Aravinda Chakravarti, Ph.D. - Publications

Affiliations: 
McKusick-Nathans Institute of Genetic Medicine Johns Hopkins University School of Medicine, Baltimore, MD, United States 
Area:
Human genetics
Website:
http://chakravarti.igm.jhmi.edu/

149 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Wang Y, Jiang Q, Chakravarti A, Cai H, Xu Z, Wu W, Gu B, Li L, Cai W. MicroRNA-4516-mediated regulation of relies on 3' UTR -acting variants and contributes to the altered risk of Hirschsprung disease. Journal of Medical Genetics. PMID 32066630 DOI: 10.1136/jmedgenet-2019-106615  0.48
2019 Jiang Q, Wang Y, Li Q, Zhang Z, Xiao P, Wang H, Liu N, Wu J, Zhang F, Chakravarti A, Cai W, Li L. Sequence characterization of RET in 117 Chinese Hirschsprung disease families identifies a large burden of de novo and parental mosaic mutations. Orphanet Journal of Rare Diseases. 14: 237. PMID 31666091 DOI: 10.1186/s13023-019-1194-2  0.48
2019 Kapoor A, Lee D, Zhu L, Soliman EZ, Grove ML, Boerwinkle E, Arking DE, Chakravarti A. Multiple variant enhancers modulate its cardiac gene expression and the QT interval. Proceedings of the National Academy of Sciences of the United States of America. PMID 31068470 DOI: 10.1073/pnas.1808734116  0.4
2019 Tilghman JM, Ling AY, Turner TN, Sosa MX, Krumm N, Chatterjee S, Kapoor A, Coe BP, Nguyen KH, Gupta N, Gabriel S, Eichler EE, Berrios C, Chakravarti A. Molecular Genetic Anatomy and Risk Profile of Hirschsprung's Disease. The New England Journal of Medicine. 380: 1421-1432. PMID 30970187 DOI: 10.1056/NEJMoa1706594  0.4
2018 Ashar FN, Mitchell RN, Albert CM, Newton-Cheh C, Brody JA, Müller-Nurasyid M, Moes A, Meitinger T, Mak A, Huikuri H, Junttila MJ, Goyette P, Pulit SL, Pazoki R, Tanck MW, ... ... Chakravarti A, et al. A comprehensive evaluation of the genetic architecture of sudden cardiac arrest. European Heart Journal. PMID 30169657 DOI: 10.1093/eurheartj/ehy474  0.44
2018 Lee D, Kapoor A, Safi A, Song L, Halushka MK, Crawford GE, Chakravarti A. Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants. Genome Research. PMID 30139769 DOI: 10.1101/gr.234633.118  0.44
2018 Feitosa MF, Kraja AT, Chasman DI, Sung YJ, Winkler TW, Ntalla I, Guo X, Franceschini N, Cheng CY, Sim X, Vojinovic D, Marten J, Musani SK, Li C, Bentley AR, ... ... Chakravarti A, et al. Novel genetic associations for blood pressure identified via gene-alcohol interaction in up to 570K individuals across multiple ancestries. Plos One. 13: e0198166. PMID 29912962 DOI: 10.1371/journal.pone.0198166  0.56
2018 Wang TY, Lee D, Fox-Talbot K, Arking DE, Chakravarti A, Halushka MK. Cardiomyocytes have mosaic patterns of protein expression. Cardiovascular Pathology : the Official Journal of the Society For Cardiovascular Pathology. 34: 50-57. PMID 29677652 DOI: 10.1016/j.carpath.2018.03.002  0.44
2018 Jiang Q, Chen X, Zhang F, Chakravarti A, Li L. Response to Brosens et al. Genetics in Medicine : Official Journal of the American College of Medical Genetics. PMID 29493585 DOI: 10.1038/gim.2018.7  0.48
2018 Sung YJ, Winkler TW, de Las Fuentes L, Bentley AR, Brown MR, Kraja AT, Schwander K, Ntalla I, Guo X, Franceschini N, Lu Y, Cheng CY, Sim X, Vojinovic D, Marten J, ... ... Chakravarti A, et al. A Large-Scale Multi-ancestry Genome-wide Study Accounting for Smoking Behavior Identifies Multiple Significant Loci for Blood Pressure. American Journal of Human Genetics. PMID 29455858 DOI: 10.1016/j.ajhg.2018.01.015  0.56
2017 Jiang Q, Liu F, Miao C, Li Q, Zhang Z, Xiao P, Su L, Yu K, Chen X, Zhang F, Chakravarti A, Li L. RET somatic mutations are underrecognized in Hirschsprung disease. Genetics in Medicine : Official Journal of the American College of Medical Genetics. PMID 29261189 DOI: 10.1038/gim.2017.178  0.48
2017 Kapoor A, Auer DR, Lee D, Chatterjee S, Chakravarti A. Testing the Ret and Sema3d genetic interaction in mouse enteric nervous system development. Human Molecular Genetics. PMID 28334784 DOI: 10.1093/hmg/ddx084  0.4
2016 Franceschini N, Carty CL, Lu Y, Tao R, Sung YJ, Manichaikul A, Haessler J, Fornage M, Schwander K, Zubair N, Bien S, Hindorff LA, Guo X, Bielinski SJ, Ehret G, ... ... Chakravarti A, et al. Variant Discovery and Fine Mapping of Genetic Loci Associated with Blood Pressure Traits in Hispanics and African Americans. Plos One. 11: e0164132. PMID 27736895 DOI: 10.1371/journal.pone.0164132  0.72
2016 Tang CS, Gui H, Kapoor A, Kim JH, Luzón-Toro B, Pelet A, Burzynski G, Lantieri F, So MT, Berrios C, Shin HD, Fernández RM, Le TL, Verheij JB, Matera I, ... ... Chakravarti A, et al. Trans-ethnic meta-analysis of genome-wide association studies for Hirschsprung disease. Human Molecular Genetics. PMID 27702942 DOI: 10.1093/hmg/ddw333  0.4
2016 Chatterjee S, Kapoor A, Akiyama JA, Auer DR, Lee D, Gabriel S, Berrios C, Pennacchio LA, Chakravarti A. Enhancer Variants Synergistically Drive Dysfunction of a Gene Regulatory Network In Hirschsprung Disease. Cell. 167: 355-368.e10. PMID 27693352 DOI: 10.1016/j.cell.2016.09.005  0.4
2016 van der Harst P, van Setten J, Verweij N, Vogler G, Franke L, Maurano MT, Wang X, Mateo Leach I, Eijgelsheim M, Sotoodehnia N, Hayward C, Sorice R, Meirelles O, Lyytikäinen LP, Polašek O, ... ... Chakravarti A, et al. 52 Genetic Loci Influencing Myocardial Mass. Journal of the American College of Cardiology. 68: 1435-48. PMID 27659466 DOI: 10.1016/j.jacc.2016.07.729  0.72
2016 Liu C, Kraja AT, Smith JA, Brody JA, Franceschini N, Bis JC, Rice K, Morrison AC, Lu Y, Weiss S, Guo X, Palmas W, Martin LW, Chen YI, Surendran P, ... ... Chakravarti A, et al. Meta-analysis identifies common and rare variants influencing blood pressure and overlapping with metabolic trait loci. Nature Genetics. PMID 27618448 DOI: 10.1038/ng.3660  0.72
