenman J, Brown J, Ramirez J, Zehnder JL, et al. Prophylactic rituximab after allogeneic transplantation decreases B-cell alloimmunity with low chronic GVHD incidence. Blood. 119: 6145-54. PMID 22563089 DOI: 10.1182/Blood-2011-12-395970  1
2012 Leichty AR, Pfennig DW, Jones CD, Pfennig KS. Relaxed genetic constraint is ancestral to the evolution of phenotypic plasticity. Integrative and Comparative Biology. 52: 16-30. PMID 22526866 DOI: 10.1093/Icb/Ics049  1
2012 Jones CD, Loehr L, Franceschini N, Rosamond WD, Chang PP, Shahar E, Couper DJ, Rose KM. Orthostatic hypotension as a risk factor for incident heart failure: the atherosclerosis risk in communities study. Hypertension. 59: 913-8. PMID 22431580 DOI: 10.1161/Hypertensionaha.111.188151  1
2012 Near TJ, Dornburg A, Kuhn KL, Eastman JT, Pennington JN, Patarnello T, Zane L, Fernández DA, Jones CD. Ancient climate change, antifreeze, and the evolutionary diversification of Antarctic fishes. Proceedings of the National Academy of Sciences of the United States of America. 109: 3434-9. PMID 22331888 DOI: 10.1073/Pnas.1115169109  1
2012 Jones CD, Greenwood RH, Misra A, Bachmann MO. Incidence and progression of diabetic retinopathy during 17 years of a population-based screening program in England. Diabetes Care. 35: 592-6. PMID 22279031 DOI: 10.2337/dc11-0943  0.01
2012 Jones CD, Tan JC, Lloyd GO. Supramolecular isomerism of a metallocyclic dipyridyldiamide ligand metal halide system generating isostructural (Hg, Co and Zn) porous materials. Chemical Communications (Cambridge, England). 48: 2110-2. PMID 22249905 DOI: 10.1039/C2Cc16691G  1
2011 Logan AC, Gao H, Wang C, Sahaf B, Jones CD, Marshall EL, Buño I, Armstrong R, Fire AZ, Weinberg KI, Mindrinos M, Zehnder JL, Boyd SD, Xiao W, Davis RW, et al. High-throughput VDJ sequencing for quantification of minimal residual disease in chronic lymphocytic leukemia and immune reconstitution assessment. Proceedings of the National Academy of Sciences of the United States of America. 108: 21194-9. PMID 22160699 DOI: 10.1073/Pnas.1118357109  1
2011 Jabara CB, Jones CD, Roach J, Anderson JA, Swanstrom R. Accurate sampling and deep sequencing of the HIV-1 protease gene using a Primer ID. Proceedings of the National Academy of Sciences of the United States of America. 108: 20166-71. PMID 22135472 DOI: 10.1073/Pnas.1110064108  1
2011 Clarke KA, Jones CD. Taking up the public health challenge. The Veterinary Record. 169: 384-5. PMID 21984627 DOI: 10.1136/vr.d5386  0.01
2011 Earley EJ, Jones CD. Next-generation mapping of complex traits with phenotype-based selection and introgression. Genetics. 189: 1203-9. PMID 21940681 DOI: 10.1534/Genetics.111.129445  1
2011 Blose JM, Pabit SA, Meisburger SP, Li L, Jones CD, Pollack L. Effects of a protecting osmolyte on the ion atmosphere surrounding DNA duplexes. Biochemistry. 50: 8540-7. PMID 21882885 DOI: 10.1021/Bi200710M  1
2011 Jones CD, Schlatterer JC, Brenowitz M, Pollack L. A microfluidic device that generates hydroxyl radicals to probe the solvent accessible surface of nucleic acids. Lab On a Chip. 11: 3458-64. PMID 21863183 DOI: 10.1039/C1Lc20280D  1
2011 Singh D, Orellana CF, Hu Y, Jones CD, Liu Y, Chiang DY, Liu J, Prins JF. FDM: a graph-based statistical method to detect differential transcription using RNA-seq data. Bioinformatics (Oxford, England). 27: 2633-40. PMID 21824971 DOI: 10.1093/Bioinformatics/Btr458  1
2011 Baltrus DA, Nishimura MT, Romanchuk A, Chang JH, Mukhtar MS, Cherkis K, Roach J, Grant SR, Jones CD, Dangl JL. Dynamic evolution of pathogenicity revealed by sequencing and comparative genomics of 19 Pseudomonas syringae isolates. Plos Pathogens. 7: e1002132. PMID 21799664 DOI: 10.1371/Journal.Ppat.1002132  1
