Michael Worobey - Publications

Affiliations: 
Ecology & Evolutionary Biology University of Arizona, Tucson, AZ 
Area:
Virology Biology, Evolution and Development Biology

75 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Peacock T, Moncla L, Dudas G, VanInsberghe D, Sukhova K, Lloyd-Smith JO, Worobey M, Lowen AC, Nelson MI. The global H5N1 influenza panzootic in mammals. Nature. PMID 39317240 DOI: 10.1038/s41586-024-08054-z  0.365
2024 Crits-Christoph A, Levy JI, Pekar JE, Goldstein SA, Singh R, Hensel Z, Gangavarapu K, Rogers MB, Moshiri N, Garry RF, Holmes EC, Koopmans MPG, Lemey P, Peacock TP, Popescu S, ... ... Worobey M, et al. Genetic tracing of market wildlife and viruses at the epicenter of the COVID-19 pandemic. Cell. 187: 5468-5482.e11. PMID 39303692 DOI: 10.1016/j.cell.2024.08.010  0.59
2024 Moratorio G, Kesavardhana S, Lakdawala SS, Poon L, Worobey M, Nuzzo J, Su S. H5N1 influenza: Urgent questions and directions. Cell. PMID 39111311 DOI: 10.1016/j.cell.2024.07.024  0.312
2023 Matteson NL, Hassler GW, Kurzban E, Schwab MA, Perkins SA, Gangavarapu K, Levy JI, Parker E, Pride D, Hakim A, De Hoff P, Cheung W, Castro-Martinez A, Rivera A, Veder A, ... ... Worobey M, et al. Genomic surveillance reveals dynamic shifts in the connectivity of COVID-19 epidemics. Cell. PMID 38101407 DOI: 10.1016/j.cell.2023.11.024  0.591
2023 O'Toole Á, Neher RA, Ndodo N, Borges V, Gannon B, Gomes JP, Groves N, King DJ, Maloney D, Lemey P, Lewandowski K, Loman N, Myers R, Omah IF, Suchard MA, ... Worobey M, et al. APOBEC3 deaminase editing in mpox virus as evidence for sustained human transmission since at least 2016. Science (New York, N.Y.). 382: 595-600. PMID 37917680 DOI: 10.1126/science.adg8116  0.325
2023 Crits-Christoph A, Levy JI, Pekar JE, Goldstein SA, Singh R, Hensel Z, Gangavarapu K, Rogers MB, Moshiri N, Garry RF, Holmes EC, Koopmans MPG, Lemey P, Popescu S, Rambaut A, ... ... Worobey M, et al. Genetic tracing of market wildlife and viruses at the epicenter of the COVID-19 pandemic. Biorxiv : the Preprint Server For Biology. PMID 37745602 DOI: 10.1101/2023.09.13.557637  0.591
2023 Pekar JE, Lytras S, Ghafari M, Magee AF, Parker E, Havens JL, Katzourakis A, Vasylyeva TI, Suchard MA, Hughes AC, Hughes J, Robertson DL, Dellicour S, Worobey M, Wertheim JO, et al. The recency and geographical origins of the bat viruses ancestral to SARS-CoV and SARS-CoV-2. Biorxiv : the Preprint Server For Biology. PMID 37502985 DOI: 10.1101/2023.07.12.548617  0.667
2023 Harding C, Larsen BB, Otto HW, Potticary AL, Kraberger S, Custer JM, Suazo C, Upham NS, Worobey M, Van Doorslaer K, Varsani A. Diverse DNA virus genomes identified in fecal samples of Mexican free-tailed bats (Tadarida brasiliensis) captured in Chiricahua Mountains of southeast Arizona (USA). Virology. 580: 98-111. PMID 36801670 DOI: 10.1016/j.virol.2023.02.004  0.338
2022 Worobey M, Levy JI, Serrano LM, Crits-Christoph A, Pekar JE, Goldstein SA, Rasmussen AL, Kraemer MUG, Newman C, Koopmans MPG, Suchard MA, Wertheim JO, Lemey P, Robertson DL, Garry RF, et al. The Huanan Seafood Wholesale Market in Wuhan was the early epicenter of the COVID-19 pandemic. Science (New York, N.Y.). abp8715. PMID 35881010 DOI: 10.1126/science.abp8715  0.552
