Alan L. Shanks - Publications

Affiliations: 
Oregon Institute of Marine Biology, Coos Bay, OR, United States 
Area:
Larval dispersal, biological oceanography

86 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Ashton GV, Freestone AL, Duffy JE, Torchin ME, Sewall BJ, Tracy B, Albano M, Altieri AH, Altvater L, Bastida-Zavala R, Bortolus A, Brante A, Bravo V, Brown N, Buschmann AH, ... ... Shanks A, et al. Predator control of marine communities increases with temperature across 115 degrees of latitude. Science (New York, N.Y.). 376: 1215-1219. PMID 35679394 DOI: 10.1126/science.abc4916  0.753
2020 Boulding E, Behrens Yamada S, Schooler S, Shanks A. Periodic invasions during El Niño events by the predatory lined shore crab (Pachygrapsus crassipes): forecasted effects of its establishment on direct-developing indigenous prey species (Littorina spp.) Canadian Journal of Zoology. 98: 787-797. DOI: 10.1139/Cjz-2019-0250  0.38
2020 van Sebille E, Aliani S, Law KL, Maximenko N, Alsina JM, Bagaev A, Bergmann M, Chapron B, Chubarenko I, Cózar A, Delandmeter P, Egger M, Fox-Kemper B, Garaba SP, Goddijn-Murphy L, ... ... Shanks AL, et al. The physical oceanography of the transport of floating marine debris Environmental Research Letters. 15: 023003. DOI: 10.1088/1748-9326/Ab6D7D  0.365
2020 Rasmuson LK, Shanks AL. Revisiting cross-shelf transport of Dungeness crab (Metacarcinus magister) megalopae by the internal tide using 16 years of daily abundance data Journal of Experimental Marine Biology and Ecology. 527: 151334. DOI: 10.1016/J.Jembe.2020.151334  0.377
2019 Conser E, Shanks AL. Density of benthic macroalgae in the intertidal zone varies with surf zone hydrodynamics Phycologia. 58: 254-259. DOI: 10.1080/00318884.2018.1557917  0.366
2019 Brown JA, MacMahan JH, Reniers AJ, Thornton EB, Shanks AL, Morgan SG, Gallagher EL. Observations of mixing and transport on a steep beach Continental Shelf Research. 178: 1-14. DOI: 10.1016/J.Csr.2019.03.009  0.337
2019 Shanks AL, Rasmuson LK, Valley JR, Jarvis MA, Salant C, Sutherland DA, Lamont EI, Hainey MAH, Emlet RB. Marine heat waves, climate change, and failed spawning by coastal invertebrates Limnology and Oceanography. 65: 627-636. DOI: 10.1002/Lno.11331  0.613
2018 Salant CD, Shanks AL. Surfzone hydrodynamics alter phytoplankton subsidies affecting reproductive output and growth of tidal filter feeders. Ecology. PMID 29888460 DOI: 10.1002/Ecy.2415  0.387
2018 Fujimura AG, Reniers AJHM, Paris CB, Shanks AL, MacMahan JH, Morgan SG. Mechanisms of Cross-Shore Transport and Spatial Variability of Phytoplankton on a Rip-Channeled Beach Frontiers in Marine Science. 5. DOI: 10.3389/Fmars.2018.00183  0.39
2017 Morgan SG, Shanks AL, MacMahan JH, Reniers AJHM, Feddersen F. Planktonic Subsidies to Surf-Zone and Intertidal Communities. Annual Review of Marine Science. PMID 28846492 DOI: 10.1146/Annurev-Marine-010816-060514  0.401
2017 Fujimura A, Reniers A, Paris C, Shanks A, MacMahan J, Morgan S. Numerical simulations of onshore transport of larvae and detritus to a steep pocket beach Marine Ecology Progress Series. 582: 33-43. DOI: 10.3354/Meps12331  0.356
2017 Shanks AL, Sheesley P, Johnson L. Phytoplankton subsidies to the inter-tidal zone are strongly affected by surf-zone hydrodynamics Marine Ecology. 38: e12441. DOI: 10.1111/Maec.12441  0.44
