Ray Ming - Publications

Affiliations: 
Plant Biology University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 
Area:
Genetics, Evolution and Development Biology, Botany Biology

143 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Chen LY, VanBuren R, Paris M, Zhou H, Zhang X, Wai CM, Yan H, Chen S, Alonge M, Ramakrishnan S, Liao Z, Liu J, Lin J, Yue J, Fatima M, ... ... Ming R, et al. The bracteatus pineapple genome and domestication of clonally propagated crops. Nature Genetics. PMID 31570895 DOI: 10.1038/s41588-019-0506-8  0.6
2019 Zhang X, Zhang S, Zhao Q, Ming R, Tang H. Assembly of allele-aware, chromosomal-scale autopolyploid genomes based on Hi-C data. Nature Plants. PMID 31383970 DOI: 10.1038/s41477-019-0487-8  0.44
2019 Zhuang W, Chen H, Yang M, Wang J, Pandey MK, Zhang C, Chang WC, Zhang L, Zhang X, Tang R, Garg V, Wang X, Tang H, Chow CN, Wang J, ... ... Ming R, et al. The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics. PMID 31043757 DOI: 10.1038/s41588-019-0402-2  0.6
2019 Wang Y, Hua X, Xu J, Chen Z, Fan T, Zeng Z, Wang H, Hour AL, Yu Q, Ming R, Zhang J. Comparative genomics revealed the gene evolution and functional divergence of magnesium transporter families in Saccharum. Bmc Genomics. 20: 83. PMID 30678642 DOI: 10.1186/s12864-019-5437-3  0.6
2018 Zhang J, Zhang X, Tang H, Zhang Q, Hua X, Ma X, Zhu F, Jones T, Zhu X, Bowers J, Wai CM, Zheng C, Shi Y, Chen S, Xu X, ... ... Ming R, et al. Publisher Correction: Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L. Nature Genetics. PMID 30425353 DOI: 10.1038/s41588-018-0293-7  0.6
2018 Hu W, Hua X, Zhang Q, Wang J, Shen Q, Zhang X, Wang K, Yu Q, Lin YR, Ming R, Zhang J. New insights into the evolution and functional divergence of the SWEET family in Saccharum based on comparative genomics. Bmc Plant Biology. 18: 270. PMID 30404601 DOI: 10.1186/s12870-018-1495-y  0.6
2018 Sharma A, Song J, Lin Q, Singh R, Ramos N, Wang K, Zhang J, Ming R, Yu Q. Comparative Analysis of Homologous Sequences of and Reveals Independent Polyploidization Events. Frontiers in Plant Science. 9: 1414. PMID 30319674 DOI: 10.3389/fpls.2018.01414  0.6
2018 Zhang J, Zhang X, Tang H, Zhang Q, Hua X, Ma X, Zhu F, Jones T, Zhu X, Bowers J, Wai CM, Zheng C, Shi Y, Chen S, Xu X, ... ... Ming R, et al. Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L. Nature Genetics. PMID 30297971 DOI: 10.1038/s41588-018-0237-2  0.6
2018 Xu H, Yu Q, Shi Y, Hua X, Tang H, Yang L, Ming R, Zhang J. PGD: Pineapple Genomics Database. Horticulture Research. 5: 66. PMID 30245835 DOI: 10.1038/s41438-018-0078-2  0.6
2018 Yang X, Song J, Todd J, Peng Z, Paudel D, Luo Z, Ma X, You Q, Hanson E, Zhao Z, Zhao Y, Zhang J, Ming R, Wang J. Target enrichment sequencing of 307 germplasm accessions identified ancestry of ancient and modern hybrids and signatures of adaptation and selection in sugarcane (Saccharum spp.), a "sweet" crop with "bitter" genomes. Plant Biotechnology Journal. PMID 30051590 DOI: 10.1111/pbi.12992  0.6
2018 Wu J, Wang Y, Xu J, Korban SS, Fei Z, Tao S, Ming R, Tai S, Khan AM, Postman JD, Gu C, Yin H, Zheng D, Qi K, Li Y, et al. Diversification and independent domestication of Asian and European pears. Genome Biology. 19: 77. PMID 29890997 DOI: 10.1186/s13059-018-1452-y  0.6
