| Year |
Citation |
Score |
| 2023 |
Matteson NL, Hassler GW, Kurzban E, Schwab MA, Perkins SA, Gangavarapu K, Levy JI, Parker E, Pride D, Hakim A, De Hoff P, Cheung W, Castro-Martinez A, Rivera A, Veder A, ... ... Worobey M, et al. Genomic surveillance reveals dynamic shifts in the connectivity of COVID-19 epidemics. Cell. PMID 38101407 DOI: 10.1016/j.cell.2023.11.024 |
0.596 |
|
| 2023 |
O'Toole Á, Neher RA, Ndodo N, Borges V, Gannon B, Gomes JP, Groves N, King DJ, Maloney D, Lemey P, Lewandowski K, Loman N, Myers R, Omah IF, Suchard MA, ... Worobey M, et al. APOBEC3 deaminase editing in mpox virus as evidence for sustained human transmission since at least 2016. Science (New York, N.Y.). 382: 595-600. PMID 37917680 DOI: 10.1126/science.adg8116 |
0.326 |
|
| 2023 |
Crits-Christoph A, Levy JI, Pekar JE, Goldstein SA, Singh R, Hensel Z, Gangavarapu K, Rogers MB, Moshiri N, Garry RF, Holmes EC, Koopmans MPG, Lemey P, Popescu S, Rambaut A, ... ... Worobey M, et al. Genetic tracing of market wildlife and viruses at the epicenter of the COVID-19 pandemic. Biorxiv : the Preprint Server For Biology. PMID 37745602 DOI: 10.1101/2023.09.13.557637 |
0.586 |
|
| 2023 |
Pekar JE, Lytras S, Ghafari M, Magee AF, Parker E, Havens JL, Katzourakis A, Vasylyeva TI, Suchard MA, Hughes AC, Hughes J, Robertson DL, Dellicour S, Worobey M, Wertheim JO, et al. The recency and geographical origins of the bat viruses ancestral to SARS-CoV and SARS-CoV-2. Biorxiv : the Preprint Server For Biology. PMID 37502985 DOI: 10.1101/2023.07.12.548617 |
0.67 |
|
| 2023 |
Harding C, Larsen BB, Otto HW, Potticary AL, Kraberger S, Custer JM, Suazo C, Upham NS, Worobey M, Van Doorslaer K, Varsani A. Diverse DNA virus genomes identified in fecal samples of Mexican free-tailed bats (Tadarida brasiliensis) captured in Chiricahua Mountains of southeast Arizona (USA). Virology. 580: 98-111. PMID 36801670 DOI: 10.1016/j.virol.2023.02.004 |
0.338 |
|
| 2022 |
Worobey M, Levy JI, Serrano LM, Crits-Christoph A, Pekar JE, Goldstein SA, Rasmussen AL, Kraemer MUG, Newman C, Koopmans MPG, Suchard MA, Wertheim JO, Lemey P, Robertson DL, Garry RF, et al. The Huanan Seafood Wholesale Market in Wuhan was the early epicenter of the COVID-19 pandemic. Science (New York, N.Y.). abp8715. PMID 35881010 DOI: 10.1126/science.abp8715 |
0.549 |
|
| 2022 |
Pekar JE, Magee A, Parker E, Moshiri N, Izhikevich K, Havens JL, Gangavarapu K, Malpica Serrano LM, Crits-Christoph A, Matteson NL, Zeller M, Levy JI, Wang JC, Hughes S, Lee J, ... ... Worobey M, et al. The molecular epidemiology of multiple zoonotic origins of SARS-CoV-2. Science (New York, N.Y.). eabp8337. PMID 35881005 DOI: 10.1126/science.abp8337 |
0.646 |
|
| 2022 |
Patrono LV, Vrancken B, Budt M, Düx A, Lequime S, Boral S, Gilbert MTP, Gogarten JF, Hoffmann L, Horst D, Merkel K, Morens D, Prepoint B, Schlotterbeck J, Schuenemann VJ, ... ... Worobey M, et al. Archival influenza virus genomes from Europe reveal genomic variability during the 1918 pandemic. Nature Communications. 13: 2314. PMID 35538057 DOI: 10.1038/s41467-022-29614-9 |
0.396 |
|
| 2021 |
