Gerald J. Wyckoff - Publications

University of Missouri-Kansas City, Kansas City, MO, United States 
Evolutionary Biology, Bioinformatics

37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Jaberi-Douraki M, Meyer E, Riviere J, Gedara NIM, Kawakami J, Wyckoff GJ, Xu X. Pulmonary adverse drug event data in hypertension with implications on COVID-19 morbidity. Scientific Reports. 11: 13349. PMID 34172790 DOI: 10.1038/s41598-021-92734-7  1
2020 Stafford EG, Riviere JE, Xu X, Kawakami J, Wyckoff GJ, Jaberi-Douraki M. Pharmacovigilance in patients with diabetes: A data-driven analysis identifying specific RAS antagonists with adverse pulmonary safety profiles that have implications for COVID-19 morbidity and mortality. Journal of the American Pharmacists Association : Japha. PMID 32561317 DOI: 10.1016/J.Japh.2020.05.018  1
2020 Wilson J, Staley JM, Wyckoff GJ. Extinction of chromosomes due to specialization is a universal occurrence. Scientific Reports. 10: 2170. PMID 32034231 DOI: 10.1038/S41598-020-58997-2  1
2019 Xu X, Mazloom R, Goligerdian A, Staley J, Amini M, Wyckoff GJ, Riviere J, Jaberi-Douraki M. Making Sense of Pharmacovigilance and Drug Adverse Event Reporting: Comparative Similarity Association Analysis Using AI Machine Learning Algorithms in Dogs and Cats. Topics in Companion Animal Medicine. 37: 100366. PMID 31837760 DOI: 10.1016/J.Tcam.2019.100366  1
2019 Staley J, Mazloom R, Lowe P, Newsum CT, Jaberi-Douraki M, Riviere J, Wyckoff GJ. Novel Data Sharing Agreement to Accelerate Big Data Translational Research Projects in the One Health Sphere. Topics in Companion Animal Medicine. 37: 100367. PMID 31837758 DOI: 10.1016/J.Tcam.2019.100367  1
2019 Shortt K, Heruth DP, Zhang N, Wu W, Singh S, Li DY, Zhang LQ, Wyckoff GJ, Qi LS, Friesen CA, Ye SQ. Identification of Novel Regulatory Genes in APAP Induced Hepatocyte Toxicity by a Genome-Wide CRISPR-Cas9 Screen. Scientific Reports. 9: 1396. PMID 30718897 DOI: 10.1038/S41598-018-37940-6  0.24
2017 Zhang LQ, Van Haandel L, Xiong M, Huang P, Heruth DP, Bi C, Gaedigk R, Jiang X, Li DY, Wyckoff G, Grigoryev DN, Gao L, Li L, Wu M, Leeder JS, et al. Metabolic and molecular insights into an essential role of nicotinamide phosphoribosyltransferase. Cell Death & Disease. 8: e2705. PMID 28333140 DOI: 10.1038/cddis.2017.132  1
2017 Garcia BL, Skaff DA, Chatterjee A, Hanning A, Walker JK, Wyckoff GJ, Geisbrecht BV. Identification of C3b-Binding Small-Molecule Complement Inhibitors Using Cheminformatics. Journal of Immunology (Baltimore, Md. : 1950). PMID 28298523 DOI: 10.4049/Jimmunol.1601932  1
2017 Ren Q, Wang C, Jin M, Lan J, Ye T, Hui K, Tan J, Wang Z, Wyckoff GJ, Wang W, Han GZ. Co-option of bacteriophage lysozyme genes by bivalve genomes. Open Biology. 7. PMID 28100665 DOI: 10.1098/Rsob.160285  1
2017 Xu S, He Z, Guo Z, Zhang Z, Wyckoff GJ, Greenberg A, Wu CI, Shi S. Genome-wide convergence during evolution of mangroves from woody plants. Molecular Biology and Evolution. PMID 28087771 DOI: 10.1093/molbev/msw277  1
2016 Stroud C, Dmitriev I, Kashentseva E, Bryan JN, Curiel DT, Rindt H, Reinero C, Henry CJ, Bergman PJ, Mason NJ, Gnanandarajah JS, Engiles JB, Gray F, Laughlin D, Gaurnier-Hausser A, ... ... Wyckoff GJ, et al. A One Health overview, facilitating advances in comparative medicine and translational research. Clinical and Translational Medicine. 5: 26. PMID 27558513 DOI: 10.1186/S40169-016-0107-4  1
