David K Jacobs - Publications

Affiliations: 
Ecology and Evolutionary Biology University of California, Los Angeles, Los Angeles, CA 
Area:
Evolution/Development of Invertebrate Body Plans, Paleobiology and Marine Speciation
Website:
https://www.ioes.ucla.edu/person/david-jacobs/

79 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Gold DA, Lau CLF, Fuong H, Kao G, Hartenstein V, Jacobs DK. Mechanisms of cnidocyte development in the moon jellyfish Aurelia. Evolution & Development. PMID 30623570 DOI: 10.1111/ede.12278  0.56
2018 Gold DA, Katsuki T, Li Y, Yan X, Regulski M, Ibberson D, Holstein T, Steele RE, Jacobs DK, Greenspan RJ. The genome of the jellyfish Aurelia and the evolution of animal complexity. Nature Ecology & Evolution. PMID 30510179 DOI: 10.1038/s41559-018-0719-8  0.56
2018 Dolby GA, Ellingson RA, Findley LT, Jacobs DK. How sea-level change mediates genetic divergence in coastal species across regions with varying tectonic and sediment processes. Molecular Ecology. PMID 29336083 DOI: 10.1111/mec.14487  0.64
2017 Buckner JC, Ellingson R, Gold DA, Jones TL, Jacobs DK. Mitogenomics supports an unexpected taxonomic relationship for the extinct diving duck Chendytes lawi and definitively places the extinct Labrador Duck. Molecular Phylogenetics and Evolution. PMID 29247849 DOI: 10.1016/j.ympev.2017.12.008  0.56
2016 Dolby GA, Hechinger R, Ellingson RA, Findley LT, Lorda J, Jacobs DK. Sea-level driven glacial-age refugia and post-glacial mixing on subtropical coasts, a palaeohabitat and genetic study. Proceedings. Biological Sciences. 283. PMID 27903870 DOI: 10.1098/rspb.2016.1571  0.64
2016 Gold DA, Nakanishi N, Hensley NM, Hartenstein V, Jacobs DK. Cell tracking supports secondary gastrulation in the moon jellyfish Aurelia. Development Genes and Evolution. PMID 27535146 DOI: 10.1007/s00427-016-0559-y  1
2016 Swift CC, Spies B, Ellingson RA, Jacobs DK. A New Species of the Bay Goby Genus Eucyclogobius, Endemic to Southern California: Evolution, Conservation, and Decline. Plos One. 11: e0158543. PMID 27462700 DOI: 10.1371/journal.pone.0158543  0.64
2015 Gold DA, Runnegar B, Gehling JG, Jacobs DK. Ancestral state reconstruction of ontogeny supports a bilaterian affinity for Dickinsonia. Evolution & Development. 17: 315-24. PMID 26492825 DOI: 10.1111/ede.12168  1
2015 Kinziger AP, Hellmair M, McCraney WT, Jacobs DK, Goldsmith G. Temporal genetic analysis of the endangered tidewater goby: extinction-colonization dynamics or drift in isolation? Molecular Ecology. PMID 26460923 DOI: 10.1111/mec.13424  1
2015 Gold DA, Nakanishi N, Hensley NM, Cozzolino K, Tabatabaee M, Martin M, Hartenstein V, Jacobs DK. Structural and Developmental Disparity in the Tentacles of the Moon Jellyfish Aurelia sp.1. Plos One. 10: e0134741. PMID 26241309 DOI: 10.1371/journal.pone.0134741  1
2015 Nakanishi N, Camara AC, Yuan DC, Gold DA, Jacobs DK. Gene Expression Data from the Moon Jelly, Aurelia, Provide Insights into the Evolution of the Combinatorial Code Controlling Animal Sense Organ Development. Plos One. 10: e0132544. PMID 26225420 DOI: 10.1371/journal.pone.0132544  1
2014 Gold DA, Gates RD, Jacobs DK. The early expansion and evolutionary dynamics of POU class genes. Molecular Biology and Evolution. 31: 3136-47. PMID 25261405 DOI: 10.1093/molbev/msu243  1
2014 Gold DA, Robinson J, Farrell AB, Harris JM, Thalmann O, Jacobs DK. Attempted DNA extraction from a Rancho La Brea Columbian mammoth (Mammuthus columbi): prospects for ancient DNA from asphalt deposits. Ecology and Evolution. 4: 329-36. PMID 24634719 DOI: 10.1002/ece3.928  1