2017 Shanks AL, Morgan SG, MacMahan J, Reniers AJ, Jarvis M, Brown J, Fujimura A, Ziccarelli L, Griesemer C. Persistent Differences in Horizontal Gradients in Phytoplankton Concentration Maintained by Surf Zone Hydrodynamics Estuaries and Coasts. 41: 158-176. DOI: 10.1007/S12237-017-0278-2  0.69
2017 Morgan SG, Shanks AL, MacMahan J, Reniers AJHM, Griesemer CD, Jarvis M, Fujimura AG. Surf zones regulate larval supply and zooplankton subsidies to nearshore communities Limnology and Oceanography. 62: 2811-2828. DOI: 10.1002/Lno.10609  0.703
2017 Shanks AL, Morgan SG. Testing the intermittent upwelling hypothesis: upwelling, downwelling, and subsidies to the intertidal zone Ecological Monographs. 88: 22-35. DOI: 10.1002/Ecm.1281  0.444
2017 Shanks AL, Morgan SG, MacMahan J, Reniers AJHM. Alongshore variation in barnacle populations is determined by surf zone hydrodynamics Ecological Monographs. 87: 508-532. DOI: 10.1002/Ecm.1265  0.424
2016 Shanks AL, Morgan SG, MacMahan J, Reniers AJ, Kudela R, Jarvis M, Brown J, Fujimura A, Ziccarelli L, Griesemer C. Variation in the abundance of Pseudo-nitzschia and domoic acid with surf zone type. Harmful Algae. 55: 172-178. PMID 28073530 DOI: 10.1016/J.Hal.2016.03.004  0.657
2016 Morgan SG, Shanks AL, Fujimura AG, Reniers AJ, MacMahan J, Griesemer CD, Jarvis M, Brown J. Surfzone hydrodynamics as a key determinant of spatial variation in rocky intertidal communities. Proceedings. Biological Sciences. 283. PMID 27733543 DOI: 10.1098/Rspb.2016.1017  0.687
2016 Pritchard C, Rimler R, Rumrill S, Emlet R, Shanks A. Variation in larval supply and recruitment of Ostrea lurida in the Coos Bay estuary, Oregon, USA Marine Ecology Progress Series. 560: 159-171. DOI: 10.3354/Meps11894  0.731
2015 Peteiro LG, Shanks AL. Up and down or how to stay in the bay: Retentive strategies of Olympia oyster larvae in a shallow estuary Marine Ecology Progress Series. 530: 103-117. DOI: 10.3354/Meps11283  0.335
2015 Shanks AL, MacMahan J, Morgan SG, Reniers AJHM, Jarvis M, Brown J, Fujimura A, Griesemer C. Transport of larvae and detritus across the surf zone of a steep reflective pocket beach Marine Ecology Progress Series. 528: 71-86. DOI: 10.3354/Meps11223  0.69
2015 Pritchard C, Shanks A, Rimler R, Oates M, Rumrill S. The olympia oyster ostrea lurida: Recent advances in natural history, ecology, and restoration Journal of Shellfish Research. 34: 259-271. DOI: 10.2983/035.034.0207  0.708
2014 Fujimura AG, Reniers AJHM, Paris CB, Shanks AL, MacMahan JH, Morgan SG. Numerical simulations of larval transport into a rip-channeled surf zone Limnology and Oceanography. 59: 1434-1447. DOI: 10.4319/Lo.2014.59.4.1434  0.33
2014 Rasmuson LK, Shanks AL. In situ observations of Dungeness crab megalopae used to estimate transport distances by internal waves Marine Ecology Progress Series. 511: 143-152. DOI: 10.3354/Meps10926  0.321
2014 Shanks AL, Morgan SG, MacMahan J, Reniers AJHM, Reniers M, Brown J, Fujimura A, Griesemer C. Onshore transport of plankton by internal tides and upwelling-relaxation events Marine Ecology Progress Series. 502: 39-51. DOI: 10.3354/Meps10717  0.342
2014 Shanks AL, Walser A, Shanks L. Population structure, northern range limit, and recruitment variation in the intertidal limpet Lottia scabra Marine Biology. 161: 1073-1086. DOI: 10.1007/S00227-014-2400-3  0.334
