Jason C. Slot, Ph.D. - Publications

2013- Plant Pathology Ohio State University, Columbus, Columbus, OH 
fungal evolutionary genomics

51 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Slot JC, Kasson MT. Ecology: Fungal mimics dupe animals by transforming plants. Current Biology : Cb. 31: 1811. PMID 33905684 DOI: 10.1016/j.cub.2021.03.085  0.04
2021 Slot JC, Kasson MT. Ecology: Fungal Mimics Dupe Animals by Transforming Plants. Current Biology : Cb. 31: R250-R252. PMID 33689724 DOI: 10.1016/j.cub.2021.01.013  0.01
2021 Konkel Z, Scott K, Slot JC. Draft Genome Sequence of the Termite-Associated "Cuckoo Fungus," () sp. TMB Strain TB5. Microbiology Resource Announcements. 10. PMID 33414338 DOI: 10.1128/MRA.01230-20  0.01
2020 Valero-Jiménez CA, Steentjes MBF, Slot JC, Shi-Kunne X, Scholten OE, van Kan JAL. Dynamics in Secondary Metabolite Gene Clusters in Otherwise Highly Syntenic and Stable Genomes in the Fungal Genus Botrytis. Genome Biology and Evolution. 12: 2491-2507. PMID 33283866 DOI: 10.1093/gbe/evaa218  0.52
2020 Gluck-Thaler E, Cerutti A, Perez-Quintero AL, Butchacas J, Roman-Reyna V, Madhavan VN, Shantharaj D, Merfa MV, Pesce C, Jauneau A, Vancheva T, Lang JM, Allen C, Verdier V, Gagnevin L, ... ... Slot JC, et al. Repeated gain and loss of a single gene modulates the evolution of vascular plant pathogen lifestyles. Science Advances. 6. PMID 33188025 DOI: 10.1126/sciadv.abc4516  0.96
2020 Goughenour KD, Whalin J, Slot JC, Rappleye CA. Diversification of fungal chitinases and their functional differentiation in Histoplasma capsulatum. Molecular Biology and Evolution. PMID 33185664 DOI: 10.1093/molbev/msaa293  0.01
2020 Wang YW, Hess J, Slot JC, Pringle A. De novo gene birth, horizontal gene transfer and gene duplication as sources of new gene families associated with the origin of symbiosis in Amanita. Genome Biology and Evolution. PMID 32926145 DOI: 10.1093/Gbe/Evaa193  0.01
2020 Gluck-Thaler E, Haridas S, Binder M, Grigoriev IV, Crous PW, Spatafora JW, Bushley K, Slot JC. The architecture of metabolism maximizes biosynthetic diversity in the largest class of fungi. Molecular Biology and Evolution. PMID 32421770 DOI: 10.1093/Molbev/Msaa122  0.01
2020 Farinas C, Jourdan PS, Paul PA, Slot JC, Daughtrey M, Devi Ganeshan V, Baysal-Gurel F, Peduto Hand F. species show quantitative and qualitative resistance to a population of powdery mildew isolates from the eastern United States. Phytopathology. PMID 32252592 DOI: 10.1094/Phyto-12-19-0473-R  0.44
2020 Wolff PB, Nielsen ML, Slot JC, Andersen LN, Petersen LM, Isbrandt T, Holm DK, Mortensen UH, Nødvig CS, Larsen TO, Hoof JB. Acurin A, a novel hybrid compound, biosynthesized by individually translated PKS- and NRPS-encoding genes in Aspergillus aculeatus. Fungal Genetics and Biology : Fg & B. 103378. PMID 32234543 DOI: 10.1016/J.Fgb.2020.103378  0.01
2019 Boyce GR, Gluck-Thaler E, Slot JC, Stajich JE, Davis WJ, James TY, Cooley JR, Panaccione DG, Eilenberg J, De Fine Licht HH, Macias AM, Berger MC, Wickert KL, Stauder CM, Spahr EJ, et al. Psychoactive plant- and mushroom-associated alkaloids from two behavior modifying cicada pathogens. Fungal Ecology. 41: 147-164. PMID 31768192 DOI: 10.1016/J.Funeco.2019.06.002  0.96
2019 Farinas C, Gluck-Thaler E, Slot JC, Peduto Hand F. Whole-Genome Sequence of the Phlox Powdery Mildew Pathogen Golovinomyces magnicellulatus Strain FPH2017-1. Microbiology Resource Announcements. 8. PMID 31488536 DOI: 10.1128/MRA.00852-19  0.96
