Michael J. Landis - Publications

Affiliations: 
Washington University, Saint Louis, St. Louis, MO 
 University of California, Berkeley, Berkeley, CA, United States 
 Yale University, New Haven, CT 
Area:
phylogenetics, revbayes, comparative methods development
Website:
http://landislab.org

25 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 McHugh SW, Donoghue MJ, Landis MJ. A Phylogenetic Model of Established and Enabled Biome Shifts. Biorxiv : the Preprint Server For Biology. PMID 39282335 DOI: 10.1101/2024.08.30.610561  0.586
2024 Landis MJ, Thompson A. phyddle: software for phylogenetic model exploration with deep learning. Biorxiv : the Preprint Server For Biology. PMID 39149349 DOI: 10.1101/2024.08.06.606717  0.362
2024 Mendes FAK, Landis MJ. PhyloJunction: a computational framework for simulating, developing, and teaching evolutionary models. Systematic Biology. PMID 39115380 DOI: 10.1093/sysbio/syae048  0.444
2024 Soewongsono AC, Landis MJ. A Diffusion-Based Approach for Simulating Forward-in-Time State-Dependent Speciation and Extinction Dynamics. Bulletin of Mathematical Biology. 86: 101. PMID 38970749 DOI: 10.1007/s11538-024-01337-6  0.362
2024 Soewongsono AC, Landis MJ. A Diffusion-Based Approach for Simulating Forward-in-Time State-Dependent Speciation and Extinction Dynamics. Arxiv. PMID 38351931  0.685
2024 Thompson A, Liebeskind B, Scully EJ, Landis M. Deep learning and likelihood approaches for viral phylogeography converge on the same answers whether the inference model is right or wrong. Systematic Biology. PMID 38189575 DOI: 10.1093/sysbio/syad074  0.746
2023 Mendes FK, Landis MJ. PhyloJunction: a computational framework for simulating, developing, and teaching evolutionary models. Biorxiv : the Preprint Server For Biology. PMID 38168278 DOI: 10.1101/2023.12.15.571907  0.772
2023 Kawahara AY, Storer C, Carvalho APS, Plotkin DM, Condamine FL, Braga MP, Ellis EA, St Laurent RA, Li X, Barve V, Cai L, Earl C, Frandsen PB, Owens HL, Valencia-Montoya WA, ... ... Landis MJ, et al. A global phylogeny of butterflies reveals their evolutionary history, ancestral hosts and biogeographic origins. Nature Ecology & Evolution. PMID 37188966 DOI: 10.1038/s41559-023-02041-9  0.569
2023 Quintero I, Landis MJ, Jetz W, Morlon H. The build-up of the present-day tropical diversity of tetrapods. Proceedings of the National Academy of Sciences of the United States of America. 120: e2220672120. PMID 37159475 DOI: 10.1073/pnas.2220672120  0.315
2022 Donoghue MJ, Eaton DAR, Maya-Lastra CA, Landis MJ, Sweeney PW, Olson ME, Cacho NI, Moeglein MK, Gardner JR, Heaphy NM, Castorena M, Rivas AS, Clement WL, Edwards EJ. Publisher Correction: Replicated radiation of a plant clade along a cloud forest archipelago. Nature Ecology & Evolution. PMID 35927318 DOI: 10.1038/s41559-022-01864-2  0.602
2022 Donoghue MJ, Eaton DAR, Maya-Lastra CA, Landis MJ, Sweeney PW, Olson ME, Cacho NI, Moeglein MK, Gardner JR, Heaphy NM, Castorena M, Rivas AS, Clement WL, Edwards EJ. Replicated radiation of a plant clade along a cloud forest archipelago. Nature Ecology & Evolution. PMID 35851851 DOI: 10.1038/s41559-022-01823-x  0.65
