| Year |
Citation |
Score |
| 2020 |
Ianiri G, Coelho MA, Ruchti F, Sparber F, McMahon TJ, Fu C, Bolejack M, Donovan O, Smutney H, Myler P, Dietrich F, Fox D, LeibundGut-Landmann S, Heitman J. HGT in the human and skin commensal : A bacterially derived flavohemoglobin is required for NO resistance and host interaction. Proceedings of the National Academy of Sciences of the United States of America. PMID 32576698 DOI: 10.1073/Pnas.2003473117 |
0.443 |
|
| 2019 |
Armaleo D, Müller O, Lutzoni F, Andrésson ÓS, Blanc G, Bode HB, Collart FR, Dal Grande F, Dietrich F, Grigoriev IV, Joneson S, Kuo A, Larsen PE, Logsdon JM, Lopez D, et al. The lichen symbiosis re-viewed through the genomes of Cladonia grayi and its algal partner Asterochloris glomerata. Bmc Genomics. 20: 605. PMID 31337355 DOI: 10.1186/S12864-019-5629-X |
0.387 |
|
| 2015 |
Strope PK, Skelly DA, Kozmin SG, Mahadevan G, Stone EA, Magwene PM, Dietrich FS, McCusker JH. The 100-genomes strains, an S. cerevisiae resource that illuminates its natural phenotypic and genotypic variation and emergence as an opportunistic pathogen. Genome Research. 25: 762-74. PMID 25840857 DOI: 10.1101/Gr.185538.114 |
0.366 |
|
| 2014 |
Zhao Y, Strope PK, Kozmin SG, McCusker JH, Dietrich FS, Kokoska RJ, Petes TD. Structures of naturally evolved CUP1 tandem arrays in yeast indicate that these arrays are generated by unequal nonhomologous recombination. G3 (Bethesda, Md.). 4: 2259-69. PMID 25236733 DOI: 10.1534/G3.114.012922 |
0.38 |
|
| 2014 |
Janbon G, Ormerod KL, Paulet D, Byrnes EJ, Yadav V, Chatterjee G, Mullapudi N, Hon CC, Billmyre RB, Brunel F, Bahn YS, Chen W, Chen Y, Chow EW, Coppée JY, ... ... Dietrich FS, et al. Analysis of the genome and transcriptome of Cryptococcus neoformans var. grubii reveals complex RNA expression and microevolution leading to virulence attenuation. Plos Genetics. 10: e1004261. PMID 24743168 DOI: 10.1371/Journal.Pgen.1004261 |
0.65 |
|
| 2014 |
Engel SR, Dietrich FS, Fisk DG, Binkley G, Balakrishnan R, Costanzo MC, Dwight SS, Hitz BC, Karra K, Nash RS, Weng S, Wong ED, Lloyd P, Skrzypek MS, Miyasato SR, et al. The reference genome sequence of Saccharomyces cerevisiae: then and now. G3 (Bethesda, Md.). 4: 389-98. PMID 24374639 DOI: 10.1534/g3.113.008995 |
0.352 |
|
| 2013 |
Froyd CA, Kapoor S, Dietrich F, Rusche LN. The deacetylase Sir2 from the yeast Clavispora lusitaniae lacks the evolutionarily conserved capacity to generate subtelomeric heterochromatin. Plos Genetics. 9: e1003935. PMID 24204326 DOI: 10.1371/Journal.Pgen.1003935 |
0.395 |
|
| 2013 |
Martin MD, Cappellini E, Samaniego JA, Zepeda ML, Campos PF, Seguin-Orlando A, Wales N, Orlando L, Ho SY, Dietrich FS, Mieczkowski PA, Heitman J, Willerslev E, Krogh A, Ristaino JB, et al. Reconstructing genome evolution in historic samples of the Irish potato famine pathogen. Nature Communications. 4: 2172. PMID 23863894 DOI: 10.1038/Ncomms3172 |
0.383 |
|
| 2013 |
Dietrich FS, Voegeli S, Kuo S, Philippsen P. Genomes of Ashbya fungi isolated from insects reveal four mating-type loci, numerous translocations, lack of transposons, and distinct gene duplications. G3 (Bethesda, Md.). 3: 1225-39. PMID 23749448 DOI: 10.1534/g3.112.002881 |
0.43 |
|
| 2013 |
McDonald TR, Mueller O, Dietrich FS, Lutzoni F. High-throughput genome sequencing of lichenizing fungi to assess gene loss in the ammonium transporter/ammonia permease gene family. Bmc Genomics. 14: 225. PMID 23557360 DOI: 10.1186/1471-2164-14-225 |
