| Year |
Citation |
Score |
| 2021 |
Njau EP, Domelevo Entfellner JB, Machuka EM, Bochere EN, Cleaveland S, Shirima GM, Kusiluka LJ, Upton C, Bishop RP, Pelle R, Okoth EA. The first genotype II African swine fever virus isolated in Africa provides insight into the current Eurasian pandemic. Scientific Reports. 11: 13081. PMID 34158551 DOI: 10.1038/s41598-021-92593-2 |
0.4 |
|
| 2019 |
Doty JB, Maghlakelidze G, Sikharulidze I, Tu SL, Morgan CN, Mauldin MR, Parkadze O, Kartskhia N, Turmanidze M, Matheny A, Davidson W, Tang S, Gao J, Li Y, Upton C, et al. Isolation and characterization of Akhmeta virus from wild caught rodents ( spp.) in Georgia. Journal of Virology. PMID 31554682 DOI: 10.1128/Jvi.00966-19 |
0.478 |
|
| 2019 |
Tu SL, Upton C. Bioinformatics for Analysis of Poxvirus Genomes. Methods in Molecular Biology (Clifton, N.J.). 2023: 29-62. PMID 31240669 DOI: 10.1007/978-1-4939-9593-6_2 |
0.344 |
|
| 2018 |
Tu SL, Staheli JP, McClay C, McLeod K, Rose TM, Upton C. Base-By-Base Version 3: New Comparative Tools for Large Virus Genomes. Viruses. 10. PMID 30445717 DOI: 10.3390/V10110637 |
0.489 |
|
| 2018 |
Jacob JM, Subramaniam K, Tu SL, Nielsen O, Tuomi PA, Upton C, Waltzek TB. Complete genome sequence of a novel sea otterpox virus. Virus Genes. PMID 30225673 DOI: 10.1007/S11262-018-1594-8 |
0.564 |
|
| 2018 |
Amgarten D, Upton C. Bioinformatic Approaches for Comparative Analysis of Viruses. Methods in Molecular Biology (Clifton, N.J.). 1704: 401-417. PMID 29277875 DOI: 10.1007/978-1-4939-7463-4_15 |
0.511 |
|
| 2017 |
Bennett M, Tu SL, Upton C, McArtor C, Gillett A, Laird T, O'Dea M. Complete genomic characterisation of two novel poxviruses (WKPV and EKPV) from western and eastern grey kangaroos. Virus Research. PMID 28958947 DOI: 10.1016/J.Virusres.2017.09.016 |
0.53 |
|
| 2017 |
Smithson C, Imbery J, Upton C. Re-Assembly and Analysis of an Ancient Variola Virus Genome. Viruses. 9. PMID 28885569 DOI: 10.3390/V9090253 |
0.535 |
|
| 2017 |
Smithson C, Meyer H, Gigante CM, Gao J, Zhao H, Batra D, Damon I, Upton C, Li Y. Two novel poxviruses with unusual genome rearrangements: NY_014 and Murmansk. Virus Genes. PMID 28762208 DOI: 10.1007/S11262-017-1501-8 |
0.508 |
|
| 2017 |
Tu SL, Nakazawa Y, Gao J, Wilkins K, Gallardo-Romero N, Li Y, Emerson GL, Carroll DS, Upton C. Characterization of Eptesipoxvirus, a novel poxvirus from a microchiropteran bat. Virus Genes. PMID 28685222 DOI: 10.1007/S11262-017-1485-4 |
0.517 |
|
| 2017 |
Amgarten D, Martins LF, Lombardi KC, Antunes LP, de Souza APS, Nicastro GG, Kitajima EW, Quaggio RB, Upton C, Setubal JC, da Silva AM. Three novel Pseudomonas phages isolated from composting provide insights into the evolution and diversity of tailed phages. Bmc Genomics. 18: 346. PMID 28472930 DOI: 10.1186/S12864-017-3729-Z |
0.318 |
|
| 2017 |
Sarker S, Das S, Lavers JL, Hutton I, Helbig K, Imbery J, Upton C, Raidal SR. Genomic characterization of two novel pathogenic avipoxviruses isolated from pacific shearwaters (Ardenna spp.). Bmc Genomics. 18: 298. PMID 28407753 DOI: 10.1186/S12864-017-3680-Z |
0.353 |
|
| 2017 |
Imbery J, Upton C. Organization of the multigene families of African Swine Fever Virus Fine Focus. 3: 155-170. DOI: 10.33043/ff.3.2.155-170 |
0.444 |
|
| 2016 |
Smithson C, Tang N, Sammons S, Frace M, Batra D, Li Y, Emerson GL, Carroll DS, Upton C. The genomes of three North American orthopoxviruses. Virus Genes. PMID 27613417 DOI: 10.1007/S11262-016-1388-9 |