2011 Ducray R, Jones CD, Jung FH, Simpson I, Curwen J, Pass M. Novel imidazo[1,2-a]pyridine based inhibitors of the IGF-1 receptor tyrosine kinase: optimization of the aniline. Bioorganic & Medicinal Chemistry Letters. 21: 4702-4. PMID 21764307 DOI: 10.1016/j.bmcl.2011.06.090  0.01
2011 Strachan NJ, Hunter CJ, Jones CD, Wilson RS, Ethelberg S, Cross P, Williams AP, MacRitchie L, Rotariu O, Chadwick D. The relationship between lay and technical views of Escherichia coli O157 risk. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 366: 1999-2009. PMID 21624920 DOI: 10.1098/Rstb.2010.0393  1
2011 Sawyer JM, Glass S, Li T, Shemer G, White ND, Starostina NG, Kipreos ET, Jones CD, Goldstein B. Overcoming redundancy: an RNAi enhancer screen for morphogenesis genes in Caenorhabditis elegans. Genetics. 188: 549-64. PMID 21527776 DOI: 10.1534/Genetics.111.129486  1
2011 Tseng D, Jones CD, Anderson M, Warnke R, Zehnder JL, Miklos DB. Clonally identical Hodgkin's disease develops after allogeneic hematopoietic cell transplant for CLL. Bone Marrow Transplantation. 46: 1576-8. PMID 21258419 DOI: 10.1038/Bmt.2010.340  1
2011 Jones CD, Hunter C, Williams AP, Strachan NJ, Cross P. Escherichia coli O157: comparing awareness of rural residents and visitors in livestock farming areas. Epidemiology and Infection. 139: 1522-30. PMID 21211111 DOI: 10.1017/S0950268810002918  1
2011 Betts RA, Collins M, Hemming DL, Jones CD, Lowe JA, Sanderson MG. When could global warming reach 4°C? Philosophical Transactions. Series a, Mathematical, Physical, and Engineering Sciences. 369: 67-84. PMID 21115513 DOI: 10.1098/rsta.2010.0292  0.01
2011 Zerboni L, Berarducci B, Rajamani J, Jones CD, Zehnder JL, Arvin A. Varicella-zoster virus glycoprotein E is a critical determinant of virulence in the SCID mouse-human model of neuropathogenesis. Journal of Virology. 85: 98-111. PMID 20962081 DOI: 10.1128/Jvi.01902-10  1
2010 Pabit SA, Meisburger SP, Li L, Blose JM, Jones CD, Pollack L. Counting ions around DNA with anomalous small-angle X-ray scattering. Journal of the American Chemical Society. 132: 16334-6. PMID 21047071 DOI: 10.1021/Ja107259Y  1
2010 Temple BR, Jones CD, Jones AM. Evolution of a signaling nexus constrained by protein interfaces and conformational States. Plos Computational Biology. 6: e1000962. PMID 20976244 DOI: 10.1371/Journal.Pcbi.1000962  1
2010 Anderson JA, Ping LH, Dibben O, Jabara CB, Arney L, Kincer L, Tang Y, Hobbs M, Hoffman I, Kazembe P, Jones CD, Borrow P, Fiscus S, Cohen MS, Swanstrom R, et al. HIV-1 Populations in Semen Arise through Multiple Mechanisms. Plos Pathogens. 6: e1001053. PMID 20808902 DOI: 10.1371/Journal.Ppat.1001053  1
2010 Hewitt L, Tighe A, Santaguida S, White AM, Jones CD, Musacchio A, Green S, Taylor SS. Sustained Mps1 activity is required in mitosis to recruit O-Mad2 to the Mad1-C-Mad2 core complex. The Journal of Cell Biology. 190: 25-34. PMID 20624899 DOI: 10.1083/Jcb.201002133  1
2010 Jones CD, Arai S, Lowsky R, Tyan DB, Zehnder JL, Miklos DB. Complete donor T-cell engraftment 30 days after allogeneic transplantation predicts molecular remission in high-risk chronic lymphocytic leukaemia. British Journal of Haematology. 150: 637-9. PMID 20528878 DOI: 10.1111/j.1365-2141.2010.08252.x  1
2010 Boyd SD, Gaëta BA, Jackson KJ, Fire AZ, Marshall EL, Merker JD, Maniar JM, Zhang LN, Sahaf B, Jones CD, Simen BB, Hanczaruk B, Nguyen KD, Nadeau KC, Egholm M, et al. Individual variation in the germline Ig gene repertoire inferred from variable region gene rearrangements. Journal of Immunology (Baltimore, Md. : 1950). 184: 6986-92. PMID 20495067 DOI: 10.4049/Jimmunol.1000445  1