2013 Leis JM, Caselle JE, Bradbury IR, Kristiansen T, Llopiz JK, Miller MJ, O'Connor MI, Paris CB, Shanks AL, Sogard SM, Swearer SE, Treml EA, Vetter RD, Warner RR. Does fish larval dispersal differ between high and low latitudes? Proceedings. Biological Sciences / the Royal Society. 280: 20130327. PMID 23516247 DOI: 10.1098/Rspb.2013.0327  0.414
2012 Lord JP, Shanks AL. Continuous growth facilitates feeding and reproduction: Impact of size on energy allocation patterns for organisms with indeterminate growth Marine Biology. 159: 1417-1428. DOI: 10.1007/S00227-012-1918-5  0.645
2011 Shanks AL, Shearman RK. Thread-drifting juvenile mytilus spp. in continental shelf waters off coos bay, oregon, USA Marine Ecology Progress Series. 427: 105-115. DOI: 10.3354/Meps09057  0.371
2011 Cooper EE, Shanks AL. Latitude and coastline shape correlate with age-structure of Chlorostoma (Tegula) funebralis populations Marine Ecology Progress Series. 424: 133-143. DOI: 10.3354/Meps08993  0.652
2011 Marin Jarrin JR, Shanks AL. Spatio-temporal dynamics of the surf-zone faunal assemblages at a Southern Oregon sandy beach Marine Ecology. 32: 232-242. DOI: 10.1111/J.1439-0485.2010.00414.X  0.472
2010 Shanks AL, Morgan SG, MacMahan J, Reniers AJHM. Surf zone physical and morphological regime as determinants of temporal and spatial variation in larval recruitment Journal of Experimental Marine Biology and Ecology. 392: 140-150. DOI: 10.1016/J.Jembe.2010.04.018  0.431
2010 Davidson TM, Shanks AL, Rumrill SS. The composition and density of fauna utilizing burrow microhabitats created by a non-native burrowing crustacean (Sphaeroma quoianum) Biological Invasions. 12: 1403-1413. DOI: 10.1007/S10530-009-9556-7  0.764
2010 Shanks A, Roegner GC, Miller J. Using megalopae abundance to predict future commercial catches of Dungeness crabs (Cancer magister) in Oregon California Cooperative Oceanic Fisheries Investigations Reports. 51: 106-118.  0.412
2009 Shanks AL. Pelagic larval duration and dispersal distance revisited. The Biological Bulletin. 216: 373-85. PMID 19556601 DOI: 10.1086/Bblv216N3P373  0.304
2009 Emlet RB, Maslakova SA, Shanks AL, Young CM. Biological bulletin virtual symposium: biology of marine invertebrate larvae. The Biological Bulletin. 216: 201-2. PMID 19556588 DOI: 10.1086/Bblv216N3P201  0.363
2009 Shanks AL. Barnacle settlement versus recruitment as indicators of larval delivery. I. Effects of post-settlement mortality and recruit density Marine Ecology Progress Series. 385: 205-216. DOI: 10.3354/Meps08105  0.338
2009 Shanks AL, Shearman RK. Paradigm lost? Cross-shelf distributions of intertidal invertebrate larvae are unaffected by upwelling or downwelling Marine Ecology Progress Series. 385: 189-204. DOI: 10.3354/Meps08043  0.384
2009 Shanks AL. Barnacle settlement versus recruitment as indicators of larval delivery. II. Time-series analysis and hypothesized delivery mechanisms Marine Ecology Progress Series. 385: 217-226. DOI: 10.3354/Meps08002  0.355
2009 Marin Jarrin JR, Shanks AL, Banks MA. Confirmation of the presence and use of sandy beach surf-zones by juvenile Chinook salmon Environmental Biology of Fishes. 85: 119-125. DOI: 10.1007/S10641-009-9470-Y  0.401
2009 Shanks AL, Pfister CA. Annual recruitment of three species of tide-pool fishes is driven by variation in springtime coastal hydrodynamics Limnology and Oceanography. 54: 1481-1487.  0.303
