Pawel Michalak - Publications

Affiliations: 
Virginia Bioinformatics Institute, Blacksburg, VA, United States 
Website:
http://www.vbi.vt.edu/faculty/personal/Pawel_Michalak

56 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Aggarwal DD, Rybnikov S, Sapielkin S, Rashkovetsky E, Frenkel Z, Singh M, Michalak P, Korol AB. Seasonal changes in recombination characteristics in a natural population of Drosophila melanogaster. Heredity. PMID 34163036 DOI: 10.1038/s41437-021-00449-2  0.321
2021 Kinney N, Kang L, Bains H, Lawson E, Husain M, Husain K, Sandhu I, Shin Y, Carter JK, Anandakrishnan R, Michalak P, Garner H. Ethnically biased microsatellites contribute to differential gene expression and glutathione metabolism in Africans and Europeans. Plos One. 16: e0249148. PMID 33765058 DOI: 10.1371/journal.pone.0249148  0.352
2020 Budnick JA, Sheehan LM, Ginder MJ, Failor KC, Perkowski JM, Pinto JF, Kohl KA, Kang L, Michalak P, Luo L, Heindl JE, Caswell CC. A central role for the transcriptional regulator VtlR in small RNA-mediated gene regulation in Agrobacterium tumefaciens. Scientific Reports. 10: 14968. PMID 32917931 DOI: 10.1038/s41598-020-72117-0  0.382
2020 Pinzari CA, Kang L, Michalak P, Jermiin LS, Price DK, Bonaccorso FJ. Analysis of genotype sequence data reveals the origin and evolutionary separation of Hawaiian hoary bat populations. Genome Biology and Evolution. PMID 32853363 DOI: 10.1093/gbe/evaa137  0.43
2020 Gemmell NJ, Rutherford K, Prost S, Tollis M, Winter D, Macey JR, Adelson DL, Suh A, Bertozzi T, Grau JH, Organ C, Gardner PP, Muffato M, Patricio M, Billis K, ... ... Michalak P, et al. The tuatara genome reveals ancient features of amniote evolution. Nature. PMID 32760000 DOI: 10.1038/S41586-020-2561-9  0.331
2019 Kinney N, Kang L, Eckstrand L, Pulenthiran A, Samuel P, Anandakrishnan R, Varghese RT, Michalak P, Garner HR. Abundance of ethnically biased microsatellites in human gene regions. Plos One. 14: e0225216. PMID 31830051 DOI: 10.1371/journal.pone.0225216  0.504
2019 Aggarwal DD, Rybnikov S, Cohen I, Frenkel Z, Rashkovetsky E, Michalak P, Korol AB. Desiccation-induced changes in recombination rate and crossover interference in Drosophila melanogaster: evidence for fitness-dependent plasticity. Genetica. PMID 31240599 DOI: 10.1007/s10709-019-00070-6  0.372
2019 Kang L, Rashkovetsky E, Michalak K, Garner HR, Mahaney JE, Rzigalinski BA, Korol A, Nevo E, Michalak P. Genomic divergence and adaptive convergence in from Evolution Canyon, Israel. Proceedings of the National Academy of Sciences of the United States of America. PMID 31127048 DOI: 10.1073/pnas.1720938116  0.462
2019 Lang JJV, Snyder RJ, Clapsadl MD, Michalak P, Kang L, Pérez-Fuentetaja A. Morphometric differentiation and gene flow in emerald shiners (Notropis atherinoides) from the lower Great Lakes and the Niagara River Journal of Great Lakes Research. 45: 324-332. DOI: 10.1016/J.Jglr.2018.12.002  0.374
2018 Michalak P, Kang L. Unique divergence of the breast cancer 2 () gene in Neanderthals. Hereditas. 155: 34. PMID 30410429 DOI: 10.1186/s41065-018-0073-5  0.335
2018 Michalak P, Kang L, Schou MF, Garner HR, Loeschcke V. Genomic signatures of experimental adaptive radiation in Drosophila. Molecular Ecology. PMID 30375065 DOI: 10.1111/mec.14917  0.425
2018 Kinney N, Titus-Glover K, Wren JD, Varghese RT, Michalak P, Liao H, Anandakrishnan R, Pulenthiran A, Kang L, Garner HR. CAGm: a repository of germline microsatellite variations in the 1000 genomes project. Nucleic Acids Research. PMID 30329086 DOI: 10.1093/nar/gky969  0.455
