Jody Deming - Publications

Affiliations: 
University of Washington, Seattle, Seattle, WA 
Area:
Oceanography Biology, Microbiology Biology

78 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Zhong ZP, Vik D, Rapp JZ, Zablocki O, Maughan H, Temperton B, Deming JW, Sullivan MB. Lower viral evolutionary pressure under stable versus fluctuating conditions in subzero Arctic brines. Microbiome. 11: 174. PMID 37550784 DOI: 10.1186/s40168-023-01619-6  0.383
2021 Rapp JZ, Sullivan MB, Deming JW. Divergent Genomic Adaptations in the Microbiomes of Arctic Subzero Sea-Ice and Cryopeg Brines. Frontiers in Microbiology. 12: 701186. PMID 34367102 DOI: 10.3389/fmicb.2021.701186  0.37
2020 Zhong ZP, Rapp JZ, Wainaina JM, Solonenko NE, Maughan H, Carpenter SD, Cooper ZS, Jang HB, Bolduc B, Deming JW, Sullivan MB. Viral Ecogenomics of Arctic Cryopeg Brine and Sea Ice. Msystems. 5. PMID 32546670 DOI: 10.1128/mSystems.00246-20  0.387
2019 Cooper ZS, Rapp JZ, Carpenter SD, Iwahana G, Eicken H, Deming JW. Distinctive microbial communities in subzero hypersaline brines from Arctic coastal sea ice and rarely sampled cryopegs. Fems Microbiology Ecology. PMID 31626297 DOI: 10.1093/Femsec/Fiz166  0.339
2019 Maccario L, Carpenter SD, Deming JW, Vogel TM, Larose C. Sources and selection of snow-specific microbial communities in a Greenlandic sea ice snow cover. Scientific Reports. 9: 2290. PMID 30783153 DOI: 10.1038/S41598-019-38744-Y  0.404
2019 Torstensson A, Young JN, Carlson LT, Ingalls AE, Deming JW. Use of exogenous glycine betaine and its precursor choline as osmoprotectants in Antarctic sea-ice diatoms. Journal of Phycology. PMID 30685888 DOI: 10.1111/Jpy.12839  0.361
2019 Søgaard D, Deming J, Meire L, Rysgaard S. Effects of microbial processes and CaCO3 dynamics on inorganic carbon cycling in snow-covered Arctic winter sea ice Marine Ecology Progress Series. 611: 31-44. DOI: 10.3354/meps12868  0.343
2019 Gourdal M, Crabeck O, Lizotte M, Galindo V, Gosselin M, Babin M, Scarratt M, Levasseur M, Deming JW, Arrigo K. Upward transport of bottom-ice dimethyl sulfide during advanced melting of arctic first-year sea ice Elem Sci Anth. 7. DOI: 10.1525/ELEMENTA.370  0.325
2018 Czajka JJ, Abernathy MH, Benites VT, Baidoo EEK, Deming JW, Tang YJ. Model metabolic strategy for heterotrophic bacteria in the cold ocean based on 34H. Proceedings of the National Academy of Sciences of the United States of America. PMID 30446608 DOI: 10.1073/pnas.1807804115  0.314
2018 Steffen KR, Epshteyn Y, Zhu J, Bowler MJ, Deming JW, Golden KM. Network Modeling of Fluid Transport Through Sea Ice with Entrained Exopolymeric Substances Multiscale Modeling & Simulation. 16: 106-124. DOI: 10.1137/17M1117513  0.321
2016 Lindensmith CA, Rider S, Bedrossian M, Wallace JK, Serabyn E, Showalter GM, Deming JW, Nadeau JL. A Submersible, Off-Axis Holographic Microscope for Detection of Microbial Motility and Morphology in Aqueous and Icy Environments. Plos One. 11: e0147700. PMID 26812683 DOI: 10.1371/journal.pone.0147700  0.345
2016 Firth E, Carpenter SD, Sørensen HL, Collins RE, Deming JW. Bacterial use of choline to tolerate salinity shifts in sea-ice brines Elementa. 2016. DOI: 10.12952/journal.elementa.000120  0.687
