Todd J. Barkman - Publications

Affiliations: 
Western Michigan University, Kalamazoo, MI, United States 
Area:
Systematic Biology, Botany Biology, Evolution and Development Biology

25 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Dubs NM, Davis BR, de Brito V, Colebrook KC, Tiefel IJ, Nakayama MB, Huang R, Ledvina AE, Hack SJ, Inkelaar B, Martins TR, Aartila SM, Albritton KS, Almuhanna S, Arnoldi RJ, ... ... Barkman TJ, et al. A collaborative classroom investigation of the evolution of SABATH methyltransferase substrate preference shifts over 120 million years of flowering plant history. Molecular Biology and Evolution. PMID 35021222 DOI: 10.1093/molbev/msac007  0.301
2019 Pedersen HÆ, Petersen G, Gravendeel B, Barkman TJ, Boer H, Sulistyo B, Seberg O. Phylogenetics of Dendrochilum (Orchidaceae): Evidence of pronounced morphological homoplasy and predominantly centric endemism Taxon. 68: 1173-1188. DOI: 10.1002/Tax.12184  0.452
2018 Su HJ, Barkman TJ, Hao W, Jones SS, Naumann J, Skippington E, Wafula EK, Hu JM, Palmer JD, dePamphilis CW. Novel genetic code and record-setting AT-richness in the highly reduced plastid genome of the holoparasitic plant . Proceedings of the National Academy of Sciences of the United States of America. PMID 30598433 DOI: 10.1073/Pnas.1816822116  0.475
2017 Barkman TJ, Klooster MR, Gaddis KD, Franzone B, Calhoun S, Manickam S, Vessabutr S, Sasirat S, Davis CC. Reading between the vines: Hosts as islands for extreme holoparasitic plants. American Journal of Botany. 104: 1382-1389. PMID 29885244 DOI: 10.3732/Ajb.1700117  0.368
2017 Skippington E, Barkman TJ, Rice DW, Palmer JD. Comparative mitogenomics indicates respiratory competence in parasitic Viscum despite loss of complex I and extreme sequence divergence, and reveals horizontal gene transfer and remarkable variation in genome size. Bmc Plant Biology. 17: 49. PMID 28222679 DOI: 10.1186/S12870-017-0992-8  0.413
2016 Huang R, O'Donnell AJ, Barboline JJ, Barkman TJ. Convergent evolution of caffeine in plants by co-option of exapted ancestral enzymes. Proceedings of the National Academy of Sciences of the United States of America. PMID 27638206 DOI: 10.1073/Pnas.1602575113  0.438
2015 Skippington E, Barkman TJ, Rice DW, Palmer JD. Miniaturized mitogenome of the parasitic plant Viscum scurruloideum is extremely divergent and dynamic and has lost all nad genes. Proceedings of the National Academy of Sciences of the United States of America. PMID 26100885 DOI: 10.1073/Pnas.1504491112  0.471
2010 Bendiksby M, Schumacher T, Gussarova G, Nais J, Mat-Salleh K, Sofiyanti N, Madulid D, Smith SA, Barkman T. Elucidating the evolutionary history of the Southeast Asian, holoparasitic, giant-flowered Rafflesiaceae: pliocene vicariance, morphological convergence and character displacement. Molecular Phylogenetics and Evolution. 57: 620-33. PMID 20723606 DOI: 10.1016/J.Ympev.2010.08.005  0.529
2010 Hippauf F, Michalsky E, Huang R, Preissner R, Barkman TJ, Piechulla B. Enzymatic, expression and structural divergences among carboxyl O-methyltransferases after gene duplication and speciation in Nicotiana. Plant Molecular Biology. 72: 311-30. PMID 19936944 DOI: 10.1007/S11103-009-9572-0  0.357
2009 Barkman T, Zhang J. Evidence for escape from adaptive conflict? Nature. 462: E1; discussion E2-3. PMID 20010636 DOI: 10.1038/Nature08663  0.354
