John Conery - Publications

Department of Computer and Information Science University of Oregon, Eugene, OR, United States 
Computer Science, Evolution and Development Biology, Molecular Biology

25/30 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2012 Conery JS. Computation is symbol manipulation Computer Journal. 55: 814-816. DOI: 10.1093/comjnl/bxs068  0.48
2009 Catchen JM, Conery JS, Postlethwait JH. Automated identification of conserved synteny after whole-genome duplication. Genome Research. 19: 1497-505. PMID 19465509 DOI: 10.1101/Gr.090480.108  0.48
2008 Catchen JM, Conery JS, Postlethwait JH. Inferring ancestral gene order. Methods in Molecular Biology (Clifton, N.J.). 452: 365-83. PMID 18566773 DOI: 10.1007/978-1-60327-159-2_17  0.48
2007 Conery JS. Aligning sequences by minimum description length. Eurasip Journal On Bioinformatics & Systems Biology. 72936. PMID 18274649 DOI: 10.1155/2007/72936  0.48
2007 Dunn NA, Conery JS, Lockery SR. Circuit motifs for spatial orientation behaviors identified by neural network optimization. Journal of Neurophysiology. 98: 888-97. PMID 17522174 DOI: 10.1152/Jn.00074.2007  0.48
2007 Saks ME, Conery JS. Anticodon-dependent conservation of bacterial tRNA gene sequences. Rna (New York, N.Y.). 13: 651-60. PMID 17379816 DOI: 10.1261/rna.345907  0.48
2006 Dunn NA, Pierce-Shimomura JT, Conery JS, Lockery SR. Clustered neural dynamics identify motifs for chemotaxis in caenorhabditis elegans Ieee International Conference On Neural Networks - Conference Proceedings. 547-554.  0.48
2005 Conery JS, Catchen JM, Lynch M. Rule-based workflow management for bioinformatics Vldb Journal. 14: 318-329. DOI: 10.1007/s00778-005-0153-9  0.48
2004 Dunn NA, Lockery SR, Pierce-Shimomura JT, Conery JS. A neural network model of chemotaxis predicts functions of synaptic connections in the nematode Caenorhabditis elegans. Journal of Computational Neuroscience. 17: 137-47. PMID 15306736 DOI: 10.1023/B:Jcns.0000037679.42570.D5  0.48
2004 Vinogradov AE, Lynch M, Conery JS. Testing Genome Complexity [4] (multiple letters) Science. 304: 389-390. PMID 15087529  0.48
2004 Dunn NA, Conery JS, Lockery SR. Circuit optimization predicts dynamic networks for chemosensory orientation in the nematode Caenorhabditis elegans Advances in Neural Information Processing Systems 0.48
2003 Lynch M, Conery JS. The Origins of Genome Complexity Science. 302: 1401-1404. PMID 14631042 DOI: 10.1126/Science.1089370  0.48
2003 Lynch M, Conery JS. The evolutionary demography of duplicate genes Journal of Structural and Functional Genomics. 3: 35-44. PMID 12836683 DOI: 10.1023/A:1022696612931  0.48
2003 May HK, Conery JS. FOREST: A system for developing and evaluating ecosystem simulation models Simulation Series. 35: 119-127.  0.48
2003 Dunn NA, Conery JS, Lockery SR. A Neural Network Model for Chemotaxis in Caenorhabditis elegans Proceedings of the International Joint Conference On Neural Networks. 4: 2574-2578.  0.48
2001 Conery JS, Lynch M. Nucleotide substitutions and the evolution of duplicate genes Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 167-178. PMID 11262937  0.48
2000 Lynch M, Conery JS. The evolutionary fate and consequences of duplicate genes Science. 290: 1151-1155. PMID 11073452 DOI: 10.1126/Science.290.5494.1151  0.48
1999 Conery JS, Lynch M. Genetic Simulation Library Bioinformatics. 15: 85-86. PMID 10068695 DOI: 10.1093/Bioinformatics/15.1.85  0.48
1995 Lynch M, Conery J, Bürger R. MUTATIONAL MELTDOWNS IN SEXUAL POPULATIONS. Evolution; International Journal of Organic Evolution. 49: 1067-1080. PMID 28568521 DOI: 10.1111/J.1558-5646.1995.Tb04434.X  0.48
1995 Lynch M, Conery J, Burger R. Mutation accumulation and the extinction of small populations American Naturalist. 146: 489-518. DOI: 10.1086/285812  0.48
1995 Lynch M, Conery J, Burger R. Mutational meltdowns in sexual populations Evolution. 49: 1067-1080.  0.48
1994 Conery JS. Continuation-based control in the implementation of parallel logic programs Lisp and Symbolic Computation. 7: 111-133. DOI: 10.1007/BF01019947  0.48
1992 Conery JS. Parallel logic programs on the Mayfly Lisp and Symbolic Computation. 5: 49-72. DOI: 10.1007/BF01811116  0.48
1988 Conery JS. Binding environments for parallel logic programs in non-shared memory multiprocessors International Journal of Parallel Programming. 17: 125-152. DOI: 10.1007/BF01383953  0.48
1985 Conery JS, Kibler DF. AND parallelism and nondeterminism in logic programs New Generation Computing. 3: 43-70. DOI: 10.1007/Bf03037115  0.48
Low-probability matches
2019 Sweeney EG, Nishida A, Weston A, Bañuelos MS, Potter K, Conery J, Guillemin K. Agent-Based Modeling Demonstrates How Local Chemotactic Behavior Can Shape Biofilm Architecture. Msphere. 4. PMID 31142622 DOI: 10.1128/mSphere.00285-19  0.01
2010 Conery JS. Ubiquity symposium 'What is computation?' Ubiquity. 2010: 4. DOI: 10.1145/1880066.1889839  0.01
2007 Chlup PH, Conery J, Stewart GG. Detection of mannan from Saccharomyces cerevisiae by flow cytometry Journal of the American Society of Brewing Chemists. 65: 151-156. DOI: 10.1094/ASBCJ-2007-0620-01  0.01
2004 Lynch M. Response to Comment on "The Origins of Genome Complexity" Science. 306: 978b-978b. DOI: 10.1126/Science.1100559  0.01
1997 Glass K, Livingston M, Conery J. Distributed simulation of spatially explicit ecological models Acm Sigsim Simulation Digest. 27: 60-63. DOI: 10.1145/268823.268902  0.01
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