2018 Zhang J, Zhang Q, Li L, Tang H, Zhang Q, Chen Y, Arro J, Zhang X, Wang A, Miao C, Ming R. Recent Polyploidization Events in Three Saccharum Founding Species. Plant Biotechnology Journal. PMID 29878497 DOI: 10.1111/pbi.12962  0.6
2018 Liu J, Chatham L, Aryal R, Yu Q, Ming R. Differential methylation and expression of HUA1 ortholog in three sex types of papaya. Plant Science : An International Journal of Experimental Plant Biology. 272: 99-106. PMID 29807610 DOI: 10.1016/j.plantsci.2018.04.001  1
2018 Orozco-Arias S, Liu J, Tabares-Soto R, Ceballos D, Silva Domingues D, Garavito A, Ming R, Guyot R. Inpactor, Integrated and Parallel Analyzer and Classifier of LTR Retrotransposons and Its Application for Pineapple LTR Retrotransposons Diversity and Dynamics. Biology. 7. PMID 29799487 DOI: 10.3390/biology7020032  0.48
2018 Dong G, Shen J, Zhang Q, Wang J, Yu Q, Ming R, Wang K, Zhang J. Development and Applications of Chromosome-Specific Cytogenetic BAC-FISH Probes in. Frontiers in Plant Science. 9: 218. PMID 29535742 DOI: 10.3389/fpls.2018.00218  0.6
2018 Singh R, Jones T, Wai CM, Jifon J, Nagai C, Ming R, Yu Q. Transcriptomic analysis of transgressive segregants revealed the central role of photosynthetic capacity and efficiency in biomass accumulation in sugarcane. Scientific Reports. 8: 4415. PMID 29535363 DOI: 10.1038/s41598-018-22798-5  0.48
2018 Meng Z, Hu X, Zhang Z, Li Z, Lin Q, Yang M, Yang P, Ming R, Yu Q, Wang K. Chromosome Nomenclature and Cytological Characterization of Sacred Lotus. Cytogenetic and Genome Research. PMID 29439256 DOI: 10.1159/000486777  0.48
2018 Liu J, Sharma A, Niewiara MJ, Singh R, Ming R, Yu Q. Papain-like cysteine proteases in Carica papaya: lineage-specific gene duplication and expansion. Bmc Genomics. 19: 26. PMID 29306330 DOI: 10.1186/s12864-017-4394-y  0.48
2017 Yang X, Hu R, Yin H, Jenkins J, Shu S, Tang H, Liu D, Weighill DA, Cheol Yim W, Ha J, Heyduk K, Goodstein DM, Guo HB, Moseley RC, Fitzek E, ... ... Ming R, et al. The Kalanchoë genome provides insights into convergent evolution and building blocks of crassulacean acid metabolism. Nature Communications. 8: 1899. PMID 29196618 DOI: 10.1038/s41467-017-01491-7  0.36
2017 Wai CM, Zhang J, Jones TC, Nagai C, Ming R. Cell wall metabolism and hexose allocation contribute to biomass accumulation in high yielding extreme segregants of a Saccharum interspecific F2 population. Bmc Genomics. 18: 773. PMID 29020919 DOI: 10.1186/s12864-017-4158-8  0.6
2017 Sharma A, Wai CM, Ming R, Yu Q. Diurnal Cycling Transcription Factors of Pineapple Revealed by Genome-Wide Annotation and Global Transcriptomic Analysis. Genome Biology and Evolution. 9: 2170-2190. PMID 28922793 DOI: 10.1093/gbe/evx161  0.48
2017 Bao J, Chen M, Zhong Z, Tang W, Lin L, Zhang X, Jiang H, Zhang D, Miao C, Tang H, Zhang J, Lu G, Ming R, Norvienyeku J, Wang B, et al. PacBio Sequencing Reveals Transposable Element as a Key Contributor to Genomic Plasticity and Virulence Variation in Magnaporthe oryzae. Molecular Plant. PMID 28838703 DOI: 10.1016/j.molp.2017.08.008  0.6
2017 Wai CM, VanBuren R, Zhang J, Huang L, Miao W, Edger PP, Yim WC, Priest HD, Meyers BC, Mockler T, Smith JAC, Cushman JC, Ming R. Temporal and spatial transcriptomic and microRNA dynamics of CAM photosynthesis in pineapple. The Plant Journal : For Cell and Molecular Biology. PMID 28670834 DOI: 10.1111/tpj.13630  0.6
