Adam S. Lauring, Ph.D. - Publications

Affiliations: 
2000 University of Washington, Seattle, Seattle, WA 
Area:
Molecular Biology, Microbiology Biology

59 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Li Y, Arcos S, Sabsay KR, Te Velthuis AJW, Lauring AS. Deep mutational scanning reveals the functional constraints and evolutionary potential of the influenza A virus PB1 protein. Journal of Virology. e0132923. PMID 37882522 DOI: 10.1128/jvi.01329-23  0.391
2023 Arcos S, Han AX, Te Velthuis AJW, Russell CA, Lauring AS. Mutual information networks reveal evolutionary relationships within the influenza A virus polymerase. Virus Evolution. 9: vead037. PMID 37325086 DOI: 10.1093/ve/vead037  0.376
2023 Lewis NM, Delahoy MJ, Sumner KM, Lauring AS, Bendall EE, Mortenson L, Edwards E, Stamper A, Flannery B, Martin ET. Risk factors for infection with influenza A(H3N2) virus on a US university campus, October-November 2021. Influenza and Other Respiratory Viruses. 17: e13151. PMID 37246148 DOI: 10.1111/irv.13151  0.34
2023 Arcos S, Han AX, Te Velthuis AJW, Russell CA, Lauring AS. Mutual information networks reveal evolutionary relationships within the influenza A virus polymerase. Biorxiv : the Preprint Server For Biology. PMID 36824962 DOI: 10.1101/2023.02.16.528850  0.353
2023 Rolfes MA, Talbot HK, McLean HQ, Stockwell MS, Ellingson KD, Lutrick K, Bowman NM, Bendall EE, Bullock A, Chappell JD, Deyoe JE, Gilbert J, Halasa NB, Hart KE, Johnson S, ... ... Lauring AS, et al. Household Transmission of Influenza A Viruses in 2021-2022. Jama. PMID 36701144 DOI: 10.1001/jama.2023.0064  0.388
2021 Delahoy MJ, Mortenson L, Bauman L, Marquez J, Bagdasarian N, Coyle J, Sumner K, Lewis NM, Lauring AS, Flannery B, Patel MM, Martin ET. Influenza A(H3N2) Outbreak on a University Campus - Michigan, October-November 2021. Mmwr. Morbidity and Mortality Weekly Report. 70: 1712-1714. PMID 34882659 DOI: 10.15585/mmwr.mm7049e1  0.304
2021 Le Sage V, Jones JE, Kormuth KA, Fitzsimmons WJ, Nturibi E, Padovani GH, Arevalo CP, French AJ, Avery AJ, Manivanh R, McGrady EE, Bhagwat AR, Lauring AS, Hensley SE, Lakdawala SS. Pre-existing heterosubtypic immunity provides a barrier to airborne transmission of influenza viruses. Plos Pathogens. 17: e1009273. PMID 33600489 DOI: 10.1371/journal.ppat.1009273  0.357
2021 Valesano AL, Rumfelt KE, Dimcheff DE, Blair CN, Fitzsimmons WJ, Petrie JG, Martin ET, Lauring AS. Temporal dynamics of SARS-CoV-2 mutation accumulation within and across infected hosts. Biorxiv : the Preprint Server For Biology. PMID 33501443 DOI: 10.1101/2021.01.19.427330  0.3
2020 Schneider DJ, Smith KA, Latuszek CE, Wilke CA, Lyons DM, Penke LR, Speth JM, Marthi M, Swanson JA, Moore BB, Lauring AS, Peters-Golden M. Alveolar macrophage-derived extracellular vesicles inhibit endosomal fusion of influenza virus. The Embo Journal. e105057. PMID 32643835 DOI: 10.15252/Embj.2020105057  0.382
2020 Petrie JG, Lauring AS, Martin ET, Kaye KS. Hospital Associated Respiratory Virus Infection in Children and Adults: It Does Not Just Occur During Cold and Flu Season. Open Forum Infectious Diseases. 7: ofaa200. PMID 32617374 DOI: 10.1093/Ofid/Ofaa200  0.409
2020 Lauring AS. Within-Host Viral Diversity: A Window into Viral Evolution. Annual Review of Virology. PMID 32511081 DOI: 10.1146/Annurev-Virology-010320-061642  0.464
2019 Valesano AL, Fitzsimmons WJ, McCrone JT, Petrie JG, Monto AS, Martin ET, Lauring AS. Influenza B viruses exhibit lower within-host diversity than influenza A viruses in human hosts. Journal of Virology. PMID 31801858 DOI: 10.1128/Jvi.01710-19  0.495
