Scott A. Rifkin, Ph.D. - Publications

Affiliations: 
Biological Sciences University of California, San Diego, La Jolla, CA 
Website:
http://www.biology.ucsd.edu/labs/rifkin/index.html

26 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Welkie DG, Rubin BE, Chang YG, Diamond S, Rifkin SA, LiWang A, Golden SS. Genome-wide fitness assessment during diurnal growth reveals an expanded role of the cyanobacterial circadian clock protein KaiA. Proceedings of the National Academy of Sciences of the United States of America. PMID 29991601 DOI: 10.1073/pnas.1802940115  0.32
2018 Rubin BE, Huynh TN, Welkie DG, Diamond S, Simkovsky R, Pierce EC, Taton A, Lowe LC, Lee JJ, Rifkin SA, Woodward JJ, Golden SS. High-throughput interaction screens illuminate the role of c-di-AMP in cyanobacterial nighttime survival. Plos Genetics. 14: e1007301. PMID 29608558 DOI: 10.1371/journal.pgen.1007301  0.32
2017 Stockwell SR, Rifkin SA. A living vector field reveals constraints on galactose network induction in yeast. Molecular Systems Biology. 13: 908. PMID 28137775  0.64
2015 Chen Y, Kintner J, Rifkin SK, Keim KS, Tangney CC. Changes in Resting Energy Expenditure Following Orthotopic Liver Transplantation. Jpen. Journal of Parenteral and Enteral Nutrition. PMID 25940610 DOI: 10.1177/0148607115586435  0.36
2015 Stockwell SR, Landry CR, Rifkin SA. The yeast galactose network as a quantitative model for cellular memory. Molecular Biosystems. 11: 28-37. PMID 25328105 DOI: 10.1039/c4mb00448e  0.92
2013 Kim S, Rifkin S, John SM, Jacob KS. Nature, prevalence and risk factors of alcohol use in an urban slum of Southern India. The National Medical Journal of India. 26: 203-9. PMID 24758442  0.36
2012 Rifkin SB, Owens LE, Greenwald JL. Factors associated with false-positive results from fingerstick OraQuick ADVANCE rapid HIV 1/2 antibody test. Journal of the International Association of Physicians in Aids Care (Chicago, Ill. : 2002). 11: 356-60. PMID 23015378 DOI: 10.1177/1545109712454194  0.36
2012 Landry CR, Rifkin SA. The genotype-phenotype maps of systems biology and quantitative genetics: distinct and complementary. Advances in Experimental Medicine and Biology. 751: 371-98. PMID 22821467 DOI: 10.1007/978-1-4614-3567-9_17  0.92
2012 Vidya M, Saravanan S, Rifkin S, Solomon SS, Waldrop G, Mayer KH, Solomon S, Balakrishnan P. Dried blood spots versus plasma for the quantitation of HIV-1 RNA using a real-Time PCR, m2000rt assay. Journal of Virological Methods. 181: 177-81. PMID 22401801 DOI: 10.1016/j.jviromet.2012.02.006  0.36
2012 Saravanan S, Vidya M, Balakrishnan P, Kantor R, Solomon SS, Katzenstein D, Kumarasamy N, Yeptomi T, Sivamalar S, Rifkin S, Mayer KH, Solomon S. Viremia and HIV-1 drug resistance mutations among patients receiving second-line highly active antiretroviral therapy in Chennai, Southern India. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 54: 995-1000. PMID 22323567 DOI: 10.1093/cid/cir967  0.36
2010 Landry CR, Rifkin SA. Chromatin regulators shape the genotype-phenotype map. Molecular Systems Biology. 6: 434. PMID 21119628 DOI: 10.1038/msb.2010.97  0.92
2010 Raj A, Rifkin SA, Andersen E, van Oudenaarden A. Variability in gene expression underlies incomplete penetrance. Nature. 463: 913-8. PMID 20164922 DOI: 10.1038/nature08781  0.4
2009 Rifkin SB, Smith MR, Brotman RM, Gindi RM, Erbelding EJ. Hormonal contraception and risk of bacterial vaginosis diagnosis in an observational study of women attending STD clinics in Baltimore, MD. Contraception. 80: 63-7. PMID 19501217 DOI: 10.1016/j.contraception.2009.01.008  0.36
2008 Raj A, van den Bogaard P, Rifkin SA, van Oudenaarden A, Tyagi S. Imaging individual mRNA molecules using multiple singly labeled probes. Nature Methods. 5: 877-9. PMID 18806792 DOI: 10.1038/nmeth.1253  0.4
2008 Gilad Y, Rifkin SA, Pritchard JK. Revealing the architecture of gene regulation: the promise of eQTL studies. Trends in Genetics : Tig. 24: 408-15. PMID 18597885 DOI: 10.1016/j.tig.2008.06.001  0.32
2007 Landry CR, Lemos B, Rifkin SA, Dickinson WJ, Hartl DL. Genetic properties influencing the evolvability of gene expression. Science (New York, N.Y.). 317: 118-21. PMID 17525304 DOI: 10.1126/science.1140247  0.92
2006 Gilad Y, Oshlack A, Rifkin SA. Natural selection on gene expression. Trends in Genetics : Tig. 22: 456-61. PMID 16806568 DOI: 10.1016/j.tig.2006.06.002  0.32
2005 Rifkin SA, Houle D, Kim J, White KP. A mutation accumulation assay reveals a broad capacity for rapid evolution of gene expression. Nature. 438: 220-3. PMID 16281035 DOI: 10.1038/nature04114  1
2005 Gilad Y, Rifkin SA, Bertone P, Gerstein M, White KP. Multi-species microarrays reveal the effect of sequence divergence on gene expression profiles. Genome Research. 15: 674-80. PMID 15867429 DOI: 10.1101/gr.3335705  0.96
2005 Carriero N, Osier MV, Cheung KH, Miller PL, Gerstein M, Zhao H, Wu B, Rifkin S, Chang J, Zhang H, White K, Williams K, Schultz M. A high productivity/low maintenance approach to high-performance computation for biomedicine: four case studies. Journal of the American Medical Informatics Association : Jamia. 12: 90-8. PMID 15492032 DOI: 10.1197/jamia.M1571  1
2004 Stolc V, Gauhar Z, Mason C, Halasz G, van Batenburg MF, Rifkin SA, Hua S, Herreman T, Tongprasit W, Barbano PE, Bussemaker HJ, White KP. A gene expression map for the euchromatic genome of Drosophila melanogaster. Science (New York, N.Y.). 306: 655-60. PMID 15499012 DOI: 10.1126/science.1101312  0.96
2004 Gu Z, Rifkin SA, White KP, Li WH. Duplicate genes increase gene expression diversity within and between species. Nature Genetics. 36: 577-9. PMID 15122255 DOI: 10.1038/ng1355  0.96
2003 Rifkin SA, Kim J, White KP. Evolution of gene expression in the Drosophila melanogaster subgroup. Nature Genetics. 33: 138-44. PMID 12548287 DOI: 10.1038/ng1086  1
2002 Rifkin SA, Kim J. Geometry of gene expression dynamics. Bioinformatics (Oxford, England). 18: 1176-83. PMID 12217909  1
2000 Rifkin SA, Atteson K, Kim J. Constraint structure analysis of gene expression. Functional & Integrative Genomics. 1: 174-85. PMID 11793235 DOI: 10.1007/s101420000018  1
1999 White KP, Rifkin SA, Hurban P, Hogness DS. Microarray analysis of Drosophila development during metamorphosis. Science (New York, N.Y.). 286: 2179-84. PMID 10591654 DOI: 10.1126/science.286.5447.2179  1
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