Larsen BB, Gryseels S, Otto HW, Worobey M. Evolution and Diversity of Bat and Rodent Paramyxoviruses from North America. Journal of Virology. 96: e0109821. PMID 34668771 DOI: 10.1128/JVI.01098-21 |
0.373 |
|
| 2021 |
Bennedbæk M, Zhukova A, Tang ME, Bennet J, Munderi P, Ruxrungtham K, Gisslen M, Worobey M, Lundgren JD, Marvig RL. Phylogenetic analysis of HIV-1 shows frequent cross-country transmission and local population expansions. Virus Evolution. 7: veab055. PMID 34532059 DOI: 10.1093/ve/veab055 |
0.325 |
|
| 2021 |
Holmes EC, Goldstein SA, Rasmussen AL, Robertson DL, Crits-Christoph A, Wertheim JO, Anthony SJ, Barclay WS, Boni MF, Doherty PC, Farrar J, Geoghegan JL, Jiang X, Leibowitz JL, Neil SJD, ... ... Worobey M, et al. The origins of SARS-CoV-2: A critical review. Cell. PMID 34480864 DOI: 10.1016/j.cell.2021.08.017 |
0.557 |
|
| 2021 |
Pekar J, Worobey M, Moshiri N, Scheffler K, Wertheim JO. Timing the SARS-CoV-2 index case in Hubei province. Science (New York, N.Y.). PMID 33737402 DOI: 10.1126/science.abf8003 |
0.616 |
|
| 2020 |
Bolyen E, Dillon MR, Bokulich NA, Ladner JT, Larsen BB, Hepp CM, Lemmer D, Sahl JW, Sanchez A, Holdgraf C, Sewell C, Choudhury AG, Stachurski J, McKay M, Engelthaler DM, ... Worobey M, et al. Reproducibly sampling SARS-CoV-2 genomes across time, geography, and viral diversity. F1000research. 9: 657. PMID 33500774 DOI: 10.12688/F1000Research.24751.1 |
0.379 |
|
| 2020 |
Pekar J, Worobey M, Moshiri N, Scheffler K, Wertheim JO. Timing the SARS-CoV-2 Index Case in Hubei Province. Biorxiv : the Preprint Server For Biology. PMID 33269353 DOI: 10.1101/2020.11.20.392126 |
0.616 |
|
| 2020 |
Lemey P, Hong SL, Hill V, Baele G, Poletto C, Colizza V, O'Toole Á, McCrone JT, Andersen KG, Worobey M, Nelson MI, Rambaut A, Suchard MA. Accommodating individual travel history and unsampled diversity in Bayesian phylogeographic inference of SARS-CoV-2. Nature Communications. 11: 5110. PMID 33037213 DOI: 10.1038/s41467-020-18877-9 |
0.353 |
|
| 2020 |
Worobey M, Pekar J, Larsen BB, Nelson MI, Hill V, Joy JB, Rambaut A, Suchard MA, Wertheim JO, Lemey P. The emergence of SARS-CoV-2 in Europe and North America. Science (New York, N.Y.). PMID 32912998 DOI: 10.1126/Science.Abc8169 |
0.634 |
|
| 2020 |
Ladner JT, Larsen BB, Bowers JR, Hepp CM, Bolyen E, Folkerts M, Sheridan K, Pfeiffer A, Yaglom H, Lemmer D, Sahl JW, Kaelin EA, Maqsood R, Bokulich NA, Quirk G, ... ... Worobey M, et al. An Early Pandemic Analysis of SARS-CoV-2 Population Structure and Dynamics in Arizona. Mbio. 11. PMID 32887735 DOI: 10.1128/Mbio.02107-20 |
0.456 |
|
| 2020 |
Lemey P, Hong S, Hill V, Baele G, Poletto C, Colizza V, O'Toole A, McCrone JT, Andersen KG, Worobey M, Nelson MI, Rambaut A, Suchard MA. Accommodating individual travel history, global mobility, and unsampled diversity in phylogeography: a SARS-CoV-2 case study. Biorxiv : the Preprint Server For Biology. PMID 32596695 DOI: 10.1101/2020.06.22.165464 |
0.334 |
|
| 2020 |
Worobey M, Pekar J, Larsen BB, Nelson MI, Hill V, Joy JB, Rambaut A, Suchard MA, Wertheim JO, Lemey P. The emergence of SARS-CoV-2 in Europe and the US. Biorxiv : the Preprint Server For Biology. PMID 32511416 DOI: 10.1101/2020.05.21.109322 |