2016 Kapoor A, Bakshy K, Xu L, Nandakumar P, Lee D, Boerwinkle E, Grove ML, Arking DE, Chakravarti A. Rare coding TTN variants are associated with electrocardiographic QT interval in the general population. Scientific Reports. 6: 28356. PMID 27321809 DOI: 10.1038/srep28356  0.72
2016 Boeke JD, Church G, Hessel A, Kelley NJ, Arkin A, Cai Y, Carlson R, Chakravarti A, Cornish VW, Holt L, Isaacs FJ, Kuiken T, Lajoie M, Lessor T, Lunshof J, et al. The Genome Project-Write. Science (New York, N.Y.). PMID 27256881 DOI: 10.1126/science.aaf6850  0.72
2016 Chakravarti A, Turner TN. Revealing rate-limiting steps in complex disease biology: The crucial importance of studying rare, extreme-phenotype families. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. PMID 27062178 DOI: 10.1002/bies.201500203  0.72
2016 Malhotra R, Urs AB, Chakravarti A, Kumar S, Gupta VK, Mahajan B. Correlation of Cyfra 21-1 levels in saliva and serum with CK19 mRNA expression in oral squamous cell carcinoma. Tumour Biology : the Journal of the International Society For Oncodevelopmental Biology and Medicine. PMID 26779624 DOI: 10.1007/s13277-016-4809-4  0.36
2015 Yu B, Pulit SL, Hwang SJ, Brody JA, Amin N, Auer PL, Bis JC, Boerwinkle E, Burke GL, Chakravarti A, Correa A, Dreisbach AW, Franco OH, Ehret GB, Franceschini N, et al. Rare Exome Sequence Variants in CLCN6 Reduce Blood Pressure Levels and Hypertension Risk. Circulation. Cardiovascular Genetics. PMID 26658788 DOI: 10.1161/CIRCGENETICS.115.001215  0.72
2015 Khayat M, Tilghman JM, Chervinsky I, Zalman L, Chakravarti A, Shalev SA. A PIGN mutation responsible for multiple congenital anomalies-hypotonia-seizures syndrome 1 (MCAHS1) in an Israeli-Arab family. American Journal of Medical Genetics. Part A. PMID 26364997 DOI: 10.1002/ajmg.a.37375  0.72
2015 Chakravarti A. Perspectives on Human Variation through the Lens of Diversity and Race. Cold Spring Harbor Perspectives in Biology. 7: a023358. PMID 26330522 DOI: 10.1101/cshperspect.a023358  0.72
2015 Turner TN, Douville C, Kim D, Stenson PD, Cooper DN, Chakravarti A, Karchin R. Proteins linked to autosomal dominant and autosomal recessive disorders harbor characteristic rare missense mutation distribution patterns. Human Molecular Genetics. 24: 5995-6002. PMID 26246501 DOI: 10.1093/hmg/ddv309  0.72
2015 Cornish TC, Chakravarti A, Kapoor A, Halushka MK. HPASubC: A suite of tools for user subclassification of human protein atlas tissue images. Journal of Pathology Informatics. 6: 36. PMID 26167380 DOI: 10.4103/2153-3539.159213  0.44
2015 Salfati E, Morrison AC, Boerwinkle E, Chakravarti A. Direct Estimates of the Genomic Contributions to Blood Pressure Heritability within a Population-Based Cohort (ARIC). Plos One. 10: e0133031. PMID 26162070 DOI: 10.1371/journal.pone.0133031  0.72
2015 Manolio TA, Abramowicz M, Al-Mulla F, Anderson W, Balling R, Berger AC, Bleyl S, Chakravarti A, Chantratita W, Chisholm RL, W Dissanayake VH, Dunn M, Dzau VJ, Han BG, Hubbard T, et al. Global implementation of genomic medicine: We are not alone. Science Translational Medicine. 7: 290ps13. PMID 26041702 DOI: 10.1126/scitranslmed.aab0194  0.72
2015 Chakravarti A, Roy P, Ashraf A, Siddiqui O. Trends in the epidemiology of hepatitis B virus infection at a tertiary care hospital: A 10-year retrospective analysis. Indian Journal of Gastroenterology : Official Journal of the Indian Society of Gastroenterology. 34: 189-90. PMID 25902954 DOI: 10.1007/s12664-015-0548-5  0.36
2015 Jiang Q, Arnold S, Heanue T, Kilambi KP, Doan B, Kapoor A, Ling AY, Sosa MX, Guy M, Jiang Q, Burzynski G, West K, Bessling S, Griseri P, Amiel J, ... ... Chakravarti A, et al. Functional loss of semaphorin 3C and/or semaphorin 3D and their epistatic interaction with ret are critical to Hirschsprung disease liability. American Journal of Human Genetics. 96: 581-96. PMID 25839327 DOI: 10.1016/j.ajhg.2015.02.014  0.72
2015 Turner TN, Sharma K, Oh EC, Liu YP, Collins RL, Sosa MX, Auer DR, Brand H, Sanders SJ, Moreno-De-Luca D, Pihur V, Plona T, Pike K, Soppet DR, Smith MW, ... ... Chakravarti A, et al. Loss of δ-catenin function in severe autism. Nature. 520: 51-6. PMID 25807484 DOI: 10.1038/nature14186  0.72
2015 Karra VK, Gumma PK, Chowdhury SJ, Ruttala R, Polipalli SK, Chakravarti A, Kar P. IL-18 polymorphisms in hepatitis B virus related liver disease. Cytokine. 73: 277-82. PMID 25802197 DOI: 10.1016/j.cyto.2015.02.015  0.36
2015 Sung YJ, Basson J, Cheng N, Nguyen KD, Nandakumar P, Hunt SC, Arnett DK, Dávila-Román VG, Rao DC, Chakravarti A. The role of rare variants in systolic blood pressure: analysis of ExomeChip data in HyperGEN African Americans. Human Heredity. 79: 20-7. PMID 25765051 DOI: 10.1159/000375373  0.72
2015 Kapoor A, Jiang Q, Chatterjee S, Chakraborty P, Sosa MX, Berrios C, Chakravarti A. Population variation in total genetic risk of Hirschsprung disease from common RET, SEMA3 and NRG1 susceptibility polymorphisms. Human Molecular Genetics. 24: 2997-3003. PMID 25666438 DOI: 10.1093/hmg/ddv051  0.72
2015 Bharara T, Bhalla P, Rawat D, Garg VK, Sardana K, Chakravarti A. Rising trend of antimicrobial resistance among Neisseria gonorrhoeae isolates and the emergence of N. gonorrhoeae isolate with decreased susceptibility to ceftriaxone. Indian Journal of Medical Microbiology. 33: 39-42. PMID 25560000 DOI: 10.4103/0255-0857.148374  0.36
2015 Auton A, Abecasis GR, Altshuler DM, Durbin RM, Bentley DR, Chakravarti A, Clark AG, Donnelly P, Eichler EE, Flicek P, Gabriel SB, Gibbs RA, Green ED, Hurles ME, Knoppers BM, et al. A global reference for human genetic variation Nature. 526: 68-74. DOI: 10.1038/nature15393  0.72