0.341 |
|
| 2013 |
O'Meara TR, Holmer SM, Selvig K, Dietrich F, Alspaugh JA. Cryptococcus neoformans Rim101 is associated with cell wall remodeling and evasion of the host immune responses. Mbio. 4. PMID 23322637 DOI: 10.1128/Mbio.00522-12 |
0.318 |
|
| 2012 |
Findley K, Sun S, Fraser JA, Hsueh YP, Averette AF, Li W, Dietrich FS, Heitman J. Discovery of a modified tetrapolar sexual cycle in Cryptococcus amylolentus and the evolution of MAT in the Cryptococcus species complex. Plos Genetics. 8: e1002528. PMID 22359516 DOI: 10.1371/Journal.Pgen.1002528 |
0.338 |
|
| 2012 |
St Charles J, Hazkani-Covo E, Yin Y, Andersen SL, Dietrich FS, Greenwell PW, Malc E, Mieczkowski P, Petes TD. High-resolution genome-wide analysis of irradiated (UV and γ-rays) diploid yeast cells reveals a high frequency of genomic loss of heterozygosity (LOH) events. Genetics. 190: 1267-84. PMID 22267500 DOI: 10.1534/Genetics.111.137927 |
0.303 |
|
| 2011 |
Diezmann S, Dietrich FS. Oxidative stress survival in a clinical Saccharomyces cerevisiae isolate is influenced by a major quantitative trait nucleotide. Genetics. 188: 709-22. PMID 21515583 DOI: 10.1534/Genetics.111.128256 |
0.734 |
|
| 2010 |
Stajich JE, Wilke SK, Ahrén D, Au CH, Birren BW, Borodovsky M, Burns C, Canbäck B, Casselton LA, Cheng CK, Deng J, Dietrich FS, Fargo DC, Farman ML, Gathman AC, et al. Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus). Proceedings of the National Academy of Sciences of the United States of America. 107: 11889-94. PMID 20547848 DOI: 10.1073/Pnas.1003391107 |
0.614 |
|
| 2010 |
Lee SC, Corradi N, Doan S, Dietrich FS, Keeling PJ, Heitman J. Evolution of the sex-related locus and genomic features shared in microsporidia and fungi. Plos One. 5: e10539. PMID 20479876 DOI: 10.1371/Journal.Pone.0010539 |
0.459 |
|
| 2010 |
Rodriguez-Carres M, Findley K, Sun S, Dietrich FS, Heitman J. Morphological and genomic characterization of Filobasidiella depauperata: a homothallic sibling species of the pathogenic cryptococcus species complex. Plos One. 5: e9620. PMID 20224779 DOI: 10.1371/Journal.Pone.0009620 |
0.34 |
|
| 2009 |
Argueso JL, Carazzolle MF, Mieczkowski PA, Duarte FM, Netto OV, Missawa SK, Galzerani F, Costa GG, Vidal RO, Noronha MF, Dominska M, Andrietta MG, Andrietta SR, Cunha AF, Gomes LH, ... ... Dietrich FS, et al. Genome structure of a Saccharomyces cerevisiae strain widely used in bioethanol production. Genome Research. 19: 2258-70. PMID 19812109 DOI: 10.1101/Gr.091777.109 |
0.396 |
|
| 2009 |
Diezmann S, Dietrich FS. Saccharomyces cerevisiae: population divergence and resistance to oxidative stress in clinical, domesticated and wild isolates. Plos One. 4: e5317. PMID 19390633 DOI: 10.1371/Journal.Pone.0005317 |
0.748 |
|
| 2009 |
Kavanaugh LA, Dietrich FS. Non-coding RNA prediction and verification in Saccharomyces cerevisiae. Plos Genetics. 5: e1000321. PMID 19119416 DOI: 10.1371/Journal.Pgen.1000321 |
0.731 |
|
| 2008 |
Lee SC, Corradi N, Byrnes EJ, Torres-Martinez S, Dietrich FS, Keeling PJ, Heitman J. Microsporidia evolved from ancestral sexual fungi. Current Biology : Cb. 18: 1675-9. PMID 18976912 DOI: 10.1016/J.Cub.2008.09.030 |
0.446 |
|
| 2008 |
