Patrick Abbot, Ph.D. - Publications

Biological Sciences Vanderbilt University, Nashville, TN 
Evolution of sociality, species interactions

50 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Mandel JR, Ramsey AJ, Holley JM, Scott VA, Mody D, Abbot P. Disentangling complex inheritance patterns of plant organellar genomes: an example from carrot. The Journal of Heredity. PMID 32886780 DOI: 10.1093/Jhered/Esaa037  0.419
2020 LaBella AL, Abraham A, Pichkar Y, Fong SL, Zhang G, Muglia LJ, Abbot P, Rokas A, Capra JA. Accounting for diverse evolutionary forces reveals mosaic patterns of selection on human preterm birth loci. Nature Communications. 11: 3731. PMID 32709900 DOI: 10.1038/S41467-020-17258-6  0.37
2019 Birnbaum SSL, Abbot P. Gene Expression and Diet Breadth in Plant-Feeding Insects: Summarizing Trends. Trends in Ecology & Evolution. PMID 31791830 DOI: 10.1016/J.Tree.2019.10.014  0.469
2019 Gloss AD, Abbot P, Whiteman NK. How interactions with plant chemicals shape insect genomes. Current Opinion in Insect Science. 36: 149-156. PMID 31698152 DOI: 10.1016/J.Cois.2019.09.005  0.428
2019 Moon JM, Capra JA, Abbot P, Rokas A. Immune Regulation in Eutherian Pregnancy: Live Birth Coevolved with Novel Immune Genes and Gene Regulation. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. e1900072. PMID 31373044 DOI: 10.1002/Bies.201900072  0.327
2019 Smith SP, Phillips JB, Johnson ML, Abbot P, Capra JA, Rokas A. Genome-wide association analysis uncovers variants for reproductive variation across dog breeds and links to domestication. Evolution, Medicine, and Public Health. 2019: 93-103. PMID 31263560 DOI: 10.1093/Emph/Eoz015  0.346
2019 Moon JM, Capra JA, Abbot P, Rokas A. Signatures of Recent Positive Selection in Enhancers Across 41 Human Tissues. G3 (Bethesda, Md.). PMID 31213516 DOI: 10.1534/G3.119.400186  0.357
2018 Eidem HR, Steenwyk JL, Wisecaver JH, Capra JA, Abbot P, Rokas A. integRATE: a desirability-based data integration framework for the prioritization of candidate genes across heterogeneous omics and its application to preterm birth. Bmc Medical Genomics. 11: 107. PMID 30453955 DOI: 10.1186/S12920-018-0426-Y  0.331
2018 Birnbaum SSL, Rinker DC, Abbot P. Maintaining Biological Cultures and Measuring Gene Expression in Aphis nerii: A Non-model System for Plant-insect Interactions. Journal of Visualized Experiments : Jove. PMID 30222148 DOI: 10.3791/58044  0.496
2018 Heath JJ, Abbot P, Stireman JO. Adaptive Divergence in a Defense Symbiosis Driven from the Top Down. The American Naturalist. 192: E21-E36. PMID 29897808 DOI: 10.1086/697446  0.715
2018 Abbot P, Tooker J, Lawson SP. Chemical Ecology and Sociality in Aphids: Opportunities and Directions. Journal of Chemical Ecology. PMID 29637490 DOI: 10.1007/S10886-018-0955-Z  0.42
2018 Moon JM, Aronoff DM, Capra JA, Abbot P, Rokas A. Examination of Signatures of Recent Positive Selection on Genes Involved in Human Sialic Acid Biology. G3 (Bethesda, Md.). PMID 29467190 DOI: 10.1534/G3.118.200035  0.368
2017 Birnbaum SSL, Rinker DC, Gerardo NM, Abbot P. Transcriptional profile and differential fitness in a specialist milkweed insect across host plants varying in toxicity. Molecular Ecology. 26: 6742-6761. PMID 29110382 DOI: 10.1111/Mec.14401  0.732
2017 Eidem HR, McGary KL, Capra JA, Abbot P, Rokas A. The transformative potential of an integrative approach to pregnancy. Placenta. 57: 204-215. PMID 28864013 DOI: 10.1016/J.Placenta.2017.07.010  0.33
2017 Lawson SP, Sigle L, Lind A, Legan AW, Mezzanotte JN, Honegger HW, Abbot P. An alternative pathway to eusociality: Exploring the molecular and functional basis of fortress defense. Evolution; International Journal of Organic Evolution. PMID 28608545 DOI: 10.1111/Evo.13285  0.414
2015 Hirbo J, Eidem H, Rokas A, Abbot P. Integrating Diverse Types of Genomic Data to Identify Genes that Underlie Adverse Pregnancy Phenotypes. Plos One. 10: e0144155. PMID 26641094 DOI: 10.1371/Journal.Pone.0144155  0.341