2015 Chong JX, Buckingham KJ, Jhangiani SN, Boehm C, Sobreira N, Smith JD, Harrell TM, McMillin MJ, Wiszniewski W, Gambin T, CobanAkdemir ZH, Doheny K, Scott AF, Avramopoulos D, Chakravarti A, et al. The Genetic Basis of Mendelian Phenotypes: Discoveries, Challenges, and Opportunities American Journal of Human Genetics. DOI: 10.1016/j.ajhg.2015.06.009  0.72
2014 Gunadi, Kapoor A, Ling AY, Rochadi, Makhmudi A, Herini ES, Sosa MX, Chatterjee S, Chakravarti A. Effects of RET and NRG1 polymorphisms in Indonesian patients with Hirschsprung disease. Journal of Pediatric Surgery. 49: 1614-8. PMID 25475805 DOI: 10.1016/j.jpedsurg.2014.04.011  0.72
2014 Chakravarti A. Profile of Mary-Claire King, 2014 Lasker-Koshland Special Achievement in Medical Science awardee. Proceedings of the National Academy of Sciences of the United States of America. 111: 17690-2. PMID 25425662 DOI: 10.1073/pnas.1418785111  0.72
2014 Morrison AC, Bis JC, Hwang SJ, Ehret GB, Lumley T, Rice K, Muzny D, Gibbs RA, Boerwinkle E, Psaty BM, Chakravarti A, Levy D. Sequence analysis of six blood pressure candidate regions in 4,178 individuals: the Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) targeted sequencing study. Plos One. 9: e109155. PMID 25275628 DOI: 10.1371/journal.pone.0109155  0.72
2014 Chakravarti A, Roy P. Comments on 'Current emerging situation of dengue in India': with regard to the clinical and laboratory characteristics of paediatric dengue in India. Tropical Doctor. 44: 246-7. PMID 25096277 DOI: 10.1177/0049475514543942  0.36
2014 Scharpf RB, Mireles L, Yang Q, Köttgen A, Ruczinski I, Susztak K, Halper-Stromberg E, Tin A, Cristiano S, Chakravarti A, Boerwinkle E, Fox CS, Coresh J, Linda Kao WH. Copy number polymorphisms near SLC2A9 are associated with serum uric acid concentrations. Bmc Genetics. 15: 81. PMID 25007794 DOI: 10.1186/1471-2156-15-81  0.72
2014 Ganesh SK, Chasman DI, Larson MG, Guo X, Verwoert G, Bis JC, Gu X, Smith AV, Yang ML, Zhang Y, Ehret G, Rose LM, Hwang SJ, Papanicolau GJ, Sijbrands EJ, ... ... Chakravarti A, et al. Effects of long-term averaging of quantitative blood pressure traits on the detection of genetic associations. American Journal of Human Genetics. 95: 49-65. PMID 24975945 DOI: 10.1016/j.ajhg.2014.06.002  0.72
2014 Kapoor A, Sekar RB, Hansen NF, Fox-Talbot K, Morley M, Pihur V, Chatterjee S, Brandimarto J, Moravec CS, Pulit SL, Pfeufer A, Mullikin J, Ross M, Green ED, ... ... Chakravarti A, et al. An enhancer polymorphism at the cardiomyocyte intercalated disc protein NOS1AP locus is a major regulator of the QT interval. American Journal of Human Genetics. 94: 854-69. PMID 24857694 DOI: 10.1016/j.ajhg.2014.05.001  0.72
2014 Simino J, Kume R, Kraja AT, Turner ST, Hanis CL, Sheu WH, Chen YD, Jaquish CE, Cooper RS, Chakravarti A, Quertermous T, Boerwinkle E, Hunt SC, Rao DC. Linkage analysis incorporating gene-age interactions identifies seven novel lipid loci: the Family Blood Pressure Program. Atherosclerosis. 235: 84-93. PMID 24819747 DOI: 10.1016/j.atherosclerosis.2014.04.008  0.72
2014 Ghosh R, Uppal B, Aggarwal P, Chakravarti A, Jha AK, Dubey AP. A comparative study of conventional and molecular techniques in diagnosis of campylobacter gastroenteritis in children. Annals of Clinical and Laboratory Science. 44: 42-8. PMID 24695473  0.36
2014 Chakravarti A. 2013 William Allan Award: My multifactorial journey. American Journal of Human Genetics. 94: 326-33. PMID 24607382 DOI: 10.1016/j.ajhg.2013.11.014  0.72
2014 Auer DR, Sysa-Shah P, Bedja D, Simmers JL, Pak E, Dutra A, Cohn R, Gabrielson KL, Chakravarti A, Kapoor A. Generation of a cre recombinase-conditional Nos1ap over-expression transgenic mouse. Biotechnology Letters. 36: 1179-85. PMID 24563304 DOI: 10.1007/s10529-014-1473-x  0.72
2014 Lemaitre RN, Johnson CO, Hesselson S, Sotoodehnia N, Sotoodhenia N, McKnight B, Sitlani CM, Rea TD, King IB, Kwok PY, Mak A, Li G, Brody J, Larson E, Mozaffarian D, ... ... Chakravarti A, et al. Common variation in fatty acid metabolic genes and risk of incident sudden cardiac arrest. Heart Rhythm : the Official Journal of the Heart Rhythm Society. 11: 471-7. PMID 24418166 DOI: 10.1016/j.hrthm.2014.01.008  0.72
2014 Matteini AM, Li J, Lange EM, Tanaka T, Lange LA, Tracy RP, Wang Y, Biggs ML, Arking DE, Fallin MD, Chakravarti A, Psaty BM, Bandinelli S, Ferrucci L, Reiner AP, et al. Novel gene variants predict serum levels of the cytokines IL-18 and IL-1ra in older adults. Cytokine. 65: 10-6. PMID 24182552 DOI: 10.1016/j.cyto.2013.10.002  0.72
2013 Chakravarti A, Sharma A, Matlani M. Routine Screening for Rubella and CMV Antibodies During Pregnancy: Is it Justifiable? Journal of Obstetrics and Gynaecology of India. 63: 378-82. PMID 24431683 DOI: 10.1007/s13224-013-0422-2  0.36
2013 Chadha S, Bhalla P, Gautam H, Chakravarti A, Saini S, Anuradha S, Dewan R. Utility of Serum Neopterin and Serum IL-2 Receptor Levels to Predict Absolute CD4 T Lymphocyte Count in HIV Infected Cases. Interdisciplinary Perspectives On Infectious Diseases. 2013: 143648. PMID 24381590 DOI: 10.1155/2013/143648  0.36
2013 Ganesh SK, Arnett DK, Assimes TL, Assimes TL, Basson CT, Chakravarti A, Ellinor PT, Engler MB, Goldmuntz E, Herrington DM, Hershberger RE, Hong Y, Johnson JA, Kittner SJ, McDermott DA, et al. Genetics and genomics for the prevention and treatment of cardiovascular disease: update: a scientific statement from the American Heart Association. Circulation. 128: 2813-51. PMID 24297835 DOI: 10.1161/01.cir.0000437913.98912.1d  0.72
