Louise A. Lewis - Publications

Affiliations: 
University of Connecticut, Storrs, CT, United States 
Area:
Evolution and Development Biology, Systematic Biology, Molecular Biology

60 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Fučíková K, Lewis PO, Neupane S, Karol KG, Lewis LA. Order, please! Uncertainty in the ordinal-level classification of Chlorophyceae. Peerj. 7: e6899. PMID 31143537 DOI: 10.7717/Peerj.6899  0.4
2019 Neupane S, Fucíková K, Lewis LA, Kuo L, Chen MH, Lewis PO. Assessing Combinability of Phylogenomic Data using Bayes Factors. Systematic Biology. PMID 30726954 DOI: 10.1093/Sysbio/Syz007  0.36
2018 McManus HA, Fučíková K, Lewis PO, Lewis LA, Karol KG. Organellar phylogenomics inform systematics in the green algal family Hydrodictyaceae (Chlorophyceae) and provide clues to the complex evolutionary history of plastid genomes in the green algal tree of life. American Journal of Botany. PMID 29722901 DOI: 10.1002/Ajb2.1066  1
2016 Watanabe S, Fučíková K, Lewis LA, Lewis PO. Hiding in plain sight: Koshicola spirodelophila gen. et sp. nov. (Chaetopeltidales, Chlorophyceae), a novel green alga associated with the aquatic angiosperm Spirodela polyrhiza. American Journal of Botany. 103: 865-75. PMID 27208355 DOI: 10.3732/Ajb.1500481  0.4
2016 Lewis PO, Chen MH, Kuo L, Lewis LA, Fučíková K, Neupane S, Wang YB, Shi D. Estimating Bayesian Phylogenetic Information Content. Systematic Biology. PMID 27155008 DOI: 10.1093/Sysbio/Syw042  0.4
2016 Fučíková K, Lewis LA, Lewis PO. Comparative analyses of chloroplast genome data representing nine green algae in Sphaeropleales (Chlorophyceae, Chlorophyta). Data in Brief. 7: 558-70. PMID 27054159 DOI: 10.1016/J.Dib.2016.03.014  0.4
2016 Fučíková K, Lewis PO, Lewis LA. Chloroplast phylogenomic data from the green algal order Sphaeropleales (Chlorophyceae, Chlorophyta) reveal complex patterns of sequence evolution. Molecular Phylogenetics and Evolution. PMID 26903036 DOI: 10.1016/J.Ympev.2016.01.022  1
2016 Watanabe S, Fučíková K, Lewis LA, Lewis PO. Hiding in plain sight: Koshicola spirodelophila gen. et sp. nov. (Chaetopeltidales, Chlorophyceae), a novel green alga associated with the aquatic angiosperm Spirodela polyrhiza American Journal of Botany. 103: 865-875. DOI: 10.3732/ajb.150048  1
2016 Fučíková K, Lewis LA, Lewis PO. Comparative analyses of chloroplast genome data representing nine green algae in Sphaeropleales (Chlorophyceae, Chlorophyta) Data in Brief. 7: 558-570. DOI: 10.1016/j.dib.2016.03.014  1
2015 Sciuto K, Lewis LA, Verleyen E, Moro I, La Rocca N. Chodatodesmus australis sp. nov. (Scenedesmaceae, Chlorophyta) from Antarctica, with the emended description of the genus Chodatodesmus, and circumscription of Flechtneria rotunda gen. et sp. nov. Journal of Phycology. 51: 1172-88. PMID 26987011 DOI: 10.1111/Jpy.12355  1
