Matthew P. Nelsen, Ph.D. - Publications

Affiliations: 
2014 Evolutionary Biology University of Chicago, Chicago, IL 
Area:
Systematic Biology

61 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Nelsen MP, Moreau CS, Kevin Boyce C, Ree RH. Macroecological diversification of ants is linked to angiosperm evolution. Evolution Letters. 7: 79-87. PMID 37033878 DOI: 10.1093/evlett/qrad008  0.665
2023 Booher DB, Gotelli NJ, Nelsen MP, Ohyama L, Deyrup M, Moreau CS, Suarez AV. Six decades of museum collections reveal disruption of native ant assemblages by introduced species. Current Biology : Cb. PMID 37030293 DOI: 10.1016/j.cub.2023.03.044  0.408
2022 Phraphuchamnong P, Nelsen MP, Distefano I, Mercado-Diaz JA, Parnmen S, Rangsiruji A, Buaruang K, Lücking R, Lumbsch HT. A new species of (Ramalinaceae, Ascomycota) from Thailand, and recognition of subgenus Catillochroma. Mycokeys. 93: 149-163. PMID 36761912 DOI: 10.3897/mycokeys.93.90962  0.464
2021 Nelsen MP, Leavitt SD, Heller K, Muggia L, Lumbsch HT. Macroecological diversification and convergence in a clade of keystone symbionts. Fems Microbiology Ecology. 97. PMID 34014310 DOI: 10.1093/femsec/fiab072  0.371
2021 Nelsen MP. Sharing and double-dating in the lichen world. Molecular Ecology. PMID 33720470 DOI: 10.1111/mec.15884  0.343
2020 Nelsen MP, Lücking R, Boyce CK, Lumbsch HT, Ree RH. The macroevolutionary dynamics of symbiotic and phenotypic diversification in lichens. Proceedings of the National Academy of Sciences of the United States of America. PMID 32796103 DOI: 10.1073/Pnas.2001913117  0.698
2020 Lindgren H, Moncada B, Lücking R, Magain N, Simon A, Goffinet B, Sérusiaux E, Nelsen MP, Mercado-Díaz JA, Widhelm TJ, Lumbsch HT. Cophylogenetic patterns in algal symbionts correlate with repeated symbiont switches during diversification and geographic expansion of lichen-forming fungi in the genus Sticta (Ascomycota, Peltigeraceae). Molecular Phylogenetics and Evolution. 150: 106860. PMID 32473336 DOI: 10.1016/J.Ympev.2020.106860  0.451
2020 Muggia L, Nelsen MP, Kirika PM, Barreno E, Beck A, Lindgren H, Thorsten Lumbsch H, Leavitt SD. Formally described species woefully underrepresent phylogenetic diversity in the common lichen photobiont genus Trebouxia (Trebouxiophyceae, Chlorophyta): An impetus for developing an integrated taxonomy. Molecular Phylogenetics and Evolution. 106821. PMID 32294545 DOI: 10.1016/J.Ympev.2020.106821  0.53
2019 Nelsen MP, Lücking R, Boyce CK, Lumbsch HT, Ree RH. No support for the emergence of lichens prior to the evolution of vascular plants. Geobiology. PMID 31729136 DOI: 10.1111/Gbi.12369  0.651
2019 Huang JP, Kraichak E, Leavitt SD, Nelsen MP, Lumbsch HT. Accelerated diversifications in three diverse families of morphologically complex lichen-forming fungi link to major historical events. Scientific Reports. 9: 8518. PMID 31253825 DOI: 10.1038/S41598-019-44881-1  0.384