2013 Fernández RM, Bleda M, Luzón-Toro B, García-Alonso L, Arnold S, Sribudiani Y, Besmond C, Lantieri F, Doan B, Ceccherini I, Lyonnet S, Hofstra RM, Chakravarti A, Antiñolo G, Dopazo J, et al. Pathways systematically associated to Hirschsprung's disease. Orphanet Journal of Rare Diseases. 8: 187. PMID 24289864 DOI: 10.1186/1750-1172-8-187  0.72
2013 Sampath S, Bhat S, Gupta S, O'Connor A, West AB, Arking DE, Chakravarti A. Defining the contribution of CNTNAP2 to autism susceptibility. Plos One. 8: e77906. PMID 24147096 DOI: 10.1371/journal.pone.0077906  0.72
2013 Prasad MK, Bhalla K, Pan ZH, O'Connell JR, Weder AB, Chakravarti A, Tian B, Chang YP. A polymorphic 3'UTR element in ATP1B1 regulates alternative polyadenylation and is associated with blood pressure. Plos One. 8: e76290. PMID 24098465 DOI: 10.1371/journal.pone.0076290  0.72
2013 Chakravarti A, Clark AG, Mootha VK. Distilling pathophysiology from complex disease genetics. Cell. 155: 21-6. PMID 24074858 DOI: 10.1016/j.cell.2013.09.001  0.72
2013 Chakravarti A, Ashraf A, Malik S. A study of changing trends of prevalence and genotypic distribution of hepatitis C virus among high risk groups in North India. Indian Journal of Medical Microbiology. 31: 354-9. PMID 24064641 DOI: 10.4103/0255-0857.118877  0.36
2013 Lee SH, Ripke S, Neale BM, Faraone SV, Purcell SM, Perlis RH, Mowry BJ, Thapar A, Goddard ME, Witte JS, Absher D, Agartz I, Akil H, Amin F, ... ... Chakravarti A, et al. Genetic relationship between five psychiatric disorders estimated from genome-wide SNPs. Nature Genetics. 45: 984-94. PMID 23933821 DOI: 10.1038/ng.2711  0.72
2013 Mantan M, Pandharikar N, Yadav S, Chakravarti A, Sethi GR. Seroprotection for hepatitis B in children with nephrotic syndrome. Pediatric Nephrology (Berlin, Germany). 28: 2125-30. PMID 23800800 DOI: 10.1007/s00467-013-2538-0  0.36
2013 Alves MM, Sribudiani Y, Brouwer RW, Amiel J, Antiñolo G, Borrego S, Ceccherini I, Chakravarti A, Fernández RM, Garcia-Barcelo MM, Griseri P, Lyonnet S, Tam PK, van Ijcken WF, Eggen BJ, et al. Contribution of rare and common variants determine complex diseases-Hirschsprung disease as a model. Developmental Biology. 382: 320-9. PMID 23707863 DOI: 10.1016/j.ydbio.2013.05.019  0.72
2013 Chakravarti A, Siddiqui O, Malik S, Uppal B. Use of dried blood blotted on filter paper to detect dengue IgM antibody and dengue NS1 antigen. The Southeast Asian Journal of Tropical Medicine and Public Health. 44: 226-31. PMID 23691632  0.36
2013 Jannot AS, Pelet A, Henrion-Caude A, Chaoui A, Masse-Morel M, Arnold S, Sanlaville D, Ceccherini I, Borrego S, Hofstra RM, Munnich A, Bondurand N, Chakravarti A, Clerget-Darpoux F, Amiel J, et al. Chromosome 21 scan in Down syndrome reveals DSCAM as a predisposing locus in Hirschsprung disease. Plos One. 8: e62519. PMID 23671607 DOI: 10.1371/journal.pone.0062519  0.72
2013 Chakravarti A, Chauhan MS, Dogra G, Banerjee S. Hepatitis C virus core antigen assay: can we think beyond convention in resource limited settings? The Brazilian Journal of Infectious Diseases : An Official Publication of the Brazilian Society of Infectious Diseases. 17: 369-74. PMID 23602467 DOI: 10.1016/j.bjid.2012.10.028  0.36
2013 Wu Y, Waite LL, Jackson AU, Sheu WH, Buyske S, Absher D, Arnett DK, Boerwinkle E, Bonnycastle LL, Carty CL, Cheng I, Cochran B, Croteau-Chonka DC, Dumitrescu L, Eaton CB, ... ... Chakravarti A, et al. Trans-ethnic fine-mapping of lipid loci identifies population-specific signals and allelic heterogeneity that increases the trait variance explained. Plos Genetics. 9: e1003379. PMID 23555291 DOI: 10.1371/journal.pgen.1003379  0.72
2013 Ghosh R, Uppal B, Aggarwal P, Chakravarti A, Jha AK. Increasing antimicrobial resistance of campylobacter jejuni isolated from paediatric diarrhea cases in a tertiary care hospital of new delhi, India. Journal of Clinical and Diagnostic Research : Jcdr. 7: 247-9. PMID 23543776 DOI: 10.7860/JCDR/2013/5267.2738  0.36
2013 Shah SA, Herrington DM, Howard TD, Divers J, Arnett DK, Burke GL, Kao WH, Guo X, Siscovick DS, Chakravarti A, Lima JA, Psaty BM, Tomaselli GF, Rich SS, Bowden DW, et al. Associations between NOS1AP single nucleotide polymorphisms (SNPs) and QT interval duration in four racial/ethnic groups in the Multi-Ethnic Study of Atherosclerosis (MESA). Annals of Noninvasive Electrocardiology : the Official Journal of the International Society For Holter and Noninvasive Electrocardiology, Inc. 18: 29-40. PMID 23347024 DOI: 10.1111/anec.12028  0.72
2013 Crosslin DR, McDavid A, Weston N, Zheng X, Hart E, de Andrade M, Kullo IJ, McCarty CA, Doheny KF, Pugh E, Kho A, Hayes MG, Ritchie MD, Saip A, Crawford DC, ... ... Chakravarti A, et al. Genetic variation associated with circulating monocyte count in the eMERGE Network. Human Molecular Genetics. 22: 2119-27. PMID 23314186 DOI: 10.1093/hmg/ddt010  0.72
2013 Ganesh SK, Tragante V, Guo W, Guo Y, Lanktree MB, Smith EN, Johnson T, Castillo BA, Barnard J, Baumert J, Chang YP, Elbers CC, Farrall M, Fischer ME, Franceschini N, ... ... Chakravarti A, et al. Loci influencing blood pressure identified using a cardiovascular gene-centric array. Human Molecular Genetics. 22: 1663-78. PMID 23303523 DOI: 10.1093/hmg/dds555  0.72
2013 Nguyen KD, Pihur V, Ganesh SK, Rakha A, Cooper RS, Hunt SC, Freedman BI, Coresh J, Kao WH, Morrison AC, Boerwinkle E, Ehret GB, Chakravarti A. Effects of rare and common blood pressure gene variants on essential hypertension: results from the Family Blood Pressure Program, CLUE, and Atherosclerosis Risk in Communities studies. Circulation Research. 112: 318-26. PMID 23149595 DOI: 10.1161/CIRCRESAHA.112.276725  0.72