2016 Sabbagh U, Mullegama S, Wyckoff GJ. Identification and Evolutionary Analysis of Potential Candidate Genes in a Human Eating Disorder. Biomed Research International. 2016: 7281732. PMID 27088090 DOI: 10.1155/2016/7281732  0.52
2015 Skaff DA, McWhorter WJ, Geisbrecht BV, Wyckoff GJ, Miziorko HM. Inhibition of bacterial mevalonate diphosphate decarboxylase by eriochrome compounds. Archives of Biochemistry and Biophysics. 566: 1-6. PMID 25499551 DOI: 10.1016/J.Abb.2014.12.002  1
2014 Vannice JC, Skaff DA, Keightley A, Addo JK, Wyckoff GJ, Miziorko HM. Identification in Haloferax volcanii of phosphomevalonate decarboxylase and isopentenyl phosphate kinase as catalysts of the terminal enzyme reactions in an archaeal alternate mevalonate pathway. Journal of Bacteriology. 196: 1055-63. PMID 24375100 DOI: 10.1128/Jb.01230-13  1
2013 VanNice JC, Skaff DA, Wyckoff GJ, Miziorko HM. Expression in Haloferax volcanii of 3-hydroxy-3-methylglutaryl coenzyme A synthase facilitates isolation and characterization of the active form of a key enzyme required for polyisoprenoid cell membrane biosynthesis in halophilic archaea. Journal of Bacteriology. 195: 3854-62. PMID 23794621 DOI: 10.1128/Jb.00485-13  1
2012 Moldover B, Solidar A, Montgomery C, Miziorko H, Murphy J, Wyckoff GJ. ChemVassa: A New Method for Identifying Small Molecule Hits in Drug Discovery. The Open Medicinal Chemistry Journal. 6: 29-34. PMID 23525139 DOI: 10.2174/1874104501206010029  1
2012 O'Bleness MS, Dickens CM, Dumas LJ, Kehrer-Sawatzki H, Wyckoff GJ, Sikela JM. Evolutionary history and genome organization of DUF1220 protein domains. G3 (Bethesda, Md.). 2: 977-86. PMID 22973535 DOI: 10.1534/G3.112.003061  1
2012 Barta ML, Dickenson NE, Patil M, Keightley A, Wyckoff GJ, Picking WD, Picking WL, Geisbrecht BV. The structures of coiled-coil domains from type III secretion system translocators reveal homology to pore-forming toxins. Journal of Molecular Biology. 417: 395-405. PMID 22321794 DOI: 10.1016/J.Jmb.2012.01.026  1
2012 Zhang Q, Solidar A, Murgolo NJ, Alkema W, Ding W, Groenen PM, Greene JR, Gustafson EL, Klomp J, Norris ED, Qiu P, Wyckoff GJ. Selective constraint: A hallmark of genes successfully targeted for pharmaceutical development American Journal of Drug Discovery and Development. 2: 184-193. DOI: 10.3923/ajdd.2012.184.193  1
2011 Yang M, Wyckoff GJ. Detection of selection utilizing molecular phylogenetics: a possible approach. Genetica. 139: 639-48. PMID 21400220 DOI: 10.1007/S10709-011-9560-6  1
2010 Wyckoff GJ, Solidar A, Yoden MD. Phosphatidylinositol transfer proteins: sequence motifs in structural and evolutionary analyses. Journal of Biomedical Science and Engineering. 3: 65-77. PMID 27429707 DOI: 10.4236/jbise.2010.31010  1
2008 Abdel-Rahman SM, Talib N, Solidar A, Nopper AJ, Wyckoff GJ. Examining Trichophyton tonsurans genotype and biochemical phenotype as determinants of disease severity in tinea capitis. Medical Mycology. 46: 217-23. PMID 18404549 DOI: 10.1080/13693780701787840  1
2008 Nadeau OW, Wyckoff GJ, Paschall JE, Artigues A, Sage J, Villar MT, Carlson GM. CrossSearch, a user-friendly search engine for detecting chemically cross-linked peptides in conjugated proteins. Molecular & Cellular Proteomics : McP. 7: 739-49. PMID 18281724 DOI: 10.1074/mcp.M800020-MCP200  1
