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Emmanuel Prestat, Ph.D - Publications

Laboratoire Ampère Ecole Centrale de Lyon, Université de Lyon, France 
Metagenomics, bioinformatics, prokaryotes

14 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Taş N, Prestat E, Wang S, Wu Y, Ulrich C, Kneafsey T, Tringe SG, Torn MS, Hubbard SS, Jansson JK. Landscape topography structures the soil microbiome in arctic polygonal tundra. Nature Communications. 9: 777. PMID 29472560 DOI: 10.1038/S41467-018-03089-Z  0.48
2015 Keravec M, Mounier J, Prestat E, Vallet S, Jansson JK, Burgaud G, Rosec S, Gouriou S, Rault G, Coton E, Barbier G, Héry-Arnaud G. Insights into the respiratory tract microbiota of patients with cystic fibrosis during early Pseudomonas aeruginosa colonization. Springerplus. 4: 405. PMID 26266076 DOI: 10.1186/S40064-015-1207-0  0.8
2015 Delmont TO, Eren AM, Maccario L, Prestat E, Esen ÖC, Pelletier E, Le Paslier D, Simonet P, Vogel TM. Reconstructing rare soil microbial genomes using in situ enrichments and metagenomics. Frontiers in Microbiology. 6: 358. PMID 25983722 DOI: 10.3389/Fmicb.2015.00358  0.8
2014 Prestat E, David MM, Hultman J, Ta? N, Lamendella R, Dvornik J, Mackelprang R, Myrold DD, Jumpponen A, Tringe SG, Holman E, Mavromatis K, Jansson JK. FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus. Nucleic Acids Research. 42: e145. PMID 25260589 DOI: 10.1093/Nar/Gku702  0.8
2014 Lamendella R, Strutt S, Borglin S, Chakraborty R, Tas N, Mason OU, Hultman J, Prestat E, Hazen TC, Jansson JK. Assessment of the Deepwater Horizon oil spill impact on Gulf coast microbial communities. Frontiers in Microbiology. 5: 130. PMID 24772107 DOI: 10.3389/Fmicb.2014.00130  0.8
2014 TaÅŸ N, Prestat E, McFarland JW, Wickland KP, Knight R, Berhe AA, Jorgenson T, Waldrop MP, Jansson JK. Impact of fire on active layer and permafrost microbial communities and metagenomes in an upland Alaskan boreal forest. The Isme Journal. 8: 1904-19. PMID 24722629 DOI: 10.1038/Ismej.2014.36  0.8
2014 David MM, Cecillon S, Warne BM, Prestat E, Jansson JK, Vogel TM. Microbial ecology of chlorinated solvent biodegradation. Environmental Microbiology. PMID 24517489 DOI: 10.1111/1462-2920.12413  0.8
2014 Mason OU, Scott NM, Gonzalez A, Robbins-Pianka A, Bælum J, Kimbrel J, Bouskill NJ, Prestat E, Borglin S, Joyner DC, Fortney JL, Jurelevicius D, Stringfellow WT, Alvarez-Cohen L, Hazen TC, et al. Metagenomics reveals sediment microbial community response to Deepwater Horizon oil spill. The Isme Journal. 8: 1464-75. PMID 24451203 DOI: 10.1038/Ismej.2013.254  0.8
2013 Larose C, Prestat E, Cecillon S, Berger S, Malandain C, Lyon D, Ferrari C, Schneider D, Dommergue A, Vogel TM. Interactions between snow chemistry, mercury inputs and microbial population dynamics in an Arctic snowpack. Plos One. 8: e79972. PMID 24282515 DOI: 10.1371/Journal.Pone.0079972  0.8
2013 Prestat E, de Morais SR, Vendrell JA, Thollet A, Gautier C, Cohen PA, Aussem A. Learning the local Bayesian network structure around the ZNF217 oncogene in breast tumours. Computers in Biology and Medicine. 43: 334-41. PMID 23375235 DOI: 10.1016/J.Compbiomed.2012.12.002  0.32
2012 Bælum J, Prestat E, David MM, Strobel BW, Jacobsen CS. Modeling of phenoxy acid herbicide mineralization and growth of microbial degraders in 15 soils monitored by quantitative real-time PCR of the functional tfdA gene. Applied and Environmental Microbiology. 78: 5305-12. PMID 22635998 DOI: 10.1128/Aem.00990-12  0.8
2012 Delmont TO, Prestat E, Keegan KP, Faubladier M, Robe P, Clark IM, Pelletier E, Hirsch PR, Meyer F, Gilbert JA, Le Paslier D, Simonet P, Vogel TM. Structure, fluctuation and magnitude of a natural grassland soil metagenome. The Isme Journal. 6: 1677-87. PMID 22297556 DOI: 10.1038/Ismej.2011.197  0.8
2011 Lombard N, Prestat E, van Elsas JD, Simonet P. Soil-specific limitations for access and analysis of soil microbial communities by metagenomics. Fems Microbiology Ecology. 78: 31-49. PMID 21631545 DOI: 10.1111/J.1574-6941.2011.01140.X  0.8
2011 Delmont TO, Malandain C, Prestat E, Larose C, Monier JM, Simonet P, Vogel TM. Metagenomic mining for microbiologists. The Isme Journal. 5: 1837-43. PMID 21593798 DOI: 10.1038/Ismej.2011.61  0.8
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