0.591 |
|
| 2020 |
Gryseels S, Watts TD, Kabongo Mpolesha JM, Larsen BB, Lemey P, Muyembe-Tamfum JJ, Teuwen DE, Worobey M. A near full-length HIV-1 genome from 1966 recovered from formalin-fixed paraffin-embedded tissue. Proceedings of the National Academy of Sciences of the United States of America. PMID 32430331 DOI: 10.1073/Pnas.1913682117 |
0.355 |
|
| 2020 |
Worobey M, Plotkin S, Hensley SE. Influenza Vaccines Delivered in Early Childhood Could Turn Antigenic Sin into Antigenic Blessings. Cold Spring Harbor Perspectives in Medicine. PMID 31964642 DOI: 10.1101/Cshperspect.A038471 |
0.385 |
|
| 2019 |
Gostic KM, Bridge R, Brady S, Viboud C, Worobey M, Lloyd-Smith JO. Childhood immune imprinting to influenza A shapes birth year-specific risk during seasonal H1N1 and H3N2 epidemics. Plos Pathogens. 15: e1008109. PMID 31856206 DOI: 10.1371/Journal.Ppat.1008109 |
0.387 |
|
| 2019 |
Bletsa M, Suchard MA, Ji X, Gryseels S, Vrancken B, Baele G, Worobey M, Lemey P. Divergence dating using mixed effects clock modelling: An application to HIV-1. Virus Evolution. 5: vez036. PMID 31720009 DOI: 10.1093/Ve/Vez036 |
0.345 |
|
| 2019 |
Cox J, Gill D, Cox F, Worobey M. Purulent bronchitis in 1917 and pandemic influenza in 1918. The Lancet. Infectious Diseases. 19: 360-361. PMID 30938298 DOI: 10.1016/S1473-3099(19)30114-8 |
0.364 |
|
| 2019 |
Worobey M, Cox J, Gill D. The origins of the great pandemic. Evolution, Medicine, and Public Health. 2019: 18-25. PMID 30805187 DOI: 10.1093/Emph/Eoz001 |
0.428 |
|
| 2018 |
Nelson MI, Worobey M. Origins of the 1918 Pandemic: Revisiting the Swine "Mixing Vessel" Hypothesis. American Journal of Epidemiology. 187: 2498-2502. PMID 30508193 DOI: 10.1093/Aje/Kwy150 |
0.472 |
|
| 2018 |
Larsen BB, Cole KL, Worobey M. Ancient DNA provides evidence of 27,000-year-old papillomavirus infection and long-term codivergence with rodents. Virus Evolution. 4: vey014. PMID 29977605 DOI: 10.1093/Ve/Vey014 |
0.433 |
|
| 2017 |
Worobey M. Epidemiology: Molecular mapping of Zika spread. Nature. PMID 28538722 DOI: 10.1038/Nature22495 |
0.391 |
|
| 2017 |
Gostic KM, Ambrose M, Worobey M, Lloyd-Smith JO. Maternal antibodies' role in immunity-Response. Science (New York, N.Y.). 355: 705. PMID 28209868 DOI: 10.1126/Science.Aam7389 |
0.378 |
|
| 2016 |
Ruboyianes R, Worobey M. Foamy-like endogenous retroviruses are extensive and abundant in teleosts. Virus Evolution. 2: vew032. PMID 28058112 DOI: 10.1093/Ve/Vew032 |
0.476 |
|
| 2016 |
Gostic KM, Ambrose M, Worobey M, Lloyd-Smith JO. Potent protection against H5N1 and H7N9 influenza via childhood hemagglutinin imprinting. Science (New York, N.Y.). 354: 722-726. PMID 27846599 DOI: 10.1126/Science.Aag1322 |
0.406 |
|
| 2016 |
Worobey M, Watts TD, McKay RA, Suchard MA, Granade T, Teuwen DE, Koblin BA, Heneine W, Lemey P, Jaffe HW. 1970s and 'Patient 0' HIV-1 genomes illuminate early HIV/AIDS history in North America. Nature. PMID 27783600 DOI: 10.1038/Nature19827 |
0.403 |
|
| 2015 |
Han GZ, Worobey M. A primitive endogenous lentivirus in a colugo: insights into the early evolution of lentiviruses. Molecular Biology and Evolution. 32: 211-5. PMID 25349288 DOI: 10.1093/Molbev/Msu297 |