2022 Pekar JE, Magee A, Parker E, Moshiri N, Izhikevich K, Havens JL, Gangavarapu K, Malpica Serrano LM, Crits-Christoph A, Matteson NL, Zeller M, Levy JI, Wang JC, Hughes S, Lee J, ... ... Worobey M, et al. The molecular epidemiology of multiple zoonotic origins of SARS-CoV-2. Science (New York, N.Y.). eabp8337. PMID 35881005 DOI: 10.1126/science.abp8337  0.642
2022 Patrono LV, Vrancken B, Budt M, Düx A, Lequime S, Boral S, Gilbert MTP, Gogarten JF, Hoffmann L, Horst D, Merkel K, Morens D, Prepoint B, Schlotterbeck J, Schuenemann VJ, ... ... Worobey M, et al. Archival influenza virus genomes from Europe reveal genomic variability during the 1918 pandemic. Nature Communications. 13: 2314. PMID 35538057 DOI: 10.1038/s41467-022-29614-9  0.393
2021 Larsen BB, Gryseels S, Otto HW, Worobey M. Evolution and Diversity of Bat and Rodent Paramyxoviruses from North America. Journal of Virology. 96: e0109821. PMID 34668771 DOI: 10.1128/JVI.01098-21  0.374
2021 Bennedbæk M, Zhukova A, Tang ME, Bennet J, Munderi P, Ruxrungtham K, Gisslen M, Worobey M, Lundgren JD, Marvig RL. Phylogenetic analysis of HIV-1 shows frequent cross-country transmission and local population expansions. Virus Evolution. 7: veab055. PMID 34532059 DOI: 10.1093/ve/veab055  0.324
2021 Holmes EC, Goldstein SA, Rasmussen AL, Robertson DL, Crits-Christoph A, Wertheim JO, Anthony SJ, Barclay WS, Boni MF, Doherty PC, Farrar J, Geoghegan JL, Jiang X, Leibowitz JL, Neil SJD, ... ... Worobey M, et al. The origins of SARS-CoV-2: A critical review. Cell. PMID 34480864 DOI: 10.1016/j.cell.2021.08.017  0.554
2021 Pekar J, Worobey M, Moshiri N, Scheffler K, Wertheim JO. Timing the SARS-CoV-2 index case in Hubei province. Science (New York, N.Y.). PMID 33737402 DOI: 10.1126/science.abf8003  0.612
2020 Bolyen E, Dillon MR, Bokulich NA, Ladner JT, Larsen BB, Hepp CM, Lemmer D, Sahl JW, Sanchez A, Holdgraf C, Sewell C, Choudhury AG, Stachurski J, McKay M, Engelthaler DM, ... Worobey M, et al. Reproducibly sampling SARS-CoV-2 genomes across time, geography, and viral diversity. F1000research. 9: 657. PMID 33500774 DOI: 10.12688/F1000Research.24751.1  0.377
2020 Pekar J, Worobey M, Moshiri N, Scheffler K, Wertheim JO. Timing the SARS-CoV-2 Index Case in Hubei Province. Biorxiv : the Preprint Server For Biology. PMID 33269353 DOI: 10.1101/2020.11.20.392126  0.612
2020 Lemey P, Hong SL, Hill V, Baele G, Poletto C, Colizza V, O'Toole Á, McCrone JT, Andersen KG, Worobey M, Nelson MI, Rambaut A, Suchard MA. Accommodating individual travel history and unsampled diversity in Bayesian phylogeographic inference of SARS-CoV-2. Nature Communications. 11: 5110. PMID 33037213 DOI: 10.1038/s41467-020-18877-9  0.353
2020 Worobey M, Pekar J, Larsen BB, Nelson MI, Hill V, Joy JB, Rambaut A, Suchard MA, Wertheim JO, Lemey P. The emergence of SARS-CoV-2 in Europe and North America. Science (New York, N.Y.). PMID 32912998 DOI: 10.1126/Science.Abc8169  0.63
2020 Ladner JT, Larsen BB, Bowers JR, Hepp CM, Bolyen E, Folkerts M, Sheridan K, Pfeiffer A, Yaglom H, Lemmer D, Sahl JW, Kaelin EA, Maqsood R, Bokulich NA, Quirk G, ... ... Worobey M, et al. An Early Pandemic Analysis of SARS-CoV-2 Population Structure and Dynamics in Arizona. Mbio. 11. PMID 32887735 DOI: 10.1128/Mbio.02107-20  0.454