2015 Herburger K, Lewis LA, Holzinger A. Photosynthetic efficiency, desiccation tolerance and ultrastructure in two phylogenetically distinct strains of alpine Zygnema sp. (Zygnematophyceae, Streptophyta): role of pre-akinete formation. Protoplasma. 252: 571-89. PMID 25269628 DOI: 10.1007/S00709-014-0703-3  1
2015 Urban MC, Lewis LA, Fučíková K, Cordone A. Population of origin and environment interact to determine oomycete infections in spotted salamander populations Oikos. 124: 274-284. DOI: 10.1111/Oik.01598  1
2015 Holzinger A, Herburger K, Kaplan F, Lewis LA. Desiccation tolerance in the chlorophyte green alga Ulva compressa: does cell wall architecture contribute to ecological success? Planta. 242: 477-492. DOI: 10.1007/s00425-015-2292-6  1
2014 Fučíková K, Lewis PO, Lewis LA. Putting incertae sedis taxa in their place: a proposal for ten new families and three new genera in Sphaeropleales (Chlorophyceae, Chlorophyta). Journal of Phycology. 50: 14-25. PMID 26988005 DOI: 10.1111/Jpy.12118  0.4
2014 Stancheva R, Hall JD, Herburger K, Lewis LA, McCourt RM, Sheath RG, Holzinger A. PHYLOGENETIC POSITION OF ZYGOGONIUM ERICETORUM (ZYGNEMATOPHYCEAE, CHAROPHYTA) FROM A HIGH ALPINE HABITAT AND ULTRASTRUCTURAL CHARACTERIZATION OF UNUSUAL APLANOSPORES. Journal of Phycology. 50: 790-803. PMID 25810560 DOI: 10.1111/Jpy.12229  1
2014 Fučíková K, Lewis PO, González-Halphen D, Lewis LA. Gene arrangement convergence, diverse intron content, and genetic code modifications in mitochondrial genomes of sphaeropleales (chlorophyta). Genome Biology and Evolution. 6: 2170-80. PMID 25106621 DOI: 10.1093/Gbe/Evu172  1
2014 Fu?íková K, Lewis PO, Lewis LA. Widespread desert affiliation of trebouxiophycean algae (Trebouxiophyceae, Chlorophyta) including discovery of three new desert genera Phycological Research. DOI: 10.1111/Pre.12062  1
2014 Graham LE, Knack JJ, Piotrowski MJ, Wilcox LW, Cook ME, Wellman CH, Taylor W, Lewis LA, Arancibia-Avila P. Lacustrine Nostoc (Nostocales) and associated microbiome generate a new type of modern clotted microbialite Journal of Phycology. 50: 280-291. DOI: 10.1111/jpy.12152  1
2014 Fu?íková K, Lewis PO, Lewis LA. Putting incertae sedis taxa in their place: A proposal for ten new families and three new genera in Sphaeropleales (Chlorophyceae, Chlorophyta) Journal of Phycology. 50: 14-25. DOI: 10.1111/jpy.12118  1
2013 Lunch CK, Lafountain AM, Thomas S, Frank HA, Lewis LA, Cardon ZG. The xanthophyll cycle and NPQ in diverse desert and aquatic green algae. Photosynthesis Research. 115: 139-51. PMID 23728511 DOI: 10.1007/S11120-013-9846-X  1
2013 Kaplan F, Lewis LA, Herburger K, Holzinger A. Osmotic stress in Arctic and Antarctic strains of the green alga Zygnema (Zygnematales, Streptophyta): effects on photosynthesis and ultrastructure. Micron (Oxford, England : 1993). 44: 317-30. PMID 22959821 DOI: 10.1016/J.Micron.2012.08.004  1
2013 Pichrtová M, Remias D, Lewis LA, Holzinger A. Changes in phenolic compounds and cellular ultrastructure of arctic and antarctic strains of Zygnema (Zygnematophyceae, Streptophyta) after exposure to experimentally enhanced UV to PAR ratio. Microbial Ecology. 65: 68-83. PMID 22903087 DOI: 10.1007/S00248-012-0096-9  1