2016 Colangelo-Lillis J, Eicken H, Carpenter SD, Deming JW. Evidence for marine origin and microbial-viral habitability of sub-zero hypersaline aqueous inclusions within permafrost near Barrow, Alaska Fems Microbiology Ecology. 92. DOI: 10.1093/femsec/fiw053  0.415
2016 Bowman JS, Deming JW. Wind-driven distribution of bacteria in coastal Antarctica: evidence from the Ross Sea region Polar Biology. 1-11. DOI: 10.1007/S00300-016-1921-2  0.664
2015 Boetius A, Anesio AM, Deming JW, Mikucki JA, Rapp JZ. Microbial ecology of the cryosphere: sea ice and glacial habitats. Nature Reviews. Microbiology. 13: 677-90. PMID 26344407 DOI: 10.1038/Nrmicro3522  0.403
2014 Bowman JS, Deming JW. Alkane hydroxylase genes in psychrophile genomes and the potential for cold active catalysis. Bmc Genomics. 15: 1120. PMID 25515036 DOI: 10.1186/1471-2164-15-1120  0.576
2014 Ewert M, Deming JW. Bacterial responses to fluctuations and extremes in temperature and brine salinity at the surface of Arctic winter sea ice. Fems Microbiology Ecology. 89: 476-89. PMID 24903191 DOI: 10.1111/1574-6941.12363  0.419
2014 Bowman JS, Berthiaume CT, Armbrust EV, Deming JW. The genetic potential for key biogeochemical processes in Arctic frost flowers and young sea ice revealed by metagenomic analysis. Fems Microbiology Ecology. 89: 376-87. PMID 24673287 DOI: 10.1111/1574-6941.12331  0.683
2014 Kellogg CT, Deming JW. Particle-associated extracellular enzyme activity and bacterial community composition across the Canadian Arctic Ocean. Fems Microbiology Ecology. 89: 360-75. PMID 24666253 DOI: 10.1111/1574-6941.12330  0.773
2014 Barber DG, Ehn JK, Pućko M, Rysgaard S, Deming JW, Bowman JS, Papakyriakou T, Galley RJ, Søgaard DH. Frost flowers on young Arctic sea ice: The climatic, chemical, and microbial significance of an emerging ice type Journal of Geophysical Research: Atmospheres. 119: 11,593-11,612. DOI: 10.1002/2014Jd021736  0.67
2013 Ewert M, Deming JW. Sea ice microorganisms: environmental constraints and extracellular responses. Biology. 2: 603-28. PMID 24832800 DOI: 10.3390/biology2020603  0.382
2013 Bowman JS, Larose C, Vogel TM, Deming JW. Selective occurrence of Rhizobiales in frost flowers on the surface of young sea ice near Barrow, Alaska and distribution in the polar marine rare biosphere. Environmental Microbiology Reports. 5: 575-82. PMID 23864572 DOI: 10.1111/1758-2229.12047  0.698
2013 Collins RE, Deming JW. An inter-order horizontal gene transfer event enables the catabolism of compatible solutes by Colwellia psychrerythraea 34H. Extremophiles : Life Under Extreme Conditions. 17: 601-10. PMID 23674353 DOI: 10.1007/s00792-013-0543-7  0.671
2013 Tamburini C, Boutrif M, Garel M, Colwell RR, Deming JW. Prokaryotic responses to hydrostatic pressure in the ocean--a review. Environmental Microbiology. 15: 1262-74. PMID 23419081 DOI: 10.1111/1462-2920.12084  0.465
2013 Rysgaard S, Søgaard DH, Cooper M, Pu&cacute;ko M, Lennert K, Papakyriakou TN, Wang F, Geilfus NX, Glud RN, Ehn J, McGinnis DF, Attard K, Sievers J, Deming JW, Barber D. Ikaite crystal distribution in winter sea ice and implications for CO<sub>2</sub> system dynamics The Cryosphere. 7: 707-718. DOI: 10.5194/Tc-7-707-2013  0.37