2020 Lemey P, Hong S, Hill V, Baele G, Poletto C, Colizza V, O'Toole A, McCrone JT, Andersen KG, Worobey M, Nelson MI, Rambaut A, Suchard MA. Accommodating individual travel history, global mobility, and unsampled diversity in phylogeography: a SARS-CoV-2 case study. Biorxiv : the Preprint Server For Biology. PMID 32596695 DOI: 10.1101/2020.06.22.165464  0.333
2020 Worobey M, Pekar J, Larsen BB, Nelson MI, Hill V, Joy JB, Rambaut A, Suchard MA, Wertheim JO, Lemey P. The emergence of SARS-CoV-2 in Europe and the US. Biorxiv : the Preprint Server For Biology. PMID 32511416 DOI: 10.1101/2020.05.21.109322  0.586
2020 Gryseels S, Watts TD, Kabongo Mpolesha JM, Larsen BB, Lemey P, Muyembe-Tamfum JJ, Teuwen DE, Worobey M. A near full-length HIV-1 genome from 1966 recovered from formalin-fixed paraffin-embedded tissue. Proceedings of the National Academy of Sciences of the United States of America. PMID 32430331 DOI: 10.1073/Pnas.1913682117  0.353
2020 Worobey M, Plotkin S, Hensley SE. Influenza Vaccines Delivered in Early Childhood Could Turn Antigenic Sin into Antigenic Blessings. Cold Spring Harbor Perspectives in Medicine. PMID 31964642 DOI: 10.1101/Cshperspect.A038471  0.384
2019 Gostic KM, Bridge R, Brady S, Viboud C, Worobey M, Lloyd-Smith JO. Childhood immune imprinting to influenza A shapes birth year-specific risk during seasonal H1N1 and H3N2 epidemics. Plos Pathogens. 15: e1008109. PMID 31856206 DOI: 10.1371/Journal.Ppat.1008109  0.385
2019 Bletsa M, Suchard MA, Ji X, Gryseels S, Vrancken B, Baele G, Worobey M, Lemey P. Divergence dating using mixed effects clock modelling: An application to HIV-1. Virus Evolution. 5: vez036. PMID 31720009 DOI: 10.1093/Ve/Vez036  0.342
2019 Cox J, Gill D, Cox F, Worobey M. Purulent bronchitis in 1917 and pandemic influenza in 1918. The Lancet. Infectious Diseases. 19: 360-361. PMID 30938298 DOI: 10.1016/S1473-3099(19)30114-8  0.362
2019 Worobey M, Cox J, Gill D. The origins of the great pandemic. Evolution, Medicine, and Public Health. 2019: 18-25. PMID 30805187 DOI: 10.1093/Emph/Eoz001  0.426
2018 Nelson MI, Worobey M. Origins of the 1918 Pandemic: Revisiting the Swine "Mixing Vessel" Hypothesis. American Journal of Epidemiology. 187: 2498-2502. PMID 30508193 DOI: 10.1093/Aje/Kwy150  0.471
2018 Larsen BB, Cole KL, Worobey M. Ancient DNA provides evidence of 27,000-year-old papillomavirus infection and long-term codivergence with rodents. Virus Evolution. 4: vey014. PMID 29977605 DOI: 10.1093/Ve/Vey014  0.434
2017 Worobey M. Epidemiology: Molecular mapping of Zika spread. Nature. PMID 28538722 DOI: 10.1038/Nature22495  0.39
2017 Gostic KM, Ambrose M, Worobey M, Lloyd-Smith JO. Maternal antibodies' role in immunity-Response. Science (New York, N.Y.). 355: 705. PMID 28209868 DOI: 10.1126/Science.Aam7389  0.377
2016 Ruboyianes R, Worobey M. Foamy-like endogenous retroviruses are extensive and abundant in teleosts. Virus Evolution. 2: vew032. PMID 28058112 DOI: 10.1093/Ve/Vew032  0.476