2022 Landis MJ, Quintero I, Muñoz MM, Zapata F, Donoghue MJ. Phylogenetic inference of where species spread or split across barriers. Proceedings of the National Academy of Sciences of the United States of America. 119: e2116948119. PMID 35333650 DOI: 10.1073/pnas.2116948119  0.535
2022 Wendt EW, Malabarba LR, Braga MP, Boeger WA, Landis M, Carvalho TP. Phylogeny, species delimitation, and ecological and morphological diversity of (Monogenoidea: Dactylogyridae). Parasitology. 1-54. PMID 35236513 DOI: 10.1017/S0031182022000221  0.543
2021 Höhna S, Landis MJ, Huelsenbeck JP. Parallel power posterior analyses for fast computation of marginal likelihoods in phylogenetics. Peerj. 9: e12438. PMID 34760401 DOI: 10.7717/peerj.12438  0.609
2021 Braga MP, Janz N, Nylin S, Ronquist F, Landis MJ. Phylogenetic reconstruction of ancestral ecological networks through time for pierid butterflies and their host plants. Ecology Letters. PMID 34297474 DOI: 10.1111/ele.13842  0.579
2020 Landis MJ, Edwards EJ, Donoghue MJ. Modeling phylogenetic biome shifts on a planet with a past. Systematic Biology. PMID 32514540 DOI: 10.1093/Sysbio/Syaa045  0.728
2020 Landis MJ, Eaton DAR, Clement WL, Park B, Spriggs EL, Sweeney PW, Edwards EJ, Donoghue MJ. Joint phylogenetic estimation of geographic movements and biome shifts during the global diversification of Viburnum. Systematic Biology. PMID 32267945 DOI: 10.1093/Sysbio/Syaa027  0.672
2020 Braga MP, Landis MJ, Nylin S, Janz N, Ronquist F. Bayesian Inference of Ancestral Host-parasite Interactions under a Phylogenetic Model of Host Repertoire Evolution. Systematic Biology. PMID 32191324 DOI: 10.1093/sysbio/syaa019  0.547
2019 Quintero I, Landis MJ. Interdependent Phenotypic and Biogeographic Evolution Driven by Biotic Interactions. Systematic Biology. PMID 31860094 DOI: 10.1093/Sysbio/Syz082  0.404
2018 Park B, Sinnott-Armstrong M, Schlutius C, Zuluaga JP, Spriggs EL, Simpson RG, Benavides E, Landis MJ, Sweeney PW, Eaton DAR, Donoghue MJ. Sterile marginal flowers increase visitation and fruit set in the hobblebush (Viburnum lantanoides, Adoxaceae) at multiple spatial scales. Annals of Botany. PMID 29982369 DOI: 10.1093/aob/mcy117  0.439
2017 Höhna S, Landis MJ, Heath TA. Phylogenetic Inference Using RevBayes. Current Protocols in Bioinformatics. 57: 6.16.1-6.16.34. PMID 28463399 DOI: 10.1002/Cpbi.22  0.763
2016 Höhna S, Landis MJ, Heath TA, Boussau B, Lartillot N, Moore BR, Huelsenbeck JP, Ronquist F. RevBayes: Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language. Systematic Biology. PMID 27235697 DOI: 10.1093/Sysbio/Syw021  0.726
2014 Höhna S, Heath TA, Boussau B, Landis MJ, Ronquist F, Huelsenbeck JP. Probabilistic graphical model representation in phylogenetics. Systematic Biology. 63: 753-71. PMID 24951559 DOI: 10.1093/Sysbio/Syu039  0.759
2013 Landis MJ, Matzke NJ, Moore BR, Huelsenbeck JP. Bayesian analysis of biogeography when the number of areas is large. Systematic Biology. 62: 789-804. PMID 23736102 DOI: 10.1093/Sysbio/Syt040  0.778
2013 Landis MJ, Schraiber JG, Liang M. Phylogenetic analysis using Lévy processes: finding jumps in the evolution of continuous traits. Systematic Biology. 62: 193-204. PMID 23034385 DOI: 10.1093/Sysbio/Sys086  0.311
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