2013 Ewert M, Carpenter SD, Colangelo-Lillis J, Deming JW. Bacterial and extracellular polysaccharide content of brine-wetted snow over Arctic winter first-year sea ice Journal of Geophysical Research: Oceans. 118: 726-735. DOI: 10.1002/jgrc.20055  0.402
2012 Bowman JS, Rasmussen S, Blom N, Deming JW, Rysgaard S, Sicheritz-Ponten T. Microbial community structure of Arctic multiyear sea ice and surface seawater by 454 sequencing of the 16S RNA gene. The Isme Journal. 6: 11-20. PMID 21716307 DOI: 10.1038/Ismej.2011.76  0.666
2011 Krembs C, Eicken H, Deming JW. Exopolymer alteration of physical properties of sea ice and implications for ice habitability and biogeochemistry in a warmer Arctic. Proceedings of the National Academy of Sciences of the United States of America. 108: 3653-8. PMID 21368216 DOI: 10.1073/Pnas.1100701108  0.371
2011 Ewert M, Deming JW. Selective retention in saline ice of extracellular polysaccharides produced by the cold-adapted marine bacteriumColwellia psychrerythraeastrain 34H Annals of Glaciology. 52: 111-117. DOI: 10.3189/172756411795931868  0.402
2011 Miller LA, Papakyriakou TN, Collins RE, Deming JW, Ehn JK, MacDonald RW, Mucci A, Owens O, Raudsepp M, Sutherland N. Carbon dynamics in sea ice: A winter flux time series Journal of Geophysical Research: Oceans. 116. DOI: 10.1029/2009Jc006058  0.685
2011 Forest A, Tremblay Je, Gratton Y, Martin J, Gagnon J, Darnis G, Sampei M, Fortier L, Ardyna M, Gosselin M, Hattori H, Nguyen D, Maranger R, Vaqué D, Marrasé C, ... ... Deming J, et al. Biogenic carbon flows through the planktonic food web of the Amundsen Gulf (Arctic Ocean): A synthesis of field measurements and inverse modeling analyses Progress in Oceanography. 91: 410-436. DOI: 10.1016/J.Pocean.2011.05.002  0.776
2011 Deming JW, Fortier L. Introduction to the special issue on the biology of the circumpolar flaw lead (CFL) in the Amundsen Gulf of the Beaufort Sea (Arctic Ocean) Polar Biology. 34: 1797-1801. DOI: 10.1007/s00300-011-1125-8  0.352
2011 Collins RE, Deming JW. Abundant dissolved genetic material in Arctic sea ice Part I: Extracellular DNA Polar Biology. 34: 1819-1830. DOI: 10.1007/s00300-011-1041-y  0.636
2011 Kellogg CTE, Carpenter SD, Renfro AA, Sallon A, Michel C, Cochran JK, Deming JW. Evidence for microbial attenuation of particle flux in the Amundsen Gulf and Beaufort Sea: Elevated hydrolytic enzyme activity on sinking aggregates Polar Biology. 34: 2007-2023. DOI: 10.1007/S00300-011-1015-0  0.361
2011 Collins RE, Deming JW. Abundant dissolved genetic material in Arctic sea ice Part II: Viral dynamics during autumn freeze-up Polar Biology. 34: 1831-1841. DOI: 10.1007/s00300-011-1008-z  0.636
2010 Collins RE, Rocap G, Deming JW. Persistence of bacterial and archaeal communities in sea ice through an Arctic winter. Environmental Microbiology. 12: 1828-41. PMID 20192970 DOI: 10.1111/j.1462-2920.2010.02179.x  0.7
2010 Bowman JS, Deming JW. Elevated bacterial abundance and exopolymers in saline frost flowers and implications for atmospheric chemistry and microbial dispersal Geophysical Research Letters. 37: n/a-n/a. DOI: 10.1029/2010Gl043020  0.69
2008 Collins RE, Carpenter SD, Deming JW. Spatial heterogeneity and temporal dynamics of particles, bacteria, and pEPS in Arctic winter sea ice Journal of Marine Systems. 74: 902-917. DOI: 10.1016/j.jmarsys.2007.09.005  0.72