2018 Nelsen MP, Ree RH, Moreau CS. Ant-plant interactions evolved through increasing interdependence. Proceedings of the National Academy of Sciences of the United States of America. PMID 30420513 DOI: 10.1073/Pnas.1719794115  0.628
2018 Leavitt SD, Westberg M, Nelsen MP, Elix JA, Timdal E, Sohrabi M, St Clair LL, Williams L, Wedin M, Lumbsch HT. Multiple, Distinct Intercontinental Lineages but Isolation of Australian Populations in a Cosmopolitan Lichen-Forming Fungal Taxon,(Psoraceae, Ascomycota). Frontiers in Microbiology. 9: 283. PMID 29527197 DOI: 10.3389/Fmicb.2018.00283  0.503
2018 Will-Wolf S, Jovan S, Nelsen MP, Trest MT, Rolih KM, Reis AH. Lichen indices assess local climate and air quality status in the Mid-Atlantic Region, U.S.A. The Bryologist. 121: 461. DOI: 10.1639/0007-2745-121.4.461  0.386
2017 Nelsen MP, Lücking R, Cáceres MES, Aptroot A, Lumbsch HT. Assessing the phylogenetic placement and redundancy of Aspidotheliaceae (Ascomycota), an orphaned family of lichen-forming fungi Systematics and Biodiversity. 15: 63-73. DOI: 10.1080/14772000.2016.1203039  0.406
2016 Sanders WB, Pérez-Ortega S, Nelsen MP, Lücking R, de Los Ríos A. Heveochlorella (Trebouxiophyceae): a little-known genus of unicellular green algae outside the trebouxiales emerges unexpectedly as a major clade of lichen photobionts in foliicolous communities. Journal of Phycology. PMID 27377166 DOI: 10.1111/Jpy.12446  0.458
2016 Leavitt SD, Kraichak E, Vondrak J, Nelsen MP, Sohrabi M, Perez-Ortega S, St Clair LL, Thorsten Lumbsch H. Cryptic diversity and symbiont interactions in rock-posy lichens. Molecular Phylogenetics and Evolution. PMID 27033947 DOI: 10.1016/J.Ympev.2016.03.030  0.516
2016 Nelsen MP, DiMichele WA, Peters SE, Boyce CK. Delayed fungal evolution did not cause the Paleozoic peak in coal production. Proceedings of the National Academy of Sciences of the United States of America. PMID 26787881 DOI: 10.1073/Pnas.1517943113  0.399
2016 LÜCKING R, NELSEN MP, APTROOT A, BARILLAS DE KLEE R, BAWINGAN PA, BENATTI MN, BINH NQ, BUNGARTZ F, CÁCERES MES, CANÊZ LdS, CHAVES J, ERTZ D, ESQUIVEL RE, FERRARO LI, GRIJALVA A, et al. A phylogenetic framework for reassessing generic concepts and species delimitation in the lichenized family Trypetheliaceae (Ascomycota: Dothideomycetes) The Lichenologist. 48: 739-762. DOI: 10.1017/S0024282916000505  0.525
2016 LÜCKING R, NELSEN MP, APTROOT A, BENATTI MN, BINH NQ, GUEIDAN C, GUTIÉRREZ MC, JUNGBLUTH P, LUMBSCH HT, MARCELLI MP, MONCADA B, NAKSUWANKUL K, OROZCO T, SALAZAR-ALLEN N, UPRETI DK. A pot-pourri of new species of Trypetheliaceae resulting from molecular phylogenetic studies The Lichenologist. 48: 639-660. DOI: 10.1017/S0024282916000475  0.31
2016 Luangsuphabool T, Piapukiew J, Parnmen S, Nelsen MP, Lumbsch HT, Sangvichien E. Diversity of the Trypethelium eluteriae group in Thailand (Ascomycota, Trypetheliales) Lichenologist. 48: 53-60. DOI: 10.1017/S0024282915000444  0.469