2014 Ghisalberti M, Gold DA, Laflamme M, Clapham ME, Narbonne GM, Summons RE, Johnston DT, Jacobs DK. Canopy flow analysis reveals the advantage of size in the oldest communities of multicellular eukaryotes. Current Biology : Cb. 24: 305-9. PMID 24462003 DOI: 10.1016/j.cub.2013.12.017  1
2014 Ellingson RA, Swift CC, Findley LT, Jacobs DK. Convergent evolution of ecomorphological adaptations in geographically isolated Bay gobies (Teleostei: Gobionellidae) of the temperate North Pacific. Molecular Phylogenetics and Evolution. 70: 464-77. PMID 24148989 DOI: 10.1016/j.ympev.2013.10.009  1
2014 Richmond JQ, Jacobs DK, Backlin AR, Swift CC, Dellith C, Fisher RN. Ephemeral stream reaches preserve the evolutionary and distributional history of threespine stickleback in the Santa Clara and Ventura River watersheds of southern California Conservation Genetics. DOI: 10.1007/s10592-014-0643-7  1
2013 Hartenstein V, Jacobs D. Developmental plasticity, straight from the worm's mouth. Cell. 155: 742-3. PMID 24209614 DOI: 10.1016/j.cell.2013.10.038  1
2013 Thomassen HA, Freedman AH, Brown DM, Buermann W, Jacobs DK. Regional differences in seasonal timing of rainfall discriminate between genetically distinct East African giraffe taxa. Plos One. 8: e77191. PMID 24194870 DOI: 10.1371/journal.pone.0077191  1
2013 Winchell CJ, Jacobs DK. Expression of the Lhx genes apterous and lim1 in an errant polychaete: implications for bilaterian appendage evolution, neural development, and muscle diversification. Evodevo. 4: 4. PMID 23369627 DOI: 10.1186/2041-9139-4-4  1
2013 Gold DA, Jacobs DK. Stem cell dynamics in Cnidaria: are there unifying principles? Development Genes and Evolution. 223: 53-66. PMID 23179637 DOI: 10.1007/s00427-012-0429-1  1
2012 Miura O, Torchin ME, Bermingham E, Jacobs DK, Hechinger RF. Flying shells: historical dispersal of marine snails across Central America. Proceedings. Biological Sciences / the Royal Society. 279: 1061-7. PMID 21920976 DOI: 10.1098/rspb.2011.1599  1
2011 Swift CC, Findley LT, Ellingson RA, Flessa KW, Jacobs DK. The delta mudsucker, gillichthys detrusus, a valid species (Teleostei: Gobiidae) endemic to the colorado river delta, Northernmost gulf of California, Mexico Copeia. 93-102. DOI: 10.1643/CI-09-123  1
2010 Schinske JN, Bernardi G, Jacobs DK, Routman EJ. Phylogeography of the diamond turbot (Hypsopsetta guttulata) across the Baja California Peninsula. Marine Biology. 157: 123-134. PMID 24391239 DOI: 10.1007/s00227-009-1302-2  1
2010 Winchell CJ, Valencia JE, Jacobs DK. Expression of Distal-less, dachshund, and optomotor blind in Neanthes arenaceodentata (Annelida, Nereididae) does not support homology of appendage-forming mechanisms across the Bilateria. Development Genes and Evolution. 220: 275-95. PMID 21116826 DOI: 10.1007/s00427-010-0346-0  1
2010 McCraney WT, Goldsmith G, Jacobs DK, Kinziger AP. Rampant drift in artificially fragmented populations of the endangered tidewater goby (Eucyclogobius newberryi) Molecular Ecology. 19: 3315-3327. PMID 20666998 DOI: 10.1111/j.1365-294X.2010.04755.x  1
2010 Nakanishi N, Yuan D, Hartenstein V, Jacobs DK. Evolutionary origin of rhopalia: insights from cellular-level analyses of Otx and POU expression patterns in the developing rhopalial nervous system. Evolution & Development. 12: 404-15. PMID 20618436 DOI: 10.1111/j.1525-142X.2010.00427.x  1
2010 Winchell CJ, Valencia JE, Jacobs DK. Confocal analysis of nervous system architecture in direct-developing juveniles of Neanthes arenaceodentata (Annelida, Nereididae). Frontiers in Zoology. 7: 17. PMID 20553614 DOI: 10.1186/1742-9994-7-17  1