2008 Deming JW, Carpenter SD. Factors influencing benthic bacterial abundance, biomass, and activity on the northern continental margin and deep basin of the Gulf of Mexico Deep-Sea Research Part Ii: Topical Studies in Oceanography. 55: 2597-2606. DOI: 10.1016/j.dsr2.2008.07.009  0.313
2006 Wells LE, Deming JW. Modelled and measured dynamics of viruses in Arctic winter sea-ice brines. Environmental Microbiology. 8: 1115-21. PMID 16689732 DOI: 10.1111/J.1462-2920.2006.00984.X  0.811
2006 Junge K, Eicken H, Swanson BD, Deming JW. Bacterial incorporation of leucine into protein down to -20 degrees C with evidence for potential activity in sub-eutectic saline ice formations. Cryobiology. 52: 417-29. PMID 16647051 DOI: 10.1016/J.Cryobiol.2006.03.002  0.787
2006 Wells LE, Cordray M, Bowerman S, Miller LA, Vincent WF, Deming JW. Archaea in particle-rich waters of the Beaufort Shelf and Franklin Bay, Canadian Arctic: Clues to an allochthonous origin? Limnology and Oceanography. 51: 47-59. DOI: 10.4319/Lo.2006.51.1.0047  0.768
2006 Wells L, Deming J. Effects of temperature, salinity and clay particles on inactivation and decay of cold-active marine Bacteriophage 9A Aquatic Microbial Ecology. 45: 31-39. DOI: 10.3354/Ame045031  0.781
2006 Wells L, Deming J. Characterization of a cold-active bacteriophage on two psychrophilic marine hosts Aquatic Microbial Ecology. 45: 15-29. DOI: 10.3354/Ame045015  0.764
2006 Wells L, Deming J. Significance of bacterivory and viral lysis in bottom waters of Franklin Bay, Canadian Arctic, during winter Aquatic Microbial Ecology. 43: 209-221. DOI: 10.3354/Ame043209  0.797
2005 Methé BA, Nelson KE, Deming JW, Momen B, Melamud E, Zhang X, Moult J, Madupu R, Nelson WC, Dodson RJ, Brinkac LM, Daugherty SC, Durkin AS, DeBoy RT, Kolonay JF, et al. The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses Proceedings of the National Academy of Sciences of the United States of America. 102: 10913-10918. PMID 16043709 DOI: 10.1073/Pnas.0504766102  0.77
2005 Tang YJ, Carpenter S, Deming J, Krieger-Brockett B. Controlled release of nitrate and sulfate to enhance anaerobic bioremediation of phenanthrene in marine sediments. Environmental Science & Technology. 39: 3368-73. PMID 15926591 DOI: 10.1021/Es040427W  0.336
2004 Huston AL, Methe B, Deming JW. Purification, characterization, and sequencing of an extracellular cold-active aminopeptidase produced by marine psychrophile Colwellia psychrerythraea strain 34H. Applied and Environmental Microbiology. 70: 3321-8. PMID 15184127 DOI: 10.1128/Aem.70.6.3321-3328.2004  0.782
2004 Junge K, Eicken H, Deming JW. Bacterial Activity at -2 to -20 degrees C in Arctic wintertime sea ice. Applied and Environmental Microbiology. 70: 550-7. PMID 14711687 DOI: 10.1128/Aem.70.1.550-557.2004  0.814
2004 Junge K, Deming JW, Eicken H. A Microscopic Approach to Investigate Bacteria under In-Situ Conditions in Arctic Lake Ice: Initial Comparisons to Sea Ice Symposium - International Astronomical Union. 213: 381-388. DOI: 10.1017/s0074180900193581  0.805
2003 Junge K, Eicken H, Deming JW. Motility of Colwellia psychrerythraea strain 34H at subzero temperatures. Applied and Environmental Microbiology. 69: 4282-4. PMID 12839815 DOI: 10.1128/Aem.69.7.4282-4284.2003  0.751