2018 Budnick JA, Sheehan LM, Kang L, Michalak P, Caswell CC. Characterization of three small proteins in linked to fucose utilization. Journal of Bacteriology. PMID 29967118 DOI: 10.1128/JB.00127-18  0.35
2017 Yablonovitch AL, Fu J, Li K, Mahato S, Kang L, Rashkovetsky E, Korol AB, Tang H, Michalak P, Zelhof AC, Nevo E, Li JB. Regulation of gene expression and RNA editing in Drosophila adapting to divergent microclimates. Nature Communications. 8: 1570. PMID 29146998 DOI: 10.1038/S41467-017-01658-2  0.466
2017 Kang L, George P, Price DK, Sharakhov I, Michalak P. Mapping Genomic Scaffolds to Chromosomes Using Laser Capture Microdissection in Application to Hawaiian Picture-Winged Drosophila. Cytogenetic and Genome Research. 152: 204-212. PMID 29130948 DOI: 10.1159/000481790  0.302
2017 Kang L, Garner HR, Price DK, Michalak P. A Test for Gene Flow among Sympatric and Allopatric Hawaiian Picture-Winged Drosophila. Journal of Molecular Evolution. PMID 28492967 DOI: 10.1007/s00239-017-9795-7  0.45
2017 Michalak P, Kang L, Sarup PM, Schou MF, Loeschcke V. Nucleotide diversity inflation as a genome-wide response to experimental lifespan extension in Drosophila melanogaster. Bmc Genomics. 18: 84. PMID 28088192 DOI: 10.1186/S12864-017-3485-0  0.422
2016 Velotta JP, Wegrzyn JL, Ginzburg S, Kang L, Czesny S, O'Neill RJ, McCormick SD, Michalak P, Schultz ET. Transcriptomic imprints of adaptation to fresh water: parallel evolution of osmoregulatory gene expression in the Alewife. Molecular Ecology. PMID 28012221 DOI: 10.1111/Mec.13983  0.431
2016 Maciak S, Michalak K, Kale SD, Michalak P. Nucleolar Dominance and Repression of 45S Ribosomal RNA Genes in Hybrids between Xenopus borealis and X. muelleri (2n = 36). Cytogenetic and Genome Research. PMID 27728911 DOI: 10.1159/000450665  0.42
2016 Brill E, Kang L, Michalak K, Michalak P, Price DK. Hybrid sterility and evolution in Hawaiian Drosophila: differential gene and allele-specific expression analysis of backcross males. Heredity. PMID 27220308 DOI: 10.1038/hdy.2016.31  0.46
2016 Kang L, Settlage R, McMahon W, Michalak K, Tae H, Garner HR, Stacy E, Price DK, Michalak P. Genomic Signatures of Speciation in Sympatric and Allopatric Hawaiian Picture-winged Drosophila. Genome Biology and Evolution. PMID 27189993 DOI: 10.1093/Gbe/Evw095  0.414
2016 Kang L, Aggarwal DD, Rashkovetsky E, Korol AB, Michalak P. Rapid genomic changes in Drosophila melanogaster adapting to desiccation stress in an experimental evolution system. Bmc Genomics. 17: 233. PMID 26979755 DOI: 10.1186/s12864-016-2556-y  0.359
2015 Michalak K, Maciak S, Kim YB, Santopietro G, Oh JH, Kang L, Garner HR, Michalak P. Nucleolar dominance and maternal control of 45S rDNA expression. Proceedings. Biological Sciences / the Royal Society. 282. PMID 26645200 DOI: 10.1098/Rspb.2015.2201  0.466
2015 Aggarwal DD, Rashkovetsky E, Michalak P, Cohen I, Ronin Y, Zhou D, Haddad GG, Korol AB. Experimental evolution of recombination and crossover interference in Drosophila caused by directional selection for stress-related traits. Bmc Biology. 13: 101. PMID 26614097 DOI: 10.1186/s12915-015-0206-5  0.387
2015 Keane M, Semeiks J, Webb AE, Li YI, Quesada V, Craig T, Madsen LB, van Dam S, Brawand D, Marques PI, Michalak P, Kang L, Bhak J, Yim HS, Grishin NV, et al. Insights into the evolution of longevity from the bowhead whale genome. Cell Reports. 10: 112-22. PMID 25565328 DOI: 10.1016/J.Celrep.2014.12.008  0.43
2015 Kang L, Michalak P. The evolution of cancer-related genes in hominoids. Journal of Molecular Evolution. 80: 37-41. PMID 25249249 DOI: 10.1007/s00239-014-9649-5  0.346