Hu G, Liu I, Sham A, Stajich JE, Dietrich FS, Kronstad JW. Comparative hybridization reveals extensive genome variation in the AIDS-associated pathogen Cryptococcus neoformans. Genome Biology. 9: R41. PMID 18294377 DOI: 10.1186/Gb-2008-9-2-R41 |
0.602 |
|
| 2007 |
Hall C, Dietrich FS. The reacquisition of biotin prototrophy in Saccharomyces cerevisiae involved horizontal gene transfer, gene duplication and gene clustering. Genetics. 177: 2293-307. PMID 18073433 DOI: 10.1534/Genetics.107.074963 |
0.573 |
|
| 2007 |
Luedi PP, Dietrich FS, Weidman JR, Bosko JM, Jirtle RL, Hartemink AJ. Computational and experimental identification of novel human imprinted genes. Genome Research. 17: 1723-30. PMID 18055845 DOI: 10.1101/Gr.6584707 |
0.743 |
|
| 2007 |
Stajich JE, Dietrich FS, Roy SW. Comparative genomic analysis of fungal genomes reveals intron-rich ancestors. Genome Biology. 8: R223. PMID 17949488 DOI: 10.1186/Gb-2007-8-10-R223 |
0.614 |
|
| 2007 |
Wei W, McCusker JH, Hyman RW, Jones T, Ning Y, Cao Z, Gu Z, Bruno D, Miranda M, Nguyen M, Wilhelmy J, Komp C, Tamse R, Wang X, Jia P, ... ... Dietrich FS, et al. Genome sequencing and comparative analysis of Saccharomyces cerevisiae strain YJM789. Proceedings of the National Academy of Sciences of the United States of America. 104: 12825-30. PMID 17652520 DOI: 10.1073/Pnas.0701291104 |
0.691 |
|
| 2007 |
Harrison LB, Yu Z, Stajich JE, Dietrich FS, Harrison PM. Evolution of budding yeast prion-determinant sequences across diverse fungi. Journal of Molecular Biology. 368: 273-82. PMID 17320905 DOI: 10.1016/J.Jmb.2007.01.070 |
0.491 |
|
| 2007 |
Gattiker A, Rischatsch R, Demougin P, Voegeli S, Dietrich FS, Philippsen P, Primig M. Ashbya Genome Database 3.0: a cross-species genome and transcriptome browser for yeast biologists. Bmc Genomics. 8: 9. PMID 17212814 DOI: 10.1186/1471-2164-8-9 |
0.386 |
|
| 2006 |
Giles SS, Stajich JE, Nichols C, Gerrald QD, Alspaugh JA, Dietrich F, Perfect JR. The Cryptococcus neoformans catalase gene family and its role in antioxidant defense. Eukaryotic Cell. 5: 1447-59. PMID 16963629 DOI: 10.1128/Ec.00098-06 |
0.578 |
|
| 2006 |
Cramer RA, Stajich JE, Yamanaka Y, Dietrich FS, Steinbach WJ, Perfect JR. Phylogenomic analysis of non-ribosomal peptide synthetases in the genus Aspergillus. Gene. 383: 24-32. PMID 16962256 DOI: 10.1016/J.Gene.2006.07.008 |
0.549 |
|
| 2006 |
Kavanaugh LA, Fraser JA, Dietrich FS. Recent evolution of the human pathogen Cryptococcus neoformans by intervarietal transfer of a 14-gene fragment. Molecular Biology and Evolution. 23: 1879-90. PMID 16870684 DOI: 10.1093/Molbev/Msl070 |
0.754 |
|
| 2006 |
Fraser JA, Lim SM, Diezmann S, Wenink EC, Arndt CG, Cox GM, Dietrich FS, Heitman J. Yeast diversity sampling on the San Juan Islands reveals no evidence for the spread of the Vancouver Island Cryptococcus gattii outbreak to this locale. Fems Yeast Research. 6: 620-4. PMID 16696658 DOI: 10.1111/J.1567-1364.2006.00075.X |
0.729 |
|
| 2006 |
Stajich JE, Dietrich FS. Evidence of mRNA-mediated intron loss in the human-pathogenic fungus Cryptococcus neoformans. Eukaryotic Cell. 5: 789-93. PMID 16682456 DOI: 10.1128/Ec.5.5.789-793.2006 |
0.585 |
|
| 2006 |
Brachat S, Dietrich F, Voegeli S, Gaffney T, Philippsen P. The genome of the filamentous fungus ashbya gossypii: Annotation and evolutionary implications Topics in Current Genetics. 15: 197-232. DOI: 10.1007/4735_114 |
0.311 |
|
| 2005 |
