| Year |
Citation |
Score |
| 2020 |
Duhkinova M, Crina C, Weiss R, Siciliano V. Engineering Intracellular Protein Sensors in Mammalian Cells. Journal of Visualized Experiments : Jove. PMID 32420982 DOI: 10.3791/60878 |
0.319 |
|
| 2019 |
Anderson DA, Jones RD, Arkin AP, Weiss R. Principles of synthetic biology: a MOOC for an emerging field. Synthetic Biology (Oxford, England). 4: ysz010. PMID 32995535 DOI: 10.1093/Synbio/Ysz010 |
0.309 |
|
| 2019 |
Gam JJ, DiAndreth B, Jones RD, Huh J, Weiss R. A 'poly-transfection' method for rapid, one-pot characterization and optimization of genetic systems. Nucleic Acids Research. PMID 31372658 DOI: 10.1093/Nar/Gkz623 |
0.362 |
|
| 2019 |
Wu MR, Nissim L, Stupp D, Pery E, Binder-Nissim A, Weisinger K, Enghuus C, Palacios SR, Humphrey M, Zhang Z, Maria Novoa E, Kellis M, Weiss R, Rabkin SD, Tabach Y, et al. A high-throughput screening and computation platform for identifying synthetic promoters with enhanced cell-state specificity (SPECS). Nature Communications. 10: 2880. PMID 31253799 DOI: 10.1038/S41467-019-10912-8 |
0.331 |
|
| 2019 |
Chang MM, Gaidukov L, Jung G, Tseng WA, Scarcelli JJ, Cornell R, Marshall JK, Lyles JL, Sakorafas P, Chu AA, Cote K, Tzvetkova B, Dolatshahi S, Sumit M, Mulukutla BC, ... ... Weiss R, et al. Small-molecule control of antibody N-glycosylation in engineered mammalian cells. Nature Chemical Biology. PMID 31110306 DOI: 10.1038/S41589-019-0288-4 |
0.307 |
|
| 2019 |
Teo JJY, Weiss R, Sarpeshkar R. An Artificial Tissue Homeostasis Circuit Designed via Analog Circuit Techniques. Ieee Transactions On Biomedical Circuits and Systems. PMID 30908238 DOI: 10.1109/Tbcas.2019.2907074 |
0.34 |
|
| 2018 |
Cella F, Wroblewska L, Weiss R, Siciliano V. Engineering protein-protein devices for multilayered regulation of mRNA translation using orthogonal proteases in mammalian cells. Nature Communications. 9: 4392. PMID 30349044 DOI: 10.1038/S41467-018-06825-7 |
0.347 |
|
| 2018 |
Wagner TE, Becraft JR, Bodner K, Teague B, Zhang X, Woo A, Porter E, Alburquerque B, Dobosh B, Andries O, Sanders NN, Beal J, Densmore D, Kitada T, Weiss R. Small-molecule-based regulation of RNA-delivered circuits in mammalian cells. Nature Chemical Biology. 14: 1043-1050. PMID 30327560 DOI: 10.1038/S41589-018-0146-9 |
0.338 |
|
| 2018 |
Tordoff J, Weiss R. Self-organizing multicellular structures designed using synthetic biology. Nature. 559: 184-185. PMID 29988052 DOI: 10.1038/D41586-018-05564-5 |
0.325 |
|
| 2018 |
Gaidukov L, Wroblewska L, Teague B, Nelson T, Zhang X, Liu Y, Jagtap K, Mamo S, Tseng WA, Lowe A, Das J, Bandara K, Baijuraj S, Summers NM, Lu TK, ... ... Weiss R, et al. A multi-landing pad DNA integration platform for mammalian cell engineering. Nucleic Acids Research. PMID 29617873 DOI: 10.1093/Nar/Gky216 |
0.315 |
|
| 2018 |
Kitada T, DiAndreth B, Teague B, Weiss R. Programming gene and engineered-cell therapies with synthetic biology. Science (New York, N.Y.). 359. PMID 29439214 DOI: 10.1126/Science.Aad1067 |