2010 Zhu C, Chen D, Shen Y, Jones CD, Glaser MA, Maclennan JE, Clark NA. Nanophase segregation in binary mixtures of a bent-core and a rodlike liquid-crystal molecule. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 81: 011704. PMID 20365388 DOI: 10.1103/Physreve.81.011704  1
2010 Lewis TJ, Dupont WD, Egan KM, Jones CD, Disher AC, Riddle WR, Fair AM. The "Got D'ViBE?" study: an inter-institutional project assessing vitamin D and mammographic breast density. Journal of Health Care For the Poor and Underserved. 21: 17-25. PMID 20173282 DOI: 10.1353/hpu.0.0238  1
2010 Merker JD, Jones CD, Oh ST, Schrijver I, Gotlib J, Zehnder JL. Design and evaluation of a real-time PCR assay for quantification of JAK2 V617F and wild-type JAK2 transcript levels in the clinical laboratory. The Journal of Molecular Diagnostics : Jmd. 12: 58-64. PMID 19959796 DOI: 10.2353/Jmoldx.2010.090068  1
2009 Walba DM, Yang H, Keller P, Zhu C, Shao R, Coleman DA, Jones CD, Clark NA. A main-chain de vries smectic liquid crystal polymer prepared by hoveyda-grubbs catalyst initiated acyclic diene metathesis polymerization. Macromolecular Rapid Communications. 30: 1894-9. PMID 21638471 DOI: 10.1002/Marc.200900249  1
2009 Walba DM, Yang H, Keller P, Zhu C, Shao R, Coleman DA, Jones CD, Clark NA. Macromol. Rapid commun. 22/2009. Macromolecular Rapid Communications. 30. PMID 21638467 DOI: 10.1002/Marc.200990058  1
2009 Boyd SD, Marshall EL, Merker JD, Maniar JM, Zhang LN, Sahaf B, Jones CD, Simen BB, Hanczaruk B, Nguyen KD, Nadeau KC, Egholm M, Miklos DB, Zehnder JL, Fire AZ. Measurement and clinical monitoring of human lymphocyte clonality by massively parallel VDJ pyrosequencing. Science Translational Medicine. 1: 12ra23. PMID 20161664 DOI: 10.1126/Scitranslmed.3000540  1
2009 Misra A, Bachmann MO, Greenwood RH, Jenkins C, Shaw A, Barakat O, Flatman M, Jones CD. Trends in yield and effects of screening intervals during 17 years of a large UK community-based diabetic retinopathy screening programme. Diabetic Medicine : a Journal of the British Diabetic Association. 26: 1040-7. PMID 19900237 DOI: 10.1111/j.1464-5491.2009.02820.x  0.01
2009 Luke RW, Ballard P, Buttar D, Campbell L, Curwen J, Emery SC, Griffen AM, Hassall L, Hayter BR, Jones CD, McCoull W, Mellor M, Swain ML, Tucker JA. Novel thienopyrimidine and thiazolopyrimidine kinase inhibitors with activity against Tie-2 in vitro and in vivo. Bioorganic & Medicinal Chemistry Letters. 19: 6670-4. PMID 19854647 DOI: 10.1016/j.bmcl.2009.10.001  1
2009 Broekhuizen CA, de Boer L, Schipper K, Jones CD, Quadir S, Feldman RG, Vandenbroucke-Grauls CM, Zaat SA. The influence of antibodies on Staphylococcus epidermidis adherence to polyvinylpyrrolidone-coated silicone elastomer in experimental biomaterial-associated infection in mice. Biomaterials. 30: 6444-50. PMID 19716173 DOI: 10.1016/j.biomaterials.2009.08.018  1
2009 Friedman EJ, Temple BR, Hicks SN, Sondek J, Jones CD, Jones AM. Prediction of protein-protein interfaces on G-protein beta subunits reveals a novel phospholipase C beta2 binding domain. Journal of Molecular Biology. 392: 1044-54. PMID 19646992 DOI: 10.1016/J.Jmb.2009.07.076  1
2009 Hough LE, Jung HT, Krüerke D, Heberling MS, Nakata M, Jones CD, Chen D, Link DR, Zasadzinski J, Heppke G, Rabe JP, Stocker W, Körblova E, Walba DM, Glaser MA, et al. Helical nanofilament phases. Science (New York, N.Y.). 325: 456-60. PMID 19628864 DOI: 10.1126/Science.1170027  1
2009 Hough LE, Spannuth M, Nakata M, Coleman DA, Jones CD, Dantlgraber G, Tschierske C, Watanabe J, Körblova E, Walba DM, Maclennan JE, Glaser MA, Clark NA. Chiral isotropic liquids from achiral molecules. Science (New York, N.Y.). 325: 452-6. PMID 19628863 DOI: 10.1126/Science.1170028  1