2013 Flechtner VR, Pietrasiak N, Lewis LA. Newly Revealed Diversity of Green Microalgae from Wilderness Areas of Joshua Tree National Park (JTNP) Monographs of the Western North American Naturalist. 6: 43-63. DOI: 10.3398/042.006.0103  0.64
2013 Fučíková K, Flechtner VR, Lewis LA. Revision of the genus Bracteacoccus Tereg (Chlorophyceae, Chlorophyta) based on a phylogenetic approach Nova Hedwigia. 96: 15-59. DOI: 10.1127/0029-5035/2012/0067  1
2013 Graham LE, Cook ME, Wilcox LW, Graham J, Taylor W, Wellman CH, Lewis L. Resistance of filamentous chlorophycean, ulvophycean, and xanthophycean algae to acetolysis: Testing Proterozoic and Paleozoic microfossil attributions International Journal of Plant Sciences. 174: 947-957. DOI: 10.1086/670591  1
2013 Lewis LA. The phycological society of America Limnology and Oceanography Bulletin. 22: 104-107. DOI: 10.1002/Lob.2013224104  1
2012 Tippery NP, Fučíková K, Lewis PO, Lewis LA. Probing the Monophyly of the Sphaeropleales (Chlorophyceae) Using Data From Five Genes. Journal of Phycology. 48: 1482-1493. PMID 27009998 DOI: 10.1111/Jpy.12003  0.4
2012 Rodríguez-Salinas E, Riveros-Rosas H, Li Z, Fucíková K, Brand JJ, Lewis LA, González-Halphen D. Lineage-specific fragmentation and nuclear relocation of the mitochondrial cox2 gene in chlorophycean green algae (Chlorophyta). Molecular Phylogenetics and Evolution. 64: 166-76. PMID 22724135 DOI: 10.1016/J.Ympev.2012.03.014  1
2012 Letsch MR, Lewis LA. Chloroplast gene arrangement variation within a closely related group of green algae (Trebouxiophyceae, Chlorophyta). Molecular Phylogenetics and Evolution. 64: 524-32. PMID 22659018 DOI: 10.1016/J.Ympev.2012.05.027  1
2012 McManus HA, Lewis LA, Fučíková K, Haugen P. Invasion of protein coding genes by green algal ribosomal group I introns. Molecular Phylogenetics and Evolution. 62: 109-16. PMID 22056605 DOI: 10.1016/J.Ympev.2011.09.027  1
2012 Kaplan F, Lewis LA, Wastian J, Holzinger A. Plasmolysis effects and osmotic potential of two phylogenetically distinct alpine strains of Klebsormidium (Streptophyta). Protoplasma. 249: 789-804. PMID 21979310 DOI: 10.1007/S00709-011-0324-Z  1
2012 Fučíková K, Lewis LA. Intersection of Chlorella, Muriella and Bracteacoccus: Resurrecting the genus Chromochloris Kol et Chodat (Chlorophyceae, Chlorophyta) Fottea. 12: 83-93. DOI: 10.5507/Fot.2012.007  1
2012 Lewis LA, Trainor FR. Survival of Protosiphon botryoides (Chlorophyceae, Chlorophyta) from a Connecticut soil dried for 43 years Phycologia. 51: 662-665. DOI: 10.2216/11-108.1  1
2012 Tippery NP, Fu?íková K, Lewis PO, Lewis LA. Probing the Monophyly of the Sphaeropleales (Chlorophyceae) Using Data From Five Genes Journal of Phycology. 48: 1482-1493. DOI: 10.1111/jpy.12003  1
2011 McManus HA, Lewis LA. MOLECULAR PHYLOGENETIC RELATIONSHIPS IN THE FRESHWATER FAMILY HYDRODICTYACEAE (SPHAEROPLEALES, CHLOROPHYCEAE), WITH AN EMPHASIS ON PEDIASTRUM DUPLEX(1). Journal of Phycology. 47: 152-63. PMID 27021721 DOI: 10.1111/J.1529-8817.2010.00940.X  1