0.315 |
|
| 2017 |
Li Y, Weiss R. A Modular Approach to Building Complex Synthetic Circuits. Methods in Molecular Biology (Clifton, N.J.). 1651: 231-248. PMID 28801911 DOI: 10.1007/978-1-4939-7223-4_17 |
0.342 |
|
| 2017 |
Kong DS, Thorsen TA, Babb J, Wick ST, Gam JJ, Weiss R, Carr PA. Open-source, community-driven microfluidics with Metafluidics. Nature Biotechnology. 35: 523-529. PMID 28591125 DOI: 10.1038/Nbt.3873 |
0.314 |
|
| 2017 |
Inniss MC, Bandara K, Jusiak B, Lu TK, Weiss R, Wroblewska L, Zhang L. A novel Bxb1 integrase RMCE system for high fidelity site-specific integration of mAb expression cassette in CHO cells. Biotechnology and Bioengineering. PMID 28186334 DOI: 10.1002/Bit.26268 |
0.324 |
|
| 2017 |
Sainath TN, Weiss RJ, Wilson KW, Li B, Narayanan A, Variani E, Bacchiani M, Shafran I, Senior A, Chin K, Misra A, Kim C. Multichannel Signal Processing With Deep Neural Networks for Automatic Speech Recognition Ieee/Acm Transactions On Audio, Speech, and Language Processing. 25: 965-979. DOI: 10.1109/Taslp.2017.2672401 |
0.305 |
|
| 2016 |
Guye P, Ebrahimkhani MR, Kipniss N, Velazquez JJ, Schoenfeld E, Kiani S, Griffith LG, Weiss R. Genetically engineering self-organization of human pluripotent stem cells into a liver bud-like tissue using Gata6. Nature Communications. 7: 10243. PMID 26732624 DOI: 10.1038/Ncomms10243 |
0.319 |
|
| 2015 |
Kiani S, Chavez A, Tuttle M, Hall RN, Chari R, Ter-Ovanesyan D, Qian J, Pruitt BW, Beal J, Vora S, Buchthal J, Kowal EJ, Ebrahimkhani MR, Collins JJ, Weiss R, et al. Cas9 gRNA engineering for genome editing, activation and repression. Nature Methods. 12: 1051-4. PMID 26344044 DOI: 10.1038/Nmeth.3580 |
0.307 |
|
| 2015 |
Teague BP, Weiss R. SYNTHETIC BIOLOGY. Synthetic communities, the sum of parts. Science (New York, N.Y.). 349: 924-5. PMID 26315419 DOI: 10.1126/Science.Aad0876 |
0.343 |
|
| 2015 |
Gyorgy A, Jiménez JI, Yazbek J, Huang HH, Chung H, Weiss R, Del Vecchio D. Isocost Lines Describe the Cellular Economy of Genetic Circuits. Biophysical Journal. 109: 639-46. PMID 26244745 DOI: 10.1016/J.Bpj.2015.06.034 |
0.341 |
|
| 2015 |
Wroblewska L, Kitada T, Endo K, Siciliano V, Stillo B, Saito H, Weiss R. Mammalian synthetic circuits with RNA binding proteins for RNA-only delivery. Nature Biotechnology. 33: 839-41. PMID 26237515 DOI: 10.1038/Nbt.3301 |
0.307 |
|
| 2015 |
Li Y, Jiang Y, Chen H, Liao W, Li Z, Weiss R, Xie Z. Modular construction of mammalian gene circuits using TALE transcriptional repressors. Nature Chemical Biology. 11: 207-13. PMID 25643171 DOI: 10.1038/Nchembio.1736 |
0.368 |
|
| 2015 |
Davidsohn N, Beal J, Kiani S, Adler A, Yaman F, Li Y, Xie Z, Weiss R. Accurate Predictions of Genetic Circuit Behavior from Part Characterization and Modular Composition. Acs Synthetic Biology. 4: 673-81. PMID 25369267 DOI: 10.1021/Sb500263B |
0.371 |
|
| 2015 |