2016 Mark K, Saag L, Leavitt SD, Will-Wolf S, Nelsen MP, Tõrra T, Saag A, Randlane T, Lumbsch HT. Evaluation of traditionally circumscribed species in the lichen-forming genus Usnea, section Usnea (Parmeliaceae, Ascomycota) using a six-locus dataset Organisms Diversity and Evolution. 1-28. DOI: 10.1007/S13127-016-0273-7  0.506
2015 Divakar PK, Crespo A, Wedin M, Leavitt SD, Hawksworth DL, Myllys L, McCune B, Randlane T, Bjerke JW, Ohmura Y, Schmitt I, Boluda CG, Alors D, Roca-Valiente B, Del-Prado R, ... ... Nelsen M, et al. Evolution of complex symbiotic relationships in a morphologically derived family of lichen-forming fungi. The New Phytologist. PMID 26299211 DOI: 10.1111/Nph.13553  0.447
2015 Leavitt SD, Kraichak E, Nelsen MP, Altermann S, Divakar PK, Alors D, Esslinger TL, Crespo A, Lumbsch T. Fungal specificity and selectivity for algae play a major role in determining lichen partnerships across diverse ecogeographic regions in the lichen-forming family Parmeliaceae (Ascomycota). Molecular Ecology. 24: 3779-97. PMID 26073165 DOI: 10.1111/Mec.13271  0.501
2015 Kraichak E, Divakar PK, Crespo A, Leavitt SD, Nelsen MP, Lücking R, Lumbsch HT. A Tale of Two Hyper-diversities: Diversification dynamics of the two largest families of lichenized fungi. Scientific Reports. 5: 10028. PMID 25944223 DOI: 10.1038/Srep10028  0.501
2015 Will-Wolf S, Makholm MM, Nelsen MP, Trest MT, Reis AH, Jovan S. Element analysis of two common macrolichens supports bioindication of air pollution and lichen response in rural midwestern U.S.A Bryologist. 118: 371-384. DOI: 10.1639/0007-2745-118.4.371  0.408
2015 Kraichak E, Lücking R, Aptroot A, Beck A, Dornes P, John V, Lendemer JC, Nelsen MP, Neuwirth G, Nutakki A, Parnmen S, Sohrabi M, Tønsberg T, Lumbsch HT. Hidden diversity in the morphologically variable script lichen (Graphis scripta) complex (Ascomycota, Ostropales, Graphidaceae) Organisms Diversity and Evolution. 15: 447-458. DOI: 10.1007/S13127-015-0219-5  0.49
2014 Wijayawardene NN, Crous PW, Kirk PM, Hawksworth DL, Boonmee S, Braun U, Dai DQ, D'souza MJ, Diederich P, Dissanayake A, Doilom M, Hongsanan S, Jones EB, Groenewald JZ, Jayawardena R, ... ... Nelsen MP, et al. Naming and outline of Dothideomycetes-2014 including proposals for the protection or suppression of generic names. Fungal Diversity. 69: 1-55. PMID 27284275 DOI: 10.1007/S13225-014-0309-2  0.462
2014 Altermann S, Leavitt SD, Goward T, Nelsen MP, Lumbsch HT. How do you solve a problem like Letharia? A new look at cryptic species in lichen-forming fungi using Bayesian clustering and SNPs from multilocus sequence data. Plos One. 9: e97556. PMID 24831224 DOI: 10.1371/Journal.Pone.0097556  0.42
2014 Dal Grande F, Beck A, Cornejo C, Singh G, Cheenacharoen S, Nelsen MP, Scheidegger C. Molecular phylogeny and symbiotic selectivity of the green algal genus Dictyochloropsis s.l. (Trebouxiophyceae): a polyphyletic and widespread group forming photobiont-mediated guilds in the lichen family Lobariaceae. The New Phytologist. 202: 455-70. PMID 24443895 DOI: 10.1111/Nph.12678  0.497