0.515 |
|
| 2016 |
O'Dea MA, Tu SL, Pang S, De Ridder T, Jackson B, Upton C. Genomic characterisation of a novel poxvirus from a flying fox; evidence for a new genus? The Journal of General Virology. PMID 27389615 DOI: 10.1099/Jgv.0.000538 |
0.491 |
|
| 2015 |
Fleischauer C, Upton C, Victoria J, Jones GJ, Roper RL. Genome sequence and comparative virulence of raccoonpox virus: the first North American poxvirus sequence. The Journal of General Virology. 96: 2806-21. PMID 26023150 DOI: 10.1099/Vir.0.000202 |
0.544 |
|
| 2015 |
Bishop RP, Fleischauer C, de Villiers EP, Okoth EA, Arias M, Gallardo C, Upton C. Comparative analysis of the complete genome sequences of Kenyan African swine fever virus isolates within p72 genotypes IX and X. Virus Genes. 50: 303-9. PMID 25645905 DOI: 10.1007/S11262-014-1156-7 |
0.495 |
|
| 2015 |
Portugal R, Coelho J, Höper D, Little NS, Smithson C, Upton C, Martins C, Leitão A, Keil GM. Related strains of African swine fever virus with different virulence: genome comparison and analysis. The Journal of General Virology. 96: 408-19. PMID 25406173 DOI: 10.1099/Vir.0.070508-0 |
0.37 |
|
| 2014 |
Minkley D, Whitney MJ, Lin SH, Barsky MG, Kelly C, Upton C. Suffix tree searcher: exploration of common substrings in large DNA sequence sets. Bmc Research Notes. 7: 466. PMID 25053142 DOI: 10.1186/1756-0500-7-466 |
0.338 |
|
| 2014 |
Smithson C, Purdy A, Verster AJ, Upton C. Prediction of steps in the evolution of variola virus host range. Plos One. 9: e91520. PMID 24626337 DOI: 10.1371/Journal.Pone.0091520 |
0.482 |
|
| 2014 |
Esteban DJ, Upton C, Bartow-McKenney C, Buller R, Chen NG, Schriewer J, Lefkowitz EJ, Wang C. Expression of a non-coding RNA in ectromelia virus is required for normal plaque formation. Virus Genes. 48: 38-47. PMID 24078045 DOI: 10.1007/S11262-013-0983-2 |
0.461 |
|
| 2013 |
Dixon LK, Chapman DA, Netherton CL, Upton C. African swine fever virus replication and genomics. Virus Research. 173: 3-14. PMID 23142553 DOI: 10.1016/J.Virusres.2012.10.020 |
0.54 |
|
| 2012 |
Dunigan DD, Cerny RL, Bauman AT, Roach JC, Lane LC, Agarkova IV, Wulser K, Yanai-Balser GM, Gurnon JR, Vitek JC, Kronschnabel BJ, Jeanniard A, Blanc G, Upton C, Duncan GA, et al. Paramecium bursaria chlorella virus 1 proteome reveals novel architectural and regulatory features of a giant virus. Journal of Virology. 86: 8821-34. PMID 22696644 DOI: 10.1128/Jvi.00907-12 |
0.537 |
|
| 2012 |
Da Silva M, Upton C. Bioinformatics for analysis of poxvirus genomes. Methods in Molecular Biology (Clifton, N.J.). 890: 233-58. PMID 22688771 DOI: 10.1007/978-1-61779-876-4_14 |
0.458 |
|
| 2011 |
Hillary W, Lin SH, Upton C. Base-By-Base version 2: single nucleotide-level analysis of whole viral genome alignments. Microbial Informatics and Experimentation. 1: 2. PMID 22587754 DOI: 10.1186/2042-5783-1-2 |
0.328 |
|
| 2011 |
Ghedin E, Upton C. It's a small world after all-viral genomics and the global dominance of viruses. Current Opinion in Virology. 1: 280-1. PMID 22440784 DOI: 10.1016/J.Coviro.2011.08.001 |
0.441 |
|
| 2011 |
Qin L, Upton C, Hazes B, Evans DH. Genomic analysis of the vaccinia virus strain variants found in Dryvax vaccine. Journal of Virology. 85: 13049-60. PMID 21976639 DOI: 10.1128/Jvi.05779-11 |
0.477 |
|
| 2011 |
Zhao G, Droit L, Tesh RB, Popov VL, Little NS, Upton C, Virgin HW, Wang D. The genome of Yoka poxvirus. Journal of Virology. 85: 10230-8. PMID 21813608 DOI: 10.1128/Jvi.00637-11 |
