P. David Polly, Ph.D. - Publications

Affiliations: 
1997-2001 Anatomy / Molecular and Cellular Biology Barts and The London School of Medicine and Dentistry 
 2001-2006 School of Biological Sciences Queen Mary University of London, London, England, United Kingdom 
 2006- Earth and Atmospheric Sciences Indiana University, Bloomington, Bloomington, IN, United States 
Area:
Vertebrate paleontology, mammal evolution, phenotypic evolution, climate change biology, ecometrics
Website:
https://pollylab.indiana.edu/

82 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Fuentes-G JA, Polly PD, Martins EP. A Bayesian extension of phylogenetic generalized least squares: Incorporating uncertainty in the comparative study of trait relationships and evolutionary rates. Evolution; International Journal of Organic Evolution. PMID 31849034 DOI: 10.1111/Evo.13899  1
2019 Goswami A, Watanabe A, Felice RN, Bardua C, Fabre AC, Polly PD. High-density morphometric analysis of shape and integration: the good, the bad, and the not-really-a-problem. Integrative and Comparative Biology. PMID 31243431 DOI: 10.1093/Icb/Icz120  1
2018 Jones KE, Angielczyk KD, Polly PD, Head JJ, Fernandez V, Lungmus JK, Tulga S, Pierce SE. Fossils reveal the complex evolutionary history of the mammalian regionalized spine. Science (New York, N.Y.). 361: 1249-1252. PMID 30237356 DOI: 10.1126/Science.Aar3126  1
2017 Barnosky AD, Hadly EA, Gonzalez P, Head J, Polly PD, Lawing AM, Eronen JT, Ackerly DD, Alex K, Biber E, Blois J, Brashares J, Ceballos G, Davis E, Dietl GP, et al. Merging paleobiology with conservation biology to guide the future of terrestrial ecosystems. Science (New York, N.Y.). 355. PMID 28183912 DOI: 10.1126/Science.Aah4787  1
2017 Gómez-Robles A, Smaers JB, Holloway RL, Polly PD, Wood BA. Brain enlargement and dental reduction were not linked in hominin evolution. Proceedings of the National Academy of Sciences of the United States of America. PMID 28049819 DOI: 10.1073/Pnas.1608798114  1
2016 Polly PD. Quantitative genetics provides predictive power for paleontological studies of morphological evolution. Proceedings of the National Academy of Sciences of the United States of America. PMID 27496325 DOI: 10.1073/Pnas.1610454113  0.01
2016 Lawing AM, Polly PD, Hews DK, Martins EP. Including Fossils in Phylogenetic Climate Reconstructions: A Deep Time Perspective on the Climatic Niche Evolution and Diversification of Spiny Lizards (Sceloporus). The American Naturalist. 188: 133-48. PMID 27420780 DOI: 10.1086/687202  1
2016 Goswami A, Randau M, Polly PD, Weisbecker V, Bennett CV, Hautier L, Sánchez-Villagra MR. Do Developmental Constraints and High Integration Limit the Evolution of the Marsupial Oral Apparatus? Integrative and Comparative Biology. PMID 27260858 DOI: 10.1093/Icb/Icw039  1
2016 Polly PD, Lawing AM, Eronen JT, Schnitzler J. Processes of ecometric patterning: Modelling functional traits, environments, and clade dynamics in deep time Biological Journal of the Linnean Society. 118: 39-63. DOI: 10.1111/Bij.12716  1
2016 Polly PD, Stayton CT, Dumont ER, Pierce SE, Rayfield EJ, Angielczyk KD. Combining geometric morphometrics and finite element analysis with evolutionary modeling: towards a synthesis Journal of Vertebrate Paleontology. 36. DOI: 10.1080/02724634.2016.1111225  1
2015 Polly PD. Gene networks, occlusal clocks, and functional patches: new understanding of pattern and process in the evolution of the dentition. Odontology / the Society of the Nippon Dental University. 103: 117-25. PMID 25986362 DOI: 10.1007/S10266-015-0208-3  0.01
2015 Ksepka DT, Parham JF, Allman JF, Benton MJ, Carrano MT, Cranston KA, Donoghue PC, Head JJ, Hermsen EJ, Irmis RB, Joyce WG, Kohli M, Lamm KD, Leehr D, Patané JL, ... Polly PD, et al. The Fossil Calibration Database-A New Resource for Divergence Dating. Systematic Biology. PMID 25922515 DOI: 10.1093/Sysbio/Syv025  1