0.601 |
|
| 2014 |
Han GZ, Worobey M. Endogenous viral sequences from the Cape golden mole (Chrysochloris asiatica) reveal the presence of foamy viruses in all major placental mammal clades. Plos One. 9: e97931. PMID 24835242 DOI: 10.1371/Journal.Pone.0097931 |
0.675 |
|
| 2014 |
Worobey M, Han GZ, Rambaut A. Genesis and pathogenesis of the 1918 pandemic H1N1 influenza a virus Proceedings of the National Academy of Sciences of the United States of America. 111: 8107-8112. PMID 24778238 DOI: 10.1073/Pnas.1324197111 |
0.636 |
|
| 2014 |
Worobey M, Han GZ, Rambaut A. A synchronized global sweep of the internal genes of modern avian influenza virus. Nature. 508: 254-7. PMID 24531761 DOI: 10.1038/Nature13016 |
0.672 |
|
| 2014 |
Suzuki TA, Worobey M. Geographical variation of human gut microbial composition. Biology Letters. 10: 20131037. PMID 24522631 DOI: 10.1098/Rsbl.2013.1037 |
0.306 |
|
| 2014 |
Worobey M, Han GZ, Rambaut A. A synchronized global sweep of the internal genes of modern avian influenza virus Nature. DOI: 10.1038/nature13016 |
0.579 |
|
| 2012 |
Li Y, Ndjango JB, Learn GH, Ramirez MA, Keele BF, Bibollet-Ruche F, Liu W, Easlick JL, Decker JM, Rudicell RS, Inogwabini BI, Ahuka-Mundeke S, Leendertz FH, Reynolds V, Muller MN, ... ... Worobey M, et al. Eastern chimpanzees, but not bonobos, represent a simian immunodeficiency virus reservoir. Journal of Virology. 86: 10776-91. PMID 22837215 DOI: 10.1128/Jvi.01498-12 |
0.414 |
|
| 2012 |
Han GZ, Worobey M. An endogenous foamy-like viral element in the coelacanth genome. Plos Pathogens. 8: e1002790. PMID 22761578 DOI: 10.1371/Journal.Ppat.1002790 |
0.668 |
|
| 2012 |
Han GZ, Worobey M. An endogenous foamy virus in the aye-aye (Daubentonia madagascariensis). Journal of Virology. 86: 7696-8. PMID 22573860 DOI: 10.1128/Jvi.00650-12 |
0.657 |
|
| 2012 |
Han GZ, Worobey M. Endogenous lentiviral elements in the weasel family (Mustelidae). Molecular Biology and Evolution. 29: 2905-8. PMID 22522310 DOI: 10.1093/Molbev/Mss126 |
0.596 |
|
| 2011 |
Han GZ, Worobey M. Homologous recombination in negative sense RNA viruses. Viruses. 3: 1358-73. PMID 21994784 DOI: 10.3390/V3081358 |
0.564 |
|
| 2011 |
Bjork A, Liu W, Wertheim JO, Hahn BH, Worobey M. Evolutionary history of chimpanzees inferred from complete mitochondrial genomes. Molecular Biology and Evolution. 28: 615-23. PMID 20802239 DOI: 10.1093/Molbev/Msq227 |
0.599 |
|
| 2010 |
Worobey M, Telfer P, Souquière S, Hunter M, Coleman CA, Metzger MJ, Reed P, Makuwa M, Hearn G, Honarvar S, Roques P, Apetrei C, Kazanji M, Marx PA. Island biogeography reveals the deep history of SIV. Science (New York, N.Y.). 329: 1487. PMID 20847261 DOI: 10.1126/Science.1193550 |
0.486 |
|
| 2010 |
Wertheim JO, Sanderson MJ, Worobey M, Bjork A. Relaxed molecular clocks, the bias-variance trade-off, and the quality of phylogenetic inference. Systematic Biology. 59: 1-8. PMID 20525616 DOI: 10.1093/Sysbio/Syp072 |
0.579 |
|
| 2009 |