2014 Kim YB, Oh JH, McIver LJ, Rashkovetsky E, Michalak K, Garner HR, Kang L, Nevo E, Korol AB, Michalak P. Divergence of Drosophila melanogaster repeatomes in response to a sharp microclimate contrast in Evolution Canyon, Israel. Proceedings of the National Academy of Sciences of the United States of America. 111: 10630-5. PMID 25006263 DOI: 10.1073/Pnas.1410372111  0.45
2014 Dittmar WJ, McIver L, Michalak P, Garner HR, Valdez G. EvoCor: a platform for predicting functionally related genes using phylogenetic and expression profiles. Nucleic Acids Research. 42: W72-5. PMID 24848012 DOI: 10.1093/Nar/Gku442  0.4
2014 Michalak K, Czesny S, Epifanio J, Snyder RJ, Schultz ET, Velotta JP, McCormick SD, Brown BL, Santopietro G, Michalak P. Beta-thymosin gene polymorphism associated with freshwater invasiveness of alewife (Alosa pseudoharengus). Journal of Experimental Zoology. Part a, Ecological Genetics and Physiology. 321: 233-40. PMID 24482425 DOI: 10.1002/Jez.1854  0.423
2014 Michalak P. Evidence for maternal imprinting of 45S ribosomal RNA genes in Xenopus hybrids. Development Genes and Evolution. 224: 125-8. PMID 24477594 DOI: 10.1007/s00427-014-0464-1  0.361
2013 Bavarva JH, Tae H, Michalak P, Garner HR. Life cycle of an n-globin pseudogene microsatellite locus. Frontiers in Genetics. 4: 267. PMID 24363661 DOI: 10.3389/Fgene.2013.00267  0.355
2013 Hübner S, Rashkovetsky E, Kim YB, Oh JH, Michalak K, Weiner D, Korol AB, Nevo E, Michalak P. Genome differentiation of Drosophila melanogaster from a microclimate contrast in Evolution Canyon, Israel. Proceedings of the National Academy of Sciences of the United States of America. 110: 21059-64. PMID 24324170 DOI: 10.1073/Pnas.1321533111  0.498
2012 Czesny S, Epifanio J, Michalak P. Genetic divergence between freshwater and marine morphs of alewife (Alosa pseudoharengus): a 'next-generation' sequencing analysis. Plos One. 7: e31803. PMID 22438868 DOI: 10.1371/journal.pone.0031803  0.441
2011 Ma D, Michalak P. Ephemeral association between gene CG5762 and hybrid male sterility in Drosophila sibling species. Journal of Molecular Evolution. 73: 181-7. PMID 22052252 DOI: 10.1007/S00239-011-9466-Z  0.492
2011 Koroma AP, Jones R, Michalak P. Snapshot of DNA methylation changes associated with hybridization in Xenopus. Physiological Genomics. 43: 1276-80. PMID 21914783 DOI: 10.1152/Physiolgenomics.00110.2011  0.335
2010 Michalak P. An eruption of mobile elements in genomes of hybrid sunflowers. Heredity. 104: 329-30. PMID 20068587 DOI: 10.1038/hdy.2009.187  0.329
2009 Michalak P. Epigenetic, transposon and small RNA determinants of hybrid dysfunctions. Heredity. 102: 45-50. PMID 18545265 DOI: 10.1038/hdy.2008.48  0.337
2008 Michalak P, Ma D. The acylphosphatase (Acyp) alleles associate with male hybrid sterility in Drosophila. Gene. 416: 61-5. PMID 18440166 DOI: 10.1016/J.Gene.2008.03.006  0.464
2008 Malone JH, Michalak P. Physiological sex predicts hybrid sterility regardless of genotype. Science (New York, N.Y.). 319: 59. PMID 18174434 DOI: 10.1126/science.1148231  0.403
2008 Michalak P. Coexpression, coregulation, and cofunctionality of neighboring genes in eukaryotic genomes. Genomics. 91: 243-8. PMID 18082363 DOI: 10.1016/j.ygeno.2007.11.002  0.398
2008 Michalak P, Malone JH. Testis-derived microRNA profiles of African clawed frogs (Xenopus) and their sterile hybrids. Genomics. 91: 158-64. PMID 18079091 DOI: 10.1016/j.ygeno.2007.10.013  0.424
2007 Malone JH, Chrzanowski TH, Michalak P. Sterility and gene expression in hybrid males of Xenopus laevis and X. muelleri. Plos One. 2: e781. PMID 17712429 DOI: 10.1371/Journal.Pone.0000781  0.461