0.568 |
|
| 2011 |
Chapman DA, Darby AC, Da Silva M, Upton C, Radford AD, Dixon LK. Genomic analysis of highly virulent Georgia 2007/1 isolate of African swine fever virus. Emerging Infectious Diseases. 17: 599-605. PMID 21470447 DOI: 10.3201/Eid1704.101283 |
0.492 |
|
| 2011 |
Coulson D, Upton C. Characterization of indels in poxvirus genomes. Virus Genes. 42: 171-7. PMID 21153876 DOI: 10.1007/S11262-010-0560-X |
0.478 |
|
| 2010 |
Sadeque A, Barsky M, Marass F, Kruczkiewicz P, Upton C. JaPaFi: A Novel Program for the Identification of Highly Conserved DNA Sequences. Viruses. 2: 1867-85. PMID 21994712 DOI: 10.3390/V2091867 |
0.463 |
|
| 2010 |
de Villiers EP, Gallardo C, Arias M, da Silva M, Upton C, Martin R, Bishop RP. Phylogenomic analysis of 11 complete African swine fever virus genome sequences. Virology. 400: 128-36. PMID 20171711 DOI: 10.1016/J.Virol.2010.01.019 |
0.519 |
|
| 2009 |
Alzhanova D, Edwards DM, Hammarlund E, Scholz IG, Horst D, Wagner MJ, Upton C, Wiertz EJ, Slifka MK, Früh K. Cowpox virus inhibits the transporter associated with antigen processing to evade T cell recognition. Cell Host & Microbe. 6: 433-45. PMID 19917498 DOI: 10.1016/J.Chom.2009.09.013 |
0.39 |
|
| 2009 |
Clifford M, Twigg J, Upton C. Evidence for a novel gene associated with human influenza A viruses. Virology Journal. 6: 198. PMID 19917120 DOI: 10.1186/1743-422X-6-198 |
0.517 |
|
| 2009 |
Marass F, Upton C. KISSa: a strategy to build multiple sequence alignments from pairwise comparisons of very closely related sequences. Bmc Research Notes. 2: 91. PMID 19457259 DOI: 10.1186/1756-0500-2-91 |
0.467 |
|
| 2009 |
Da Silva M, Upton C. Vaccinia virus G8R protein: a structural ortholog of proliferating cell nuclear antigen (PCNA). Plos One. 4: e5479. PMID 19421403 DOI: 10.1371/Journal.Pone.0005479 |
0.469 |
|
| 2009 |
Marass F, Upton C. Sequence Searcher: A Java tool to perform regular expression and fuzzy searches of multiple DNA and protein sequences. Bmc Research Notes. 2: 14. PMID 19183477 DOI: 10.1186/1756-0500-2-14 |
0.419 |
|
| 2008 |
Chapman DA, Tcherepanov V, Upton C, Dixon LK. Comparison of the genome sequences of non-pathogenic and pathogenic African swine fever virus isolates. The Journal of General Virology. 89: 397-408. PMID 18198370 DOI: 10.1099/Vir.0.83343-0 |
0.538 |
|
| 2007 |
Osborne JD, Da Silva M, Frace AM, Sammons SA, Olsen-Rasmussen M, Upton C, Buller RM, Chen N, Feng Z, Roper RL, Liu J, Pougatcheva S, Chen W, Wohlhueter RM, Esposito JJ. Genomic differences of Vaccinia virus clones from Dryvax smallpox vaccine: the Dryvax-like ACAM2000 and the mouse neurovirulent Clone-3. Vaccine. 25: 8807-32. PMID 18037545 DOI: 10.1016/J.Vaccine.2007.10.040 |
0.397 |
|
| 2007 |
Esteban DJ, Syed A, Upton C. Organizing and updating whole genome BLAST searches with ReHAB. Methods in Molecular Biology (Clifton, N.J.). 395: 187-94. PMID 17993674 DOI: 10.1007/978-1-59745-514-5_11 |
0.486 |
|
| 2007 |
Summer EJ, Gill JJ, Upton C, Gonzalez CF, Young R. Role of phages in the pathogenesis of Burkholderia, or 'Where are the toxin genes in Burkholderia phages?'. Current Opinion in Microbiology. 10: 410-7. PMID 17719265 DOI: 10.1016/J.Mib.2007.05.016 |
0.347 |
|
| 2007 |
Butler-Cole C, Wagner MJ, Da Silva M, Brown GD, Burke RD, Upton C. An ectromelia virus profilin homolog interacts with cellular tropomyosin and viral A-type inclusion protein. Virology Journal. 4: 76. PMID 17650322 DOI: 10.1186/1743-422X-4-76 |