Fraser JA, Giles SS, Wenink EC, Geunes-Boyer SG, Wright JR, Diezmann S, Allen A, Stajich JE, Dietrich FS, Perfect JR, Heitman J. Same-sex mating and the origin of the Vancouver Island Cryptococcus gattii outbreak. Nature. 437: 1360-4. PMID 16222245 DOI: 10.1038/Nature04220 |
0.75 |
|
| 2005 |
Campbell LT, Fraser JA, Nichols CB, Dietrich FS, Carter D, Heitman J. Clinical and environmental isolates of Cryptococcus gattii from Australia that retain sexual fecundity. Eukaryotic Cell. 4: 1410-9. PMID 16087746 DOI: 10.1128/Ec.4.8.1410-1419.2005 |
0.416 |
|
| 2005 |
Zhang Z, Dietrich FS. Identification and characterization of upstream open reading frames (uORF) in the 5' untranslated regions (UTR) of genes in Saccharomyces cerevisiae. Current Genetics. 48: 77-87. PMID 16012843 DOI: 10.1007/S00294-005-0001-X |
0.495 |
|
| 2005 |
Noureddine MA, Li YJ, van der Walt JM, Walters R, Jewett RM, Xu H, Wang T, Walter JW, Scott BL, Hulette C, Schmechel D, Stenger JE, Dietrich F, Vance JM, Hauser MA. Genomic convergence to identify candidate genes for Parkinson disease: SAGE analysis of the substantia nigra. Movement Disorders : Official Journal of the Movement Disorder Society. 20: 1299-309. PMID 15966006 DOI: 10.1002/Mds.20573 |
0.355 |
|
| 2005 |
Hall C, Brachat S, Dietrich FS. Contribution of horizontal gene transfer to the evolution of Saccharomyces cerevisiae. Eukaryotic Cell. 4: 1102-15. PMID 15947202 DOI: 10.1128/Ec.4.6.1102-1115.2005 |
0.628 |
|
| 2005 |
Zhang Z, Dietrich FS. Mapping of transcription start sites in Saccharomyces cerevisiae using 5' SAGE. Nucleic Acids Research. 33: 2838-51. PMID 15905473 DOI: 10.1093/Nar/Gki583 |
0.447 |
|
| 2004 |
Fraser JA, Diezmann S, Subaran RL, Allen A, Lengeler KB, Dietrich FS, Heitman J. Convergent evolution of chromosomal sex-determining regions in the animal and fungal kingdoms. Plos Biology. 2: e384. PMID 15538538 DOI: 10.1371/Journal.Pbio.0020384 |
0.762 |
|
| 2004 |
Kraus PR, Boily MJ, Giles SS, Stajich JE, Allen A, Cox GM, Dietrich FS, Perfect JR, Heitman J. Identification of Cryptococcus neoformans temperature-regulated genes with a genomic-DNA microarray. Eukaryotic Cell. 3: 1249-60. PMID 15470254 DOI: 10.1128/Ec.3.5.1249-1260.2004 |
0.561 |
|
| 2004 |
Weidman JR, Murphy SK, Nolan CM, Dietrich FS, Jirtle RL. Phylogenetic footprint analysis of IGF2 in extant mammals. Genome Research. 14: 1726-32. PMID 15342558 DOI: 10.1101/Gr.2774804 |
0.737 |
|
| 2004 |
Toffaletti DL, Nielsen K, Dietrich F, Heitman J, Perfect JR. Cryptococcus neoformans mitochondrial genomes from serotype A and D strains do not influence virulence. Current Genetics. 46: 193-204. PMID 15309505 DOI: 10.1007/S00294-004-0521-9 |
0.382 |
|
| 2004 |
Resch G, Kulik EM, Dietrich FS, Meyer J. Complete genomic nucleotide sequence of the temperate bacteriophage Aa Phi 23 of Actinobacillus actinomycetemcomitans. Journal of Bacteriology. 186: 5523-8. PMID 15292156 DOI: 10.1128/JB.186.16.5523-5528.2004 |
0.322 |
|
| 2004 |
Dietrich FS, Voegeli S, Brachat S, Lerch A, Gates K, Steiner S, Mohr C, Pöhlmann R, Luedi P, Choi S, Wing RA, Flavier A, Gaffney TD, Philippsen P. The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome. Science (New York, N.Y.). 304: 304-7. PMID 15001715 DOI: 10.1126/Science.1095781 |
0.429 |
|
| 2003 |
Brachat S, Dietrich FS, Voegeli S, Zhang Z, Stuart L, Lerch A, Gates K, Gaffney T, Philippsen P. Reinvestigation of the Saccharomyces cerevisiae genome annotation by comparison to the genome of a related fungus: Ashbya gossypii. Genome Biology. 4: R45. PMID 12844361 DOI: 10.1186/Gb-2003-4-7-R45 |