2015 Head JJ, Polly PD. Evolution of the snake body form reveals homoplasy in amniote Hox gene function. Nature. 520: 86-9. PMID 25539083 DOI: 10.1038/Nature14042  1
2015 David Polly P, Ksepka DT, Parham JF. Announcing the fossil calibration series and database Palaeontologia Electronica. 18. DOI: 10.26879/151E  0.56
2015 Aguilar-Medrano R, Reyes-Bonilla H, Polly PD. Adaptive radiation of damselfishes (Perciformes, Pomacentridae) in the eastern Pacific Marine Biology. 162: 2291-2303. DOI: 10.1007/S00227-015-2759-9  1
2014 Polly PD. Trait-based extinction catches the Red Queen napping during the Cambrian. Proceedings of the National Academy of Sciences of the United States of America. 111: 16240-1. PMID 25369935 DOI: 10.1073/Pnas.1419138111  0.01
2014 Goswami A, Smaers JB, Soligo C, Polly PD. The macroevolutionary consequences of phenotypic integration: from development to deep time. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 369: 20130254. PMID 25002699 DOI: 10.1098/Rstb.2013.0254  1
2014 Polly PD, Sarwar S. Extinction, extirpation, and exotics: Effects on the correlation between traits and environment at the continental level Annales Zoologici Fennici. 51: 209-226. DOI: 10.5735/086.051.0221  0.01
2013 Gómez-Robles A, Bermúdez de Castro JM, Arsuaga JL, Carbonell E, Polly PD. No known hominin species matches the expected dental morphology of the last common ancestor of Neanderthals and modern humans. Proceedings of the National Academy of Sciences of the United States of America. 110: 18196-201. PMID 24145426 DOI: 10.1073/Pnas.1302653110  1
2013 Rödder D, Lawing AM, Flecks M, Ahmadzadeh F, Dambach J, Engler JO, Habel JC, Hartmann T, Hörnes D, Ihlow F, Schidelko K, Stiels D, Polly PD. Evaluating the significance of paleophylogeographic species distribution models in reconstructing quaternary range-shifts of nearctic chelonians. Plos One. 8: e72855. PMID 24130664 DOI: 10.1371/Journal.Pone.0072855  1
2013 Grossnickle DM, Polly PD. Mammal disparity decreases during the Cretaceous angiosperm radiation. Proceedings. Biological Sciences / the Royal Society. 280: 20132110. PMID 24089340 DOI: 10.1098/Rspb.2013.2110  0.88
2013 Cardini A, Polly PD. Larger mammals have longer faces because of size-related constraints on skull form. Nature Communications. 4: 2458. PMID 24045342 DOI: 10.1038/Ncomms3458  1
2013 Polly PD, Polyakov AV, Ilyashenko VB, Onischenko SS, White TA, Shchipanov NA, Bulatova NS, Pavlova SV, Borodin PM, Searle JB. Phenotypic variation across chromosomal hybrid zones of the common shrew (Sorex araneus) indicates reduced gene flow. Plos One. 8: e67455. PMID 23874420 DOI: 10.1371/Journal.Pone.0067455  1
2013 Polly PD. Evolution: stuck between the teeth. Nature. 497: 325-6. PMID 23636323 DOI: 10.1038/Nature12099  0.01
2013 David Polly P, Michelle Lawing A, Fabre AC, Goswami A. Phylogenetic principal components analysis and geometric morphometrics Hystrix. 24. DOI: 10.4404/Hystrix-24.1-6383  0.84
2013 Smith MR, Polly PD. A reevaluation of the harrodsburg crevice fauna (late pleistocene of Indiana, U.S.A.) and the climatic implications of its mammals Journal of Vertebrate Paleontology. 33: 410-420. DOI: 10.1080/02724634.2013.725440  0.76
2013 Uhen MD, Barnosky AD, Bills B, Blois J, Carrano MT, Carrasco MA, Erickson GM, Eronen JT, Fortelius M, Graham RW, Grimm EC, Oleary MA, Mast A, Piel WH, Polly PD, et al. From card catalogs to computers: Databases in vertebrate paleontology Journal of Vertebrate Paleontology. 33: 13-28. DOI: 10.1080/02724634.2012.716114  1
2013 Polly PD. Digital diversity: Publication of new names is now completely electronic Palaeontologia Electronica. 16.  0.01
2012 Gómez-Robles A, Polly PD. Morphological integration in the hominin dentition: evolutionary, developmental, and functional factors. Evolution; International Journal of Organic Evolution. 66: 1024-43. PMID 22486687 DOI: 10.1111/J.1558-5646.2011.01508.X  1