2010 Earl DA, Louie KD, Bardeleben C, Swift CC, Jacobs DK. Rangewide microsatellite phylogeography of the endangered tidewater goby, Eucyclogobius newberryi (Teleostei: Gobiidae), a genetically subdivided coastal fish with limited marine dispersal Conservation Genetics. 11: 103-114. DOI: 10.1007/s10592-009-0008-9  1
2009 Marshall CR, Jacobs DK. Paleontology. Flourishing after the end-Permian mass extinction. Science (New York, N.Y.). 325: 1079-80. PMID 19713513 DOI: 10.1126/science.1178325  1
2009 Nakanishi N, Hartenstein V, Jacobs DK. Development of the rhopalial nervous system in Aurelia sp.1 (Cnidaria, Scyphozoa). Development Genes and Evolution. 219: 301-17. PMID 19543911 DOI: 10.1007/s00427-009-0291-y  1
2009 Davis GK, Dietrich MR, Jacobs DK. Homeotic mutants and the assimilation of developmental genetics into the evolutionary synthesis, 1915-1952 Transactions of the American Philosophical Society. 99: 133-154.  1
2008 Yuan D, Nakanishi N, Jacobs DK, Hartenstein V. Embryonic development and metamorphosis of the scyphozoan Aurelia. Development Genes and Evolution. 218: 525-39. PMID 18850238 DOI: 10.1007/s00427-008-0254-8  1
2008 Nakanishi N, Yuan D, Jacobs DK, Hartenstein V. Early development, pattern, and reorganization of the planula nervous system in Aurelia (Cnidaria, Scyphozoa). Development Genes and Evolution. 218: 511-24. PMID 18850237 DOI: 10.1007/s00427-008-0239-7  1
2007 Jacobs DK, Nakanishi N, Yuan D, Camara A, Nichols SA, Hartenstein V. Evolution of sensory structures in basal metazoa. Integrative and Comparative Biology. 47: 712-23. PMID 21669752 DOI: 10.1093/icb/icm094  1
2007 Brown DM, Brenneman RA, Koepfli KP, Pollinger JP, Milá B, Georgiadis NJ, Louis EE, Grether GF, Jacobs DK, Wayne RK. Extensive population genetic structure in the giraffe. Bmc Biology. 5: 57. PMID 18154651 DOI: 10.1186/1741-7007-5-57  1
2007 Jacobs DK. Buoyancy, Hydrodynamics, and Structure in Chambered Cephalopods Palaeobiology Ii. 397-401. DOI: 10.1002/9780470999295ch.94  1
2006 Morris J, Ladurner P, Rieger R, Pfister D, Del Mar De Miguel-Bonet M, Jacobs D, Hartenstein V. The Macrostomum lignano EST database as a molecular resource for studying platyhelminth development and phylogeny. Development Genes and Evolution. 216: 695-707. PMID 17021863 DOI: 10.1007/s00427-006-0098-z  1
2005 Jacobs DK, Hughes NC, Fitz-Gibbon ST, Winchell CJ. Terminal addition, the Cambrian radiation and the Phanerozoic evolution of bilaterian form. Evolution & Development. 7: 498-514. PMID 16336405 DOI: 10.1111/j.1525-142X.2005.05055.x  1
2005 Hughes NC, Jacobs DK. The end of everything: metazoan terminal addition. Evolution & Development. 7: 497. PMID 16336404 DOI: 10.1111/j.1525-142X.2005.05054.x  1
2004 Bebenek IG, Gates RD, Morris J, Hartenstein V, Jacobs DK. sine oculis in basal Metazoa. Development Genes and Evolution. 214: 342-51. PMID 15221378 DOI: 10.1007/s00427-004-0407-3  1
2004 Jacobs DK, Haney TA, Louie KD. Genes, diversity, and geologic process on the Pacific Coast Annual Review of Earth and Planetary Sciences. 32: 601-652. DOI: 10.1146/annurev.earth.32.092203.122436  1
2004 Ahnelt H, Göschl J, Dawson MN, Jacobs DK. Geographical variation in the cephalic lateral line canals of Eucyclogobius newberryi (Teleostei, Gobiidae) and its comparison with molecular phylogeography Folia Zoologica. 53: 385-398.  1
2003 Jacobs DK, Gates RD. Developmental genes and the reconstruction of metazoan evolution--implications of evolutionary loss, limits on inference of ancestry and type 2 errors. Integrative and Comparative Biology. 43: 11-8. PMID 21680405 DOI: 10.1093/icb/43.1.11  0.4