Beal J, Wagner TE, Kitada T, Azizgolshani O, Parker JM, Densmore D, Weiss R. Model-driven engineering of gene expression from RNA replicons. Acs Synthetic Biology. 4: 48-56. PMID 24877739 DOI: 10.1021/Sb500173F |
0.329 |
|
| 2014 |
Duportet X, Wroblewska L, Guye P, Li Y, Eyquem J, Rieders J, Rimchala T, Batt G, Weiss R. A platform for rapid prototyping of synthetic gene networks in mammalian cells. Nucleic Acids Research. 42: 13440-51. PMID 25378321 DOI: 10.1093/Nar/Gku1082 |
0.364 |
|
| 2014 |
Stanton BC, Siciliano V, Ghodasara A, Wroblewska L, Clancy K, Trefzer AC, Chesnut JD, Weiss R, Voigt CA. Systematic transfer of prokaryotic sensors and circuits to mammalian cells. Acs Synthetic Biology. 3: 880-91. PMID 25360681 DOI: 10.1021/Sb5002856 |
0.348 |
|
| 2014 |
Collins JJ, Maxon M, Ellington A, Fussenegger M, Weiss R, Sauro H. Synthetic biology: How best to build a cell. Nature. 509: 155-7. PMID 24812682 DOI: 10.1038/509155A |
0.309 |
|
| 2014 |
Kiani S, Beal J, Ebrahimkhani MR, Huh J, Hall RN, Xie Z, Li Y, Weiss R. CRISPR transcriptional repression devices and layered circuits in mammalian cells. Nature Methods. 11: 723-6. PMID 24797424 DOI: 10.1038/Nmeth.2969 |
0.333 |
|
| 2014 |
Church GM, Elowitz MB, Smolke CD, Voigt CA, Weiss R. Realizing the potential of synthetic biology. Nature Reviews. Molecular Cell Biology. 15: 289-94. PMID 24622617 DOI: 10.1038/Nrm3767 |
0.303 |
|
| 2014 |
Xie Z, Wroblewska L, Weiss R. RNAi Synthetic Logic Circuits for Sensing, Information Processing, and Actuation Reviews in Cell Biology and Molecular Medicine. 1-23. DOI: 10.1002/3527600906.Mcb.20130003 |
0.352 |
|
| 2013 |
Guye P, Li Y, Wroblewska L, Duportet X, Weiss R. Rapid, modular and reliable construction of complex mammalian gene circuits. Nucleic Acids Research. 41: e156. PMID 23847100 DOI: 10.1093/Nar/Gkt605 |
0.377 |
|
| 2013 |
Weiss R. Synthetic Biology: From Parts to Modules to Therapeutic Systems Biophysical Journal. 104. DOI: 10.1016/J.Bpj.2012.11.2952 |
0.394 |
|
| 2012 |
Beal J, Weiss R, Densmore D, Adler A, Appleton E, Babb J, Bhatia S, Davidsohn N, Haddock T, Loyall J, Schantz R, Vasilev V, Yaman F. An end-to-end workflow for engineering of biological networks from high-level specifications. Acs Synthetic Biology. 1: 317-31. PMID 23651286 DOI: 10.1021/Sb300030D |
0.316 |
|
| 2012 |
Miller M, Hafner M, Sontag E, Davidsohn N, Subramanian S, Purnick PE, Lauffenburger D, Weiss R. Modular design of artificial tissue homeostasis: robust control through synthetic cellular heterogeneity. Plos Computational Biology. 8: e1002579. PMID 22829755 DOI: 10.1371/Journal.Pcbi.1002579 |
0.391 |
|
| 2012 |
Slusarczyk AL, Lin A, Weiss R. Foundations for the design and implementation of synthetic genetic circuits. Nature Reviews. Genetics. 13: 406-20. PMID 22596318 DOI: 10.1038/Nrg3227 |
0.352 |
|
| 2012 |
Slusarczyk AL, Weiss R. Understanding signaling dynamics through synthesis. Science Signaling. 5: pe16. PMID 22510466 DOI: 10.1126/Scisignal.2003092 |
0.324 |
|
| 2012 |