2016 Gostic KM, Ambrose M, Worobey M, Lloyd-Smith JO. Potent protection against H5N1 and H7N9 influenza via childhood hemagglutinin imprinting. Science (New York, N.Y.). 354: 722-726. PMID 27846599 DOI: 10.1126/Science.Aag1322  0.404
2016 Worobey M, Watts TD, McKay RA, Suchard MA, Granade T, Teuwen DE, Koblin BA, Heneine W, Lemey P, Jaffe HW. 1970s and 'Patient 0' HIV-1 genomes illuminate early HIV/AIDS history in North America. Nature. PMID 27783600 DOI: 10.1038/Nature19827  0.4
2015 Han GZ, Worobey M. A primitive endogenous lentivirus in a colugo: insights into the early evolution of lentiviruses. Molecular Biology and Evolution. 32: 211-5. PMID 25349288 DOI: 10.1093/Molbev/Msu297  0.599
2014 Han GZ, Worobey M. Endogenous viral sequences from the Cape golden mole (Chrysochloris asiatica) reveal the presence of foamy viruses in all major placental mammal clades. Plos One. 9: e97931. PMID 24835242 DOI: 10.1371/Journal.Pone.0097931  0.673
2014 Worobey M, Han GZ, Rambaut A. Genesis and pathogenesis of the 1918 pandemic H1N1 influenza a virus Proceedings of the National Academy of Sciences of the United States of America. 111: 8107-8112. PMID 24778238 DOI: 10.1073/Pnas.1324197111  0.634
2014 Worobey M, Han GZ, Rambaut A. A synchronized global sweep of the internal genes of modern avian influenza virus. Nature. 508: 254-7. PMID 24531761 DOI: 10.1038/Nature13016  0.67
2014 Suzuki TA, Worobey M. Geographical variation of human gut microbial composition. Biology Letters. 10: 20131037. PMID 24522631 DOI: 10.1098/Rsbl.2013.1037  0.306
2014 Worobey M, Han GZ, Rambaut A. A synchronized global sweep of the internal genes of modern avian influenza virus Nature. DOI: 10.1038/nature13016  0.576
2012 Li Y, Ndjango JB, Learn GH, Ramirez MA, Keele BF, Bibollet-Ruche F, Liu W, Easlick JL, Decker JM, Rudicell RS, Inogwabini BI, Ahuka-Mundeke S, Leendertz FH, Reynolds V, Muller MN, ... ... Worobey M, et al. Eastern chimpanzees, but not bonobos, represent a simian immunodeficiency virus reservoir. Journal of Virology. 86: 10776-91. PMID 22837215 DOI: 10.1128/Jvi.01498-12  0.415
2012 Han GZ, Worobey M. An endogenous foamy-like viral element in the coelacanth genome. Plos Pathogens. 8: e1002790. PMID 22761578 DOI: 10.1371/Journal.Ppat.1002790  0.666
2012 Han GZ, Worobey M. An endogenous foamy virus in the aye-aye (Daubentonia madagascariensis). Journal of Virology. 86: 7696-8. PMID 22573860 DOI: 10.1128/Jvi.00650-12  0.656
2012 Han GZ, Worobey M. Endogenous lentiviral elements in the weasel family (Mustelidae). Molecular Biology and Evolution. 29: 2905-8. PMID 22522310 DOI: 10.1093/Molbev/Mss126  0.594
2011 Han GZ, Worobey M. Homologous recombination in negative sense RNA viruses. Viruses. 3: 1358-73. PMID 21994784 DOI: 10.3390/V3081358  0.563
2011 Bjork A, Liu W, Wertheim JO, Hahn BH, Worobey M. Evolutionary history of chimpanzees inferred from complete mitochondrial genomes. Molecular Biology and Evolution. 28: 615-23. PMID 20802239 DOI: 10.1093/Molbev/Msq227  0.595
2010 Worobey M, Telfer P, Souquière S, Hunter M, Coleman CA, Metzger MJ, Reed P, Makuwa M, Hearn G, Honarvar S, Roques P, Apetrei C, Kazanji M, Marx PA. Island biogeography reveals the deep history of SIV. Science (New York, N.Y.). 329: 1487. PMID 20847261 DOI: 10.1126/Science.1193550  0.486