2008 Marin Jarrin JR, Shanks AL. Ecology of a population of Lissocrangon stylirostris (Caridea: Crangonidae), with notes on the occurrence and biology of its parasite, Argeia pugettensis (Isopoda: Bopyridae) Journal of Crustacean Biology. 28: 613-621. DOI: 10.1651/08-2976.1  0.313
2008 Davidson TM, Rumrill SS, Shanks AL. Colonization and substratum preference of an introduced burrowing crustacean in a temperate estuary Journal of Experimental Marine Biology and Ecology. 354: 144-149. DOI: 10.1016/J.Jembe.2007.10.015  0.762
2007 Shanks AL, Roegner GC. Recruitment limitation in Dungeness crab populations is driven by variation in atmospheric forcing. Ecology. 88: 1726-37. PMID 17645019 DOI: 10.1890/06-1003.1  0.378
2007 Roegner GC, Armstrong DA, Shanks AL. Wind and tidal influences on larval crab recruitment to an Oregon estuary Marine Ecology Progress Series. 351: 177-188. DOI: 10.3354/Meps07130  0.366
2006 Shanks AL. Mechanisms of cross-shelf transport of crab megalopae inferred from a time series of daily abundance Marine Biology. 148: 1383-1398. DOI: 10.1007/S00227-005-0162-7  0.375
2005 Miller JA, Shanks AL. Abundance and distribution of larval and juvenile fish in Coos Bay, Oregon: Time-series analysis based on light-trap collections Marine Ecology Progress Series. 305: 177-191. DOI: 10.3354/Meps305177  0.612
2005 Shanks AL, Brink L. Upwelling, downwelling, and cross-shelf transport of bivalve larvae: Test of a hypothesis Marine Ecology Progress Series. 302: 1-12. DOI: 10.3354/Meps302001  0.398
2005 Shanks AL, Eckert GL. Population persistence of California Current fishes and benthic crustaceans: A marine drift paradox Ecological Monographs. 75: 505-524. DOI: 10.1890/05-0309  0.402
2005 Miller JA, Banks MA, Gomez-Uchida D, Shanks AL. A comparison of population structure in black rockfish (Sebastes melanops) as determined with otolith microchemistry and microsatellite DNA Canadian Journal of Fisheries and Aquatic Sciences. 62: 2189-2198. DOI: 10.1139/F05-133  0.5
2004 Miller JA, Shanks AL. Ocean-estuary coupling in the Oregon upwelling region: Abundance and transport of juvenile fish and of crab megalopae Marine Ecology Progress Series. 271: 267-279. DOI: 10.3354/Meps271267  0.598
2004 Miller JA, Shanks AL. Evidence for limited larval dispersal in black rockfish (Sebastes melanops): Implications for population structure and marine-reserve design Canadian Journal of Fisheries and Aquatic Sciences. 61: 1723-1735. DOI: 10.1139/F04-111  0.591
2003 Johnson KB, Shanks AL. Low rates of predation on planktonic marine invertebrate larvae Marine Ecology Progress Series. 248: 125-139. DOI: 10.3354/Meps248125  0.385
2003 Shanks AL, Grantham BA, Carr MH. Propagule dispersal distance and the size and spacing of marine reserves Ecological Applications. 13: S159-S169. DOI: 10.1890/1051-0761(2003)013[0159:Pddats]2.0.Co;2  0.338
2003 Grantham BA, Eckert GL, Shanks AL. Dispersal potential of marine invertebrates in diverse habitats Ecological Applications. 13: S108-S116. DOI: 10.1890/1051-0761(2003)013[0108:Dpomii]2.0.Co;2  0.414
2003 Mcculloch A, Shanks AL. Topographically generated fronts, very nearshore oceanography and the distribution and settlement of mussel larvae and barnacle cyprids Journal of Plankton Research. 25: 1427-1439. DOI: 10.1093/Plankt/Fbg098  0.382