Silver PA, Haynes K, Weiss R. Synthetic meets cell biology Molecular Biology of the Cell. 23: 967. DOI: 10.1091/Mbc.E11-12-0978 |
0.391 |
|
| 2011 |
Xie Z, Wroblewska L, Prochazka L, Weiss R, Benenson Y. Multi-input RNAi-based logic circuit for identification of specific cancer cells. Science (New York, N.Y.). 333: 1307-11. PMID 21885784 DOI: 10.1126/Science.1205527 |
0.375 |
|
| 2011 |
Beal J, Lu T, Weiss R. Automatic compilation from high-level biologically-oriented programming language to genetic regulatory networks. Plos One. 6: e22490. PMID 21850228 DOI: 10.1371/Journal.Pone.0022490 |
0.347 |
|
| 2011 |
Randall A, Guye P, Gupta S, Duportet X, Weiss R. Design and connection of robust genetic circuits. Methods in Enzymology. 497: 159-86. PMID 21601086 DOI: 10.1016/B978-0-12-385075-1.00007-X |
0.345 |
|
| 2011 |
Bertin-Mahieux T, Grindlay G, Weiss RJ, Ellis DPW. Evaluating music sequence models through missing data Icassp, Ieee International Conference On Acoustics, Speech and Signal Processing - Proceedings. 177-180. DOI: 10.1109/ICASSP.2011.5946369 |
0.685 |
|
| 2011 |
Weiss RJ, Mandel MI, Ellis DPW. Combining localization cues and source model constraints for binaural source separation Speech Communication. 53: 606-621. DOI: 10.1016/J.Specom.2011.01.003 |
0.3 |
|
| 2010 |
Mandel MI, Weiss RJ, Ellis D. Model-Based Expectation-Maximization Source Separation and Localization Ieee Transactions On Audio, Speech, and Language Processing. 18: 382-394. DOI: 10.1109/Tasl.2009.2029711 |
0.534 |
|
| 2010 |
Weiss RJ, Ellis DPW. Speech separation using speaker-adapted eigenvoice speech models Computer Speech and Language. 24: 16-29. DOI: 10.1016/J.Csl.2008.03.003 |
0.303 |
|
| 2008 |
Lu T, Ferry M, Weiss R, Hasty J. A molecular noise generator. Physical Biology. 5: 036006. PMID 18698117 DOI: 10.1088/1478-3975/5/3/036006 |
0.331 |
|
| 2008 |
Batt G, Belta C, Weiss R. Temporal Logic Analysis of Gene Networks Under Parameter Uncertainty Ieee Transactions On Automatic Control. 53: 215-229. DOI: 10.1109/Tac.2007.911330 |
0.313 |
|
| 2007 |
Dhar PK, Weiss R. Enabling the new biology of the 21(st) century. Systems and Synthetic Biology. 1: 1-2. PMID 19003432 DOI: 10.1007/S11693-006-9000-6 |
0.372 |
|
| 2007 |
Batt G, Yordanov B, Weiss R, Belta C. Robustness analysis and tuning of synthetic gene networks. Bioinformatics (Oxford, England). 23: 2415-22. PMID 17660209 DOI: 10.1093/Bioinformatics/Btm362 |
0.317 |
|
| 2007 |
Rinaudo K, Bleris L, Maddamsetti R, Subramanian S, Weiss R, Benenson Y. A universal RNAi-based logic evaluator that operates in mammalian cells. Nature Biotechnology. 25: 795-801. PMID 17515909 DOI: 10.1038/Nbt1307 |
0.337 |
|
| 2006 |
Andrianantoandro E, Basu S, Karig DK, Weiss R. Synthetic biology: new engineering rules for an emerging discipline. Molecular Systems Biology. 2: 2006.0028. PMID 16738572 DOI: 10.1038/Msb4100073 |
0.352 |
|
| 2005 |