2019 Segaloff HE, Cheng B, Miller AV, Petrie JG, Malosh RE, Cheng C, Lauring AS, Lamerato L, Ferdinands JM, Monto AS, Martin ET. Influenza Vaccine Effectiveness in the Inpatient Setting; Evaluation of Potential Bias in the Test Negative Design by use of Alternate Control Groups. American Journal of Epidemiology. PMID 31673696 DOI: 10.1093/Aje/Kwz248  0.386
2019 Monto AS, Malosh RE, Evans R, Lauring AS, Gordon A, Thompson MG, Fry AM, Flannery B, Ohmit SE, Petrie JG, Martin ET. Data resource profile: Household Influenza Vaccine Evaluation (HIVE) Study. International Journal of Epidemiology. PMID 31038700 DOI: 10.1093/Ije/Dyz086  0.324
2019 Petrie JG, Martin ET, Truscon R, Johnson E, Cheng CK, McSpadden EJ, Malosh RE, Lauring AS, Lamerato LE, Eichelberger MC, Ferdinands JM, Monto AS. Evaluation of correlates of protection against influenza A(H3N2) and A(H1N1)pdm09 infection: Applications to the hospitalized patient population. Vaccine. PMID 30738647 DOI: 10.1016/J.Vaccine.2019.01.055  0.397
2019 Levine MZ, Martin ET, Petrie JG, Lauring AS, Holiday C, Jefferson S, Fitzsimmons WJ, Johnson E, Ferdinands JM, Monto AS. Antibodies against egg- and cell-grown influenza A(H3N2) viruses in adults hospitalized during the 2017-2018 season. The Journal of Infectious Diseases. PMID 30721982 DOI: 10.1093/Infdis/Jiz049  0.391
2019 Petrie JG, Lauring AS, Kaye KS. 1182. Clinical Outcomes of Hospital-Associated Respiratory Virus Infections Open Forum Infectious Diseases. 6: S423-S424. DOI: 10.1093/Ofid/Ofz360.1045  0.445
2018 Lyons DM, Lauring AS. Mutation and Epistasis in Influenza Virus Evolution. Viruses. 10. PMID 30081492 DOI: 10.3390/V10080407  0.465
2018 Petrie JG, Lauring AS. Influenza A (H7N9) virus evolution: Which genetic mutations are antigenically important? The Journal of Infectious Diseases. PMID 29982612 DOI: 10.1093/Infdis/Jiy409  0.47
2018 Fitzsimmons WJ, Woods RJ, McCrone JT, Woodman A, Arnold JJ, Yennawar M, Evans R, Cameron CE, Lauring AS. A speed-fidelity trade-off determines the mutation rate and virulence of an RNA virus. Plos Biology. 16: e2006459. PMID 29953453 DOI: 10.1371/Journal.Pbio.2006459  0.408
2018 Segaloff HE, Petrie JG, Malosh RE, Cheng CK, McSpadden EJ, Ferdinands JM, Lamerato L, Lauring AS, Monto AS, Martin ET. Severe morbidity among hospitalised adults with acute influenza and other respiratory infections: 2014-2015 and 2015-2016. Epidemiology and Infection. 1-9. PMID 29880077 DOI: 10.1017/S0950268818001486  0.38
2018 Peck KM, Lauring AS. The complexities of viral mutation rates. Journal of Virology. PMID 29720522 DOI: 10.1128/Jvi.01031-17  0.339
2018 McCrone JT, Woods RJ, Martin ET, Malosh RE, Monto AS, Lauring AS. Stochastic processes constrain the within and between host evolution of influenza virus. Elife. 7. PMID 29683424 DOI: 10.7554/Elife.35962  0.475
2018 McCrone JT, Woods RJ, Martin ET, Malosh RE, Monto AS, Lauring AS. Author response: Stochastic processes constrain the within and between host evolution of influenza virus Elife. DOI: 10.7554/Elife.35962.036  0.432
2017 McCrone JT, Lauring AS. Genetic bottlenecks in intraspecies virus transmission. Current Opinion in Virology. 28: 20-25. PMID 29107838 DOI: 10.1016/J.Coviro.2017.10.008  0.422
2017 Lyons DM, Lauring AS. Evidence for the selective basis of transition to transversion substitution bias in two RNA viruses. Molecular Biology and Evolution. PMID 29029187 DOI: 10.1093/Molbev/Msx251  0.386
2017 Malosh RE, Martin ET, Callear AP, Petrie JG, Lauring AS, Lamerato L, Fry AM, Ferdinands J, Flannery B, Monto AS. Respiratory syncytial virus hospitalization in middle-aged and older adults. Journal of Clinical Virology : the Official Publication of the Pan American Society For Clinical Virology. 96: 37-43. PMID 28942341 DOI: 10.1016/J.Jcv.2017.09.001  0.345