0.544 |
|
| 2003 |
Zhang Z, Dietrich FS. Verification of a new gene on Saccharomyces cerevisiae chromosome III. Yeast (Chichester, England). 20: 731-8. PMID 12794934 DOI: 10.1002/Yea.996 |
0.518 |
|
| 2003 |
Toffaletti DL, Del Poeta M, Rude TH, Dietrich F, Perfect JR. Regulation of cytochrome c oxidase subunit 1 (COX1) expression in Cryptococcus neoformans by temperature and host environment. Microbiology (Reading, England). 149: 1041-9. PMID 12686646 DOI: 10.1099/Mic.0.26021-0 |
0.375 |
|
| 2003 |
Hauser MA, Li YJ, Takeuchi S, Walters R, Noureddine M, Maready M, Darden T, Hulette C, Martin E, Hauser E, Xu H, Schmechel D, Stenger JE, Dietrich F, Vance J. Genomic convergence: identifying candidate genes for Parkinson's disease by combining serial analysis of gene expression and genetic linkage. Human Molecular Genetics. 12: 671-7. PMID 12620972 DOI: 10.1093/Hmg/Ddg070 |
0.453 |
|
| 1999 |
Wendland J, Pöhlmann R, Dietrich F, Steiner S, Mohr C, Philippsen P. Compact organization of rRNA genes in the filamentous fungus Ashbya gossypii. Current Genetics. 35: 618-25. PMID 10467006 DOI: 10.1007/S002940050460 |
0.467 |
|
| 1999 |
Winzeler EA, Shoemaker DD, Astromoff A, Liang H, Anderson K, Andre B, Bangham R, Benito R, Boeke JD, Bussey H, Chu AM, Connelly C, Davis K, Dietrich F, Dow SW, et al. Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis. Science (New York, N.Y.). 285: 901-6. PMID 10436161 DOI: 10.1126/Science.285.5429.901 |
0.782 |
|
| 1997 |
Bussey H, Storms RK, Ahmed A, Albermann K, Allen E, Ansorge W, Araujo R, Aparicio A, Barrell B, Badcock K, Benes V, Botstein D, Bowman S, Brückner M, Carpenter J, ... ... Dietrich FS, et al. The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI. Nature. 387: 103-5. PMID 9169875 |
0.535 |
|
| 1997 |
Dietrich FS, Mulligan J, Hennessy K, Yelton MA, Allen E, Araujo R, Aviles E, Berno A, Brennan T, Carpenter J, Chen E, Cherry JM, Chung E, Duncan M, Guzman E, et al. The nucleotide sequence of Saccharomyces cerevisiae chromosome V. Nature. 387: 78-81. PMID 9169868 |
0.515 |
|
| 1997 |
Jacq C, Alt-Mörbe J, Andre B, Arnold W, Bahr A, Ballesta JPG, Bargues M, Baron L, Becker A, Biteau N, Blöcker H, Blugeon C, Boskovic J, Brandt P, Brückner M, ... ... Dietrich FS, et al. The nucleotide sequence of Saccharomyces cerevisiae chromosome IV Nature. 387: 75-78. PMID 9169867 |
0.35 |
|
| 1996 |
Oefner PJ, Hunicke-Smith SP, Chiang L, Dietrich F, Mulligan J, Davis RW. Efficient random subcloning of DNA sheared in a recirculating point-sink flow system. Nucleic Acids Research. 24: 3879-86. PMID 8918787 DOI: 10.1093/Nar/24.20.3879 |
0.442 |
|
| 1993 |
Christman MF, Dietrich FS, Levin NA, Sadoff BU, Fink GR. The rRNA-encoding DNA array has an altered structure in topoisomerase I mutants of Saccharomyces cerevisiae. Proceedings of the National Academy of Sciences of the United States of America. 90: 7637-41. PMID 8395051 DOI: 10.1073/Pnas.90.16.7637 |
0.464 |
|
| 1988 |
Christman MF, Dietrich FS, Fink GR. Mitotic recombination in the rDNA of S. cerevisiae is suppressed by the combined action of DNA topoisomerases I and II. Cell. 55: 413-25. PMID 2902925 DOI: 10.1016/0092-8674(88)90027-X |
0.484 |
|
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