2003 Lee SE, Gates RD, Jacobs DK. Gene fishing: the use of a simple protocol to isolate multiple homeodomain classes from diverse invertebrate taxa. Journal of Molecular Evolution. 56: 509-16. PMID 12718333 DOI: 10.1007/s00239-002-2421-2  1
2003 Holland ND, Venkatesh TV, Holland LZ, Jacobs DK, Bodmer R. AmphiNk2-tin, an amphioxus homeobox gene expressed in myocardial progenitors: insights into evolution of the vertebrate heart. Developmental Biology. 255: 128-37. PMID 12618138 DOI: 10.1016/S0012-1606(02)00050-7  1
2003 Jacobs DK, Gates RD. Developmental genes and the reconstruction of metazoan evolution - Implications of evolutionary loss, limits on inference of ancestry and type 2 errors Integrative and Comparative Biology. 43: 11-18.  1
2002 Dawson MN, Louie KD, Barlow M, Jacobs DK, Swift CC. Comparative phylogeography of sympatric sister species, Clevelandia ios and Eucyclogobius newberryi (Teleostei, Gobiidae), across the California Transition Zone. Molecular Ecology. 11: 1065-75. PMID 12030983 DOI: 10.1046/j.1365-294X.2002.01503.x  1
2002 Ramachandra NB, Gates RD, Ladurner P, Jacobs DK, Hartenstein V. Embryonic development in the primitive bilaterian Neochildia fusca: normal morphogenesis and isolation of POU genes Brn-1 and Brn-3. Development Genes and Evolution. 212: 55-69. PMID 11914937 DOI: 10.1007/s00427-001-0207-y  1
2002 Jacobs DK. Conservation genetics of the tidewater Goby-Eucyclogobius newberri Report - University of California Water Resources Center. 31-33.  1
2002 Jacobs D. Conservation genetics of the tidewater goby-eucyclogobius newberryi Report - University of California Water Resources Center. 51-52.  1
2001 Lee SE, Gates RD, Jacobs DK. The isolation of a Distal-less gene fragment from two molluscs. Development Genes and Evolution. 211: 506-8. PMID 11702201 DOI: 10.1007/s00427-001-0184-1  1
2001 Dawson MN, Staton JL, Jacobs DK. Phylogeography of the tidewater goby, Eucyclogobius newberryi (Teleostei, Gobiidae), in coastal California. Evolution; International Journal of Organic Evolution. 55: 1167-79. PMID 11475052  1
2001 Alroy J, Marshall CR, Bambach RK, Bezusko K, Foote M, Fursich FT, Hansen TA, Holland SM, Ivany LC, Jablonski D, Jacobs DK, Jones DC, Kosnik MA, Lidgard S, Low S, et al. Effects of sampling standardization on estimates of Phanerozoic marine diversification. Proceedings of the National Academy of Sciences of the United States of America. 98: 6261-6. PMID 11353852 DOI: 10.1073/pnas.111144698  1
2001 Dawson MN, Jacobs DK. Molecular evidence for cryptic species of Aurelia aurita (Cnidaria, Scyphozoa). The Biological Bulletin. 200: 92-6. PMID 11249217  1
2001 Fantz DA, Jacobs D, Glossip D, Kornfeld K. Docking Sites on Substrate Proteins Direct Extracellular Signal-regulated Kinase to Phosphorylate Specific Residues Journal of Biological Chemistry. 276: 27256-27265. DOI: 10.1074/jbc.M102512200  1
2000 Jacobs DK, Wray CG, Wedeen CJ, Kostriken R, DeSalle R, Staton JL, Gates RD, Lindberg DR. Molluscan engrailed expression, serial organization, and shell evolution. Evolution & Development. 2: 340-7. PMID 11256378 DOI: 10.1046/j.1525-142X.2000.00077.x  1
2000 Schubert M, Holland LZ, Holland ND, Jacobs DK. A phylogenetic tree of the Wnt genes based on all available full-length sequences, including five from the cephalochordate amphioxus Molecular Biology and Evolution. 17: 1896-1903. PMID 11110906  1
1999 Lee SE, Jacobs DK. Expression of Distal-less in molluscan eggs, embryos, and larvae. Evolution & Development. 1: 172-9. PMID 11324102  1