2007 Michalak P, Malone JH, Lee IT, Hoshino D, Ma D. Gene expression polymorphism in Drosophila populations. Molecular Ecology. 16: 1179-89. PMID 17391405 DOI: 10.1111/J.1365-294X.2007.03201.X  0.463
2006 Malone JH, Hawkins DL, Michalak P. Sex-biased gene expression in a ZW sex determination system. Journal of Molecular Evolution. 63: 427-36. PMID 17024524 DOI: 10.1007/S00239-005-0263-4  0.451
2006 Rashkovetsky E, Iliadi K, Michalak P, Lupu A, Nevo E, Feder ME, Korol A. Adaptive differentiation of thermotolerance in Drosophila along a microclimatic gradient. Heredity. 96: 353-9. PMID 16552433 DOI: 10.1038/sj.hdy.6800784  0.581
2004 Michalak P, Noor MA. Association of misexpression with sterility in hybrids of Drosophila simulansand D. mauritiana. Journal of Molecular Evolution. 59: 277-82. PMID 15486701 DOI: 10.1007/s00239-004-2622-y  0.648
2003 Noor MA, Michalak P, Donze D. Characterization of a male-predominant antisense transcript underexpressed in hybrids of Drosophila pseudoobscura and D. persimilis. Genetics. 165: 1823-30. PMID 14704168  0.562
2003 Michalak P, Noor MA. Genome-wide patterns of expression in Drosophila pure species and hybrid males. Molecular Biology and Evolution. 20: 1070-6. PMID 12777520 DOI: 10.1093/molbev/msg119  0.638
2003 Lerman DN, Michalak P, Helin AB, Bettencourt BR, Feder ME. Modification of heat-shock gene expression in Drosophila melanogaster populations via transposable elements. Molecular Biology and Evolution. 20: 135-44. PMID 12519916 DOI: 10.1093/Molbev/Msg015  0.696
2002 Feder ME, Bedford TB, Albright DR, Michalak P. Evolvability of Hsp70 expression under artificial election for inducible thermotolerance in independent populations of Drosophila melanogaster. Physiological and Biochemical Zoology : Pbz. 75: 325-34. PMID 12324888 DOI: 10.1086/342350  0.57
2001 Michalak P, Minkov I, Helin A, Lerman DN, Bettencourt BR, Feder ME, Korol AB, Nevo E. Genetic evidence for adaptation-driven incipient speciation of Drosophila melanogaster along a microclimatic contrast in "Evolution Canyon," Israel. Proceedings of the National Academy of Sciences of the United States of America. 98: 13195-200. PMID 11687637 DOI: 10.1073/Pnas.231478298  0.692
2000 Korol A, Rashkovetsky E, Iliadi K, Michalak P, Ronin Y, Nevo E. Nonrandom mating in Drosophila melanogaster laboratory populations derived from closely adjacent ecologically contrasting slopes at "Evolution Canyon". Proceedings of the National Academy of Sciences of the United States of America. 97: 12637-42. PMID 11050149 DOI: 10.1073/pnas.220041397  0.452
1999 Sørensen JG, Michalak P, Justesen J, Loeschcke V. Expression of the heat-shock protein HSP70 in Drosophila buzzatii lines selected for thermal resistance. Hereditas. 131: 155-64. PMID 10680297 DOI: 10.1111/J.1601-5223.1999.00155.X  0.344
1999 Michalak P, Rafiński J. Sexual isolation between two newt species, Triturus vulgaris and T. montandoni (Amphibia, Urodela, Salamandridae) Biological Journal of the Linnean Society. 67: 343-352. DOI: 10.1006/bijl.1998.0306  0.348
1998 Dahlgaard J, Loeschcke V, Michalak P, Justesen J. Induced thermotolerance and associated expression of the heat-shock protein Hsp70 in adult Drosophila melanogaster Functional Ecology. 12: 786-793. DOI: 10.1046/J.1365-2435.1998.00246.X  0.331
1997 Michalak P, Grzesik J, Rafiński J. TESTS FOR SEXUAL INCOMPATIBILITY BETWEEN TWO NEWT SPECIES, TRITURUS VULGARIS AND TRITURUS MONTANDONI: NO-CHOICE MATING DESIGN. Evolution; International Journal of Organic Evolution. 51: 2045-2050. PMID 28565101 DOI: 10.1111/j.1558-5646.1997.tb05128.x  0.356
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