2013 Chakravarti A, Chauhan MS, Kumar S, Ashraf A. Genotypic characterization of dengue virus strains circulating during 2007-2009 in New Delhi. Archives of Virology. 158: 571-81. PMID 23129129 DOI: 10.1007/s00705-012-1522-5  0.36
2013 Chakravarti A. Genetic studies in isolated populations: Victor McKusick's contributions to population genetics Victor McKusick and the History of Medical Genetics. 2147483647: 107-117. DOI: 10.1007/978-1-4614-1677-7_12  0.72
2012 Chakravarti A, Suresh K, Neha, Shweta, Malik S. Dengue outbreak in Delhi in 2009: study of laboratory and clinical parameters. The Journal of Communicable Diseases. 44: 163-8. PMID 25145064  0.36
2012 Sosa MX, Sivakumar IK, Maragh S, Veeramachaneni V, Hariharan R, Parulekar M, Fredrikson KM, Harkins TT, Lin J, Feldman AB, Tata P, Ehret GB, Chakravarti A. Next-generation sequencing of human mitochondrial reference genomes uncovers high heteroplasmy frequency. Plos Computational Biology. 8: e1002737. PMID 23133345 DOI: 10.1371/journal.pcbi.1002737  0.72
2012 Abecasis GR, Auton A, Brooks LD, DePristo MA, Durbin RM, Handsaker RE, Kang HM, Marth GT, McVean GA. An integrated map of genetic variation from 1,092 human genomes. Nature. 491: 56-65. PMID 23128226 DOI: 10.1038/nature11632  0.72
2012 Chakravarti A, Matlani M, Kashyap B, Kumar A. Awareness of changing trends in epidemiology of dengue fever is essential for epidemiological surveillance. Indian Journal of Medical Microbiology. 30: 222-6. PMID 22664443 DOI: 10.4103/0255-0857.96699  0.36
2012 Ellinor PT, Lunetta KL, Albert CM, Glazer NL, Ritchie MD, Smith AV, Arking DE, Müller-Nurasyid M, Krijthe BP, Lubitz SA, Bis JC, Chung MK, Dörr M, Ozaki K, Roberts JD, ... ... Chakravarti A, et al. Meta-analysis identifies six new susceptibility loci for atrial fibrillation. Nature Genetics. 44: 670-5. PMID 22544366 DOI: 10.1038/ng.2261  0.72
2012 Chakravarti A. 2011 introduction to Curt Stern Award. American Journal of Human Genetics. 90: 405-6. PMID 22405085 DOI: 10.1016/j.ajhg.2012.02.015  0.72
2012 Jannot AS, Amiel J, Pelet A, Lantieri F, Fernandez RM, Verheij JB, Garcia-Barcelo M, Arnold S, Ceccherini I, Borrego S, Hofstra RM, Tam PK, Munnich A, Chakravarti A, Clerget-Darpoux F, et al. Male and female differential reproductive rate could explain parental transmission asymmetry of mutation origin in Hirschsprung disease. European Journal of Human Genetics : Ejhg. 20: 917-20. PMID 22395866 DOI: 10.1038/ejhg.2012.35  0.72
2012 Chakravarti A, Kapoor A. Genetics. Mendelian puzzles. Science (New York, N.Y.). 335: 930-1. PMID 22362999 DOI: 10.1126/science.1219301  0.72
2012 Chakravarti A, Arora R, Luxemburger C. Fifty years of dengue in India Transactions of the Royal Society of Tropical Medicine and Hygiene. 106: 273-282. PMID 22357401 DOI: 10.1016/j.trstmh.2011.12.007  0.36
2012 Jiang Q, Turner T, Sosa MX, Rakha A, Arnold S, Chakravarti A. Rapid and efficient human mutation detection using a bench-top next-generation DNA sequencer. Human Mutation. 33: 281-9. PMID 21898659 DOI: 10.1002/humu.21602  0.72
2012 Amin N, Byrne E, Johnson J, Chenevix-Trench G, Walter S, Nolte IM, Vink JM, Rawal R, Mangino M, Teumer A, Keers JC, Verwoert G, Baumeister S, Biffar R, ... ... Chakravarti A, et al. Genome-wide association analysis of coffee drinking suggests association with CYP1A1/CYP1A2 and NRCAM. Molecular Psychiatry. 17: 1116-29. PMID 21876539 DOI: 10.1038/mp.2011.101  0.72
2012 Chakravarti A, Kapoor A. Genetics and genomics in cardiovascular gene discovery Muscle. 1: 231-259. DOI: 10.1016/B978-0-12-381510-1.00018-1  0.72
2012 Chakravarti A, Dogra G, Verma V, Srivastava AP. RE: HCV genotypes distribution pattern in India Indian Journal of Medical Research. 136: 307-308.  0.36
2011 Chakravarti A, Malik S, Tiwari S, Ashraf A. A study of chikungunya outbreak in Delhi Journal of Communicable Diseases. 43: 259-263. PMID 23781642  0.36
2011 Won JH, Ehret G, Chakravarti A, Olshen RA. SNPs and other features as they predispose to complex disease: genome-wide predictive analysis of a quantitative phenotype for hypertension. Plos One. 6: e27891. PMID 22140480 DOI: 10.1371/journal.pone.0027891  0.72
2011 Chakravarti A. Widespread promiscuous genetic information transfer from DNA to RNA. Circulation Research. 109: 1202-3. PMID 22076505 DOI: 10.1161/RES.0b013e31823c4992  0.72
2011 Turner T, Pihur V, Chakravarti A. Quantifying and modeling birth order effects in autism. Plos One. 6: e26418. PMID 22039484 DOI: 10.1371/journal.pone.0026418  0.72
2011 Chakravarti A. Genomics is not enough. Science (New York, N.Y.). 334: 15. PMID 21980079 DOI: 10.1126/science.1214458  0.72
2011 Benke KS, Carlson MC, Doan BQ, Walston JD, Xue QL, Reiner AP, Fried LP, Arking DE, Chakravarti A, Fallin MD. The association of genetic variants in interleukin-1 genes with cognition: findings from the cardiovascular health study. Experimental Gerontology. 46: 1010-9. PMID 21968104 DOI: 10.1016/j.exger.2011.09.005  0.72
2011 Dogra G, Chakravarti A, Kar P, Chawla YK. Polymorphism of tumor necrosis factor-α and interleukin-10 gene promoter region in chronic hepatitis C virus patients and their effect on pegylated interferon-α therapy response Human Immunology. 72: 935-939. PMID 21756957 DOI: 10.1016/j.humimm.2011.06.008  0.36
2011 Ho YY, Matteini AM, Beamer B, Fried L, Xue QL, Arking DE, Chakravarti A, Fallin MD, Walston J. Exploring biologically relevant pathways in frailty. The Journals of Gerontology. Series a, Biological Sciences and Medical Sciences. 66: 975-9. PMID 21743092 DOI: 10.1093/gerona/glr061  0.72
