Isabel Gordo - Publications

Affiliations: 
Instituto Gulbenkian de Ciencia, Oeiras, Lisboa, Portugal 
Area:
Microbial Experimental Evolution and Population Genetics

62 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Balbontín R, Frazão N, Gordo I. DNA breaks-mediated fitness cost reveals RNase HI as a new target for selectively eliminating antibiotic resistant bacteria. Molecular Biology and Evolution. PMID 33830249 DOI: 10.1093/molbev/msab093  0.36
2020 Barreto HC, Cordeiro TN, Henriques AO, Gordo I. Rampant loss of social traits during domestication of a Bacillus subtilis natural isolate. Scientific Reports. 10: 18886. PMID 33144634 DOI: 10.1038/s41598-020-76017-1  0.36
2020 Barreto HC, Frazão N, Sousa A, Konrad A, Gordo I. Mutation accumulation and horizontal gene transfer in colonizing the gut of old mice. Communicative & Integrative Biology. 13: 89-96. PMID 33014261 DOI: 10.1080/19420889.2020.1783059  0.56
2020 Barreto HC, Sousa A, Gordo I. The Landscape of Adaptive Evolution of a Gut Commensal Bacteria in Aging Mice. Current Biology : Cb. PMID 32142696 DOI: 10.1016/J.Cub.2020.01.037  0.56
2019 Frazão N, Sousa A, Lässig M, Gordo I. Horizontal gene transfer overrides mutation in colonizing the mammalian gut. Proceedings of the National Academy of Sciences of the United States of America. PMID 31431529 DOI: 10.1073/Pnas.1906958116  0.56
2017 Sousa A, Ramiro RS, Barroso-Batista J, Güleresi D, Lourenço M, Gordo I. Recurrent Reverse Evolution Maintains Polymorphism after Strong Bottlenecks in Commensal Gut Bacteria. Molecular Biology and Evolution. 34: 2879-2892. PMID 28961745 DOI: 10.1093/Molbev/Msx221  0.56
2017 Sousa A, Frazão N, Ramiro RS, Gordo I. Evolution of commensal bacteria in the intestinal tract of mice. Current Opinion in Microbiology. 38: 114-121. PMID 28591676 DOI: 10.1016/J.Mib.2017.05.007  0.56
2016 Lourenço M, Ramiro RS, Güleresi D, Barroso-Batista J, Xavier KB, Gordo I, Sousa A. A Mutational Hotspot and Strong Selection Contribute to the Order of Mutations Selected for during Escherichia coli Adaptation to the Gut. Plos Genetics. 12: e1006420. PMID 27812114 DOI: 10.1371/Journal.Pgen.1006420  0.56
2016 Azevedo M, Sousa A, Moura de Sousa J, Thompson JA, Proença JT, Gordo I. Trade-Offs of Escherichia coli Adaptation to an Intracellular Lifestyle in Macrophages. Plos One. 11: e0146123. PMID 26752723 DOI: 10.1371/Journal.Pone.0146123  0.56
2016 Azevedo M, Sousa A, De Sousa JM, Thompson JA, Proença JT, Gordo I. Trade-offs of Escherichia coli adaptation to an intracellular lifestyle in macrophages Plos One. 11. DOI: 10.1371/journal.pone.0146123  1
2015 Barroso-Batista J, Demengeot J, Gordo I. Adaptive immunity increases the pace and predictability of evolutionary change in commensal gut bacteria. Nature Communications. 6: 8945. PMID 26615893 DOI: 10.1038/Ncomms9945  1
2015 Moura de Sousa J, Sousa A, Bourgard C, Gordo I. Potential for adaptation overrides cost of resistance. Future Microbiology. 10: 1415-31. PMID 26343510 DOI: 10.2217/Fmb.15.61  1
2015 Durão P, Trindade S, Sousa A, Gordo I. Multiple Resistance at No Cost: Rifampicin and Streptomycin a Dangerous Liaison in the Spread of Antibiotic Resistance. Molecular Biology and Evolution. 32: 2675-80. PMID 26130082 DOI: 10.1093/Molbev/Msv143  0.44