Smith GJD, Vijaykrishna D, Bahl J, Lycett SJ, Worobey M, Pybus OG, Ma SK, Cheung CL, Raghwani J, Bhatt S, Peiris JSM, Guan Y, Rambaut A. Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza a epidemic Nature. 459: 1122-1125. PMID 19516283 DOI: 10.1038/Nature08182 |
0.497 |
|
| 2009 |
Wertheim JO, Worobey M. Dating the age of the SIV lineages that gave rise to HIV-1 and HIV-2. Plos Computational Biology. 5: e1000377. PMID 19412344 DOI: 10.1371/Journal.Pcbi.1000377 |
0.594 |
|
| 2009 |
Wertheim JO, Worobey M. Relaxed selection and the evolution of RNA virus mucin-like pathogenicity factors. Journal of Virology. 83: 4690-4. PMID 19224988 DOI: 10.1128/Jvi.02358-08 |
0.602 |
|
| 2008 |
Worobey M, Gemmel M, Teuwen DE, Haselkorn T, Kunstman K, Bunce M, Muyembe JJ, Kabongo JM, Kalengayi RM, Van Marck E, Gilbert MT, Wolinsky SM. Direct evidence of extensive diversity of HIV-1 in Kinshasa by 1960. Nature. 455: 661-4. PMID 18833279 DOI: 10.1038/Nature07390 |
0.423 |
|
| 2008 |
Liu W, Worobey M, Li Y, Keele BF, Bibollet-Ruche F, Guo Y, Goepfert PA, Santiago ML, Ndjango JB, Neel C, Clifford SL, Sanz C, Kamenya S, Wilson ML, Pusey AE, et al. Molecular ecology and natural history of simian foamy virus infection in wild-living chimpanzees. Plos Pathogens. 4: e1000097. PMID 18604273 DOI: 10.1371/Journal.Ppat.1000097 |
0.465 |
|
| 2008 |
Worobey M. Phylogenetic evidence against evolutionary stasis and natural abiotic reservoirs of influenza A virus. Journal of Virology. 82: 3769-74. PMID 18234791 DOI: 10.1128/Jvi.02207-07 |
0.446 |
|
| 2007 |
Cooper MA, Adam RD, Worobey M, Sterling CR. Population genetics provides evidence for recombination in Giardia. Current Biology : Cb. 17: 1984-8. PMID 17980591 DOI: 10.1016/J.Cub.2007.10.020 |
0.337 |
|
| 2007 |
Gilbert MTP, Rambaut A, Wlasiuk G, Spira TJ, Pitchenik AE, Worobey M. The emergence of HIV/AIDS in the Americas and beyond Proceedings of the National Academy of Sciences of the United States of America. 104: 18566-18570. PMID 17978186 DOI: 10.1073/Pnas.0705329104 |
0.358 |
|
| 2007 |
Wertheim JO, Worobey M. A challenge to the ancient origin of SIVagm based on African green monkey mitochondrial genomes. Plos Pathogens. 3: e95. PMID 17616975 DOI: 10.1371/Journal.Ppat.0030095 |
0.672 |
|
| 2007 |
Worobey M, Bjork A, Wertheim JO. Point, counterpoint: The evolution of pathogenic viruses and their human hosts Annual Review of Ecology, Evolution, and Systematics. 38: 515-540. DOI: 10.1146/Annurev.Ecolsys.38.091206.095722 |
0.64 |
|
| 2004 |
Barnett OE, Worobey M, Holmes EC, Cooper A. Detection of TT virus among chimpanzees in the wild using a noninvasive technique. Journal of Wildlife Diseases. 40: 230-7. PMID 15362822 DOI: 10.7589/0090-3558-40.2.230 |
0.435 |
|
| 2004 |
Lemey P, Pybus OG, Rambaut A, Drummond AJ, Robertson DL, Roques P, Worobey M, Vandamme AM. The molecular population genetics of HIV-1 group O. Genetics. 167: 1059-68. PMID 15280223 DOI: 10.1534/Genetics.104.026666 |
0.327 |
|
| 2004 |
Damond F, Worobey M, Campa P, Farfara I, Colin G, Matheron S, Brun-Vézinet F, Robertson DL, Simon F. Identification of a highly divergent HIV type 2 and proposal for a change in HIV type 2 classification. Aids Research and Human Retroviruses. 20: 666-72. PMID 15242544 DOI: 10.1089/0889222041217392 |