2011 Arking DE, Junttila MJ, Goyette P, Huertas-Vazquez A, Eijgelsheim M, Blom MT, Newton-Cheh C, Reinier K, Teodorescu C, Uy-Evanado A, Carter-Monroe N, Kaikkonen KS, Kortelainen ML, Boucher G, Lagacé C, ... ... Chakravarti A, et al. Identification of a sudden cardiac death susceptibility locus at 2q24.2 through genome-wide association in European ancestry individuals. Plos Genetics. 7: e1002158. PMID 21738491 DOI: 10.1371/journal.pgen.1002158  0.72
2011 Jiang Q, Ho YY, Hao L, Nichols Berrios C, Chakravarti A. Copy number variants in candidate genes are genetic modifiers of Hirschsprung disease. Plos One. 6: e21219. PMID 21712996 DOI: 10.1371/journal.pone.0021219  0.72
2011 Chakravarti A, Kumar A, Malik S. Detection of dengue infection by combining the use of an ns1 antigen based assay with antibody detection Southeast Asian Journal of Tropical Medicine and Public Health. 42: 297-302. PMID 21710849  0.36
2011 Chakravarti A. Genomic contributions to Mendelian disease. Genome Research. 21: 643-4. PMID 21536725 DOI: 10.1101/gr.123554.111  0.72
2011 Matlani M, Chakravarti A. Changing trends of dengue disease: A brief report from a tertiary care hospital in New Delhi Brazilian Journal of Infectious Diseases. 15: 184-185. PMID 21503411 DOI: 10.1590/S1413-86702011000200019  0.36
2011 Johnson AD, Newton-Cheh C, Chasman DI, Ehret GB, Johnson T, Rose L, Rice K, Verwoert GC, Launer LJ, Gudnason V, Larson MG, Chakravarti A, Psaty BM, Caulfield M, van Duijn CM, et al. Association of hypertension drug target genes with blood pressure and hypertension in 86,588 individuals. Hypertension. 57: 903-10. PMID 21444836 DOI: 10.1161/HYPERTENSIONAHA.110.158667  0.72
2011 Chakravarti A, Dogra G, Verma V, Srivastava AP. Distribution pattern of HCV genotypes & its association with viral load. The Indian Journal of Medical Research. 133: 326-31. PMID 21441689  0.36
2011 Zhu X, Young JH, Fox E, Keating BJ, Franceschini N, Kang S, Tayo B, Adeyemo A, Sun YV, Li Y, Morrison A, Newton-Cheh C, Liu K, Ganesh SK, Kutlar A, ... ... Chakravarti A, et al. Combined admixture mapping and association analysis identifies a novel blood pressure genetic locus on 5p13: contributions from the CARe consortium. Human Molecular Genetics. 20: 2285-95. PMID 21422096 DOI: 10.1093/hmg/ddr113  0.72
2011 Kraja AT, Vaidya D, Pankow JS, Goodarzi MO, Assimes TL, Kullo IJ, Sovio U, Mathias RA, Sun YV, Franceschini N, Absher D, Li G, Zhang Q, Feitosa MF, Glazer NL, ... ... Chakravarti A, et al. A bivariate genome-wide approach to metabolic syndrome: STAMPEED consortium. Diabetes. 60: 1329-39. PMID 21386085 DOI: 10.2337/db10-1011  0.72
2011 Fox ER, Young JH, Li Y, Dreisbach AW, Keating BJ, Musani SK, Liu K, Morrison AC, Ganesh S, Kutlar A, Ramachandran VS, Polak JF, Fabsitz RR, Dries DL, Farlow DN, ... ... Chakravarti A, et al. Association of genetic variation with systolic and diastolic blood pressure among African Americans: the Candidate Gene Association Resource study. Human Molecular Genetics. 20: 2273-84. PMID 21378095 DOI: 10.1093/hmg/ddr092  0.72
2011 Lettre G, Palmer CD, Young T, Ejebe KG, Allayee H, Benjamin EJ, Bennett F, Bowden DW, Chakravarti A, Dreisbach A, Farlow DN, Folsom AR, Fornage M, Forrester T, Fox E, et al. Genome-wide association study of coronary heart disease and its risk factors in 8,090 African Americans: the NHLBI CARe Project. Plos Genetics. 7: e1001300. PMID 21347282 DOI: 10.1371/journal.pgen.1001300  0.72
2011 Shi G, Boerwinkle E, Morrison AC, Gu CC, Chakravarti A, Rao DC. Mining gold dust under the genome wide significance level: a two-stage approach to analysis of GWAS. Genetic Epidemiology. 35: 111-8. PMID 21254218 DOI: 10.1002/gepi.20556  0.72
2011 Simino J, Shi G, Kume R, Schwander K, Province MA, Gu CC, Kardia S, Chakravarti A, Ehret G, Olshen RA, Turner ST, Ho LT, Zhu X, Jaquish C, Paltoo D, et al. Five blood pressure loci identified by an updated genome-wide linkage scan: meta-analysis of the Family Blood Pressure Program. American Journal of Hypertension. 24: 347-54. PMID 21151011 DOI: 10.1038/ajh.2010.238  0.72
2011 Scharpf RB, Ruczinski I, Carvalho B, Doan B, Chakravarti A, Irizarry RA. A multilevel model to address batch effects in copy number estimation using SNP arrays. Biostatistics (Oxford, England). 12: 33-50. PMID 20625178 DOI: 10.1093/biostatistics/kxq043  0.72
2010 Sotoodehnia N, Isaacs A, de Bakker PI, Dörr M, Newton-Cheh C, Nolte IM, van der Harst P, Müller M, Eijgelsheim M, Alonso A, Hicks AA, Padmanabhan S, Hayward C, Smith AV, Polasek O, ... ... Chakravarti A, et al. Common variants in 22 loci are associated with QRS duration and cardiac ventricular conduction. Nature Genetics. 42: 1068-76. PMID 21076409 DOI: 10.1038/ng.716  0.72
2010 Fradin D, Cheslack-Postava K, Ladd-Acosta C, Newschaffer C, Chakravarti A, Arking DE, Feinberg A, Fallin MD. Parent-of-origin effects in autism identified through genome-wide linkage analysis of 16,000 SNPs. Plos One. 5. PMID 20824079 DOI: 10.1371/journal.pone.0012513  0.72
2010 Meyer TE, Verwoert GC, Hwang SJ, Glazer NL, Smith AV, van Rooij FJ, Ehret GB, Boerwinkle E, Felix JF, Leak TS, Harris TB, Yang Q, Dehghan A, Aspelund T, Katz R, ... ... Chakravarti A, et al. Genome-wide association studies of serum magnesium, potassium, and sodium concentrations identify six Loci influencing serum magnesium levels. Plos Genetics. 6. PMID 20700443 DOI: 10.1371/journal.pgen.1001045  0.72
2010 Emison ES, Garcia-Barcelo M, Grice EA, Lantieri F, Amiel J, Burzynski G, Fernandez RM, Hao L, Kashuk C, West K, Miao X, Tam PK, Griseri P, Ceccherini I, Pelet A, ... ... Chakravarti A, et al. Differential contributions of rare and common, coding and noncoding Ret mutations to multifactorial Hirschsprung disease liability. American Journal of Human Genetics. 87: 60-74. PMID 20598273 DOI: 10.1016/j.ajhg.2010.06.007  0.72