2014 Nelsen MP, Lücking R, Aptroot A, Andrew CJ, Cáceres M, Plata ER, Gueidan C, da Silva Canêz L, Knight A, Ludwig LR, Mercado-Díaz JA, Parnmen S, Thorsten Lumbsch H. Elucidating phylogenetic relationships and genus-level classification within the fungal family Trypetheliaceae (Ascomycota: Dothideomycetes) Taxon. 63: 974-992. DOI: 10.12705/635.9  0.527
2014 Nelsen MP, Lücking R, Andrew CJ, Aptroot A, Cáceres MES, Mercado-Díaz JA, Plata ER, Lumbsch HT. Molecular phylogeny reveals the true colours of Myeloconidaceae (Ascomycota: Ostropales) Australian Systematic Botany. 27: 38-47. DOI: 10.1071/Sb13040  0.465
2013 Cáceres MES, Aptroot A, Nelsen MP, Lücking R. Pyrenula sanguinea (lichenized Ascomycota: Pyrenulaceae), a new species with unique, trypethelioid ascomata and complex pigment chemistry Bryologist. 116: 350-357. DOI: 10.1639/0007-2745-116.4.350  0.491
2013 Leavitt SD, Nelsen MP, Lumbsch HT, Johnson LA, St. Clair LL. Symbiont flexibility in subalpine rock shield lichen communities in the Southwestern USA The Bryologist. 116: 149. DOI: 10.1639/0007-2745-116.2.149  0.469
2013 Lücking R, Breuss O, Nelsen MP, Navarro E, Aptroot A, Chaves JL, Trest M, Will-Wolf S. Porina squamulifera(Lichenized Ascomycota: Porinaceae), a New Species from Tropical Rainforest in Costa Rica With Unique Thallus Morphology Herzogia. 26: 223-230. DOI: 10.13158/Heia.26.2.2013.223  0.409
2013 Lücking R, Dal-Forno M, Lawrey JD, Bungartz F, Holgado Rojas ME, Hernández JEM, Marcelli MP, Moncada B, Morales EA, Nelsen MP, Paz E, Salcedo L, Spielmann AA, Wilk K, Will-Wolf S, et al. Ten new species of lichenized Basidiomycota in the genera Dictyonema and Cora (Agaricales: Hygrophoraceae), with a key to all accepted genera and species in the Dictyonema clade Phytotaxa. 139: 1-38. DOI: 10.11646/Phytotaxa.139.1.1  0.358
2013 Nelsen MP, Thell A, Leavitt SD, Hampton-Miller CJ, Lumbsch HT. A reappraisal of Masonhalea (Parmeliaceae, Lecanorales) based on molecular and morphological data Lichenologist. 45: 729-738. DOI: 10.1017/S0024282913000509  0.386
2013 Leavitt SD, Esslinger TL, Nelsen MP, Lumbsch HT. Further species diversity in Neotropical Oropogon (Lecanoromycetes: Parmeliaceae) in Central America Lichenologist. 45: 553-564. DOI: 10.1017/S0024282913000212  0.446
2013 Hyde KD, Jones EBG, Liu JK, Ariyawansa H, Boehm E, Boonmee S, Braun U, Chomnunti P, Crous PW, Dai DQ, Diederich P, Dissanayake A, Doilom M, Doveri F, Hongsanan S, ... ... Nelsen MP, et al. Families of Dothideomycetes: In loving memory of Majorie Phyllis Hyde (affectionately known as Mum or Marj), 29 August 1921-18 January 2013 - Without mum's determination, a character passed on to children, this treatise would never have been completed - K.D. Hyde Fungal Diversity. 63: 1-313. DOI: 10.1007/S13225-013-0263-4  0.442
2012 Nelsen MP, Lcking R, Andrew CJ, Plata ER, Chaves JL, Cceres MES, Ventura N. Dismantling Herpothallon: Herpothallon antillarum (Arthoniomycetes: Arthoniaceae) is a member of the genus Diorygma (Lecanoromycetes: Graphidaceae) Bryologist. 115: 313-321. DOI: 10.1639/0007-2745-115.2.313  0.422