2003 Shanks AL, Mcculloch A, Miller J. Topographically generated fronts, very nearshore oceanography and the distribution of larval invertebrates and holoplankters Journal of Plankton Research. 25: 1251-1277. DOI: 10.1093/Plankt/Fbg090  0.561
2003 Shanks AL, Largier J, Brubaker J. Observations on the distribution of meroplankton during an upwelling event Journal of Plankton Research. 25: 645-667. DOI: 10.1093/Plankt/25.6.645  0.322
2003 Shanks AL, McCulloch A. Fortnightly periodicity in the abundance of diatom and dinoflagellate taxa at a coastal study site Journal of Experimental Marine Biology and Ecology. 296: 113-126. DOI: 10.1016/S0022-0981(03)00320-4  0.369
2003 Shanks AL, McCulloch A. Topographically generated fronts, very nearshore oceanography, and the distribution of chlorophyll, detritus, and selected diatom and dinoflagellate taxa Marine Biology. 143: 969-980. DOI: 10.1007/S00227-003-1140-6  0.408
2003 Curtis Roegner G, Armstrong DA, Hickey BM, Shanks AL. Ocean distribution of dungeness crab megalopae and recruitment patterns to estuaries in Southern Washington State Estuaries. 26: 1058-1070. DOI: 10.1007/Bf02803363  0.397
2002 Roegner GC, Hickey BM, Newton JA, Shanks AL, Armstrong DA. Wind-induced plume and bloom intrusions into Willapa Bay, Washington Limnology and Oceanography. 47: 1033-1042. DOI: 10.4319/Lo.2002.47.4.1033  0.36
2002 Shanks AL, Largier J, Brink L, Brubaker J, Hooff R. Observations on the distribution of meroplankton during a downwelling event and associated intrusion of the Chesapeake Bay estuarine plume Journal of Plankton Research. 24: 391-416. DOI: 10.1093/Plankt/24.4.391  0.351
2002 Johnson J, Shanks AL. Time series of the abundance of the post-larvae of the crabs Cancer magister and cancer spp. on the Southern Oregon coast and their cross-shelf transport Estuaries. 25: 1138-1142. DOI: 10.1007/Bf02692211  0.406
2001 Roegner GC, Shanks AL. Import of coastally-derived chlorophyll a to South Slough, Oregon Estuaries. 24: 244-256. DOI: 10.2307/1352948  0.43
2000 Shanks AL, Largier J, Brink L, Brubaker J, Hooff R. Demonstration of the onshore transport of larval invertebrates by the shoreward movement of an upwelling front Limnology and Oceanography. 45: 230-236. DOI: 10.4319/Lo.2000.45.1.0230  0.377
1999 Amend M, Shanks A. Timing of larval release in the mole crab Emerita talpoida Marine Ecology Progress Series. 183: 295-300. DOI: 10.3354/Meps183295  0.341
1998 Shanks AL. Abundance of post-larval Callinectes sapidus, Penaeus spp., Uca spp., and Libinia spp. collected at an outer coastal site and their cross-shelf transport Marine Ecology Progress Series. 168: 57-69. DOI: 10.3354/Meps168057  0.341
1998 Shanks AL. Apparent oceanographic triggers to the spawning of the limpet Lottia digitalis (Rathke) Journal of Experimental Marine Biology and Ecology. 222: 31-41. DOI: 10.1016/S0022-0981(97)00135-4  0.421
1997 Johnson KB, Shanks AL. The importance of prey densities and background plankton in studies of predation on invertebrate larvae Marine Ecology Progress Series. 158: 293-296. DOI: 10.3354/Meps158293  0.335
1997 Shanks AL, Walters K. Holoplankton, meroplankton, and meiofauna associated with marine snow Marine Ecology Progress Series. 156: 75-86. DOI: 10.3354/Meps156075  0.328