Chen MT, Weiss R. Artificial cell-cell communication in yeast Saccharomyces cerevisiae using signaling elements from Arabidopsis thaliana. Nature Biotechnology. 23: 1551-5. PMID 16299520 DOI: 10.1038/Nbt1162 |
0.374 |
|
| 2005 |
McDaniel R, Weiss R. Advances in synthetic biology: on the path from prototypes to applications. Current Opinion in Biotechnology. 16: 476-83. PMID 16019200 DOI: 10.1016/J.Copbio.2005.07.002 |
0.359 |
|
| 2005 |
Basu S, Gerchman Y, Collins CH, Arnold FH, Weiss R. A synthetic multicellular system for programmed pattern formation. Nature. 434: 1130-4. PMID 15858574 DOI: 10.1038/Nature03461 |
0.361 |
|
| 2005 |
Hooshangi S, Thiberge S, Weiss R. Ultrasensitivity and noise propagation in a synthetic transcriptional cascade. Proceedings of the National Academy of Sciences of the United States of America. 102: 3581-6. PMID 15738412 DOI: 10.1073/Pnas.0408507102 |
0.32 |
|
| 2005 |
Karig D, Weiss R. Signal-amplifying genetic circuit enables in vivo observation of weak promoter activation in the Rhl quorum sensing system. Biotechnology and Bioengineering. 89: 709-18. PMID 15641095 DOI: 10.1002/Bit.20371 |
0.33 |
|
| 2004 |
Feng XJ, Hooshangi S, Chen D, Li G, Weiss R, Rabitz H. Optimizing genetic circuits by global sensitivity analysis. Biophysical Journal. 87: 2195-202. PMID 15454422 DOI: 10.1529/Biophysj.104.044131 |
0.315 |
|
| 2004 |
Basu S, Mehreja R, Thiberge S, Chen MT, Weiss R. Spatiotemporal control of gene expression with pulse-generating networks. Proceedings of the National Academy of Sciences of the United States of America. 101: 6355-60. PMID 15096621 DOI: 10.1073/Pnas.0307571101 |
0.363 |
|
| 2004 |
You L, Cox RS, Weiss R, Arnold FH. Programmed population control by cell-cell communication and regulated killing. Nature. 428: 868-71. PMID 15064770 DOI: 10.1038/Nature02491 |
0.363 |
|
| 2004 |
Gerchman Y, Weiss R. Teaching bacteria a new language. Proceedings of the National Academy of Sciences of the United States of America. 101: 2221-2. PMID 14982990 DOI: 10.1073/Pnas.0400473101 |
0.378 |
|
| 2003 |
YOKOBAYASHI Y, COLLINS CH, LEADBETTER JR, ARNOLD FH, WEISS R. EVOLUTIONARY DESIGN OF GENETIC CIRCUITS AND CELL-CELL COMMUNICATIONS Advances in Complex Systems. 6: 37-45. DOI: 10.1142/S0219525903000700 |
0.389 |
|
| 2003 |
Basu S, Karig D, Weiss R. Engineering signal processing in cells: Towards molecular concentration band detection Natural Computing. 2: 463-478. DOI: 10.1023/B:Naco.0000006774.27778.F0 |
0.331 |
|
| 2003 |
Weiss R, Basu S, Hooshangi S, Kalmbach A, Karig D, Mehreja R, Netravali I. Genetic circuit building blocks for cellular computation, communications, and signal processing Natural Computing. 2: 47-84. DOI: 10.1023/A:1023307812034 |
0.388 |
|
| 2002 |
Yokobayashi Y, Weiss R, Arnold FH. Directed evolution of a genetic circuit. Proceedings of the National Academy of Sciences of the United States of America. 99: 16587-91. PMID 12451174 DOI: 10.1073/Pnas.252535999 |
0.379 |
|
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