2017 Chen Y, Zhang Q, Hu W, Zhang X, Wang L, Hua X, Yu Q, Ming R, Zhang J. Evolution and expression of the fructokinase gene family in Saccharum. Bmc Genomics. 18: 197. PMID 28222695 DOI: 10.1186/s12864-017-3535-7  0.6
2016 VanBuren R, Wai CM, Zhang J, Han J, Arro J, Lin Z, Liao Z, Yu Q, Wang ML, Zee F, Moore RC, Charlesworth D, Ming R. Extremely low nucleotide diversity in the X-linked region of papaya caused by a strong selective sweep. Genome Biology. 17: 230. PMID 27890017 DOI: 10.1186/s13059-016-1095-9  0.6
2016 Ming R, Wai CM, Guyot R. Pineapple Genome: A Reference for Monocots and CAM Photosynthesis. Trends in Genetics : Tig. PMID 27613080 DOI: 10.1016/j.tig.2016.08.008  0.4
2016 Fang J, Lin A, Qiu W, Cai H, Umar M, Chen R, Ming R. Transcriptome Profiling Revealed Stress-Induced and Disease Resistance Genes Up-Regulated in PRSV Resistant Transgenic Papaya. Frontiers in Plant Science. 7: 855. PMID 27379138 DOI: 10.3389/fpls.2016.00855  1
2016 Deng Y, Zhang Q, Ming R, Lin L, Lin X, Lin Y, Li X, Xie B, Wen Z. Analysis of the Mitochondrial Genome in Hypomyces aurantius Reveals a Novel Twintron Complex in Fungi. International Journal of Molecular Sciences. 17. PMID 27376282 DOI: 10.3390/ijms17071049  1
2016 Zhang J, Sharma A, Yu Q, Wang J, Li L, Zhu L, Zhang X, Chen Y, Ming R. Comparative structural analysis of Bru1 region homeologs in Saccharum spontaneum and S. officinarum. Bmc Genomics. 17: 446. PMID 27287040 DOI: 10.1186/s12864-016-2817-9  0.6
2016 Zhang Q, Hu W, Zhu F, Wang L, Yu Q, Ming R, Zhang J. Structure, phylogeny, allelic haplotypes and expression of sucrose transporter gene families in Saccharum. Bmc Genomics. 17: 88. PMID 26830680 DOI: 10.1186/s12864-016-2419-6  1
2016 Wai CM, Powell B, Ming R, Min XJ. Genome-Wide Identification and Analysis of Genes Encoding Proteolytic Enzymes in Pineapple Tropical Plant Biology. 1-15. DOI: 10.1007/s12042-016-9172-5  1
2016 Wai CM, Powell B, Ming R, Min XJ. Analysis of Alternative Splicing Landscape in Pineapple (Ananas comosus) Tropical Plant Biology. 1-11. DOI: 10.1007/s12042-016-9168-1  0.4
2016 Singh R, Ming R, Yu Q. Comparative Analysis of GC Content Variations in Plant Genomes Tropical Plant Biology. 1-14. DOI: 10.1007/s12042-016-9165-4  1
2016 Fang J, Miao C, Chen R, Ming R. Genome-Wide Comparative Analysis of Microsatellites in Pineapple Tropical Plant Biology. 9: 117-135. DOI: 10.1007/s12042-016-9163-6  1
2016 Fang J, Wood A, Chen R, Ming R. Molecular basis of off-type microsatellite markers in papaya Euphytica. 1-17. DOI: 10.1007/s10681-015-1630-x  1
2016 Zhou Q, Chen Z, Ming R. Copula-based grouped risk aggregation under mixed operation Applications of Mathematics. 61: 103-120. DOI: 10.1007/s10492-016-0124-z  0.56
2015 Zhang L, Ming R, Zhang J, Tao A, Fang P, Qi J. De novo transcriptome sequence and identification of major bast-related genes involved in cellulose biosynthesis in jute (Corchorus capsularis L.). Bmc Genomics. 16: 1062. PMID 26666317 DOI: 10.1186/s12864-015-2256-z  1