2014 Gordo I, Demengeot J, Xavier K. Escherichia coli adaptation to the gut environment: a constant fight for survival. Future Microbiology. 9: 1235-8. PMID 25437184 DOI: 10.2217/Fmb.14.86  1
2014 Barroso-Batista J, Sousa A, Lourenço M, Bergman ML, Sobral D, Demengeot J, Xavier KB, Gordo I. The first steps of adaptation of Escherichia coli to the gut are dominated by soft sweeps. Plos Genetics. 10: e1004182. PMID 24603313 DOI: 10.1371/Journal.Pgen.1004182  1
2014 Perfeito L, Sousa A, Bataillon T, Gordo I. Rates of fitness decline and rebound suggest pervasive epistasis. Evolution; International Journal of Organic Evolution. 68: 150-62. PMID 24372601 DOI: 10.1111/Evo.12234  0.44
2013 Miskinyte M, Sousa A, Ramiro RS, de Sousa JA, Kotlinowski J, Caramalho I, Magalhães S, Soares MP, Gordo I. The genetic basis of Escherichia coli pathoadaptation to macrophages. Plos Pathogens. 9: e1003802. PMID 24348252 DOI: 10.1371/Journal.Ppat.1003802  1
2013 Sousa A, Bourgard C, Wahl LM, Gordo I. Rates of transposition in Escherichia coli. Biology Letters. 9: 20130838. PMID 24307531 DOI: 10.1098/Rsbl.2013.0838  0.44
2013 Chelo IM, Nédli J, Gordo I, Teotónio H. An experimental test on the probability of extinction of new genetic variants. Nature Communications. 4: 2417. PMID 24030070 DOI: 10.1038/Ncomms3417  1
2013 Avelar AT, Perfeito L, Gordo I, Ferreira MG. Genome architecture is a selectable trait that can be maintained by antagonistic pleiotropy. Nature Communications. 4: 2235. PMID 23974178 DOI: 10.1038/Ncomms3235  1
2013 Moura de Sousa JA, Campos PR, Gordo I. An ABC method for estimating the rate and distribution of effects of beneficial mutations. Genome Biology and Evolution. 5: 794-806. PMID 23542207 DOI: 10.1093/Gbe/Evt045  1
2013 Brito PH, Rocha EP, Xavier KB, Gordo I. Natural genome diversity of AI-2 quorum sensing in Escherichia coli: conserved signal production but labile signal reception. Genome Biology and Evolution. 5: 16-30. PMID 23246794 DOI: 10.1093/Gbe/Evs122  1
2013 Miskinyte M, Gordo I. Increased survival of antibiotic-resistant Escherichia coli inside macrophages. Antimicrobial Agents and Chemotherapy. 57: 189-95. PMID 23089747 DOI: 10.1128/Aac.01632-12  1
2013 Gordo I, Campos PR. Evolution of clonal populations approaching a fitness peak. Biology Letters. 9: 20120239. PMID 22764110 DOI: 10.1098/Rsbl.2012.0239  1
2012 Trindade S, Sousa A, Gordo I. Antibiotic resistance and stress in the light of Fisher's model. Evolution; International Journal of Organic Evolution. 66: 3815-24. PMID 23206139 DOI: 10.1111/J.1558-5646.2012.01722.X  1
2012 Sousa A, Magalhães S, Gordo I. Cost of antibiotic resistance and the geometry of adaptation. Molecular Biology and Evolution. 29: 1417-28. PMID 22144641 DOI: 10.1093/Molbev/Msr302  1
2011 Gordo I, Perfeito L, Sousa A. Fitness effects of mutations in bacteria. Journal of Molecular Microbiology and Biotechnology. 21: 20-35. PMID 22248540 DOI: 10.1159/000332747  1
2011 Silva RF, Mendonça SC, Carvalho LM, Reis AM, Gordo I, Trindade S, Dionisio F. Pervasive sign epistasis between conjugative plasmids and drug-resistance chromosomal mutations. Plos Genetics. 7: e1002181. PMID 21829372 DOI: 10.1371/Journal.Pgen.1002181  1