2017 Pauly MD, Lyons DM, Fitzsimmons WJ, Lauring AS. Epistatic Interactions within the Influenza A Virus Polymerase Complex Mediate Mutagen Resistance and Replication Fidelity. Msphere. 2. PMID 28815216 DOI: 10.1128/mSphere.00323-17  0.351
2017 Pauly MD, Procario MC, Lauring AS. A novel twelve class fluctuation test reveals higher than expected mutation rates for influenza A viruses. Elife. 6. PMID 28598328 DOI: 10.7554/Elife.26437  0.433
2017 Debbink K, McCrone JT, Petrie JG, Truscon R, Johnson E, Mantlo EK, Monto AS, Lauring AS. Vaccination has minimal impact on the intrahost diversity of H3N2 influenza viruses. Plos Pathogens. 13: e1006194. PMID 28141862 DOI: 10.1371/Journal.Ppat.1006194  0.421
2017 Pauly MD, Procario MC, Lauring AS. Author response: A novel twelve class fluctuation test reveals higher than expected mutation rates for influenza A viruses Elife. DOI: 10.7554/Elife.26437.020  0.397
2017 E Segaloff H, Petrie JG, Malosh RE, Cheng CK, Ferdinands JM, Lamerato L, Lauring AS, Monto AS, Martin ET. Influenza Vaccination and Treatment with Antiviral Agents Among Hospitalized Adults in the 2014–2015 and 2015–2016 Influenza Seasons Open Forum Infectious Diseases. 4: S316-S317. DOI: 10.1093/Ofid/Ofx163.740  0.362
2016 Visher E, Whitefield SE, McCrone JT, Fitzsimmons W, Lauring AS. The Mutational Robustness of Influenza A Virus. Plos Pathogens. 12: e1005856. PMID 27571422 DOI: 10.1371/Journal.Ppat.1005856  0.421
2016 Ganesan S, Pham D, Jing Y, Farazuddin M, Hudy MH, Unger B, Comstock AT, Proud D, Lauring AS, Sajjan US. TLR2 Activation Limits Rhinovirus-Stimulated CXCL-10 by Attenuating IRAK-1-Dependent IL-33 Receptor Signaling in Human Bronchial Epithelial Cells. Journal of Immunology (Baltimore, Md. : 1950). PMID 27503209 DOI: 10.4049/Jimmunol.1502702  0.31
2016 Petrie JG, Ohmit SE, Cheng CK, Martin ET, Malosh RE, Lauring AS, Lamerato LE, Reyes KC, Flannery B, Ferdinands JM, Monto AS. Influenza Vaccine Effectiveness against Antigenically Drifted Influenza Higher than Expected in Hospitalized Adults: 2014-2015. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 27369320 DOI: 10.1093/Cid/Ciw432  0.398
2016 Presloid JB, Mohammad TF, Lauring AS, Novella IS. Antigenic diversification is correlated with increased thermostability in a mammalian virus. Virology. 496: 203-214. PMID 27344137 DOI: 10.1016/J.Virol.2016.06.009  0.406
2016 Lauring AS. Lessons from Reverse Translation. Plos Pathogens. 12: e1005516. PMID 27309853 DOI: 10.1371/Journal.Ppat.1005516  0.49
2016 McCrone JT, Lauring AS. Measurements of intrahost viral diversity are extremely sensitive to systematic errors in variant calling. Journal of Virology. PMID 27194763 DOI: 10.1128/Jvi.00667-16  0.376
2016 Long D, Deng X, Singh P, Loeb M, Lauring AS, Seielstad M. Identification of genetic variants associated with susceptibility to West Nile virus neuroinvasive disease. Genes and Immunity. PMID 27170560 DOI: 10.1038/Gene.2016.21  0.334
2016 Lauring AS, McCrone J, Debbink K, Truscon R, Johnson E, Malosh RE, Petrie JG, Ohmit SE, Monto AS. Next-Generation Sequencing of Influenza Viruses in a Household Cohort Accurately Identifies Transmission Pairs and Reveals a Bottleneck Size of Close to One Open Forum Infectious Diseases. 3. DOI: 10.1093/Ofid/Ofw194.121  0.41
2015 Jorge DM, Mills RE, Lauring AS. CodonShuffle: a tool for generating and analyzing synonymously mutated sequences. Virus Evolution. 1: vev012. PMID 27774284 DOI: 10.1093/Ve/Vev012  0.38
2015 Pauly MD, Lauring AS. Effective lethal mutagenesis of influenza virus by three nucleoside analogs. Journal of Virology. 89: 3584-97. PMID 25589650 DOI: 10.1128/Jvi.03483-14  0.48
2014 Bull JJ, Lauring AS. Theory and empiricism in virulence evolution. Plos Pathogens. 10: e1004387. PMID 25340792 DOI: 10.1371/Journal.Ppat.1004387  0.355