2015 Kim M, Cooper BA, Venkat R, Phillips JB, Eidem HR, Hirbo J, Nutakki S, Williams SM, Muglia LJ, Capra JA, Petren K, Abbot P, Rokas A, McGary KL. GEneSTATION 1.0: a synthetic resource of diverse evolutionary and functional genomic data for studying the evolution of pregnancy-associated tissues and phenotypes. Nucleic Acids Research. PMID 26567549 DOI: 10.1093/Nar/Gkv1137  0.348
2015 Miller DG, Lawson SP, Rinker DC, Estby H, Abbot P. The origin and genetic differentiation of the socially parasitic aphid Tamalia inquilinus. Molecular Ecology. PMID 26460808 DOI: 10.1111/Mec.13423  0.52
2015 Phillips JB, Abbot P, Rokas A. Is Preterm Birth a Human-Specific Syndrome? Evolution, Medicine, and Public Health. PMID 26077822 DOI: 10.1093/Emph/Eov010  0.318
2015 Abbot P. The physiology and genomics of social transitions in aphids Advances in Insect Physiology. 48: 163-188. DOI: 10.1016/Bs.Aiip.2014.12.005  0.321
2014 Lawson SP, Legan AW, Graham C, Abbot P. Comparative phenotyping across a social transition in aphids Animal Behaviour. 96: 117-125. DOI: 10.1016/J.Anbehav.2014.08.003  0.362
2014 Lawson SP, Christian N, Abbot P. Comparative analysis of the biodiversity of fungal endophytes in insect-induced galls and surrounding foliar tissue Fungal Diversity. 66: 89-97. DOI: 10.1007/S13225-013-0268-Z  0.466
2013 Cobbs C, Heath J, Stireman JO, Abbot P. Carotenoids in unexpected places: gall midges, lateral gene transfer, and carotenoid biosynthesis in animals. Molecular Phylogenetics and Evolution. 68: 221-8. PMID 23542649 DOI: 10.1016/J.Ympev.2013.03.012  0.663
2012 Stireman JO, Devlin H, Abbot P. Rampant host- and defensive phenotype-associated diversification in a goldenrod gall midge. Journal of Evolutionary Biology. 25: 1991-2004. PMID 22882228 DOI: 10.1111/J.1420-9101.2012.02576.X  0.753
2012 Erickson DM, Wood EA, Oliver KM, Billick I, Abbot P. The effect of ants on the population dynamics of a protective symbiont of aphids, Hamiltonella defensa Annals of the Entomological Society of America. 105: 447-453. DOI: 10.1603/AN11176  0.476
2011 Abbot P. A closer look at the spatial architecture of aphid clones. Molecular Ecology. 20: 4587-9. PMID 22145161 DOI: 10.1111/J.1365-294X.2011.05300.X  0.411
2011 Abbot P, Abe J, Alcock J, Alizon S, Alpedrinha JA, Andersson M, Andre JB, van Baalen M, Balloux F, Balshine S, Barton N, Beukeboom LW, Biernaskie JM, Bilde T, Borgia G, et al. Inclusive fitness theory and eusociality. Nature. 471: E1-4; author reply E. PMID 21430721 DOI: 10.1038/Nature09831  0.676
2011 Cafaro MJ, Poulsen M, Little AE, Price SL, Gerardo NM, Wong B, Stuart AE, Larget B, Abbot P, Currie CR. Specificity in the symbiotic association between fungus-growing ants and protective Pseudonocardia bacteria. Proceedings. Biological Sciences / the Royal Society. 278: 1814-22. PMID 21106596 DOI: 10.1098/Rspb.2010.2118  0.677
2010 Janson EM, Peeden ER, Stireman JO, Abbot P. Symbiont-mediated phenotypic variation without co-evolution in an insect-fungus association. Journal of Evolutionary Biology. 23: 2212-28. PMID 20840311 DOI: 10.1111/J.1420-9101.2010.02082.X  0.769
2010 Mikheyev AS, Mueller UG, Abbot P. Comparative dating of attine ant and lepiotaceous cultivar phylogenies reveals coevolutionary synchrony and discord. The American Naturalist. 175: E126-33. PMID 20415533 DOI: 10.1086/652472  0.761
2010 Grogan KE, Chhatre VE, Abbot P. The cost of conflict in aphid societies. Journal of Evolutionary Biology. 23: 185-93. PMID 19912452 DOI: 10.1111/J.1420-9101.2009.01892.X  0.309
2010 Stireman JO, Devlin H, Carr TG, Abbot P. Evolutionary diversification of the gall midge genus Asteromyia (Cecidomyiidae) in a multitrophic ecological context. Molecular Phylogenetics and Evolution. 54: 194-210. PMID 19765662 DOI: 10.1016/J.Ympev.2009.09.010  0.75
2009 Chhatre V, Morales MA, Abbot P. Isolation and characterization of nine microsatellite loci in an ant-tended treehopper Publilia concava. Molecular Ecology Resources. 9: 1185-8. PMID 21564870 DOI: 10.1111/J.1755-0998.2009.02598.X  0.399