2012 Goswami A, Polly PD, Mock OB, Sánchez-Villagra MR. Shape, variance and integration during craniogenesis: contrasting marsupial and placental mammals. Journal of Evolutionary Biology. 25: 862-72. PMID 22356604 DOI: 10.1111/J.1420-9101.2012.02477.X  1
2012 Polly PD. Measuring the evolution of body size in mammals. Proceedings of the National Academy of Sciences of the United States of America. 109: 4027-8. PMID 22355132 DOI: 10.1073/Pnas.1201030109  0.01
2011 Lawing AM, Polly PD. Pleistocene climate, phylogeny, and climate envelope models: an integrative approach to better understand species' response to climate change. Plos One. 6: e28554. PMID 22164305 DOI: 10.1371/Journal.Pone.0028554  1
2011 Johnson LJ, Cotton JA, Lichtenstein CP, Elgar GS, Nichols RA, Polly PD, Le Comber SC. Stops making sense: translational trade-offs and stop codon reassignment. Bmc Evolutionary Biology. 11: 227. PMID 21801361 DOI: 10.1186/1471-2148-11-227  1
2011 Ksepka DT, Benton MJ, Carrano MT, Gandolfo MA, Head JJ, Hermsen EJ, Joyce WG, Lamm KS, Patané JS, Phillips MJ, Polly PD, Van Tuinen M, Ware JL, Warnock RC, Parham JF. Synthesizing and databasing fossil calibrations: divergence dating and beyond. Biology Letters. 7: 801-3. PMID 21525049 DOI: 10.1098/Rsbl.2011.0356  1
2011 Polly PD, Eronen JT, Fred M, Dietl GP, Mosbrugger V, Scheidegger C, Frank DC, Damuth J, Stenseth NC, Fortelius M. History matters: ecometrics and integrative climate change biology. Proceedings. Biological Sciences / the Royal Society. 278: 1131-40. PMID 21227966 DOI: 10.1098/Rspb.2010.2233  1
2011 Head JJ, Bloch JI, Hastings AK, Bourque JR, Cadena EA, Herrera FA, Polly PD, Jaramillo CA. Giant boid snake from the Paleocene neotropics reveals hotter past equatorial temperatures Nature. DOI: 10.1038/nature10271  1
2011 Bose R, Schneider CL, Leighton LR, Polly PD. Influence of atrypid morphological shape on Devonian episkeletobiont assemblages from the lower Genshaw formation of the Traverse Group of Michigan: A geometric morphometric approach Palaeogeography, Palaeoclimatology, Palaeoecology. 310: 427-441. DOI: 10.1016/J.Palaeo.2011.08.004  1
2011 Polly PD, Eronen JT. Mammal Associations in the Pleistocene of Britain. Implications of Ecological Niche Modelling and a Method for Reconstructing Palaeoclimate Developments in Quaternary Science. 14: 279-304. DOI: 10.1016/B978-0-444-53597-9.00015-7  1
2011 Polly PD, Killick L, Ruddy M. Using left-right asymmetry to estimate non-genetic variation in vole teeth (Arvicolinae, Muridae, Rodentia) Palaeontologia Electronica. 14: 26.  0.01
2010 Eronen JT, Polly PD, Fred M, Damuth J, Frank DC, Mosbrugger V, Scheidegger C, Stenseth NC, Fortelius M. Ecometrics: the traits that bind the past and present together. Integrative Zoology. 5: 88-101. PMID 21392327 DOI: 10.1111/J.1749-4877.2010.00192.X  1
2010 Goswami A, Polly PD. The influence of modularity on cranial morphological disparity in Carnivora and Primates (Mammalia). Plos One. 5: e9517. PMID 20209089 DOI: 10.1371/Journal.Pone.0009517  1
2010 Poroshin EA, Polly PD, Wójcik JM. Climate and morphological change on decadal scales: Multiannual variation in the common shrew Sorex araneus in northeast Russia Acta Theriologica. 55: 193-202. DOI: 10.4098/J.At.0001-7051.106.2009  0.01
2010 Bose R, Schneider C, Polly PD, Yacobucci MM. Ecological interactions between rhipidomella (ORTHIDES, BRACHIOPODA) and its endoskeletobionts and predators from the middle Devonian Dundee formation of Ohio, United States Palaios. 25: 196-208. DOI: 10.2110/Palo.2009.P09-119R  1
2010 Lawing AM, Polly PD. Geometric morphometrics: Recent applications to the study of evolution and development: REVIEW Journal of Zoology. 280: 1-7. DOI: 10.1111/J.1469-7998.2009.00620.X  1