2015 Ming R, VanBuren R, Wai CM, Tang H, Schatz MC, Bowers JE, Lyons E, Wang ML, Chen J, Biggers E, Zhang J, Huang L, Zhang L, Miao W, Zhang J, et al. The pineapple genome and the evolution of CAM photosynthesis. Nature Genetics. 47: 1435-42. PMID 26523774 DOI: 10.1038/ng.3435  0.6
2015 Yang X, Cushman JC, Borland AM, Edwards EJ, Wullschleger SD, Tuskan GA, Owen NA, Griffiths H, Smith JA, De Paoli HC, Weston DJ, Cottingham R, Hartwell J, Davis SC, Silvera K, ... Ming R, et al. A roadmap for research on crassulacean acid metabolism (CAM) to enhance sustainable food and bioenergy production in a hotter, drier world. The New Phytologist. 207: 491-504. PMID 26153373 DOI: 10.1111/nph.13393  1
2015 Davis SC, Ming R, LeBauer DS, Long SP. Toward systems-level analysis of agricultural production from crassulacean acid metabolism (CAM): scaling from cell to commercial production. The New Phytologist. PMID 26094655 DOI: 10.1111/nph.13522  1
2015 VanBuren R, Zeng F, Chen C, Zhang J, Wai CM, Han J, Aryal R, Gschwend AR, Wang J, Na JK, Huang L, Zhang L, Miao W, Gou J, Arro J, ... ... Ming R, et al. Origin and domestication of papaya Yh chromosome. Genome Research. 25: 524-33. PMID 25762551 DOI: 10.1101/gr.183905.114  1
2015 Ming R, Man Wai C. Assembling allopolyploid genomes: no longer formidable. Genome Biology. 16: 27. PMID 25723730 DOI: 10.1186/s13059-015-0585-5  1
2015 Tang H, Zhang X, Miao C, Zhang J, Ming R, Schnable JC, Schnable PS, Lyons E, Lu J. ALLMAPS: robust scaffold ordering based on multiple maps. Genome Biology. 16: 3. PMID 25583564 DOI: 10.1186/s13059-014-0573-1  0.6
2015 Iovene M, Yu Q, Ming R, Jiang J. Evidence for emergence of sex-determining gene(s) in a centromeric region in Vasconcellea parviflora. Genetics. 199: 413-21. PMID 25480779 DOI: 10.1534/genetics.114.173021  1
2015 Jiang T, Cui S, Ming R. Large deviations for the stochastic present value of aggregate claims in the renewal risk model Statistics and Probability Letters. 101: 83-91. DOI: 10.1016/j.spl.2015.02.020  0.56
2015 Liu X, Chen Z, Ming R. The optimal dividend barrier in the perturbed compound Poisson risk model with randomized observation time Journal of Systems Science and Complexity. 28: 451-470. DOI: 10.1007/s11424-015-3156-7  0.56
2014 Leisner CP, Ming R, Ainsworth EA. Distinct transcriptional profiles of ozone stress in soybean (Glycine max) flowers and pods. Bmc Plant Biology. 14: 335. PMID 25430603 DOI: 10.1186/s12870-014-0335-y  1
2014 Denoeud F, Carretero-Paulet L, Dereeper A, Droc G, Guyot R, Pietrella M, Zheng C, Alberti A, Anthony F, Aprea G, Aury JM, Bento P, Bernard M, Bocs S, Campa C, ... ... Ming R, et al. The coffee genome provides insight into the convergent evolution of caffeine biosynthesis. Science (New York, N.Y.). 345: 1181-4. PMID 25190796 DOI: 10.1126/science.1255274  1
2014 Bachtrog D, Mank JE, Peichel CL, Kirkpatrick M, Otto SP, Ashman TL, Hahn MW, Kitano J, Mayrose I, Ming R, Perrin N, Ross L, Valenzuela N, Vamosi JC. Sex determination: why so many ways of doing it? Plos Biology. 12: e1001899. PMID 24983465 DOI: 10.1371/journal.pbio.1001899  1
2014 Berdan EL, Kozak GM, Ming R, Rayburn AL, Kiehart R, Fuller RC. Insight into genomic changes accompanying divergence: genetic linkage maps and synteny of Lucania goodei and L. parva reveal a Robertsonian fusion. G3 (Bethesda, Md.). 4: 1363-72. PMID 24898707 DOI: 10.1534/g3.114.012096  1
