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Emmanuel Prestat, Ph.D - Publications

Affiliations: 
Laboratoire Ampère Ecole Centrale de Lyon, Université de Lyon, France 
Area:
Metagenomics, bioinformatics, prokaryotes
Website:
http://www.genomenviron.org/People/Prestat/Prestat.html

14/28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Taş N, Prestat E, Wang S, Wu Y, Ulrich C, Kneafsey T, Tringe SG, Torn MS, Hubbard SS, Jansson JK. Landscape topography structures the soil microbiome in arctic polygonal tundra. Nature Communications. 9: 777. PMID 29472560 DOI: 10.1038/S41467-018-03089-Z  0.48
2015 Keravec M, Mounier J, Prestat E, Vallet S, Jansson JK, Burgaud G, Rosec S, Gouriou S, Rault G, Coton E, Barbier G, Héry-Arnaud G. Insights into the respiratory tract microbiota of patients with cystic fibrosis during early Pseudomonas aeruginosa colonization. Springerplus. 4: 405. PMID 26266076 DOI: 10.1186/S40064-015-1207-0  0.8
2015 Delmont TO, Eren AM, Maccario L, Prestat E, Esen ÖC, Pelletier E, Le Paslier D, Simonet P, Vogel TM. Reconstructing rare soil microbial genomes using in situ enrichments and metagenomics. Frontiers in Microbiology. 6: 358. PMID 25983722 DOI: 10.3389/Fmicb.2015.00358  0.8
2014 Prestat E, David MM, Hultman J, Ta? N, Lamendella R, Dvornik J, Mackelprang R, Myrold DD, Jumpponen A, Tringe SG, Holman E, Mavromatis K, Jansson JK. FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus. Nucleic Acids Research. 42: e145. PMID 25260589 DOI: 10.1093/Nar/Gku702  0.8
2014 Lamendella R, Strutt S, Borglin S, Chakraborty R, Tas N, Mason OU, Hultman J, Prestat E, Hazen TC, Jansson JK. Assessment of the Deepwater Horizon oil spill impact on Gulf coast microbial communities. Frontiers in Microbiology. 5: 130. PMID 24772107 DOI: 10.3389/Fmicb.2014.00130  0.8
2014 TaÅŸ N, Prestat E, McFarland JW, Wickland KP, Knight R, Berhe AA, Jorgenson T, Waldrop MP, Jansson JK. Impact of fire on active layer and permafrost microbial communities and metagenomes in an upland Alaskan boreal forest. The Isme Journal. 8: 1904-19. PMID 24722629 DOI: 10.1038/Ismej.2014.36  0.8
2014 David MM, Cecillon S, Warne BM, Prestat E, Jansson JK, Vogel TM. Microbial ecology of chlorinated solvent biodegradation. Environmental Microbiology. PMID 24517489 DOI: 10.1111/1462-2920.12413  0.8
2014 Mason OU, Scott NM, Gonzalez A, Robbins-Pianka A, Bælum J, Kimbrel J, Bouskill NJ, Prestat E, Borglin S, Joyner DC, Fortney JL, Jurelevicius D, Stringfellow WT, Alvarez-Cohen L, Hazen TC, et al. Metagenomics reveals sediment microbial community response to Deepwater Horizon oil spill. The Isme Journal. 8: 1464-75. PMID 24451203 DOI: 10.1038/Ismej.2013.254  0.8
2013 Larose C, Prestat E, Cecillon S, Berger S, Malandain C, Lyon D, Ferrari C, Schneider D, Dommergue A, Vogel TM. Interactions between snow chemistry, mercury inputs and microbial population dynamics in an Arctic snowpack. Plos One. 8: e79972. PMID 24282515 DOI: 10.1371/Journal.Pone.0079972  0.8
2013 Prestat E, de Morais SR, Vendrell JA, Thollet A, Gautier C, Cohen PA, Aussem A. Learning the local Bayesian network structure around the ZNF217 oncogene in breast tumours. Computers in Biology and Medicine. 43: 334-41. PMID 23375235 DOI: 10.1016/J.Compbiomed.2012.12.002  0.32
2012 Bælum J, Prestat E, David MM, Strobel BW, Jacobsen CS. Modeling of phenoxy acid herbicide mineralization and growth of microbial degraders in 15 soils monitored by quantitative real-time PCR of the functional tfdA gene. Applied and Environmental Microbiology. 78: 5305-12. PMID 22635998 DOI: 10.1128/Aem.00990-12  0.8
2012 Delmont TO, Prestat E, Keegan KP, Faubladier M, Robe P, Clark IM, Pelletier E, Hirsch PR, Meyer F, Gilbert JA, Le Paslier D, Simonet P, Vogel TM. Structure, fluctuation and magnitude of a natural grassland soil metagenome. The Isme Journal. 6: 1677-87. PMID 22297556 DOI: 10.1038/Ismej.2011.197  0.8
2011 Lombard N, Prestat E, van Elsas JD, Simonet P. Soil-specific limitations for access and analysis of soil microbial communities by metagenomics. Fems Microbiology Ecology. 78: 31-49. PMID 21631545 DOI: 10.1111/J.1574-6941.2011.01140.X  0.8
2011 Delmont TO, Malandain C, Prestat E, Larose C, Monier JM, Simonet P, Vogel TM. Metagenomic mining for microbiologists. The Isme Journal. 5: 1837-43. PMID 21593798 DOI: 10.1038/Ismej.2011.61  0.8