2009 Howell KJ, Lavorato A, Visentin MT, Smith RE, Schaefer G, Jones CD, Weibel L, Denton CP, Harper JI, Woo P. Validation of a protocol for the assessment of skin temperature and blood flow in childhood localised scleroderma. Skin Research and Technology : Official Journal of International Society For Bioengineering and the Skin (Isbs) [and] International Society For Digital Imaging of Skin (Isdis) [and] International Society For Skin Imaging (Issi). 15: 346-56. PMID 19624432 DOI: 10.1111/j.1600-0846.2009.00371.x  0.01
2009 Faddah DA, Ganko EW, McCoach C, Pickrell JK, Hanlon SE, Mann FG, Mieczkowska JO, Jones CD, Lieb JD, Vision TJ. Systematic identification of balanced transposition polymorphisms in Saccharomyces cerevisiae. Plos Genetics. 5: e1000502. PMID 19503594 DOI: 10.1371/Journal.Pgen.1000502  1
2009 Allen MR, Frame DJ, Huntingford C, Jones CD, Lowe JA, Meinshausen M, Meinshausen N. Warming caused by cumulative carbon emissions towards the trillionth tonne. Nature. 458: 1163-6. PMID 19407800 DOI: 10.1038/nature08019  1
2009 Mitchell RE, Shepherd MR, Besson D, Pedlar TK, Cronin-Hennessy D, Gao KY, Hietala J, Kubota Y, Klein T, Lang BW, Poling R, Scott AW, Smith A, Zweber P, Dobbs S, ... ... Jones CD, et al. Observation of D+ --> etae + nue. Physical Review Letters. 102: 081801. PMID 19257732 DOI: 10.1103/Physrevlett.102.081801  1
2009 Dworkin I, Jones CD. Genetic changes accompanying the evolution of host specialization in Drosophila sechellia. Genetics. 181: 721-36. PMID 19033155 DOI: 10.1534/genetics.108.093419  1
2009 Reinhardt JA, Baltrus DA, Nishimura MT, Jeck WR, Jones CD, Dangl JL. De novo assembly using low-coverage short read sequence data from the rice pathogen Pseudomonas syringae pv. oryzae. Genome Research. 19: 294-305. PMID 19015323 DOI: 10.1101/Gr.083311.108  1
2008 Shih HJ, Jones CD. Patterns of amino acid evolution in the Drosophila ananassae chimeric gene, siren, parallel those of other Adh-derived chimeras. Genetics. 180: 1261-3. PMID 18780749 DOI: 10.1534/genetics.108.090068  1
2008 Woodman ME. Direct PCR of intact bacteria (colony PCR). Current Protocols in Microbiology. Appendix 3D. PMID 18770531 DOI: 10.1002/9780471729259.Mca03Ds9  0.01
2008 Lawniczak MK, Holloway AK, Begun DJ, Jones CD. Genomic analysis of the relationship between gene expression variation and DNA polymorphism in Drosophila simulans. Genome Biology. 9: R125. PMID 18700012 DOI: 10.1186/Gb-2008-9-8-R125  1
2008 Kopp A, Barmina O, Hamilton AM, Higgins L, McIntyre LM, Jones CD. Evolution of gene expression in the Drosophila olfactory system. Molecular Biology and Evolution. 25: 1081-92. PMID 18296696 DOI: 10.1093/Molbev/Msn055  1
2008 Mezey JG, Nuzhdin SV, Ye F, Jones CD. Coordinated evolution of co-expressed gene clusters in the Drosophila transcriptome. Bmc Evolutionary Biology. 8: 2. PMID 18179715 DOI: 10.1186/1471-2148-8-2  1
2007 Gabriel WN, McNuff R, Patel SK, Gregory TR, Jeck WR, Jones CD, Goldstein B. The tardigrade Hypsibius dujardini, a new model for studying the evolution of development. Developmental Biology. 312: 545-59. PMID 17996863 DOI: 10.1016/J.Ydbio.2007.09.055  1
2007 Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, ... ... Jones CD, et al. Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450: 203-18. PMID 17994087 DOI: 10.1038/Nature06341  0.01
2007 Begun DJ, Holloway AK, Stevens K, Hillier LW, Poh YP, Hahn MW, Nista PM, Jones CD, Kern AD, Dewey CN, Pachter L, Myers E, Langley CH. Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans. Plos Biology. 5: e310. PMID 17988176 DOI: 10.1371/Journal.Pbio.0050310  1