2014 Na JK, Wang J, Ming R. Accumulation of interspersed and sex-specific repeats in the non-recombining region of papaya sex chromosomes. Bmc Genomics. 15: 335. PMID 24885930 DOI: 10.1186/1471-2164-15-335  1
2014 Zhang Q, Li L, VanBuren R, Liu Y, Yang M, Xu L, Bowers JE, Zhong C, Han Y, Li S, Ming R. Optimization of linkage mapping strategy and construction of a high-density American lotus linkage map. Bmc Genomics. 15: 372. PMID 24885335 DOI: 10.1186/1471-2164-15-372  0.44
2014 Zhang J, Liu J, Ming R. Genomic analyses of the CAM plant pineapple. Journal of Experimental Botany. 65: 3395-404. PMID 24692645 DOI: 10.1093/jxb/eru101  1
2014 Zhang J, Boualem A, Bendahmane A, Ming R. Genomics of sex determination. Current Opinion in Plant Biology. 18: 110-6. PMID 24682067 DOI: 10.1016/j.pbi.2014.02.012  1
2014 Aryal R, Ming R. Sex determination in flowering plants: papaya as a model system. Plant Science : An International Journal of Experimental Plant Biology. 217: 56-62. PMID 24467896 DOI: 10.1016/j.plantsci.2013.10.018  1
2014 Aryal R, Jagadeeswaran G, Zheng Y, Yu Q, Sunkar R, Ming R. Sex specific expression and distribution of small RNAs in papaya. Bmc Genomics. 15: 20. PMID 24410969 DOI: 10.1186/1471-2164-15-20  1
2014 Li J, Tang H, Bowers JE, Ming R, Paterson AH. Insights into the Common Ancestor of Eudicots Advances in Botanical Research. 69: 137-174. DOI: 10.1016/B978-0-12-417163-3.00006-8  1
2014 Han J, Murray JE, Yu Q, Moore PH, Ming R. The effects of gibberellic acid on sex expression and secondary sexual characteristics in papaya Hortscience. 49: 378-383.  1
2014 Wang WG, Ming RX, Gan JJ. The limit theory of Galton-Watson branching process in random environment Acta Mathematica Sinica, Chinese Series. 57: 923-930.  0.56
2014 Zeng F, Yu Q, Hou S, Moore PH, Alam M, Ming R. Features of transcriptome in trioecious papaya revealed by a large-scale sequencing of ESTs and comparative analysis in higher plants Plant Omics. 7: 450-460.  1
2013 Wang J, Nayak S, Koch K, Ming R. Carbon partitioning in sugarcane (Saccharum species). Frontiers in Plant Science. 4: 201. PMID 23785381 DOI: 10.3389/fpls.2013.00201  1
2013 Vanburen R, Ming R. Dynamic transposable element accumulation in the nascent sex chromosomes of papaya. Mobile Genetic Elements. 3: e23462. PMID 23734293 DOI: 10.4161/mge.23462  0.4
2013 Zhang J, Arro J, Chen Y, Ming R. Haplotype analysis of sucrose synthase gene family in three Saccharum species. Bmc Genomics. 14: 314. PMID 23663250 DOI: 10.1186/1471-2164-14-314  1
2013 Ming R, VanBuren R, Liu Y, Yang M, Han Y, Li LT, Zhang Q, Kim MJ, Schatz MC, Campbell M, Li J, Bowers JE, Tang H, Lyons E, Ferguson AA, et al. Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.). Genome Biology. 14: R41. PMID 23663246 DOI: 10.1186/gb-2013-14-5-r41  1
2013 VanBuren R, Ming R. Organelle DNA accumulation in the recently evolved papaya sex chromosomes. Molecular Genetics and Genomics : Mgg. 288: 277-84. PMID 23636354 DOI: 10.1007/s00438-013-0747-7  1
2013 Wu J, Wang Z, Shi Z, Zhang S, Ming R, Zhu S, Khan MA, Tao S, Korban SS, Wang H, Chen NJ, Nishio T, Xu X, Cong L, Qi K, et al. The genome of the pear (Pyrus bretschneideri Rehd.). Genome Research. 23: 396-408. PMID 23149293 DOI: 10.1101/gr.144311.112  1