1996 Shanks A, Walters K. Feeding by a heterotrophic dinoflagellate (Noctiluca scintillans) in marine snow Limnology and Oceanography. 41: 177-181. DOI: 10.4319/Lo.1996.41.1.0177  0.317
1996 Walters K, Shanks AL. Complex trophic and nontrophic interactions between meiobenthic copepods and marine snow Journal of Experimental Marine Biology and Ecology. 198: 131-145. DOI: 10.1016/0022-0981(95)00179-4  0.34
1995 Wright WG, Shanks AL. Interspecific association between bail-out behavior and habitat is geographically and phylogenetically widespread Journal of Experimental Marine Biology and Ecology. 188: 133-143. DOI: 10.1016/0022-0981(94)00196-K  0.36
1995 Shanks AL. Orientated swimming by megalopae of several eastern North Pacific crab species and its potential role in their onshore migration Journal of Experimental Marine Biology and Ecology. 186: 1-16. DOI: 10.1016/0022-0981(94)00144-3  0.38
1990 Shanks AL, Edmondson EW. The vertical flux of metazoans (holoplankton, meiofauna, and larval invertebrates) due to their association with marine snow Limnology & Oceanography. 35: 455-463. DOI: 10.4319/Lo.1990.35.2.0455  0.326
1989 Shanks AL, Edmondson EW. Laboratory-made artificial marine snow: a biological model of the real thing Marine Biology. 101: 463-470. DOI: 10.1007/Bf00541648  0.302
1988 Shanks A, Graham W. Chemical defense in a scyphomedusa Marine Ecology Progress Series. 45: 81-86. DOI: 10.3354/Meps045081  0.535
1987 Wells JT, Shanks AL. Observations and geologic significance of marine snow in a shallow-water, partially enclosed marine embayment Journal of Geophysical Research. 92: 13,185-13,190. DOI: 10.1029/Jc092Ic12P13185  0.409
1987 Shanks AL, Graham WM. Orientated swimming in the jellyfish Stomolopus meleagris L. Agassiz (Scyphozoan: Rhizostomida) Journal of Experimental Marine Biology and Ecology. 108: 159-169. DOI: 10.1016/S0022-0981(87)80020-5  0.607
1986 Shanks AL, Wright WG. Adding teeth to wave action: the destructive effects of wave-borne rocks on intertidal organisms. Oecologia. 69: 420-428. PMID 28311345 DOI: 10.1007/Bf00377065  0.377
1986 Shanks AL. Tidal periodicity in the daily settlement of intertidal barnacle larvae and an hypothesized mechanism for the cross-shelf transport of cyprids. Biological Bulletin. 170: 429-440. DOI: 10.2307/1541852  0.353
1986 Shanks AL. Vertical migration and cross-shelf dispersal of larval Cancer spp. and Randallia ornata (Crustacea: Brachyura) off the coast of southern California Marine Biology: International Journal On Life in Oceans and Coastal Waters. 92: 189-199. DOI: 10.1007/Bf00392836  0.339
1983 Shanks A. Surface slicks associated with tidally forced internal waves may transport pelagic larvae of benthic invertebrates and fishes shoreward Marine Ecology Progress Series. 13: 311-315. DOI: 10.3354/Meps013311  0.316
1978 Silver MW, Shanks AL, Trent JD. Marine snow: microplankton habitat and source of small-scale patchiness in pelagic populations. Science (New York, N.Y.). 201: 371-3. PMID 17793735 DOI: 10.1126/Science.201.4353.371  0.352
1976 Mattison JE, Trent JD, Shanks AL, Akin TB, Pearse JS. Movement and feeding activity of red sea urchins (Strongylocentrotus franciscanus) adjacent to a kelp forest Marine Biology. 39: 25-30. DOI: 10.1007/Bf00395589  0.302
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