2009 Head JJ, Bloch JI, Hastings AK, Bourque JR, Cadena EA, Herrera FA, Polly PD, Jaramillo CA. Giant boid snake from the Palaeocene neotropics reveals hotter past equatorial temperatures. Nature. 457: 715-7. PMID 19194448 DOI: 10.1038/Nature07671  1
2009 Schutz H, Polly PD, Krieger JD, Guralnick RP. Differential sexual dimorphism: Size and shape in the cranium and pelvis of grey foxes (Urocyon) Biological Journal of the Linnean Society. 96: 339-353. DOI: 10.1111/J.1095-8312.2008.01132.X  1
2009 Cardini A, Nagorsen D, O'Higgins P, Polly PD, Thorington RW, Tongiorgi P. Detecting biological distinctiveness using geometric morphometrics: An example case from the Vancouver Island marmot Ethology Ecology and Evolution. 21: 209-223. DOI: 10.1080/08927014.2009.9522476  1
2009 Head JJ, Bloch JI, Hastings AK, Bourque JR, Cadena EA, Herrera FA, Polly PD, Jaramillo CA. Head et al. reply Nature. 460: E4-E5. DOI: 10.1038/Nature08225  1
2008 Atar M, Yasmin R, Sharma R, Le Comber SC, Verry P, Polly PD. Of mice and mutations: phenotypic effects of the diabetic db/db and ob/ob mutations on the skull and teeth of mice. European Archives of Paediatric Dentistry : Official Journal of the European Academy of Paediatric Dentistry. 9: 37-40. PMID 18328237  1
2008 Polly PD. Developmental dynamics and G-Matrices: Can morphometric spaces be used to model phenotypic evolution? Evolutionary Biology. 35: 83-96. DOI: 10.1007/S11692-008-9020-0  0.01
2008 Polly PD. Foreword Mass Extinction. VII-VIII. DOI: 10.1007/978-3-540-75916-4  0.01
2008 Polly PD, MacLeod N. Locomotion in fossil carnivora: An application of eigensurface analysis for morphometric comparison of 3D surfaces Palaeontologia Electronica. 11.  1
2007 Polly PD. Evolutionary biology: development with a bite. Nature. 449: 413-5. PMID 17898756 DOI: 10.1038/449413A  0.01
2007 Cardini A, Thorington RW, Polly PD. Evolutionary acceleration in the most endangered mammal of Canada: speciation and divergence in the Vancouver Island marmot (Rodentia, Sciuridae). Journal of Evolutionary Biology. 20: 1833-46. PMID 17714301 DOI: 10.1111/j.1420-9101.2007.01398.x  1
2007 Gündüz I, Jaarola M, Tez C, Yeniyurt C, Polly PD, Searle JB. Multigenic and morphometric differentiation of ground squirrels (Spermophilus, Scuiridae, Rodentia) in Turkey, with a description of a new species. Molecular Phylogenetics and Evolution. 43: 916-35. PMID 17500011 DOI: 10.1016/J.Ympev.2007.02.021  1
2007 Head JJ, David Polly P. Dissociation of somatic growth from segmentation drives gigantism in snakes. Biology Letters. 3: 296-8. PMID 17389216 DOI: 10.1098/Rsbl.2007.0069  1
2007 Gündüz I, Jaarola M, Tez C, Yeniyurt C, Polly PD, Searle JB. Spermophilus torosensis Özkurt et al., 2007 (Sciuridae, Rodentia) is a subjective junior synonym of Spermophilus taurensis Gündüz et al., 2007, a newly described ground squirrel from the Taurus Mountains of southern Turkey Zootaxa. 67-68.  1
2006 Wójcik AM, Polly PD, Sikorski MD, Wójcik JM. Selection in a cycling population: differential response among skeletal traits. Evolution; International Journal of Organic Evolution. 60: 1925-35. PMID 17089976 DOI: 10.1111/J.0014-3820.2006.Tb00535.X  0.01
2006 Polly PD. Evolutionary studies: genetics, development, and palaeontology interlock. Heredity. 96: 206-7. PMID 16333300 DOI: 10.1038/sj.hdy.6800778  0.01
2006 Polly PD, Wesley-Hunt GD, Heinrich RE, Davis GR, Houde P. Earliest known carnivoran auditory bulla and support for a recent origin of crown-group Carnivora (eutheria, mammalia) Palaeontology. 49: 1019-1027. DOI: 10.1111/J.1475-4983.2006.00586.X  1
2006 Rychlik L, Ramalhinho G, Polly PD. Response to environmental factors and competition: Skull, mandible and tooth shapes in Polish water shrews (Neomys, Soricidae, Mammalia) Journal of Zoological Systematics and Evolutionary Research. 44: 339-351. DOI: 10.1111/j.1439-0469.2006.00374.x  0.01