2008 Barkman TJ, Bendiksby M, Lim SH, Salleh KM, Nais J, Madulid D, Schumacher T. Accelerated rates of floral evolution at the upper size limit for flowers. Current Biology : Cb. 18: 1508-13. PMID 18848446 DOI: 10.1016/J.Cub.2008.08.046  0.308
2007 Barkman TJ, McNeal JR, Lim SH, Coat G, Croom HB, Young ND, Depamphilis CW. Mitochondrial DNA suggests at least 11 origins of parasitism in angiosperms and reveals genomic chimerism in parasitic plants. Bmc Evolutionary Biology. 7: 248. PMID 18154671 DOI: 10.1186/1471-2148-7-248  0.443
2007 Barkman TJ, Martins TR, Sutton E, Stout JT. Positive selection for single amino acid change promotes substrate discrimination of a plant volatile-producing enzyme. Molecular Biology and Evolution. 24: 1320-9. PMID 17374877 DOI: 10.1093/Molbev/Msm053  0.343
2007 Martins TR, Stout JT, Todd SE, Kuipers K, Barkman TJ. Molecular phylogenetic tests of floral scent evolution in the solanaceae Acta Horticulturae. 745: 183-200.  0.363
2006 Barkman TJ. A role for evolutionary predictions in gene isolation and characterization studies Journal of Plant Biology. 49: 331-335. DOI: 10.1007/Bf03031165  0.475
2005 Martins TR, Barkman TJ. Reconstruction of Solanaceae phylogeny using the nuclear gene SAMT Systematic Botany. 30: 435-447. DOI: 10.1600/0363644054223675  0.498
2004 Tan WG, Barkman TJ, Gregory Chinchar V, Essani K. Comparative genomic analyses of frog virus 3, type species of the genus Ranavirus (family Iridoviridae). Virology. 323: 70-84. PMID 15165820 DOI: 10.1016/J.Virol.2004.02.019  0.519
2004 Barkman TJ, Lim SH, Salleh KM, Nais J. Mitochondrial DNA sequences reveal the photosynthetic relatives of Rafflesia, the world's largest flower. Proceedings of the National Academy of Sciences of the United States of America. 101: 787-92. PMID 14715901 DOI: 10.1073/Pnas.0305562101  0.549
2003 Barkman TJ. Evidence for positive selection on the floral scent gene isoeugenol-O-methyltransferase. Molecular Biology and Evolution. 20: 168-72. PMID 12598682 DOI: 10.1093/Molbev/Msg030  0.306
2003 Barkman TJ, Emoi BE, Repin R. The genus Balanophora (Balanophoraceae) in Sabah, Malaysia Blumea: Journal of Plant Taxonomy and Plant Geography. 48: 465-474. DOI: 10.3767/000651903X489410  0.431
2002 Stahlhut JK, Cowan DP, Essani K, Dewayne Shoemaker D, Barkman TJ. Microsatellite markers for the wasp Euodynerus foraminatus (Vespidae: Eumeninae) Molecular Ecology Notes. 2: 467-468. DOI: 10.1046/J.1471-8286.2002.00280.X  0.408
2002 Barkman TJ, Simpson BB. Hybrid origin and parentage of Dendrochilum acuiferum (Orchidaceae) inferred in a phylogenetic context using nuclear and plastid DNA sequence data Systematic Botany. 27: 209-220. DOI: 10.1043/0363-6445-27.2.209  0.587
2001 Barkman TJ. Character coding of secondary chemical variation for use in phylogenetic analyses Biochemical Systematics and Ecology. 29: 1-20. DOI: 10.1016/S0305-1978(00)00031-4  0.362
2001 Barkman TJ, Simpson BB. Origin of high-elevation Dendrochilum species (Orchidaceae) endemic to Mount Kinabalu, Sabah, Malaysia Systematic Botany. 26: 658-669.  0.421
2000 Barkman TJ, Chenery G, McNeal JR, Lyons-Weiler J, Ellisens WJ, Moore G, Wolfe AD, dePamphilis CW. Independent and combined analyses of sequences from all three genomic compartments converge on the root of flowering plant phylogeny. Proceedings of the National Academy of Sciences of the United States of America. 97: 13166-71. PMID 11069280 DOI: 10.1073/Pnas.220427497  0.52
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