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2021 Borderes M, Gasc C, Prestat E, Galvão Ferrarini M, Vinga S, Boucinha L, Sagot MF. A comprehensive evaluation of binning methods to recover human gut microbial species from a non-redundant reference gene catalog. Nar Genomics and Bioinformatics. 3: lqab009. PMID 33709074 DOI: 10.1093/nargab/lqab009  0.01
2017 Men Y, Yu K, Bælum J, Gao Y, Tremblay J, Prestat E, Stenuit B, Tringe SG, Jansson J, Zhang T, Alvarez-Cohen L. Metagenomic and metatranscriptomic analyses reveal structure and dynamics of a dechlorinating community containing Dehalococcoides mccartyi and corrinoid-providing microorganisms under cobalamin-limited condition. Applied and Environmental Microbiology. PMID 28188205 DOI: 10.1128/Aem.03508-16  0.01
2017 Mori I. Glass slide preparation and digital pathology Journal of Clinical & Experimental Pathology. 7. DOI: 10.4172/2161-0681-C1-043  0.01
2015 Cao Y, Mishchenko A, Yu GL, Khestanova E, Rooney AP, Prestat E, Kretinin AV, Blake P, Shalom MB, Woods C, Chapman J, Balakrishnan G, Grigorieva IV, Novoselov KS, Piot BA, et al. Quality Heterostructures from Two-Dimensional Crystals Unstable in Air by Their Assembly in Inert Atmosphere. Nano Letters. PMID 26132110 DOI: 10.1021/Acs.Nanolett.5B00648  0.01
2015 Dalmas De Réotier P, Prestat E, Bayle-Guillemaud P, Boukhari M, Barski A, Marty A, Jamet M, Suter A, Prokscha T, Salman Z, Morenzoni E, Yaouanc A. Core-shell nanostructure in a Ge0.9Mn0.1 film observed via structural and magnetic measurements Physical Review B - Condensed Matter and Materials Physics. 91. DOI: 10.1103/PhysRevB.91.245408  0.01
2014 Lewis EA, Slater TJ, Prestat E, Macedo A, O'Brien P, Camargo PH, Haigh SJ. Real-time imaging and elemental mapping of AgAu nanoparticle transformations. Nanoscale. 6: 13598-605. PMID 25271696 DOI: 10.1039/C4Nr04837G  0.01
2014 Prestat E, Porret C, Favre-Nicolin V, Tainoff D, Boukhari M, Bayle-Guillemaud P, Jamet M, Barski A. Investigations of segregation phenomena in highly strained Mn-doped Ge wetting layers and Ge quantum dots embedded in silicon Applied Physics Letters. 104. DOI: 10.1063/1.4867651  0.01
2013 Rouvière JL, Prestat E, Bayle-Guillemaud P, Den Hertog M, Bougerol C, Cooper D, Zuo J. Advanced semiconductor characterization with aberration corrected electron microscopes Journal of Physics: Conference Series. 471. DOI: 10.1088/1742-6596/471/1/012001  0.01
2013 Prestat E, Barski A, Bellet-Amalric E, Jacquot JF, Morel R, Tainoff D, Jain A, Porret C, Bayle-Guillemaud P, Jamet M. Structure and magnetism in strainem Ge1-x-ySnxMn y films grown on Ge(001) by low temperature molecular beam epitaxy Applied Physics Letters. 103. DOI: 10.1063/1.4813117  0.01
2013 Prestat E, Popescu R, Blank H, Schneider R, Gerthsen D. Coarsening of Pt nanoparticles on amorphous carbon film Surface Science. 609: 195-202. DOI: 10.1016/j.susc.2012.12.014  0.01
2012 Jain A, Rojas-Sanchez JC, Cubukcu M, Peiro J, Le Breton JC, Prestat E, Vergnaud C, Louahadj L, Portemont C, Ducruet C, Baltz V, Barski A, Bayle-Guillemaud P, Vila L, Attané JP, et al. Crossover from spin accumulation into interface states to spin injection in the germanium conduction band. Physical Review Letters. 109: 106603. PMID 23005314 DOI: 10.1103/Physrevlett.109.106603  0.01
2012 Laureti S, Suck SY, Haas H, Prestat E, Bourgeois O, Givord D. Size dependence of exchange bias in Co/CoO nanostructures. Physical Review Letters. 108: 077205. PMID 22401249 DOI: 10.1103/PhysRevLett.108.077205  0.01
2012 Mouton I, Lardé R, Talbot E, Cadel E, Genevois C, Blavette D, Baltz V, Prestat E, Bayle-Guillemaud P, Barski A, Jamet M. Composition and morphology of self-organized Mn-rich nanocolumns embedded in Ge: Correlation with the magnetic properties Journal of Applied Physics. 112. DOI: 10.1063/1.4768723  0.01
2012 Jain A, Vergnaud C, Peiro J, Le Breton JC, Prestat E, Louahadj L, Portemont C, Ducruet C, Baltz V, Marty A, Barski A, Bayle-Guillemaud P, Vila L, Attané JP, Augendre E, et al. Electrical and thermal spin accumulation in germanium Applied Physics Letters. 101. DOI: 10.1063/1.4733620  0.01
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