2006 Riedel WR, Polly PD, Hagadorn W. Coming of age: ISI and Googling Palaeontologia Electronica. 9.  0.01
2005 Caumul R, Polly PD. Phylogenetic and environmental components of morphological variation: skull, mandible, and molar shape in marmots (Marmota, Rodentia). Evolution; International Journal of Organic Evolution. 59: 2460-72. PMID 16396186 DOI: 10.1111/J.0014-3820.2005.Tb00955.X  0.01
2005 Polly PD. Development and phenotypic correlations: the evolution of tooth shape in Sorex araneus. Evolution & Development. 7: 29-41. PMID 15642087 DOI: 10.1111/J.1525-142X.2005.05004.X  0.01
2005 Polly PD, Springer MS, Luo ZX. Editors' note Journal of Mammalian Evolution. 12: 301-302. DOI: 10.1007/s10914-005-8820-6  1
2005 Polly PD, Lillegraven JA, Luo ZX. Introduction: Paleomammalogy in honor of professor emeritus William Alvin Clemens, Jr. Journal of Mammalian Evolution. 12: 3-8. DOI: 10.1007/S10914-005-6942-5  1
2005 Polly PD, Le Comber SC, Burland TM. On the occlusal fit of tribosphenic molars: Are we underestimating species diversity in the mesozoic? Journal of Mammalian Evolution. 12: 283-299. DOI: 10.1007/S10914-005-4866-8  1
2005 Hagadorn W, Polly PD. From the executive editors Palaeontologia Electronica. 8.  1
2004 Polly PD. On the simulation of the evolution of morphological shape: Multivariate shape under selection and drift Palaeontologia Electronica. 7.  0.01
2003 Polly PD. Paleophylogeography: The tempo of geographic differentiation in marmots (Marmota) Journal of Mammalogy. 84: 369-384. DOI: 10.1644/1545-1542(2003)084<0369:Pttogd>2.0.Co;2  0.01
2003 Polly PD. Paleophylogeography of Sorex araneus (Insectivora, Soricidae): Molar shape as a morphological marker for fossil shrews Mammalia. 67: 233-243.  0.01
2001 Polly PD. Paleontology and the comparative method: ancestral node reconstructions versus observed node values. The American Naturalist. 157: 596-609. PMID 18707277 DOI: 10.1086/320622  0.01
2001 Polly PD. On morphological clocks and paleophylogeography: towards a timescale for Sorex hybrid zones. Genetica. 112: 339-57. PMID 11838775 DOI: 10.1007/978-94-010-0585-2_21  0.01
2001 Kordikova EG, Polly PD, Alifanov VA, Ro?ek Z, Gunnell GF, Averianov AO. Small vertebrates from the late Cretaceous and early tertiary of the northeastern Aral Sea Region, Kazakhstan Journal of Paleontology. 75: 390-400.  0.08
2000 Polly PD. Development and evolution occlude: evolution of development in mammalian teeth. Proceedings of the National Academy of Sciences of the United States of America. 97: 14019-21. PMID 11121009 DOI: 10.1073/Pnas.97.26.14019  0.01
2000 Mathur AK, Polly PD. The evolution of enamel microstructure: How important is amelogenin? Journal of Mammalian Evolution. 7: 23-42.  0.01
1998 Polly PD. Cope's rule. Science (New York, N.Y.). 282: 50-2. PMID 9786796  1
1998 Polly PD. Variability, selection, and constraints: Development and evolution in viverravid (Carnivora, Mammalia) molar morphology Paleobiology. 24: 409-429. DOI: 10.1017/S009483730002008X  0.01
1998 Polly PD. Variability in mammalian dentitions: Size-related bias in the coefficient of variation Biological Journal of the Linnean Society. 64: 83-99. DOI: 10.1006/bijl.1998.0218  0.01
1996 Polly PD. The skeleton of Gazinocyon Vulpeculus Gen. Et Comb. Nov. And the cladistic relationships of Hyaenodontidae (Eutheria, Mammalia) Journal of Vertebrate Paleontology. 16: 303-319.  0.01
1994 Padian K, Lindberg DR, Polly PD. Cladistics and the fossil record: the uses of history Annual Review of Earth & Planetary Sciences. 22: 63-91. DOI: 10.1146/Annurev.Ea.22.050194.000431  1
1993 Polly PD, Lange-Badre B. A new genus Eurotherium (Mammalia, Creodonta) in reference to taxonomic problems with some Eocene hyaenodontids from Eurasia Comptes Rendus - Academie Des Sciences, Serie Ii. 317: 991-996.  0.01
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