2003 Wells L, Deming J. Abundance of Bacteria, the Cytophaga-Flavobacterium cluster and Archaea in cold oligotrophic waters and nepheloid layers of the Northwest Passage, Canadian Archipelago Aquatic Microbial Ecology. 31: 19-31. DOI: 10.3354/Ame031019  0.766
2003 Phillips H, Wells LE, Johnson RV, Elliott S, Deming JW. LAREDO: a new instrument for sampling and in situ incubation of deep-sea hydrothermal vent fluids Deep Sea Research Part I: Oceanographic Research Papers. 50: 1375-1387. DOI: 10.1016/S0967-0637(03)00127-4  0.757
2002 Junge K, Imhoff F, Staley T, Deming JW. Phylogenetic diversity of numerically important Arctic sea-ice bacteria cultured at subzero temperature. Microbial Ecology. 43: 315-28. PMID 12037610 DOI: 10.1007/S00248-001-1026-4  0.8
2002 Huston A, Deming J. Relationships between microbial extracellular enzymatic activity and suspended and sinking particulate organic matter: seasonal transformations in the North Water Deep Sea Research Part Ii: Topical Studies in Oceanography. 49: 5211-5225. DOI: 10.1016/S0967-0645(02)00186-8  0.803
2002 Krembs C, Eicken H, Junge K, Deming J. High concentrations of exopolymeric substances in Arctic winter sea ice: implications for the polar ocean carbon cycle and cryoprotection of diatoms Deep Sea Research Part I: Oceanographic Research Papers. 49: 2163-2181. DOI: 10.1016/S0967-0637(02)00122-X  0.802
2001 Junge K, Krembs C, Deming J, Stierle A, Eicken H. A microscopic approach to investigate bacteria under in situ conditions in sea-ice samples Annals of Glaciology. 33: 304-310. DOI: 10.3189/172756401781818275  0.811
2000 Huston AL, Krieger-Brockett BB, Deming JW. Remarkably low temperature optima for extracellular enzyme activity from Arctic bacteria and sea ice. Environmental Microbiology. 2: 383-8. PMID 11234926 DOI: 10.1046/J.1462-2920.2000.00118.X  0.809
1999 Yager PL, Deming JW. Pelagic microbial activity in an arctic polynya: Testing for temperature and substrate interactions using a kinetic approach Limnology and Oceanography. 44: 1882-1893. DOI: 10.4319/Lo.1999.44.8.1882  0.67
1998 Smith CR, Maybaum HL, Baco AR, Pope RH, Carpenter SD, Yager PL, Macko SA, Deming JW. Sediment community structure around a whale skeleton in the deep Northeast Pacific: Macrofaunal, microbial and bioturbation effects Deep-Sea Research Part Ii: Topical Studies in Oceanography. 45: 335-364. DOI: 10.1016/S0967-0645(97)00043-X  0.649
1997 Rowe GT, Boland GS, Escobar Briones EG, Cruz-Kaegi ME, Newton A, Piepenburg D, Walsh I, Deming J. Sediment community biomass and respiration in the Northeast Water Polynya, Greenland: A numerical simulation of benthic lander and spade core data Journal of Marine Systems. 10: 497-515. DOI: 10.1016/S0924-7963(96)00065-6  0.435
1995 Yager PL, Wallace DWR, Johnson KM, Smith WO, Minnett PJ, Deming JW. The Northeast Water Polynya as an atmospheric CO2sink: A seasonal rectification hypothesis Journal of Geophysical Research. 100: 4389. DOI: 10.1029/94JC01962  0.62
1994 Vetter Y A, Deming J. Extracellular enzyme activity in the Arctic Northeast Water polynya Marine Ecology Progress Series. 114: 23-34. DOI: 10.3354/Meps114023  0.458