2010 Moore AZ, Biggs ML, Matteini A, O'Connor A, McGuire S, Beamer BA, Fallin MD, Fried LP, Walston J, Chakravarti A, Arking DE. Polymorphisms in the mitochondrial DNA control region and frailty in older adults. Plos One. 5: e11069. PMID 20548781 DOI: 10.1371/journal.pone.0011069  0.72
2010 Antonarakis SE, Chakravarti A, Cohen JC, Hardy J. Mendelian disorders and multifactorial traits: the big divide or one for all? Nature Reviews. Genetics. 11: 380-4. PMID 20395971 DOI: 10.1038/nrg2793  0.72
2010 Ellinor PT, Lunetta KL, Glazer NL, Pfeufer A, Alonso A, Chung MK, Sinner MF, de Bakker PI, Mueller M, Lubitz SA, Fox E, Darbar D, Smith NL, Smith JD, Schnabel RB, ... ... Chakravarti A, et al. Common variants in KCNN3 are associated with lone atrial fibrillation. Nature Genetics. 42: 240-4. PMID 20173747 DOI: 10.1038/ng.537  0.72
2010 Pfeufer A, van Noord C, Marciante KD, Arking DE, Larson MG, Smith AV, Tarasov KV, Müller M, Sotoodehnia N, Sinner MF, Verwoert GC, Li M, Kao WH, Köttgen A, Coresh J, ... ... Chakravarti A, et al. Genome-wide association study of PR interval. Nature Genetics. 42: 153-9. PMID 20062060 DOI: 10.1038/ng.517  0.72
2010 Kucharska-Newton AM, Couper DJ, Pankow JS, Prineas RJ, Rea TD, Sotoodehnia N, Chakravarti A, Folsom AR, Siscovick DS, Rosamond WD. Diabetes and the risk of sudden cardiac death, the Atherosclerosis Risk in Communities study. Acta Diabetologica. 47: 161-8. PMID 19855920 DOI: 10.1007/s00592-009-0157-9  0.72
2010 North KE, Franceschini N, Avery CL, Baird L, Graff M, Leppert M, Chung JH, Zhang J, Hanis C, Boerwinkle E, Volcik KA, Grove ML, Mosley TH, Gu C, Heiss G, ... ... Chakravarti A, et al. Variation in the checkpoint kinase 2 gene is associated with type 2 diabetes in multiple populations. Acta Diabetologica. 47: 199-207. PMID 19855918 DOI: 10.1007/s00592-009-0162-z  0.72
2009 Ganesh SK, Zakai NA, van Rooij FJ, Soranzo N, Smith AV, Nalls MA, Chen MH, Kottgen A, Glazer NL, Dehghan A, Kuhnel B, Aspelund T, Yang Q, Tanaka T, Jaffe A, ... ... Chakravarti A, et al. Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium. Nature Genetics. 41: 1191-8. PMID 19862010 DOI: 10.1038/ng.466  0.72
2009 Weiss LA, Arking DE, Daly MJ, Chakravarti A, Brune CW, West K, O'Connor A, Hilton G, Tomlinson RL, West AB, Cook EH, Green T, Chang SC, Gabriel S, Gates C, et al. A genome-wide linkage and association scan reveals novel loci for autism Nature. 461: 802-808. PMID 19812673 DOI: 10.1038/nature08490  0.72
2009 Manolio TA, Collins FS, Cox NJ, Goldstein DB, Hindorff LA, Hunter DJ, McCarthy MI, Ramos EM, Cardon LR, Chakravarti A, Cho JH, Guttmacher AE, Kong A, Kruglyak L, Mardis E, et al. Finding the missing heritability of complex diseases. Nature. 461: 747-53. PMID 19812666 DOI: 10.1038/nature08494  0.72
2009 Kucharska-Newton AM, Couper DJ, Pankow JS, Prineas RJ, Rea TD, Sotoodehnia N, Chakravarti A, Folsom AR, Siscovick DS, Rosamond WD. Hemostasis, inflammation, and fatal and nonfatal coronary heart disease: long-term follow-up of the atherosclerosis risk in communities (ARIC) cohort. Arteriosclerosis, Thrombosis, and Vascular Biology. 29: 2182-90. PMID 19797708 DOI: 10.1161/ATVBAHA.109.192740  0.72
2009 Milan DJ, Kim AM, Winterfield JR, Jones IL, Pfeufer A, Sanna S, Arking DE, Amsterdam AH, Sabeh KM, Mably JD, Rosenbaum DS, Peterson RT, Chakravarti A, Kääb S, Roden DM, et al. Drug-sensitized zebrafish screen identifies multiple genes, including GINS3, as regulators of myocardial repolarization. Circulation. 120: 553-9. PMID 19652097 DOI: 10.1161/CIRCULATIONAHA.108.821082  0.72
2009 Benjamin EJ, Rice KM, Arking DE, Pfeufer A, van Noord C, Smith AV, Schnabel RB, Bis JC, Boerwinkle E, Sinner MF, Dehghan A, Lubitz SA, D'Agostino RB, Lumley T, Ehret GB, ... ... Chakravarti A, et al. Variants in ZFHX3 are associated with atrial fibrillation in individuals of European ancestry. Nature Genetics. 41: 879-81. PMID 19597492 DOI: 10.1038/ng.416  0.72
2009 Ehret GB, O'Connor AA, Weder A, Cooper RS, Chakravarti A. Follow-up of a major linkage peak on chromosome 1 reveals suggestive QTLs associated with essential hypertension: GenNet study. European Journal of Human Genetics : Ejhg. 17: 1650-7. PMID 19536175 DOI: 10.1038/ejhg.2009.94  0.72
2009 SanGiovanni JP, Arking DE, Iyengar SK, Elashoff M, Clemons TE, Reed GF, Henning AK, Sivakumaran TA, Xu X, DeWan A, Agrón E, Rochtchina E, Sue CM, Wang JJ, Mitchell P, ... ... Chakravarti A, et al. Mitochondrial DNA variants of respiratory complex I that uniquely characterize haplogroup T2 are associated with increased risk of age-related macular degeneration. Plos One. 4: e5508. PMID 19434233 DOI: 10.1371/journal.pone.0005508  0.72
2009 Levy D, Ehret GB, Rice K, Verwoert GC, Launer LJ, Dehghan A, Glazer NL, Morrison AC, Johnson AD, Aspelund T, Aulchenko Y, Lumley T, Köttgen A, Vasan RS, Rivadeneira F, ... ... Chakravarti A, et al. Genome-wide association study of blood pressure and hypertension. Nature Genetics. 41: 677-87. PMID 19430479 DOI: 10.1038/ng.384  0.72
2009 Joe B, Saad Y, Dhindaw S, Lee NH, Frank BC, Achinike OH, Luu TV, Gopalakrishnan K, Toland EJ, Farms P, Yerga-Woolwine S, Manickavasagam E, Rapp JP, Garrett MR, Coe D, ... ... Chakravarti A, et al. Positional identification of variants of Adamts16 linked to inherited hypertension. Human Molecular Genetics. 18: 2825-38. PMID 19423552 DOI: 10.1093/hmg/ddp218  0.72