2010 Brito PH, Guilherme E, Soares H, Gordo I. Mutation accumulation in Tetrahymena. Bmc Evolutionary Biology. 10: 354. PMID 21078144 DOI: 10.1186/1471-2148-10-354  1
2010 Marais GA, Campos PR, Gordo I. Can intra-Y gene conversion oppose the degeneration of the human Y chromosome? A simulation study. Genome Biology and Evolution. 2: 347-57. PMID 20624739 DOI: 10.1093/Gbe/Evq026  1
2010 Trindade S, Perfeito L, Gordo I. Rate and effects of spontaneous mutations that affect fitness in mutator Escherichia coli. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 365: 1177-86. PMID 20308092 DOI: 10.1098/Rstb.2009.0287  1
2010 Viana DS, Gordo I, Sucena E, Moita MA. Cognitive and motivational requirements for the emergence of cooperation in a rat social game. Plos One. 5: e8483. PMID 20084113 DOI: 10.1371/Journal.Pone.0008483  1
2009 Charlesworth B, Betancourt AJ, Kaiser VB, Gordo I. Genetic recombination and molecular evolution. Cold Spring Harbor Symposia On Quantitative Biology. 74: 177-86. PMID 19734202 DOI: 10.1101/Sqb.2009.74.015  1
2009 Trindade S, Sousa A, Xavier KB, Dionisio F, Ferreira MG, Gordo I. Positive epistasis drives the acquisition of multidrug resistance. Plos Genetics. 5: e1000578. PMID 19629166 DOI: 10.1371/Journal.Pgen.1000578  1
2009 Gordo I, Gomes MG, Reis DG, Campos PR. Genetic diversity in the SIR model of pathogen evolution. Plos One. 4: e4876. PMID 19287490 DOI: 10.1371/Journal.Pone.0004876  1
2008 Gordo I, Campos PR. Sex and deleterious mutations. Genetics. 179: 621-6. PMID 18493076 DOI: 10.1534/Genetics.108.086637  1
2008 Campos PR, Neto PS, de Oliveira VM, Gordo I. Environmental heterogeneity enhances clonal interference. Evolution; International Journal of Organic Evolution. 62: 1390-9. PMID 18363863 DOI: 10.1111/J.1558-5646.2008.00380.X  1
2008 Perfeito L, Pereira MI, Campos PR, Gordo I. The effect of spatial structure on adaptation in Escherichia coli. Biology Letters. 4: 57-9. PMID 18029298 DOI: 10.1098/Rsbl.2007.0481  1
2007 Perfeito L, Fernandes L, Mota C, Gordo I. Adaptive mutations in bacteria: high rate and small effects. Science (New York, N.Y.). 317: 813-5. PMID 17690297 DOI: 10.1126/Science.1142284  1
2007 Gordo I, Campos PR. Patterns of genetic variation in populations of infectious agents. Bmc Evolutionary Biology. 7: 116. PMID 17629913 DOI: 10.1186/1471-2148-7-116  1
2007 Combadão J, Campos PR, Dionisio F, Gordo I. Small-world networks decrease the speed of Muller's ratchet. Genetical Research. 89: 7-18. PMID 17517155 DOI: 10.1017/S0016672307008658  1
2007 Gökaydin D, Oliveira-Martins JB, Gordo I, Gomes MG. The reinfection threshold regulates pathogen diversity: the case of influenza. Journal of the Royal Society, Interface / the Royal Society. 4: 137-42. PMID 17015285 DOI: 10.1098/Rsif.2006.0159  1
2007 Dionisio F, Gordo I. Controlling excludability in the evolution of cooperation Evolutionary Ecology Research. 9: 365-373.  1
2006 Campos PR, Combadão J, Dionisio F, Gordo I. Muller's ratchet in random graphs and scale-free networks. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 74: 042901. PMID 17155115 DOI: 10.1103/Physreve.74.042901  1
2006 Gordo I, Campos PR. Adaptive evolution in a spatially structured asexual population. Genetica. 127: 217-29. PMID 16850226 DOI: 10.1007/S10709-005-4012-9  1