2010 Wertheim JO, Sanderson MJ, Worobey M, Bjork A. Relaxed molecular clocks, the bias-variance trade-off, and the quality of phylogenetic inference. Systematic Biology. 59: 1-8. PMID 20525616 DOI: 10.1093/Sysbio/Syp072  0.574
2009 Smith GJD, Vijaykrishna D, Bahl J, Lycett SJ, Worobey M, Pybus OG, Ma SK, Cheung CL, Raghwani J, Bhatt S, Peiris JSM, Guan Y, Rambaut A. Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza a epidemic Nature. 459: 1122-1125. PMID 19516283 DOI: 10.1038/Nature08182  0.496
2009 Wertheim JO, Worobey M. Dating the age of the SIV lineages that gave rise to HIV-1 and HIV-2. Plos Computational Biology. 5: e1000377. PMID 19412344 DOI: 10.1371/Journal.Pcbi.1000377  0.589
2009 Wertheim JO, Worobey M. Relaxed selection and the evolution of RNA virus mucin-like pathogenicity factors. Journal of Virology. 83: 4690-4. PMID 19224988 DOI: 10.1128/Jvi.02358-08  0.599
2008 Worobey M, Gemmel M, Teuwen DE, Haselkorn T, Kunstman K, Bunce M, Muyembe JJ, Kabongo JM, Kalengayi RM, Van Marck E, Gilbert MT, Wolinsky SM. Direct evidence of extensive diversity of HIV-1 in Kinshasa by 1960. Nature. 455: 661-4. PMID 18833279 DOI: 10.1038/Nature07390  0.422
2008 Liu W, Worobey M, Li Y, Keele BF, Bibollet-Ruche F, Guo Y, Goepfert PA, Santiago ML, Ndjango JB, Neel C, Clifford SL, Sanz C, Kamenya S, Wilson ML, Pusey AE, et al. Molecular ecology and natural history of simian foamy virus infection in wild-living chimpanzees. Plos Pathogens. 4: e1000097. PMID 18604273 DOI: 10.1371/Journal.Ppat.1000097  0.466
2008 Worobey M. Phylogenetic evidence against evolutionary stasis and natural abiotic reservoirs of influenza A virus. Journal of Virology. 82: 3769-74. PMID 18234791 DOI: 10.1128/Jvi.02207-07  0.445
2007 Cooper MA, Adam RD, Worobey M, Sterling CR. Population genetics provides evidence for recombination in Giardia. Current Biology : Cb. 17: 1984-8. PMID 17980591 DOI: 10.1016/J.Cub.2007.10.020  0.338
2007 Gilbert MTP, Rambaut A, Wlasiuk G, Spira TJ, Pitchenik AE, Worobey M. The emergence of HIV/AIDS in the Americas and beyond Proceedings of the National Academy of Sciences of the United States of America. 104: 18566-18570. PMID 17978186 DOI: 10.1073/Pnas.0705329104  0.356
2007 Wertheim JO, Worobey M. A challenge to the ancient origin of SIVagm based on African green monkey mitochondrial genomes. Plos Pathogens. 3: e95. PMID 17616975 DOI: 10.1371/Journal.Ppat.0030095  0.668
2007 Worobey M, Bjork A, Wertheim JO. Point, counterpoint: The evolution of pathogenic viruses and their human hosts Annual Review of Ecology, Evolution, and Systematics. 38: 515-540. DOI: 10.1146/Annurev.Ecolsys.38.091206.095722  0.636
2004 Barnett OE, Worobey M, Holmes EC, Cooper A. Detection of TT virus among chimpanzees in the wild using a noninvasive technique. Journal of Wildlife Diseases. 40: 230-7. PMID 15362822 DOI: 10.7589/0090-3558-40.2.230  0.435
2004 Lemey P, Pybus OG, Rambaut A, Drummond AJ, Robertson DL, Roques P, Worobey M, Vandamme AM. The molecular population genetics of HIV-1 group O. Genetics. 167: 1059-68. PMID 15280223 DOI: 10.1534/Genetics.104.026666  0.325