2009 Pfeufer A, Sanna S, Arking DE, Müller M, Gateva V, Fuchsberger C, Ehret GB, Orrú M, Pattaro C, Köttgen A, Perz S, Usala G, Barbalic M, Li M, Pütz B, ... ... Chakravarti A, et al. Common variants at ten loci modulate the QT interval duration in the QTSCD Study. Nature Genetics. 41: 407-14. PMID 19305409 DOI: 10.1038/ng.362  0.72
2008 Lin S, Carvalho B, Cutler DJ, Arking DE, Chakravarti A, Irizarry RA. Validation and extension of an empirical Bayes method for SNP calling on Affymetrix microarrays. Genome Biology. 9: R63. PMID 18387188 DOI: 10.1186/gb-2008-9-4-r63  0.72
2008 Arking DE, Cutler DJ, Brune CW, Teslovich TM, West K, Ikeda M, Rea A, Guy M, Lin S, Cook EH, Chakravarti A. A common genetic variant in the neurexin superfamily member CNTNAP2 increases familial risk of autism. American Journal of Human Genetics. 82: 160-4. PMID 18179894 DOI: 10.1016/j.ajhg.2007.09.015  0.72
2007 Sabeti PC, Varilly P, Fry B, Lohmueller J, Hostetter E, Cotsapas C, Xie X, Byrne EH, McCarroll SA, Gaudet R, Schaffner SF, Lander ES, Frazer KA, Ballinger DG, ... ... Chakravarti A, et al. Genome-wide detection and characterization of positive selection in human populations. Nature. 449: 913-8. PMID 17943131 DOI: 10.1038/nature06250  0.72
2007 Frazer KA, Ballinger DG, Cox DR, Hinds DA, Stuve LL, Gibbs RA, Belmont JW, Boudreau A, Hardenbol P, Leal SM, Pasternak S, Wheeler DA, Willis TD, Yu F, ... ... Chakravarti A, et al. A second generation human haplotype map of over 3.1 million SNPs. Nature. 449: 851-61. PMID 17943122 DOI: 10.1038/nature06258  0.72
2007 Gherman A, Chen PE, Teslovich TM, Stankiewicz P, Withers M, Kashuk CS, Chakravarti A, Lupski JR, Cutler DJ, Katsanis N. Population bottlenecks as a potential major shaping force of human genome architecture. Plos Genetics. 3: e119. PMID 17658953 DOI: 10.1371/journal.pgen.0030119  0.72
2006 Blackman SM, Deering-Brose R, McWilliams R, Naughton K, Coleman B, Lai T, Algire M, Beck S, Hoover-Fong J, Hamosh A, Fallin MD, West K, Arking DE, Chakravarti A, Cutler DJ, et al. Relative contribution of genetic and nongenetic modifiers to intestinal obstruction in cystic fibrosis. Gastroenterology. 131: 1030-9. PMID 17030173 DOI: 10.1053/j.gastro.2006.07.016  0.72
2005 Maitra A, Arking DE, Shivapurkar N, Ikeda M, Stastny V, Kassauei K, Sui G, Cutler DJ, Liu Y, Brimble SN, Noaksson K, Hyllner J, Schulz TC, Zeng X, Freed WJ, ... ... Chakravarti A, et al. Genomic alterations in cultured human embryonic stem cells. Nature Genetics. 37: 1099-103. PMID 16142235 DOI: 10.1038/ng1631  0.72
2005 Mitchell AA, Chakravarti A, Cutler DJ. On the probability that a novel variant is a disease-causing mutation. Genome Research. 15: 960-6. PMID 15965029 DOI: 10.1101/gr.3761405  0.72
2005 Emison ES, McCallion AS, Kashuk CS, Bush RT, Grice E, Lin S, Portnoy ME, Cutler DJ, Green ED, Chakravarti A. A common sex-dependent mutation in a RET enhancer underlies Hirschsprung disease risk. Nature. 434: 857-63. PMID 15829955 DOI: 10.1038/nature03467  0.72
2004 Lin S, Chakravarti A, Cutler DJ. Exhaustive allelic transmission disequilibrium tests as a new approach to genome-wide association studies. Nature Genetics. 36: 1181-8. PMID 15502828 DOI: 10.1038/ng1457  0.72
2004 Lin S, Chakravarti A, Cutler DJ. Haplotype and missing data inference in nuclear families. Genome Research. 14: 1624-32. PMID 15256514 DOI: 10.1101/gr.2204604  0.72
2004 Mitchell AA, Zwick ME, Chakravarti A, Cutler DJ. Discrepancies in dbSNP confirmation rates and allele frequency distributions from varying genotyping error rates and patterns. Bioinformatics (Oxford, England). 20: 1022-32. PMID 14764571 DOI: 10.1093/bioinformatics/bth034  0.72
2003 Mitchell AA, Cutler DJ, Chakravarti A. Undetected genotyping errors cause apparent overtransmission of common alleles in the transmission/disequilibrium test. American Journal of Human Genetics. 72: 598-610. PMID 12587097 DOI: 10.1086/368203  0.72
2002 Lin S, Cutler DJ, Zwick ME, Chakravarti A. Haplotype inference in random population samples. American Journal of Human Genetics. 71: 1129-37. PMID 12386835 DOI: 10.1086/344347  0.72
2001 Cutler DJ, Zwick ME, Carrasquillo MM, Yohn CT, Tobin KP, Kashuk C, Mathews DJ, Shah NA, Eichler EE, Warrington JA, Chakravarti A. High-throughput variation detection and genotyping using microarrays. Genome Research. 11: 1913-25. PMID 11691856 DOI: 10.1101/gr.197201  0.72
2001 Mathews DJ, Kashuk C, Brightwell G, Eichler EE, Chakravarti A. Sequence variation within the fragile X locus. Genome Research. 11: 1382-91. PMID 11483579 DOI: 10.1101 /gr.172601  0.44
2000 Zwick ME, Cutler DJ, Chakravarti A. Patterns of genetic variation in Mendelian and complex traits. Annual Review of Genomics and Human Genetics. 1: 387-407. PMID 11701635 DOI: 10.1146/annurev.genom.1.1.387  0.72
2000 Fan JB, Chen X, Halushka MK, Berno A, Huang X, Ryder T, Lipshutz RJ, Lockhart DJ, Chakravarti A. Parallel genotyping of human SNPs using generic high-density oligonucleotide tag arrays. Genome Research. 10: 853-60. PMID 10854416  0.44
1999 Halushka MK, Mathews DJ, Bailey JA, Chakravarti A. GIST: A web tool for collecting gene information. Physiological Genomics. 1: 75-81. PMID 11015564  0.44
1999 Halushka MK, Fan JB, Bentley K, Hsie L, Shen N, Weder A, Cooper R, Lipshutz R, Chakravarti A. Patterns of single-nucleotide polymorphisms in candidate genes for blood-pressure homeostasis. Nature Genetics. 22: 239-47. PMID 10391210 DOI: 10.1038/10297  0.44
1998 Angrist M, Bolk S, Bentley K, Nallasamy S, Halushka MK, Chakravarti A. Genomic structure of the gene for the SH2 and pleckstrin homology domain-containing protein GRB10 and evaluation of its role in Hirschsprung disease. Oncogene. 17: 3065-70. PMID 9881709 DOI: 10.1038/sj.onc.1202226  0.44
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