2019 Slot JC, Gluck-Thaler E. Metabolic gene clusters, fungal diversity, and the generation of accessory functions. Current Opinion in Genetics & Development. 58: 17-24. PMID 31466036 DOI: 10.1016/J.Gde.2019.07.006  0.96
2019 Armaleo D, Müller O, Lutzoni F, Andrésson ÓS, Blanc G, Bode HB, Collart FR, Dal Grande F, Dietrich F, Grigoriev IV, Joneson S, Kuo A, Larsen PE, Logsdon JM, Lopez D, ... ... Slot JC, et al. The lichen symbiosis re-viewed through the genomes of Cladonia grayi and its algal partner Asterochloris glomerata. Bmc Genomics. 20: 605. PMID 31337355 DOI: 10.1186/S12864-019-5629-X  0.01
2019 Olarte RA, Menke J, Zhang Y, Sullivan S, Slot JC, Huang Y, Badalamenti JP, Quandt AC, Spatafora JW, Bushley KE. Chromosome rearrangements shape the diversification of secondary metabolism in the cyclosporin producing fungus Tolypocladium inflatum. Bmc Genomics. 20: 120. PMID 30732559 DOI: 10.1186/S12864-018-5399-X  0.04
2018 Gluck-Thaler E, Vijayakumar V, Slot JC. Fungal adaptation to plant defenses through convergent assembly of metabolic modules. Molecular Ecology. PMID 30427102 DOI: 10.1111/Mec.14943  0.96
2018 Reynolds HT, Vijayakumar V, Gluck-Thaler E, Korotkin HB, Matheny PB, Slot JC. Horizontal gene cluster transfer increased hallucinogenic mushroom diversity. Evolution Letters. 2: 88-101. PMID 30283667 DOI: 10.1002/evl3.42  0.96
2018 Blei F, Fricke J, Wick J, Slot J, Hoffmeister D. Iterative L-tryptophan methylation in Psilocybe evolved by sub-domain duplication. Chembiochem : a European Journal of Chemical Biology. PMID 30098085 DOI: 10.1002/Cbic.201800336  0.01
2018 Gluck-Thaler E, Slot JC. Specialized plant biochemistry drives gene clustering in fungi. The Isme Journal. PMID 29463891 DOI: 10.1038/S41396-018-0075-3  0.96
2018 Sipos G, Prasanna AN, Walter MC, O'Connor E, Bálint B, Krizsán K, Kiss B, Hess J, Varga T, Slot J, Riley R, Bóka B, Rigling D, Barry K, Lee J, et al. Author Correction: Genome expansion and lineage-specific genetic innovations in the forest pathogenic fungi Armillaria. Nature Ecology & Evolution. PMID 29426895 DOI: 10.1038/S41559-018-0469-7  0.01
2018 Ewing CJ, Hausman CE, Pogacnik J, Slot J, Bonello P. Beech leaf disease: An emerging forest epidemic Forest Pathology. 49: e12488. DOI: 10.1111/Efp.12488  0.01
2017 Slot JC. Fungal Gene Cluster Diversity and Evolution. Advances in Genetics. 100: 141-178. PMID 29153399 DOI: 10.1016/Bs.Adgen.2017.09.005  0.01
2017 Sipos G, Prasanna AN, Walter MC, O'Connor E, Bálint B, Krizsán K, Kiss B, Hess J, Varga T, Slot J, Riley R, Bóka B, Rigling D, Barry K, Lee J, et al. Genome expansion and lineage-specific genetic innovations in the forest pathogenic fungi Armillaria. Nature Ecology & Evolution. PMID 29085064 DOI: 10.1038/S41559-017-0347-8  0.01
2017 Nagy LG, Tóth R, Kiss E, Slot J, Gácser A, Kovács GM. Six Key Traits of Fungi: Their Evolutionary Origins and Genetic Bases. Microbiology Spectrum. 5. PMID 28820115 DOI: 10.1128/Microbiolspec.Funk-0036-2016  0.01
2017 Reynolds H, Slot JC, Divon HH, Lysøe E, Proctor RH, Brown DW. Differential retention of gene functions in a secondary metabolite cluster. Molecular Biology and Evolution. PMID 28460114 DOI: 10.1093/Molbev/Msx145  0.01