2011 McManus HA, Lewis LA, Schultz ET. DISTINGUISHING MULTIPLE LINEAGES OF PEDIASTRUM DUPLEX WITH MORPHOMETRICS AND A PROPOSAL FOR LACUNASTRUM GEN. NOV(1). Journal of Phycology. 47: 123-30. PMID 27021718 DOI: 10.1111/J.1529-8817.2010.00941.X  1
2011 Fučíková K, Rada JC, Lewis LA. The tangled taxonomic history of Dictyococcus, Bracteacoccus and Pseudomuriella (Chlorophyceae, Chlorophyta) and their distinction based on a phylogenetic perspective Phycologia. 50: 422-429. DOI: 10.2216/10-69.1  1
2011 Fučíková K, Rada JC, Lukešová A, Lewis LA. Cryptic diversity within the genus Pseudomuriella hanagata (Chlorophyta, Chlorophyceae, Sphaeropleales) assessed using four barcode markers Nova Hedwigia. 93: 29-46. DOI: 10.1127/0029-5035/2011/0093-0029  1
2011 McManus HA, Lewis LA, Schultz ET. Distinguishing multiple lineages of pediastrum duplex with morphometrics and a proposal for lacunastrum gen. nov Journal of Phycology. 47: 123-130. DOI: 10.1111/j.1529-8817.2010.00941.x  1
2010 Hall JD, Fučíková K, Lo C, Lewis LA, Karol KG. An assessment of proposed DNA barcodes in freshwater green algae Cryptogamie, Algologie. 31: 529-555.  1
2009 Letsch MR, Muller-Parker G, Friedl T, Lewis LA. ELLIPTOCHLORIS MARINA SP. NOV. (TREBOUXIOPHYCEAE, CHLOROPHYTA), SYMBIOTIC GREEN ALGA OF THE TEMPERATE PACIFIC SEA ANEMONES ANTHOPLEURA XANTHOGRAMMICA AND A. ELEGANTISSIMA (ANTHOZOA, CNIDARIA)(1). Journal of Phycology. 45: 1127-35. PMID 27032358 DOI: 10.1111/J.1529-8817.2009.00727.X  1
2008 Cardon ZG, Gray DW, Lewis LA. The green algal underground: Evolutionary secrets of desert cells Bioscience. 58: 114-122. DOI: 10.1641/B580206  1
2007 Haugen P, Bhattacharya D, Palmer JD, Turner S, Lewis LA, Pryer KM. Cyanobacterial ribosomal RNA genes with multiple, endonuclease-encoding group I introns. Bmc Evolutionary Biology. 7: 159. PMID 17825109 DOI: 10.1186/1471-2148-7-159  1
2007 Gray DW, Lewis LA, Cardon ZG. Photosynthetic recovery following desiccation of desert green algae (Chlorophyta) and their aquatic relatives. Plant, Cell & Environment. 30: 1240-55. PMID 17727415 DOI: 10.1111/J.1365-3040.2007.01704.X  1
2006 Gray DW, Cardon ZG, Lewis LA. Simultaneous collection of rapid chlorophyll fluorescence induction kinetics, fluorescence quenching parameters, and environmental data using an automated PAM-2000/CR10X data logging system. Photosynthesis Research. 87: 295-301. PMID 16699920 DOI: 10.1007/S11120-005-9010-3  1
2005 Lewis LA, Lewis PO. Unearthing the molecular phylodiversity of desert soil green algae (Chlorophyta). Systematic Biology. 54: 936-47. PMID 16338765 DOI: 10.1080/10635150500354852  1
2005 Adl SM, Simpson AG, Farmer MA, Andersen RA, Anderson OR, Barta JR, Bowser SS, Brugerolle G, Fensome RA, Fredericq S, James TY, Karpov S, Kugrens P, Krug J, Lane CE, ... Lewis LA, et al. The new higher level classification of eukaryotes with emphasis on the taxonomy of protists. The Journal of Eukaryotic Microbiology. 52: 399-451. PMID 16248873 DOI: 10.1111/J.1550-7408.2005.00053.X  1