2014 Long D, Fix OK, Deng X, Seielstad M, Lauring AS. Whole genome sequencing to identify host genetic risk factors for severe outcomes of hepatitis a virus infection. Journal of Medical Virology. 86: 1661-8. PMID 24978929 DOI: 10.1002/Jmv.24007  0.409
2014 Wang H, Perry JW, Lauring AS, Neddermann P, De Francesco R, Tai AW. Oxysterol-binding protein is a phosphatidylinositol 4-kinase effector required for HCV replication membrane integrity and cholesterol trafficking. Gastroenterology. 146: 1373-85.e1-11. PMID 24512803 DOI: 10.1053/J.Gastro.2014.02.002  0.301
2013 Lauring AS, Frydman J, Andino R. The role of mutational robustness in RNA virus evolution. Nature Reviews. Microbiology. 11: 327-36. PMID 23524517 DOI: 10.1038/Nrmicro3003  0.395
2012 Lauring AS, Acevedo A, Cooper SB, Andino R. Codon usage determines the mutational robustness, evolutionary capacity, and virulence of an RNA virus. Cell Host & Microbe. 12: 623-32. PMID 23159052 DOI: 10.1016/J.Chom.2012.10.008  0.464
2011 Lauring AS, Andino R. Exploring the fitness landscape of an RNA virus by using a universal barcode microarray. Journal of Virology. 85: 3780-91. PMID 21289109 DOI: 10.1128/Jvi.02217-10  0.437
2010 Lauring AS, Andino R. Quasispecies theory and the behavior of RNA viruses. Plos Pathogens. 6: e1001005. PMID 20661479 DOI: 10.1371/Journal.Ppat.1001005  0.435
2010 Lauring AS, Jones JO, Andino R. Rationalizing the development of live attenuated virus vaccines. Nature Biotechnology. 28: 573-9. PMID 20531338 DOI: 10.1038/Nbt.1635  0.427
2002 Lauring AS, Cheng HH, Eiden MV, Overbaugh J. Genetic and biochemical analyses of receptor and cofactor determinants for T-cell-tropic feline leukemia virus infection. Journal of Virology. 76: 8069-78. PMID 12134012 DOI: 10.1128/Jvi.76.16.8069-8078.2002  0.637
2001 Anderson MM, Lauring AS, Robertson S, Dirks C, Overbaugh J. Feline Pit2 functions as a receptor for subgroup B feline leukemia viruses. Journal of Virology. 75: 10563-72. PMID 11602698 DOI: 10.1128/Jvi.75.22.10563-10572.2001  0.586
2001 Lauring AS, Anderson MM, Overbaugh J. Specificity in receptor usage by T-cell-tropic feline leukemia viruses: implications for the in vivo tropism of immunodeficiency-inducing variants. Journal of Virology. 75: 8888-98. PMID 11533152 DOI: 10.1128/Jvi.75.19.8888-8898.2001  0.579
2000 Lauring AS, Overbaugh J. Evidence that an IRES within the Notch2 coding region can direct expression of a nuclear form of the protein. Molecular Cell. 6: 939-45. PMID 11090631 DOI: 10.1016/S1097-2765(05)00084-5  0.505
2000 Gwynn SR, Hankenson FC, Lauring AS, Rohn JL, Overbaugh J. Feline leukemia virus envelope sequences that affect T-cell tropism and syncytium formation are not part of known receptor-binding domains. Journal of Virology. 74: 5754-61. PMID 10846053 DOI: 10.1128/Jvi.74.13.5754-5761.2000  0.584
2000 Anderson MM, Lauring AS, Burns CC, Overbaugh J. Identification of a cellular cofactor required for infection by feline leukemia virus. Science (New York, N.Y.). 287: 1828-30. PMID 10710311 DOI: 10.1126/Science.287.5459.1828  0.618
1997 Collins RN, Brennwald P, Garrett M, Lauring A, Novick P. Interactions of nucleotide release factor Dss4p with Sec4p in the post-Golgi secretory pathway of yeast. The Journal of Biological Chemistry. 272: 18281-9. PMID 9218467 DOI: 10.1074/Jbc.272.29.18281  0.305
1996 Rohn JL, Gwynn SR, Lauring AS, Linenberger ML, Overbaugh J. Viral genetic variation, AIDS, and the multistep nature of carcinogenesis: the feline leukemia virus model. Leukemia. 10: 1867-9. PMID 8946923  0.572
1996 Rohn JL, Lauring AS, Linenberger ML, Overbaugh J. Transduction of Notch2 in feline leukemia virus-induced thymic lymphoma. Journal of Virology. 70: 8071-80. PMID 8892932 DOI: 10.1128/Jvi.70.11.8071-8080.1996  0.598
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