2016 Riley R, Haridas S, Wolfe KH, Lopes MR, Hittinger CT, Göker M, Salamov AA, Wisecaver JH, Long TM, Calvey CH, Aerts AL, Barry KW, Choi C, Clum A, Coughlan AY, ... ... Slot JC, et al. Comparative genomics of biotechnologically important yeasts. Proceedings of the National Academy of Sciences of the United States of America. PMID 27535936 DOI: 10.1073/Pnas.1603941113  1
2016 Staehlin BM, Gibbons JG, Rokas A, O'Halloran TV, Slot JC. Evolution of a heavy metal homeostasis/resistance island reflects increasing copper stress in Enterobacteria. Genome Biology and Evolution. PMID 26893455 DOI: 10.1093/Gbe/Evw031  1
2016 Reynolds HT, Barton HA, Slot JC. Phylogenomic analysis supports a recent change in nitrate assimilation in the White-nose Syndrome pathogen, Pseudogymnoascus destructans Fungal Ecology. 23: 20-29. DOI: 10.1016/J.Funeco.2016.04.010  0.12
2015 Gluck-Thaler E, Slot JC. Dimensions of Horizontal Gene Transfer in Eukaryotic Microbial Pathogens. Plos Pathogens. 11: e1005156. PMID 26513155 DOI: 10.1371/Journal.Ppat.1005156  1
2015 Wisecaver JH, Slot JC, Rokas A. Correction: The Evolution of Fungal Metabolic Pathways. Plos Genetics. 11: e1005449. PMID 26378934 DOI: 10.1371/Journal.Pgen.1005449  1
2015 Elmore MH, McGary KL, Wisecaver JH, Slot JC, Geiser DM, Sink S, O'Donnell K, Rokas A. Clustering of two genes putatively involved in cyanate detoxification evolved recently and independently in multiple fungal lineages. Genome Biology and Evolution. 7: 789-800. PMID 25663439 DOI: 10.1093/Gbe/Evv025  1
2014 Wisecaver JH, Slot JC, Rokas A. The evolution of fungal metabolic pathways. Plos Genetics. 10: e1004816. PMID 25474404 DOI: 10.1371/Journal.Pgen.1004816  1
2014 Greene GH, McGary KL, Rokas A, Slot JC. Ecology drives the distribution of specialized tyrosine metabolism modules in fungi. Genome Biology and Evolution. 6: 121-32. PMID 24391152 DOI: 10.1093/Gbe/Evt208  1
2013 Campbell MA, Staats M, van Kan JA, Rokas A, Slot JC. Repeated loss of an anciently horizontally transferred gene cluster in Botrytis. Mycologia. 105: 1126-34. PMID 23921237 DOI: 10.3852/12-390  1
2013 McGary KL, Slot JC, Rokas A. Physical linkage of metabolic genes in fungi is an adaptation against the accumulation of toxic intermediate compounds. Proceedings of the National Academy of Sciences of the United States of America. 110: 11481-6. PMID 23798424 DOI: 10.1073/Pnas.1304461110  1
2013 Bradshaw RE, Slot JC, Moore GG, Chettri P, de Wit PJ, Ehrlich KC, Ganley AR, Olson MA, Rokas A, Carbone I, Cox MP. Fragmentation of an aflatoxin-like gene cluster in a forest pathogen. The New Phytologist. 198: 525-35. PMID 23448391 DOI: 10.1111/Nph.12161  1
2012 Zhang H, Rokas A, Slot JC. Two different secondary metabolism gene clusters occupied the same ancestral locus in fungal dermatophytes of the arthrodermataceae. Plos One. 7: e41903. PMID 22860027 DOI: 10.1371/Journal.Pone.0041903  1
2012 Gibbons JG, Salichos L, Slot JC, Rinker DC, McGary KL, King JG, Klich MA, Tabb DL, McDonald WH, Rokas A. The evolutionary imprint of domestication on genome variation and function of the filamentous fungus Aspergillus oryzae. Current Biology : Cb. 22: 1403-9. PMID 22795693 DOI: 10.1016/J.Cub.2012.05.033  1
2012 League GP, Slot JC, Rokas A. The ASP3 locus in Saccharomyces cerevisiae originated by horizontal gene transfer from Wickerhamomyces. Fems Yeast Research. 12: 859-63. PMID 22776361 DOI: 10.1111/J.1567-1364.2012.00828.X  1