0.33 |
|
| 2004 |
Worobey M, Santiago ML, Keele BF, Ndjango JBN, Joy JB, Labama BL, Dhed'a BD, Rambaut A, Sharp PM, Shaw GM, Hahn BH. Contaminated polio vaccine theory refuted Nature. 428: 820. PMID 15103367 DOI: 10.1038/428820A |
0.411 |
|
| 2003 |
van Rij RP, Worobey M, Visser JA, Schuitemaker H. Evolution of R5 and X4 human immunodeficiency virus type 1 gag sequences in vivo: evidence for recombination. Virology. 314: 451-9. PMID 14517097 DOI: 10.1016/S0042-6822(03)00454-9 |
0.399 |
|
| 2003 |
Walker PR, Worobey M, Rambaut A, Holmes EC, Pybus OG. Epidemiology: Sexual transmission of HIV in Africa. Nature. 422: 679. PMID 12700750 DOI: 10.1038/422679A |
0.324 |
|
| 2002 |
Worobey M, Rambaut A, Pybus OG, Robertson DL. Questioning the evidence for genetic recombination in the 1918 "Spanish flu" virus. Science (New York, N.Y.). 296: 211 discussion 211. PMID 11951002 DOI: 10.1126/Science.296.5566.211A |
0.412 |
|
| 2001 |
Worobey M. A novel approach to detecting and measuring recombination: New insights into evolution in viruses, bacteria, and mitochondria Molecular Biology and Evolution. 18: 1425-1434. PMID 11470833 DOI: 10.1093/Oxfordjournals.Molbev.A003928 |
0.335 |
|
| 2001 |
Jenkins GM, Worobey M, Woelk CH, Holmes EC. Nonquasispecies evidence for the evolution of rna viruses Molecular Biology and Evolution. 18: 987-994. PMID 11371587 DOI: 10.1093/Oxfordjournals.Molbev.A003900 |
0.387 |
|
| 2001 |
Worobey M, Holmes EC. Homologous recombination in GB virus C/hepatitis G virus Molecular Biology and Evolution. 18: 254-261. PMID 11158384 DOI: 10.1093/Oxfordjournals.Molbev.A003799 |
0.415 |
|
| 2000 |
Worobey M. Extensive homologous recombination among widely divergent TT viruses Journal of Virology. 74: 7666-7670. PMID 10906223 DOI: 10.1128/Jvi.74.16.7666-7670.2000 |
0.46 |
|
| 1999 |
Worobey M, Holmes EC. Evolutionary aspects of recombination in RNA viruses Journal of General Virology. 80: 2535-2543. PMID 10573145 DOI: 10.1099/0022-1317-80-10-2535 |
0.33 |
|
| 1999 |
Worobey M, Rambaut A, Holmes EC. Widespread intra-serotype recombination in natural populations of dengue virus Proceedings of the National Academy of Sciences of the United States of America. 96: 7352-7357. PMID 10377418 DOI: 10.1073/Pnas.96.13.7352 |
0.441 |
|
| 1999 |
Holmes EC, Worobey M, Rambaut A. Phylogenetic evidence for recombination in dengue virus Molecular Biology and Evolution. 16: 405-409. PMID 10331266 DOI: 10.1093/Oxfordjournals.Molbev.A026121 |
0.438 |
|
| 1998 |
Crespi B, Worobey M. COMPARATIVE ANALYSIS OF GALL MORPHOLOGY IN AUSTRALIAN GALL THRIPS: THE EVOLUTION OF EXTENDED PHENOTYPES. Evolution; International Journal of Organic Evolution. 52: 1686-1696. PMID 28565317 DOI: 10.1111/J.1558-5646.1998.Tb02248.X |
0.312 |
|
| 1998 |
Crespi BJ, Carmean DA, Mound LA, Worobey M, Morris D. Phylogenetics of social behavior in Australian gall-forming thrips: evidence from mitochondrial DNA sequence, adult morphology and behavior, and gall morphology. Molecular Phylogenetics and Evolution. 9: 163-80. PMID 9479705 DOI: 10.1006/Mpev.1997.0449 |
0.305 |
|
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