1999 Jacobs D, Glossip D, Xing H, Muslin AJ, Kornfeld K. Multiple docking sites on substrate proteins form a modular system that mediates recognition by ERK MAP kinase Genes and Development. 13: 163-175. PMID 9925641  1
1998 Dawson MN, Raskoff KA, Jacobs DK. Field preservation of marine invertebrate tissue for DNA analyses. Molecular Marine Biology and Biotechnology. 7: 145-52. PMID 11541322  1
1998 Jacobs DK, Lindberg DR. Oxygen and evolutionary patterns in the sea: onshore/offshore trends and recent recruitment of deep-sea faunas. Proceedings of the National Academy of Sciences of the United States of America. 95: 9396-401. PMID 11541238 DOI: 10.1073/pnas.95.16.9396  1
1998 Jacobs D, Beitel GJ, Clark SG, Horvitz HR, Kornfeld K. Gain-of-function mutations in the Caenorhabditis elegans lin-1 ETS gene identify a C-terminal regulatory domain phosphorylated by ERK MAP kinase. Genetics. 149: 1809-22. PMID 9691039  1
1996 Agosti D, Jacobs D, DeSalle R. On combining protein sequences and nucleic acid sequences in phylogenetic analysis: The homeobox protein case Cladistics. 12: 65-82. PMID 11541749 DOI: 10.1006/clad.1996.0005  1
1996 Jacobs DK. Chambered cephalopod shells, buoyancy, structure and decoupling: History and red herrings Palaios. 11: 610-614.  1
1995 Wray CG, Jacobs DK, Kostriken R, Vogler AP, Baker R, DeSalle R. Homologues of the engrailed gene from five molluscan classes Febs Letters. 365: 71-74. PMID 7774719 DOI: 10.1016/0014-5793(95)00372-G  1
1995 Jacobs DK, Sahagian DL. Milankovitch fluctuations in sea level and recent trends in sea- level change: ice may not always be the answer Sequence Stratigraphy and Depositional Response to Eustatic, Tectonic and Climatic Forcing. 329-366.  1
1994 Jacobs DK. Developmental genes and the origin and evolution of Metazoa Exs. 69: 537-549. PMID 11536652  1
1994 Jacobs DK, Landman NH, Chamberlain JA. Ammonite shell shape covaries with facies and hydrodynamics: iterative evolution as a response to changes in basinal environment Geology. 22: 905-908. DOI: 10.1130/0091-7613(1994)022<0905:ASSCWF>2.3.CO;2  1
1994 Sahagian DL, Jacobs DK, Schwartz FW. Man-made lakes and sea-level rise [14] Nature. 370: 258.  1
1994 Sahagian DL, Schwartz FW, Jacobs DK. Direct anthropogenic contributions to sea level rise in the twentieth century Nature. 367: 54-57.  1
1994 Sahagian DL, Jacobs DK, Schwartz FW. Sea-level rise [9] Nature. 369: 616.  1
1994 Greuell W, Sahagian DL, Jacobs DK, Schwartz FW. Sea-level rise [8] Nature. 369: 615-616.  1
1994 Chao BF, Rodenburg E, Sahaglan DL, Jacobs DK, Schwartz FW. Man-made lakes and sea-level rise [11] Nature. 370: 258.  1
1993 Jacobs DK, Sahagian DL. Climate-induced fluctuations in sea level during non-glacial times Nature. 361: 710-712.  1
1993 Jacobs DK, Landman NH. Nautilus - a poor model for the function and behavior of ammonoids? Lethaia. 26: 101-111.  1
1992 Jones DS, Jacobs DK. Photosymbiosis in Clinocardium nuttalli: implications for tests of photosymbiosis in fossil molluscs Palaios. 7: 86-95. DOI: 10.2307/3514798  1
1992 Jacobs DK. Shape, drag, and power in ammonoid swimming Paleobiology. 18: 203-220.  1
1990 Jacobs DK. Selector genes and the Cambrian radiation of Bilateria Proceedings of the National Academy of Sciences of the United States of America. 87: 4406-4410. DOI: 10.1073/pnas.87.11.4406  1
1990 Jacobs DK. Sutural pattern and shell stress in Baculites with implications for other cephalopod shell morphologies Paleobiology. 16: 336-348.  1
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