2006 Perfeito L, Gordo I, Campos PRA. The effect of spatial structure in adaptive evolution European Physical Journal B. 51: 301-306. DOI: 10.1140/Epjb/E2006-00222-X  1
2006 Perfeito L, Gordo I, Campos PRA. The effect of spatial structure in adaptive evolution European Physical Journal B. 51: 301-306. DOI: 10.1140/epjb/e2006-00222-x  0.72
2006 Campos PRA, Combadão J, Dionisio F, Gordo I. Mullera's ratchet in random graphs and scale-free networks Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 74. DOI: 10.1103/PhysRevE.74.042901  1
2006 Campos PRA, Combadão J, Dionisio F, Gordo I. Mullera's ratchet in random graphs and scale-free networks Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 74. DOI: 10.1103/PhysRevE.74.042901  0.72
2006 Campos PRA, Gordo I. Pathogen genetic variation in small-world host contact structures Journal of Statistical Mechanics: Theory and Experiment. DOI: 10.1088/1742-5468/2006/12/L12003  1
2006 Campos PRA, Gordo I. Pathogen genetic variation in small-world host contact structures Journal of Statistical Mechanics: Theory and Experiment. DOI: 10.1088/1742-5468/2006/12/L12003  0.72
2006 Faro J, Combadao J, Gordo I. Did germinal centers evolve under differential effects of Diversity vs Affinity? Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 4163: 1-8.  1
2006 Dionisio F, Gordo I. The tragedy of the commons, the public goods dilemma, and the meaning of rivalry and excludability in evolutionary biology Evolutionary Ecology Research. 8: 321-332.  1
2005 Dionisio F, Conceição IC, Marques AC, Fernandes L, Gordo I. The evolution of a conjugative plasmid and its ability to increase bacterial fitness. Biology Letters. 1: 250-2. PMID 17148179 DOI: 10.1098/Rsbl.2004.0275  1
2005 Rosas A, Gordo I, Campos PR. Scaling, genetic drift, and clonal interference in the extinction pattern of asexual population. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 72: 012901. PMID 16090018 DOI: 10.1103/Physreve.72.012901  1
2005 Gordo I, Dionisio F. Nonequilibrium model for estimating parameters of deleterious mutations. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 71: 031907. PMID 15903459 DOI: 10.1103/Physreve.71.031907  1
2004 Bachtrog D, Gordo I. Adaptive evolution of asexual populations under Muller's ratchet. Evolution; International Journal of Organic Evolution. 58: 1403-13. PMID 15341144 DOI: 10.1111/J.0014-3820.2004.Tb01722.X  1
2002 Gordo I, Navarro A, Charlesworth B. Muller's ratchet and the pattern of variation at a neutral locus. Genetics. 161: 835-48. PMID 12072478  1
2001 Gordo I, Charlesworth B. The speed of Muller's ratchet with background selection, and the degeneration of Y chromosomes. Genetical Research. 78: 149-61. PMID 11732092 DOI: 10.1017/S0016672301005213  1
2001 Gordo I, Charlesworth B. Genetic linkage and molecular evolution. Current Biology : Cb. 11: R684-6. PMID 11553339 DOI: 10.1016/S0960-9822(01)00408-0  1
2000 Gordo I, Charlesworth B. On the speed of Muller's ratchet. Genetics. 156: 2137-40. PMID 11187462  1
2000 Gordo I, Charlesworth B. The degeneration of asexual haploid populations and the speed of Muller's ratchet. Genetics. 154: 1379-87. PMID 10757777  1
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