0.46 |
|
| 2007 |
Thomas JM, Horspool D, Brown G, Tcherepanov V, Upton C. GraphDNA: a Java program for graphical display of DNA composition analyses. Bmc Bioinformatics. 8: 21. PMID 17244370 DOI: 10.1186/1471-2105-8-21 |
0.334 |
|
| 2007 |
Eaton HE, Metcalf J, Penny E, Tcherepanov V, Upton C, Brunetti CR. Comparative genomic analysis of the family Iridoviridae: re-annotating and defining the core set of iridovirus genes. Virology Journal. 4: 11. PMID 17239238 DOI: 10.1186/1743-422X-4-11 |
0.432 |
|
| 2006 |
Tyler SD, Peters GA, Grose C, Severini A, Gray MJ, Upton C, Tipples GA. Genomic cartography of varicella-zoster virus: a complete genome-based analysis of strain variability with implications for attenuation and phenotypic differences. Virology. 359: 447-58. PMID 17069870 DOI: 10.1016/J.Virol.2006.09.037 |
0.453 |
|
| 2006 |
Li G, Chen N, Feng Z, Buller RM, Osborne J, Harms T, Damon I, Upton C, Esteban DJ. Genomic sequence and analysis of a vaccinia virus isolate from a patient with a smallpox vaccine-related complication. Virology Journal. 3: 88. PMID 17062162 DOI: 10.1186/1743-422X-3-88 |
0.436 |
|
| 2006 |
Syed A, Upton C. Java GUI for InterProScan (JIPS): a tool to help process multiple InterProScans and perform ortholog analysis. Bmc Bioinformatics. 7: 462. PMID 17054794 DOI: 10.1186/1471-2105-7-462 |
0.411 |
|
| 2006 |
Da Silva M, Shen L, Tcherepanov V, Watson C, Upton C. Predicted function of the vaccinia virus G5R protein. Bioinformatics (Oxford, England). 22: 2846-50. PMID 17021162 DOI: 10.1093/Bioinformatics/Btl506 |
0.432 |
|
| 2006 |
Peters GA, Tyler SD, Grose C, Severini A, Gray MJ, Upton C, Tipples GA. A full-genome phylogenetic analysis of varicella-zoster virus reveals a novel origin of replication-based genotyping scheme and evidence of recombination between major circulating clades. Journal of Virology. 80: 9850-60. PMID 16973589 DOI: 10.1128/Jvi.00715-06 |
0.513 |
|
| 2006 |
Tcherepanov V, Ehlers A, Upton C. Genome Annotation Transfer Utility (GATU): rapid annotation of viral genomes using a closely related reference genome. Bmc Genomics. 7: 150. PMID 16772042 DOI: 10.1186/1471-2164-7-150 |
0.483 |
|
| 2006 |
Lefkowitz EJ, Wang C, Upton C. Poxviruses: past, present and future. Virus Research. 117: 105-18. PMID 16503070 DOI: 10.1016/J.Virusres.2006.01.016 |
0.427 |
|
| 2006 |
Li G, Chen N, Roper RL, Feng Z, Hunter A, Danila M, Lefkowitz EJ, Buller RML, Upton C. Complete coding sequences of the rabbitpox virus genome. The Journal of General Virology. 86: 2969-2977. PMID 16227218 DOI: 10.1099/Vir.0.81331-0 |
0.575 |
|
| 2005 |
Chen N, Li G, Liszewski MK, Atkinson JP, Jahrling PB, Feng Z, Schriewer J, Buck C, Wang C, Lefkowitz EJ, Esposito JJ, Harms T, Damon IK, Roper RL, Upton C, et al. Virulence differences between monkeypox virus isolates from West Africa and the Congo basin. Virology. 340: 46-63. PMID 16023693 DOI: 10.1016/J.Virol.2005.05.030 |
0.452 |
|
| 2005 |
Esteban DJ, Da Silva M, Upton C. New bioinformatics tools for viral genome analyses at Viral Bioinformatics--Canada. Pharmacogenomics. 6: 271-80. PMID 16013958 DOI: 10.1517/14622416.6.3.271 |
0.528 |
|
| 2005 |
Da Silva M, Upton C. Host-derived pathogenicity islands in poxviruses. Virology Journal. 2: 30. PMID 15823205 DOI: 10.1186/1743-422X-2-30 |
0.456 |
|