2012 Sweetwood G, Lücking R, Nelsen MP, Aptroot A. Ascospore ontogeny and discharge in megalosporous Trypetheliaceae and Graphidaceae (Ascomycota: Dothideomycetes and Lecanoromycetes) suggest phylogenetic relationships and ecological constraints Lichenologist. 44: 277-296. DOI: 10.1017/S0024282911000740  0.494
2012 Lawrey JD, Diederich P, Nelsen MP, Freebury C, Van Den Broeck D, Sikaroodi M, Ertz D. Phylogenetic placement of lichenicolous Phoma species in the Phaeosphaeriaceae (Pleosporales, Dothideomycetes) Fungal Diversity. 55: 195-213. DOI: 10.1007/S13225-012-0166-9  0.526
2011 Nelsen MP, Plata ER, Andrew CJ, Lücking R, Lumbsch HT. PHYLOGENETIC DIVERSITY OF TRENTEPOHLIALEAN ALGAE ASSOCIATED WITH LICHEN-FORMING FUNGI(1). Journal of Phycology. 47: 282-90. PMID 27021860 DOI: 10.1111/J.1529-8817.2011.00962.X  0.48
2011 Lawrey JD, Diederich P, Nelsen MP, Sikaroodi M, Gillevet PM, Brand AM, van den Boom P. The obligately lichenicolous genus Lichenoconium represents a novel lineage in the Dothideomycetes. Fungal Biology. 115: 176-87. PMID 21315315 DOI: 10.1016/J.Funbio.2010.12.002  0.552
2011 Lumbsch HT, Ahti T, Altermann S, De Paz GA, Aptroot A, Arup U, Pena AB, Bawingan PA, Benatti MN, Betancourt L, Bjork CR, Boonpragob K, Brand M, Bungartz F, Caceres MES, ... ... Nelsen MP, et al. One hundred new species of lichenized fungi: a signature of undiscovered global diversity Phytotaxa. 18: 1. DOI: 10.11646/Phytotaxa.18.1.1  0.337
2011 Thüs H, Muggia L, Pérez-Ortega S, Favero-Longo SE, Joneson S, O’Brien H, Nelsen MP, Duque-Thüs R, Grube M, Friedl T, Brodie J, Andrew CJ, Lücking R, Lutzoni F, Gueidan C. Revisiting photobiont diversity in the lichen family Verrucariaceae (Ascomycota) European Journal of Phycology. 46: 399-415. DOI: 10.1080/09670262.2011.629788  0.429
2011 Nelsen MP, Chavez N, Sackett-Hermann E, Thell A, Randlane T, Divakar PK, Rico VJ, Lumbsch HT. The cetrarioid core group revisited (Lecanorales: Parmeliaceae) Lichenologist. 43: 537-551. DOI: 10.1017/S0024282911000508  0.386
2011 Nelsen MP, Lücking R, Mbatchou JS, Andrew CJ, Spielmann AA, Lumbsch HT. New insights into relationships of lichen-forming Dothideomycetes Fungal Diversity. 51: 155-162. DOI: 10.1007/S13225-011-0144-7  0.5
2010 Nelsen MP, Lücking R, Plata ER, Mbatchou JS. Heiomasia, a new genus in the lichen-forming family Graphidaceae (Ascomycota: Lecanoromycetes: Ostropales) with disjunct distribution in Southeastern North America and Southeast Asia Bryologist. 113: 742-751. DOI: 10.1639/0007-2745-113.4.742  0.494
2009 Schmitt I, Crespo A, Divakar PK, Fankhauser JD, Herman-Sackett E, Kalb K, Nelsen MP, Nelson NA, Rivas-Plata E, Shimp AD, Widhelm T, Lumbsch HT. New primers for promising single-copy genes in fungal phylogenetics and systematics. Persoonia. 23: 35-40. PMID 20198159 DOI: 10.3767/003158509X470602  0.371