2004 Damond F, Worobey M, Campa P, Farfara I, Colin G, Matheron S, Brun-Vézinet F, Robertson DL, Simon F. Identification of a highly divergent HIV type 2 and proposal for a change in HIV type 2 classification. Aids Research and Human Retroviruses. 20: 666-72. PMID 15242544 DOI: 10.1089/0889222041217392  0.328
2004 Worobey M, Santiago ML, Keele BF, Ndjango JBN, Joy JB, Labama BL, Dhed'a BD, Rambaut A, Sharp PM, Shaw GM, Hahn BH. Contaminated polio vaccine theory refuted Nature. 428: 820. PMID 15103367 DOI: 10.1038/428820A  0.409
2003 van Rij RP, Worobey M, Visser JA, Schuitemaker H. Evolution of R5 and X4 human immunodeficiency virus type 1 gag sequences in vivo: evidence for recombination. Virology. 314: 451-9. PMID 14517097 DOI: 10.1016/S0042-6822(03)00454-9  0.398
2003 Walker PR, Worobey M, Rambaut A, Holmes EC, Pybus OG. Epidemiology: Sexual transmission of HIV in Africa. Nature. 422: 679. PMID 12700750 DOI: 10.1038/422679A  0.322
2002 Worobey M, Rambaut A, Pybus OG, Robertson DL. Questioning the evidence for genetic recombination in the 1918 "Spanish flu" virus. Science (New York, N.Y.). 296: 211 discussion 211. PMID 11951002 DOI: 10.1126/Science.296.5566.211A  0.414
2001 Worobey M. A novel approach to detecting and measuring recombination: New insights into evolution in viruses, bacteria, and mitochondria Molecular Biology and Evolution. 18: 1425-1434. PMID 11470833 DOI: 10.1093/Oxfordjournals.Molbev.A003928  0.336
2001 Jenkins GM, Worobey M, Woelk CH, Holmes EC. Nonquasispecies evidence for the evolution of rna viruses Molecular Biology and Evolution. 18: 987-994. PMID 11371587 DOI: 10.1093/Oxfordjournals.Molbev.A003900  0.386
2001 Worobey M, Holmes EC. Homologous recombination in GB virus C/hepatitis G virus Molecular Biology and Evolution. 18: 254-261. PMID 11158384 DOI: 10.1093/Oxfordjournals.Molbev.A003799  0.413
2000 Worobey M. Extensive homologous recombination among widely divergent TT viruses Journal of Virology. 74: 7666-7670. PMID 10906223 DOI: 10.1128/Jvi.74.16.7666-7670.2000  0.458
1999 Worobey M, Holmes EC. Evolutionary aspects of recombination in RNA viruses Journal of General Virology. 80: 2535-2543. PMID 10573145 DOI: 10.1099/0022-1317-80-10-2535  0.329
1999 Worobey M, Rambaut A, Holmes EC. Widespread intra-serotype recombination in natural populations of dengue virus Proceedings of the National Academy of Sciences of the United States of America. 96: 7352-7357. PMID 10377418 DOI: 10.1073/Pnas.96.13.7352  0.441
1999 Holmes EC, Worobey M, Rambaut A. Phylogenetic evidence for recombination in dengue virus Molecular Biology and Evolution. 16: 405-409. PMID 10331266 DOI: 10.1093/Oxfordjournals.Molbev.A026121  0.437
1998 Crespi B, Worobey M. COMPARATIVE ANALYSIS OF GALL MORPHOLOGY IN AUSTRALIAN GALL THRIPS: THE EVOLUTION OF EXTENDED PHENOTYPES. Evolution; International Journal of Organic Evolution. 52: 1686-1696. PMID 28565317 DOI: 10.1111/J.1558-5646.1998.Tb02248.X  0.312
1998 Crespi BJ, Carmean DA, Mound LA, Worobey M, Morris D. Phylogenetics of social behavior in Australian gall-forming thrips: evidence from mitochondrial DNA sequence, adult morphology and behavior, and gall morphology. Molecular Phylogenetics and Evolution. 9: 163-80. PMID 9479705 DOI: 10.1006/Mpev.1997.0449  0.305
Show low-probability matches.