| 2005 |
James D, Upton C. Genome segment RNA-1 of a flat apple isolate of Cherry rasp leaf virus: Nucleotide sequence analysis and RT-PCR detection Archives of Virology. 150: 1469-1476. PMID 15789268 DOI: 10.1007/S00705-005-0503-3 |
0.392 |
|
| 2005 |
Da Silva M, Upton C. Using purine skews to predict genes in AT-rich poxviruses. Bmc Genomics. 6: 22. PMID 15720717 DOI: 10.1186/1471-2164-6-22 |
0.334 |
|
| 2005 |
Whitney J, Esteban DJ, Upton C. Recent Hits Acquired by BLAST (ReHAB): a tool to identify new hits in sequence similarity searches. Bmc Bioinformatics. 6: 23. PMID 15701178 DOI: 10.1186/1471-2105-6-23 |
0.413 |
|
| 2005 |
Lefkowitz EJ, Upton C, Changayil SS, Buck C, Traktman P, Buller RM. Poxvirus Bioinformatics Resource Center: a comprehensive Poxviridae informational and analytical resource. Nucleic Acids Research. 33: D311-6. PMID 15608205 DOI: 10.1093/Nar/Gki110 |
0.495 |
|
| 2004 |
Brodie R, Smith AJ, Roper RL, Tcherepanov V, Upton C. Base-By-Base: single nucleotide-level analysis of whole viral genome alignments. Bmc Bioinformatics. 5: 96. PMID 15253776 DOI: 10.1186/1471-2105-5-96 |
0.526 |
|
| 2004 |
Upton C. Poxvirus bioinformatics. Methods in Molecular Biology (Clifton, N.J.). 269: 347-70. PMID 15114025 DOI: 10.1385/1-59259-789-0:347 |
0.322 |
|
| 2004 |
Brodie R, Roper RL, Upton C. JDotter: a Java interface to multiple dotplots generated by dotter. Bioinformatics (Oxford, England). 20: 279-81. PMID 14734323 DOI: 10.1093/Bioinformatics/Btg406 |
0.368 |
|
| 2003 |
Chen N, Danila MI, Feng Z, Buller RM, Wang C, Han X, Lefkowitz EJ, Upton C. The genomic sequence of ectromelia virus, the causative agent of mousepox. Virology. 317: 165-86. PMID 14675635 DOI: 10.1016/S0042-6822(03)00520-8 |
0.556 |
|
| 2003 |
Upton C, Slack S, Hunter AL, Ehlers A, Roper RL. Poxvirus orthologous clusters: toward defining the minimum essential poxvirus genome. Journal of Virology. 77: 7590-600. PMID 12805459 DOI: 10.1128/Jvi.77.13.7590-7600.2003 |
0.501 |
|
| 2003 |
Marra MA, Jones SJ, Astell CR, Holt RA, Brooks-Wilson A, Butterfield YS, Khattra J, Asano JK, Barber SA, Chan SY, Cloutier A, Coughlin SM, Freeman D, Girn N, Griffith OL, ... ... Upton C, et al. The Genome sequence of the SARS-associated coronavirus. Science (New York, N.Y.). 300: 1399-404. PMID 12730501 DOI: 10.1126/Science.1085953 |
0.532 |
|
| 2002 |
Ehlers A, Osborne J, Slack S, Roper RL, Upton C. Poxvirus Orthologous Clusters (POCs). Bioinformatics (Oxford, England). 18: 1544-5. PMID 12424130 DOI: 10.1093/Bioinformatics/18.11.1544 |
0.425 |
|
| 2002 |
James D, Upton C. Nucleotide sequence analysis of RNA-2 of a flat apple isolate of Cherry rasp leaf virus with regions showing greater identity to animal picornaviruses than to related plant viruses Archives of Virology. 147: 1631-1641. PMID 12181681 DOI: 10.1007/S00705-002-0833-3 |
0.496 |
|
| 2001 |
James D, Upton C. Detection and differentiation of cherry mottle leaf virus and peach mosaic virus Acta Horticulturae. 550: 185-189. |
0.381 |
|
| 2000 |
Upton C, Hogg D, Perrin D, Boone M, Harris NL. Viral genome organizer: a system for analyzing complete viral genomes. Virus Research. 70: 55-64. PMID 11074125 DOI: 10.1016/S0168-1702(00)00210-0 |
0.5 |
|
| 2000 |
James D, Jelkmann W, Upton C. Nucleotide sequence and genome organisation of cherry mottle leaf virus and its relationship to members of the Trichovirus genus Archives of Virology. 145: 995-1007. PMID 10881685 DOI: 10.1007/S007050050690 |