2009 Schoch CL, Crous PW, Groenewald JZ, Boehm EW, Burgess TI, de Gruyter J, de Hoog GS, Dixon LJ, Grube M, Gueidan C, Harada Y, Hatakeyama S, Hirayama K, Hosoya T, Huhndorf SM, ... ... Nelsen MP, et al. A class-wide phylogenetic assessment of Dothideomycetes. Studies in Mycology. 64: 1-15S10. PMID 20169021 DOI: 10.3114/Sim.2009.64.01  0.387
2009 Nelsen MP, Lücking R, Grube M, Mbatchou JS, Muggia L, Plata ER, Lumbsch HT. Unravelling the phylogenetic relationships of lichenised fungi in Dothideomyceta Studies in Mycology. 64: 135-144. DOI: 10.3114/Sim.2009.64.07  0.417
2009 Nelsen MP, Gargas A. Symbiont flexibility in Thamnolia vermicularis (Pertusariales: Icmadophilaceae) Bryologist. 112: 404-417. DOI: 10.1639/0007-2745-112.2.404  0.45
2009 Nelsen MP, Gargas A. Assessing clonality and chemotype monophyly in Thamnolia (Icmadophilaceae) Bryologist. 112: 42-53. DOI: 10.1639/0007-2745-112.1.42  0.357
2008 Nelsen MP, Gargas A. Dissociation and horizontal transmission of codispersing lichen symbionts in the genus Lepraria (Lecanorales: Stereocaulaceae). The New Phytologist. 177: 264-75. PMID 17944828 DOI: 10.1111/J.1469-8137.2007.02241.X  0.461
2008 Nelsen MP, Lumbsch HT, Lücking R, Elix JA. Further evidence for the polyphyly of Lepraria (Lecanorales: Stereocaulaceae) Nova Hedwigia. 87: 361-371. DOI: 10.1127/0029-5035/2008/0087-0361  0.484
2008 Nelsen MP, Gargas A. Phylogenetic distribution and evolution of secondary metabolites in the lichenized fungal genus Lepraria (Lecanorales: Stereocaulaceae) Nova Hedwigia. 86: 115-131. DOI: 10.1127/0029-5035/2008/0086-0115  0.336
2008 Lumbsch HT, Nelsen MP, Lücking R. The phylogenetic position of Haematommataceae (Lecanorales, Ascomycota), with notes on secondary chemistry and species delimitation Nova Hedwigia. 86: 105-114. DOI: 10.1127/0029-5035/2008/0086-0105  0.504
2007 Nelsen MP, Lücking R, Umaña L, Trest MT, Will-Wolf S, Chaves JL, Gargas A. Multiclavula ichthyiformis (Fungi: Basidiomycota: Cantharellales: Clavulinaceae), a remarkable new basidiolichen from Costa Rica. American Journal of Botany. 94: 1289-96. PMID 21636495 DOI: 10.3732/Ajb.94.8.1289  0.474
2006 Nelsen MP, Gargas A. Actin type I introns offer potential for increasing phylogenetic resolution in Asterochloris (Chlorophyta: Trebouxiophyceae) Lichenologist. 38: 435-440. DOI: 10.1017/S0024282906005779  0.382
2006 Nelsen MP, Lücking R, Chaves JL, Sipman HJM, Umaña L, Navarro E. A first assessment of the Ticolichen biodiversity inventory in Costa Rica: The genus Haematomma (Lecanorales: Lecanoraceae) Lichenologist. 38: 251-262. DOI: 10.1017/S0024282906005573  0.442
2006 Lücking R, Aptroot A, Umaña L, Chaves JL, Sipman HJM, Nelsen MP. A first assessment of the Ticolichen biodiversity inventory in Costa Rica: The genus Gyalideopsis and its segregates (Ostropales: Gomphillaceae), with a world-wide key and name status checklist Lichenologist. 38: 131-160. DOI: 10.1017/S0024282905005657  0.325
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