1993 Deming JW, Baross JA. Deep-sea smokers: Windows to a subsurface biosphere? Geochimica Et Cosmochimica Acta. 57: 3219-3230. PMID 11538298 DOI: 10.1016/0016-7037(93)90535-5  0.341
1993 Deming J. Northeast water polynya: Polar sea cruise results Eos, Transactions American Geophysical Union. 74: 185-196. DOI: 10.1029/93Eo00264  0.399
1991 Rowe G, Sibuet M, Deming J, Khripounoff A, Tietjen J, Macko S, Theroux R. Total sediment biomass and preliminary estimates of organic carbon residence time in deep-sea benthos Marine Ecology Progress Series. 79: 99-114. DOI: 10.3354/Meps079099  0.355
1990 Straube WL, Deming JW, Somerville CC, Colwell RR, Baross JA. Particulate DNA in Smoker Fluids: Evidence for Existence of Microbial Populations in Hot Hydrothermal Systems Applied and Environmental Microbiology. 56: 1440-1447. DOI: 10.1128/Aem.56.5.1440-1447.1990  0.364
1990 Rowe GT, Sibuet M, Deming J, Tietjen J, Khripounoff A. Organic carbon turnover time in deep-sea benthos Progress in Oceanography. 24: 141-160. DOI: 10.1016/0079-6611(90)90026-X  0.372
1985 Deming J. Bacterial growth in deep-sea sediment trap and boxcore samples Marine Ecology Progress Series. 25: 305-312. DOI: 10.3354/Meps025305  0.463
1985 Deming JW, Colwell RR. Observations of Barophilic Microbial Activity in Samples of Sediment and Intercepted Particulates from the Demerara Abyssal Plain Applied and Environmental Microbiology. 50: 1002-1006. DOI: 10.1128/Aem.50.4.1002-1006.1985  0.455
1984 Deming JW, Hada H, Colwell RR, Luehrsen KR, Fox GE. The ribonucleotide sequence of 5S rRNA from two strains of deep-sea barophilic bacteria Journal of General Microbiology. 130: 1911-1920. PMID 6206199 DOI: 10.1099/00221287-130-8-1911  0.456
1982 Deming JW, Colwell RR. Barophilic Bacteria Associated with Digestive Tracts of Abyssal Holothurians Applied and Environmental Microbiology. 44: 1222-1230. DOI: 10.1128/Aem.44.5.1222-1230.1982  0.487
1982 Tabor PS, Deming JW, Ohwada K, Colwell RR. Activity and growth of microbial populations in pressurized deep-sea sediment and animal gut samples. Applied and Environmental Microbiology. 44: 413-422. DOI: 10.1128/aem.44.2.413-422.1982  0.424
1981 Deming JW, Colwell RR. Barophilic Bacteria Associated with Deep-Sea Animals Bioscience. 31: 507-511. DOI: 10.2307/1308493  0.465
1981 Peele ER, Singleton FL, Deming JW, Cavari B, Colwell RR. Effects of Pharmaceutical Wastes on Microbial Populations in Surface Waters at the Puerto Rico Dump Site in the Atlantic Ocean Applied and Environmental Microbiology. 41: 873-879. DOI: 10.1128/Aem.41.4.873-879.1981  0.463
1981 Deming JW, Tabor PS, Colwell RR. Barophilic growth of bacteria from intestinal tracts of deep-sea invertebrates Microbial Ecology. 7: 85-94. DOI: 10.1007/Bf02010480  0.438
1981 Tabor PS, Deming JW, Ohwada K, Davis H, Waxman M, Colwell RR. A pressure-retaining deep ocean sampler and transfer system for measurement of microbial activity in the deep sea Microbial Ecology. 7: 51-65. DOI: 10.1007/Bf02010478  0.439
1979 Deming J, Picciolo G, Chappelle E. Important Factors in Adenosine Triphosphate Determinations Using Firefly Luciferase: Applicability of the Assay to Studies of Native Aquatic Bacteria Astm Special Technical Publications. 89-98. DOI: 10.1520/Stp36007S  0.301
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