2009 Janson EM, Grebenok RJ, Behmer ST, Abbot P. Same host-plant, different sterols: variation in sterol metabolism in an insect herbivore community. Journal of Chemical Ecology. 35: 1309-19. PMID 19943186 DOI: 10.1007/S10886-009-9713-6  0.763
2009 Gibbons JG, Janson EM, Hittinger CT, Johnston M, Abbot P, Rokas A. Benchmarking next-generation transcriptome sequencing for functional and evolutionary genomics. Molecular Biology and Evolution. 26: 2731-44. PMID 19706727 DOI: 10.1093/Molbev/Msp188  0.731
2009 Abbot P. On the evolution of dispersal and altruism in aphids. Evolution; International Journal of Organic Evolution. 63: 2687-96. PMID 19500147 DOI: 10.1111/J.1558-5646.2009.00744.X  0.393
2009 Rokas A, Abbot P. Harnessing genomics for evolutionary insights. Trends in Ecology & Evolution. 24: 192-200. PMID 19201503 DOI: 10.1016/J.Tree.2008.11.004  0.328
2008 Janson EM, Stireman JO, Singer MS, Abbot P. Phytophagous insect-microbe mutualisms and adaptive evolutionary diversification. Evolution; International Journal of Organic Evolution. 62: 997-1012. PMID 18298649 DOI: 10.1111/J.1558-5646.2008.00348.X  0.775
2008 Abbot P, Grinath J, Brown J, Peeden E, Erickson D, Billick I. Insect herbivore stoichiometry: The relative importance of host plants and ant mutualists Ecological Entomology. 33: 497-502. DOI: 10.1111/J.1365-2311.2008.00993.X  0.377
2008 Stireman JO, Janson EM, Carr TG, Devlin H, Abbot P. Evolutionary radiation of Asteromyia carbonifera (Diptera: Cecidomyiidae) gall morphotypes on the goldenrod Solidago altissima (Asteraceae) Biological Journal of the Linnean Society. 95: 840-858. DOI: 10.1111/J.1095-8312.2008.01101.X  0.777
2007 Abbot P, Chhatre V. Kin structure provides no explanation for intruders in social aphids. Molecular Ecology. 16: 3659-70. PMID 17845438 DOI: 10.1111/J.1365-294X.2007.03404.X  0.407
2007 Abbot P, Aviles AE, Eller L, Durden LA. Mixed infections, cryptic diversity, and vector-borne pathogens: evidence from Polygenis fleas and Bartonella species. Applied and Environmental Microbiology. 73: 6045-52. PMID 17693558 DOI: 10.1128/Aem.00228-07  0.369
2007 Billick I, Hammer S, Reithel JS, Abbot P. Ant-aphid interactions: Are ants friends, enemies, or both? Annals of the Entomological Society of America. 100: 887-892. DOI: 10.1603/0013-8746(2007)100[887:Aiaafe]2.0.Co;2  0.42
2006 Mikheyev AS, Mueller UG, Abbot P. Cryptic sex and many-to-one coevolution in the fungus-growing ant symbiosis. Proceedings of the National Academy of Sciences of the United States of America. 103: 10702-6. PMID 16815974 DOI: 10.1073/Pnas.0601441103  0.756
2004 Abbot P, Withgott JH. Phylogenetic and molecular evidence for allochronic speciation in gall-forming aphids (Pemphigus). Evolution; International Journal of Organic Evolution. 58: 539-53. PMID 15119438  0.361
2002 Abbot P, Moran NA. Extremely low levels of genetic polymorphism in endosymbionts (Buchnera) of aphids (Pemphigus). Molecular Ecology. 11: 2649-60. PMID 12453247 DOI: 10.1046/J.1365-294X.2002.01646.X  0.553
2001 Abbot P. Individual and population variation in invertebrates revealed by Inter-simple Sequence Repeats (ISSRs). Journal of Insect Science (Online). 1: 8. PMID 15455068  0.322
2001 Abbot P, Withgott JH, Moran NA. Genetic conflict and conditional altruism in social aphid colonies. Proceedings of the National Academy of Sciences of the United States of America. 98: 12068-71. PMID 11562469 DOI: 10.1073/Pnas.201212698  0.481
2000 Thao ML, Moran NA, Abbot P, Brennan EB, Burckhardt DH, Baumann P. Cospeciation of psyllids and their primary prokaryotic endosymbionts. Applied and Environmental Microbiology. 66: 2898-905. PMID 10877784 DOI: 10.1128/Aem.66.7.2898-2905.2000  0.577
1999 Crespi B, Abbot P. The behavioral ecology and evolution of kleptoparasitism in Australian gall thrips Florida Entomologist. 82: 147-164. DOI: 10.2307/3496568  0.49
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