0.573 |
|
| 2000 |
Upton C. Screening predicted coding regions in poxvirus genomes Virus Genes. 20: 159-164. PMID 10872878 DOI: 10.1023/A:1008126816295 |
0.451 |
|
| 2000 |
Hiscock D, Upton C. Viral genome database: Storing and analyzing genes and proteins from complete viral genomes Bioinformatics. 16: 484-485. PMID 10871272 DOI: 10.1093/Bioinformatics/16.5.484 |
0.519 |
|
| 2000 |
Chen N, Buller RM, Wall EM, Upton C. Analysis of host response modifier ORFs of ectromelia virus, the causative agent of mousepox. Virus Research. 66: 155-73. PMID 10725549 DOI: 10.1016/S0168-1702(99)00135-5 |
0.491 |
|
| 2000 |
Brick DJ, Burke RD, Minkley AA, Upton C. Ectromelia virus virulence factor p28 acts upstream of caspase-3 in response to UV light-induced apoptosis. The Journal of General Virology. 81: 1087-97. PMID 10725436 DOI: 10.1099/0022-1317-81-4-1087 |
0.691 |
|
| 1999 |
James D, Jelkmann W, Upton C. Specific Detection of Cherry Mottle Leaf Virus Using Digoxigenin-Labeled cDNA Probes and RT-PCR. Plant Disease. 83: 235-239. PMID 30845500 DOI: 10.1094/Pdis.1999.83.3.235 |
0.516 |
|
| 1999 |
James D, Upton C. Single primer pair designs that facilitate simultaneous detection and differentiation of peach mosaic virus and cherry mottle leaf virus Journal of Virological Methods. 83: 103-111. PMID 10598088 DOI: 10.1016/S0166-0934(99)00112-3 |
0.458 |
|
| 1999 |
Wall EM, Cao JX, Upton C. Subversion of cytokine networks by viruses. International Reviews of Immunology. 17: 121-55. PMID 9914946 DOI: 10.3109/08830189809084490 |
0.35 |
|
| 1998 |
Brick DJ, Burke RD, Schiff L, Upton C. Shope fibroma virus RING finger protein N1R binds DNA and inhibits apoptosis. Virology. 249: 42-51. PMID 9740775 DOI: 10.1006/Viro.1998.9304 |
0.709 |
|
| 1998 |
Wall EM, Cao J, Chen N, Buller RM, Upton C. A novel poxvirus gene and its human homolog are similar to an E. coli lysophospholipase. Virus Research. 52: 157-67. PMID 9495531 DOI: 10.1016/S0168-1702(97)00122-6 |
0.505 |
|
| 1997 |
Cao JX, Koop BF, Upton C. A human homolog of the vaccinia virus HindIII K4L gene is a member of the phospholipase D superfamily. Virus Research. 48: 11-8. PMID 9140189 DOI: 10.1016/S0168-1702(96)01422-0 |
0.459 |
|
| 1996 |
Cattell K, Koop B, Olafson RS, Fellows M, Bailey I, Olafson RW, Upton C. Approaches to detection of distantly related proteins by database searches Biotechniques. 21: 1118-1125. PMID 8969842 DOI: 10.2144/96216Bc03 |
0.382 |
|
| 1995 |
Brick DJ, Brumlik MJ, Buckley JT, Cao JX, Davies PC, Misra S, Tranbarger TJ, Upton C. A new family of lipolytic plant enzymes with members in rice, arabidopsis and maize. Febs Letters. 377: 475-80. PMID 8549779 DOI: 10.1016/0014-5793(95)01405-5 |
0.698 |
|
| 1995 |
Mossman K, Upton C, McFadden G. The myxoma virus-soluble interferon-γ receptor homolog, M-T7, inhibits interferon-γ in a species-specific manner Journal of Biological Chemistry. 270: 3031-3038. PMID 7852384 DOI: 10.1074/Jbc.270.7.3031 |
0.332 |
|
| 1995 |
Mossman K, Ostergaard H, Upton C, McFadden G. Myxoma virus and shope fibroma virus encode dual-specificity tyrosine/serine phosphatases which are essential for virus viability Virology. 206: 572-582. PMID 7831813 DOI: 10.1016/S0042-6822(95)80074-3 |
0.535 |
|
| 1995 |
Mossman K, Upton C, Buller RM, McFadden G. Species specificity of ectromelia virus and vaccinia virus interferon-gamma binding proteins. Virology. 208: 762-9. PMID 7747448 DOI: 10.1006/Viro.1995.1208 |