2005 McManus HA, Lewis LA. Molecular phylogenetics, morphological variation and colony-form evolution in the family Hydrodictyaceae (Sphaeropleales, Chlorophyta) Phycologia. 44: 582-595. DOI: 10.2216/0031-8884(2005)44[582:Mpmvac]2.0.Co;2  1
2004 Lewis LA, McCourt RM. Green algae and the origin of land plants. American Journal of Botany. 91: 1535-56. PMID 21652308 DOI: 10.3732/Ajb.91.10.1535  1
2004 Lewis LA, Muller-Parker G. Phylogenetic placement of "zoochlorellae" (Chlorophyta), algal symbiont of the temperate sea anemone Anthopleura elegantissima. The Biological Bulletin. 207: 87-92. PMID 15501850 DOI: 10.2307/1543583  1
2004 Lewis LA, Flechtner VR. Cryptic species of Scenedesmus (Chlorophyta) from desert soil communities of Western North America Journal of Phycology. 40: 1127-1137. DOI: 10.1111/J.1529-8817.2004.03235.X  1
2003 Shoup S, Lewis LA. Polyphyletic origin of parallel basal bodies in swimming cells of chlorophycean green algae (Chlorophyta) Journal of Phycology. 39: 789-796. DOI: 10.1046/J.1529-8817.2003.03009.X  1
2002 Lewis LA, Flechtner VR. Green algae (Chlorophyta) of desert microbiotic crusts: Diversity of North American taxa Taxon. 51: 443-451. DOI: 10.2307/1554857  1
2000 Watanabe S, Himizu A, Lewis LA, Floyd GL, Fuerst PA. Pseudoneochloris marina (Chlorophyta), a new coccoid Ulvophycean alga, and its phylogenetic position inferred from morphological and molecular data Journal of Phycology. 36: 596-604. DOI: 10.1046/j.1529-8817.2000.99123.x  1
1997 Lewis LA, Mishler BD, Vilgalys R. Phylogenetic relationships of the liverworts (Hepaticae), a basal embryophyte lineage, inferred from nucleotide sequence data of the chloroplast gene rbcL. Molecular Phylogenetics and Evolution. 7: 377-93. PMID 9187096 DOI: 10.1006/Mpev.1996.0395  1
1997 Lewis LA. Diversity and phylogenetic placement of Bracteacoccus Tereg (Chlorophyceae, Chlorophyta) based on 18S ribosomal RNA gene sequence data Journal of Phycology. 33: 279-285. DOI: 10.1111/J.0022-3646.1997.00279.X  1
1996 Hershkovitz MA, Lewis LA. Deep-level diagnostic value of the rDNA-ITS region Molecular Biology and Evolution. 13: 1276-1295. PMID 8896380 DOI: 10.1093/Oxfordjournals.Molbev.A025693  1
1996 Hanelt B, Van Schyndel D, Adema CM, Lewis LA, Loker ES. The phylogenetic position of Rhopalura ophiocomae (Orthonectida) based on 18S ribosomal DNA sequence analysis. Molecular Biology and Evolution. 13: 1187-91. PMID 8896370 DOI: 10.1093/Oxfordjournals.Molbev.A025683  1
1995 Lewis PO, Lewis LA. Reviews Systematic Biology. 44: 576-577. DOI: 10.1093/sysbio/44.4.576  1
1992 Wilcox LW, Lewis LA, Fuerst PA, Floyd GL. Group I introns within the nuclear-encoded small-subunit rRNA gene of three green algae. Molecular Biology and Evolution. 9: 1103-18. PMID 1435237 DOI: 10.1093/Oxfordjournals.Molbev.A040781  1
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