2007 Holloway AK, Lawniczak MK, Mezey JG, Begun DJ, Jones CD. Adaptive gene expression divergence inferred from population genomics. Plos Genetics. 3: 2007-13. PMID 17967066 DOI: 10.1371/Journal.Pgen.0030187  1
2007 Jeck WR, Reinhardt JA, Baltrus DA, Hickenbotham MT, Magrini V, Mardis ER, Dangl JL, Jones CD. Extending assembly of short DNA sequences to handle error. Bioinformatics (Oxford, England). 23: 2942-4. PMID 17893086 DOI: 10.1093/Bioinformatics/Btm451  1
2007 Jones CD, Bartee JA, Leite-Browning ML, Blackshear MA. Methamphetamine-induced locomotor activity and behavioral sensitization: Are dopamine D3 receptors involved? Cellular and Molecular Biology. 53: 15-22. PMID 17531156 DOI: 10.1170/T803  1
2007 Begun DJ, Lindfors HA, Kern AD, Jones CD. Evidence for de novo evolution of testis-expressed genes in the Drosophila yakuba/Drosophila erecta clade. Genetics. 176: 1131-7. PMID 17435230 DOI: 10.1534/genetics.106.069245  1
2006 Masly JP, Jones CD, Noor MA, Locke J, Orr HA. Gene transposition as a cause of hybrid sterility in Drosophila. Science (New York, N.Y.). 313: 1448-50. PMID 16960009 DOI: 10.1126/Science.1128721  1
2006 Levine MT, Jones CD, Kern AD, Lindfors HA, Begun DJ. Novel genes derived from noncoding DNA in Drosophila melanogaster are frequently X-linked and exhibit testis-biased expression. Proceedings of the National Academy of Sciences of the United States of America. 103: 9935-9. PMID 16777968 DOI: 10.1073/Pnas.0509809103  1
2005 Jones CD, Begun DJ. Parallel evolution of chimeric fusion genes. Proceedings of the National Academy of Sciences of the United States of America. 102: 11373-8. PMID 16076957 DOI: 10.1073/pnas.0503528102  1
2005 Jones CD. The genetics of adaptation in Drosophila sechellia. Genetica. 123: 137-45. PMID 15881686 DOI: 10.1007/s10709-004-2728-6  1
2005 Jones CD, Custer AW, Begun DJ. Origin and evolution of a chimeric fusion gene in Drosophila subobscura, D. madeirensis and D. guanche. Genetics. 170: 207-19. PMID 15781692 DOI: 10.1534/Genetics.104.037283  1
2004 Kern AD, Jones CD, Begun DJ. Molecular population genetics of male accessory gland proteins in the Drosophila simulans complex. Genetics. 167: 725-35. PMID 15238524 DOI: 10.1534/genetics.103.020883  1
2004 Jones CD. Genetics of egg production in Drosophila sechellia Heredity. 92: 235-241. PMID 14710171 DOI: 10.1038/sj.hdy.6800401  1
2002 Kern AD, Jones CD, Begun DJ. Genomic effects of nucleotide substitutions in Drosophila simulans. Genetics. 162: 1753-61. PMID 12524346  1
2001 Jones CD. The genetic basis of larval resistance to a host plant toxin in Drosophila sechellia Genetical Research. 78: 225-233. PMID 11865712 DOI: 10.1017/S0016672301005298  1
2001 Jones CD. Extension of the castle - Wright effective factor estimator to sex linkage and haplodiploidy Journal of Heredity. 92: 274-276. PMID 11447245 DOI: 10.1093/Jhered/92.3.274  1
2000 Ranheim EA, Jones CD, Zehnder JL. Sensitive detection of clonal immunoglobulin rearrangements in frozen and paraffin embedded tissues by polymerase chain reaction heteroduplex analysis Diagnostic Molecular Pathology. 9: 177-183. PMID 11129440 DOI: 10.1097/00019606-200012000-00001  1
2000 Otto SP, Jones CD. Detecting the undetected: estimating the total number of loci underlying a quantitative trait. Genetics. 156: 2093-107. PMID 11102398  1
2000 Allsopp PG, Jones CD, Hillyard JK. Variation among sugarcane clones for resistance to armyworms Field Crops Research. 67: 223-226. DOI: 10.1016/S0378-4290(00)00097-6  1
1998 Jones CD. The genetic basis of Drosophila sechellia's resistance to a host plant toxin Genetics. 149: 1899-1908. PMID 9691045  1
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