0.444 |
|
| 1994 |
Upton C, Schiff L, Rice SA, Dowdeswell T, Yang X, McFadden G. A poxvirus protein with a RING finger motif binds zinc and localizes in virus factories. Journal of Virology. 68: 4186-4195. DOI: 10.1128/Jvi.68.7.4186-4195.1994 |
0.533 |
|
| 1993 |
Stuart DT, Upton C, Higman MA, Niles EG, Mcfadden G. A poxvirus-encoded uracil DNA glycosylase is essential for virus viability Journal of Virology. 67: 2503-2512. PMID 8474156 DOI: 10.1128/Jvi.67.5.2503-2512.1993 |
0.467 |
|
| 1993 |
Upton C, Stuart DT, Mcfadden G. Identification of a poxvirus gene encoding a uracil DNA glycosylase Proceedings of the National Academy of Sciences of the United States of America. 90: 4518-4522. PMID 8389453 DOI: 10.1073/Pnas.90.10.4518 |
0.449 |
|
| 1993 |
Macen JL, Upton C, Nation N, McFadden G. SERP1, a serine proteinase inhibitor encoded by myxoma virus, is a secreted glycoprotein that interferes with inflammation. Virology. 195: 348-63. PMID 8337817 DOI: 10.1006/Viro.1993.1385 |
0.504 |
|
| 1993 |
Stuart DT, Upton C, Higman MA, Niles EG, McFadden G. A poxvirus-encoded uracil DNA glycosylase is essential for virus viability. Journal of Virology. 67: 2503-2512. DOI: 10.1128/jvi.67.5.2503-2512.1993 |
0.314 |
|
| 1992 |
Upton C, Mossman K, McFadden G. Encoding of a homolog of the IFN-γ receptor by myxoma virus Science. 258: 1369-1372. PMID 1455233 DOI: 10.1126/Science.1455233 |
0.417 |
|
| 1992 |
Graham KA, Opgenorth A, Upton C, McFadden G. Myxoma virus M11L ORF encodes a protein for which cell surface localization is critical in manifestation of viral virulence Virology. 191: 112-124. PMID 1413498 DOI: 10.1016/0042-6822(92)90172-L |
0.447 |
|
| 1992 |
Opgenorth A, Strayer D, Upton C, McFadden G. Deletion of the growth factor gene related to EGF and TGFα reduces virulence of malignant rabbit fibroma virus Virology. 186: 175-191. PMID 1309274 DOI: 10.1016/0042-6822(92)90072-W |
0.393 |
|
| 1991 |
Smith CA, Davis T, Wignall JM, Din WS, Farrah T, Upton C, McFadden G, Goodwin RG. T2 open reading frame from the Shope fibroma virus encodes a soluble form of the TNF receptor. Biochemical and Biophysical Research Communications. 176: 335-42. PMID 1850261 DOI: 10.1016/0006-291X(91)90929-2 |
0.374 |
|
| 1991 |
Upton C, Macen JL, Schreiber M, McFadden G. Myxoma virus expresses a secreted protein with homology to the tumor necrosis factor receptor gene family that contributes to viral virulence. Virology. 184: 370-82. PMID 1651597 DOI: 10.1016/0042-6822(91)90853-4 |
0.494 |
|
| 1991 |
Upton C, Stuart D, McFadden G. Identification and DNA sequence of the large subunit of the capping enzyme from Shope fibroma virus Virology. 183: 773-777. PMID 1649507 DOI: 10.1016/0042-6822(91)91009-6 |
0.529 |
|
| 1990 |
Upton C, Macen JL, Wishart DS, McFadden G. Myxoma virus and malignant rabbit fibroma virus encode a serpin-like protein important for virus virulence. Virology. 179: 618-31. PMID 2173255 DOI: 10.1016/0042-6822(90)90129-F |
0.58 |
|
| 1990 |
Upton C, Opgenorth A, Traktman P, McFadden G. Identification and DNA sequence of the Shope fibroma virus DNA topoisomerase gene. Virology. 176: 439-47. PMID 2161144 DOI: 10.1016/0042-6822(90)90013-H |
0.531 |
|
| 1989 |
Lobe CG, Shaw J, Fregeau C, Duggan B, Meier M, Brewer A, Upton C, Mcfadden G, Patient RK, Paetkau V, Bleackley RC. Transcriptional regulation of two cytotoxk T lymphocyte-specific serine protease gene Nucleic Acids Research. 17: 5765-5779. PMID 2788268 DOI: 10.1093/Nar/17.14.5765 |