2012 Floudas D, Binder M, Riley R, Barry K, Blanchette RA, Henrissat B, Martínez AT, Otillar R, Spatafora JW, Yadav JS, Aerts A, Benoit I, Boyd A, Carlson A, Copeland A, ... ... Slot JC, et al. The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. Science (New York, N.Y.). 336: 1715-9. PMID 22745431 DOI: 10.1126/Science.1221748  1
2012 Stergiopoulos I, Kourmpetis YA, Slot JC, Bakker FT, De Wit PJ, Rokas A. In silico characterization and molecular evolutionary analysis of a novel superfamily of fungal effector proteins. Molecular Biology and Evolution. 29: 3371-84. PMID 22628532 DOI: 10.1093/Molbev/Mss143  1
2012 Campbell MA, Rokas A, Slot JC. Horizontal transfer and death of a fungal secondary metabolic gene cluster. Genome Biology and Evolution. 4: 289-93. PMID 22294497 DOI: 10.1093/Gbe/Evs011  1
2011 Slot JC, Rokas A. Horizontal transfer of a large and highly toxic secondary metabolic gene cluster between fungi. Current Biology : Cb. 21: 134-9. PMID 21194949 DOI: 10.1016/J.Cub.2010.12.020  1
2010 Slot JC, Rokas A. Multiple GAL pathway gene clusters evolved independently and by different mechanisms in fungi. Proceedings of the National Academy of Sciences of the United States of America. 107: 10136-41. PMID 20479238 DOI: 10.1073/Pnas.0914418107  1
2010 Slot JC, Hallstrom KN, Matheny PB, Hosaka K, Mueller G, Robertson DL, Hibbett DS. Phylogenetic, structural and functional diversification of nitrate transporters in three ecologically diverse clades of mushroom-forming fungi Fungal Ecology. 3: 160-177. DOI: 10.1016/J.Funeco.2009.10.001  1
2007 Slot JC, Hibbett DS. Horizontal transfer of a nitrate assimilation gene cluster and ecological transitions in fungi: a phylogenetic study. Plos One. 2: e1097. PMID 17971860 DOI: 10.1371/Journal.Pone.0001097  1
2007 Slot JC, Hallstrom KN, Matheny PB, Hibbett DS. Diversification of NRT2 and the origin of its fungal homolog. Molecular Biology and Evolution. 24: 1731-43. PMID 17513882 DOI: 10.1093/Molbev/Msm098  1
2007 Matheny PB, Wang Z, Binder M, Curtis JM, Lim YW, Nilsson RH, Hughes KW, Hofstetter V, Ammirati JF, Schoch CL, Langer E, Langer G, McLaughlin DJ, Wilson AW, Frøslev T, ... ... Slot JC, et al. Contributions of rpb2 and tef1 to the phylogeny of mushrooms and allies (Basidiomycota, Fungi). Molecular Phylogenetics and Evolution. 43: 430-51. PMID 17081773 DOI: 10.1016/J.Ympev.2006.08.024  1
2006 Matheny PB, Curtis JM, Hofstetter V, Aime MC, Moncalvo JM, Ge ZW, Slot JC, Ammirati JF, Baroni TJ, Bougher NL, Hughes KW, Lodge DJ, Kerrigan RW, Seidl MT, Aanen DK, et al. Major clades of Agaricales: a multilocus phylogenetic overview. Mycologia. 98: 982-95. PMID 17486974 DOI: 10.3852/Mycologia.98.6.982  1
2006 James TY, Kauff F, Schoch CL, Matheny PB, Hofstetter V, Cox CJ, Celio G, Gueidan C, Fraker E, Miadlikowska J, Lumbsch HT, Rauhut A, Reeb V, Arnold AE, Amtoft A, ... ... Slot JC, et al. Reconstructing the early evolution of Fungi using a six-gene phylogeny. Nature. 443: 818-22. PMID 17051209 DOI: 10.1038/Nature05110  1
2005 Yang ZL, Matheny PB, Ge ZW, Slot JC, Hibbett DS. New Asian species of the genus Anamika (euagarics, hebelomatoid clade) based on morphology and ribosomal DNA sequences. Mycological Research. 109: 1259-67. PMID 16279419 DOI: 10.1017/S0953756205003758  1
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