2007 Starkweather R, Barnes CS, Wyckoff GJ, Keightley JA. Virtual polymorphism: finding divergent peptide matches in mass spectrometry data. Analytical Chemistry. 79: 5030-9. PMID 17521167 DOI: 10.1021/ac0703496  1
2007 Nadeau OW, Anderson DW, Yang Q, Artigues A, Paschall JE, Wyckoff GJ, McClintock JL, Carlson GM. Evidence for the location of the allosteric activation switch in the multisubunit phosphorylase kinase complex from mass spectrometric identification of chemically crosslinked peptides. Journal of Molecular Biology. 365: 1429-45. PMID 17123541 DOI: 10.1016/j.jmb.2006.10.061  1
2006 Vallender EJ, Paschall JE, Malcom CM, Lahn BT, Wyckoff GJ. SPEED: a molecular-evolution-based database of mammalian orthologous groups. Bioinformatics (Oxford, England). 22: 2835-7. PMID 16966361 DOI: 10.1093/Bioinformatics/Btl471  1
2006 Popesco MC, Maclaren EJ, Hopkins J, Dumas L, Cox M, Meltesen L, McGavran L, Wyckoff GJ, Sikela JM. Human lineage-specific amplification, selection, and neuronal expression of DUF1220 domains. Science (New York, N.Y.). 313: 1304-7. PMID 16946073 DOI: 10.1126/Science.1127980  1
2005 Wyckoff GJ, Malcom CM, Vallender EJ, Lahn BT. A highly unexpected strong correlation between fixation probability of nonsynonymous mutations and mutation rate. Trends in Genetics : Tig. 21: 381-5. PMID 15946765 DOI: 10.1016/J.Tig.2005.05.005  1
2004 Dorus S, Vallender EJ, Evans PD, Anderson JR, Gilbert SL, Mahowald M, Wyckoff GJ, Malcom CM, Lahn BT. Accelerated evolution of nervous system genes in the origin of Homo sapiens. Cell. 119: 1027-40. PMID 15620360 DOI: 10.1016/J.Cell.2004.11.040  1
2004 Paschall JE, Oleksiak MF, VanWye JD, Roach JL, Whitehead JA, Wyckoff GJ, Kolell KJ, Crawford DL. FunnyBase: a systems level functional annotation of Fundulus ESTs for the analysis of gene expression. Bmc Genomics. 5: 96. PMID 15610557 DOI: 10.1186/1471-2164-5-96  1
2004 Dorus S, Evans PD, Wyckoff GJ, Choi SS, Lahn BT. Rate of molecular evolution of the seminal protein gene SEMG2 correlates with levels of female promiscuity. Nature Genetics. 36: 1326-9. PMID 15531881 DOI: 10.1038/Ng1471  1
2004 Tang H, Wyckoff GJ, Lu J, Wu CI. A universal evolutionary index for amino acid changes. Molecular Biology and Evolution. 21: 1548-56. PMID 15140949 DOI: 10.1093/Molbev/Msh158  1
2003 Malcom CM, Wyckoff GJ, Lahn BT. Genic mutation rates in mammals: local similarity, chromosomal heterogeneity, and X-versus-autosome disparity. Molecular Biology and Evolution. 20: 1633-41. PMID 12885971 DOI: 10.1093/Molbev/Msg178  1
2002 Wyckoff GJ, Li J, Wu CI. Molecular evolution of functional genes on the mammalian Y chromosome. Molecular Biology and Evolution. 19: 1633-6. PMID 12200491 DOI: 10.1093/Oxfordjournals.Molbev.A004226  1
2002 Fay JC, Wyckoff GJ, Wu CI. Testing the neutral theory of molecular evolution with genomic data from Drosophila. Nature. 415: 1024-6. PMID 11875569 DOI: 10.1038/4151024a  1
2001 Fay JC, Wyckoff GJ, Wu CI. Positive and negative selection on the human genome. Genetics. 158: 1227-34. PMID 11454770  1
2000 Wyckoff GJ, Wang W, Wu CI. Rapid evolution of male reproductive genes in the descent of man. Nature. 403: 304-9. PMID 10659848 DOI: 10.1038/35002070  1
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