0.376 |
|
| 1988 |
Henning WD, Upton C, McFadden G, Majumdar R, Bridger WA. Cloning and sequencing of the cytoplasmic precursor to the alpha subunit of rat liver mitochondrial succinyl-CoA synthetase. Proceedings of the National Academy of Sciences of the United States of America. 85: 1432-6. PMID 3422742 DOI: 10.1073/Pnas.85.5.1432 |
0.34 |
|
| 1988 |
Upton C, Macen JL, Maranchuk RA, DeLange AM, McFadden G. Tumorigenic poxviruses: fine analysis of the recombination junctions in malignant rabbit fibroma virus, a recombinant between Shope fibroma virus and myxoma virus. Virology. 166: 229-39. PMID 2842947 DOI: 10.1016/0042-6822(88)90164-X |
0.429 |
|
| 1987 |
Chang W, Upton C, Hu SL, Purchio AF, McFadden G. The genome of Shope fibroma virus, a tumorigenic poxvirus, contains a growth factor gene with sequence similarity to those encoding epidermal growth factor and transforming growth factor alpha. Molecular and Cellular Biology. 7: 535-40. PMID 3031480 DOI: 10.1128/Mcb.7.1.535 |
0.352 |
|
| 1987 |
Upton C, Macen JL, McFadden G. Mapping and sequencing of a gene from myxoma virus that is related to those encoding epidermal growth factor and transforming growth factor alpha Journal of Virology. 61: 1271-1275. PMID 3029424 DOI: 10.1128/Jvi.61.4.1271-1275.1987 |
0.473 |
|
| 1987 |
Macaulay C, Upton C, McFadden G. Tumorigenic poxviruses: Transcriptional mapping of the terminal inverted repeats of shope fibroma virus Virology. 158: 381-393. PMID 2884778 DOI: 10.1016/0042-6822(87)90210-8 |
0.448 |
|
| 1987 |
Upton C, DeLange AM, McFadden G. Tumorigenic poxviruses: Genomic organization and dna sequence of the telomeric region of the shope fibroma virus genome Virology. 160: 20-30. PMID 2820128 DOI: 10.1016/0042-6822(87)90039-0 |
0.5 |
|
| 1986 |
Upton C, McFadden G. DNA sequence homology between the terminal inverted repeats of Shope fibroma virus and an endogenous cellular plasmid species Molecular and Cellular Biology. 6: 265-276. PMID 3023828 DOI: 10.1128/Mcb.6.1.265 |
0.473 |
|
| 1986 |
Upton C, McFadden G. Identification and nucleotide sequence of the thymidine kinase gene of Shope fibroma virus Journal of Virology. 60: 920-927. PMID 3023681 DOI: 10.1128/Jvi.60.3.920-927.1986 |
0.507 |
|
| 1986 |
Upton C, Carrell RW, McFadden G. A novel member of the serpin superfamily is encoded on a circular plasmid-like DNA species isolated from rabbit cells Febs Letters. 207: 115-120. PMID 3021526 DOI: 10.1016/0014-5793(86)80023-0 |
0.479 |
|
| 1986 |
Upton C, McFadden G. Tumorigenic poxviruses: Analysis of viral DNA sequences implicated in the tumorigenicity of shope fibroma virus and malignant rabbit virus Virology. 152: 308-321. PMID 3014722 DOI: 10.1016/0042-6822(86)90134-0 |
0.561 |
|
| 1986 |
DeLange AM, Reddy M, Scraba D, Upton C, McFadden G. Replication and resolution of cloned poxvirus telomeres in vivo generates linear minichromosomes with intact viral hairpin termini. Journal of Virology. 59: 249-259. DOI: 10.1128/Jvi.59.2.249-259.1986 |
0.479 |
|
| 1985 |
Block W, Upton C, McFadden G. Tumorigenic poxviruses: genomic organization of malignant rabbit virus, a recombinant between shope fibroma virus and myxoma virus Virology. 140: 113-124. PMID 2981446 DOI: 10.1016/0042-6822(85)90450-7 |
0.55 |
|
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