2013 Ming R, Chen Y, Wu Y. On local asymptotics for a heavy-tailed random walk maximum with applications in insurance and queueing theory Journal of University of Science and Technology of China. 43: 173-181. DOI: 10.3969/j.issn.0253-2778.2013.03.001  0.56
2013 Zhu L, Zhang J, Chen Y, Pan H, Ming R. Identification and genes expression analysis of ATP-dependent phosphofructokinase family members among three Saccharum species Functional Plant Biology. 40: 369-378. DOI: 10.1071/FP12182  1
2013 Jin Y, Ming R, Wu Y. Nonadditivity in loglinear models using φ-divergences and MφEs under product-multinomial sampling Journal of Statistical Planning and Inference. 143: 356-367. DOI: 10.1016/j.jspi.2012.08.005  0.56
2013 Zheng Y, Jagadeeswaran G, Gowdu K, Wang N, Li S, Ming R, Sunkar R. Genome-Wide Analysis of MicroRNAs in Sacred Lotus, Nelumbo nucifera (Gaertn) Tropical Plant Biology. 6: 117-130. DOI: 10.1007/s12042-013-9127-z  1
2013 Singh R, Ming R, Yu Q. Nucleotide Composition of the Nelumbo nucifera Genome Tropical Plant Biology. 6: 85-97. DOI: 10.1007/s12042-013-9123-3  1
2013 Jia RZ, Ming R, Zhu YJ. Genome-Wide Analysis of Nucleotide-Binding Site (NBS) Disease Resistance (R) Genes in Sacred Lotus (Nelumbo nucifera Gaertn.) Reveals Their Transition Role During Early Evolution of Land Plants Tropical Plant Biology. 6: 98-116. DOI: 10.1007/s12042-013-9122-4  1
2013 Lum G, VanBuren R, Ming R, Min XJ. Secretome Prediction and Analysis in Sacred Lotus (Nelumbo nucifera Gaertn.) Tropical Plant Biology. 6: 131-137. DOI: 10.1007/s12042-013-9121-5  1
2013 Wang Wy, Xiao Lq, Ming Rx, Hu Yj. On two actuarial quantities for the compound Poisson risk model with tax and a threshold dividend strategy Applied Mathematics. 28: 27-39. DOI: 10.1007/s11766-013-2811-9  0.56
2013 Gschwend AR, Wai CM, Zee F, Arumuganathan AK, Ming R. Genome size variation among sex types in dioecious and trioecious Caricaceae species Euphytica. 189: 461-469. DOI: 10.1007/s10681-012-0815-9  1
2013 Zhao Yy, Ming Rx, Wu Yh. Approximation to the distribution of the least squares estimators in two dimensional cosine models by randomly weighted bootstrap Acta Mathematicae Applicatae Sinica. 29: 765-776. DOI: 10.1007/s10255-013-0254-y  0.56
2013 VanBuren R, Walters B, Ming R, Min XJ. Analysis of expressed sequence tags and alternative splicing genes in sacred lotus (Nelumbo nucifera Gaertn.) Plant Omics. 6: 311-317.  1
2012 Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R. Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya. Bmc Genomics. 13: 682. PMID 23216749 DOI: 10.1186/1471-2164-13-682  1
2012 Yang M, Han Y, VanBuren R, Ming R, Xu L, Han Y, Liu Y. Genetic linkage maps for Asian and American lotus constructed using novel SSR markers derived from the genome of sequenced cultivar. Bmc Genomics. 13: 653. PMID 23170872 DOI: 10.1186/1471-2164-13-653  0.4
2012 Wai CM, Moore PH, Paull RE, Ming R, Yu Q. An integrated cytogenetic and physical map reveals unevenly distributed recombination spots along the papaya sex chromosomes. Chromosome Research : An International Journal On the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology. 20: 753-67. PMID 23007683 DOI: 10.1007/s10577-012-9312-1  1
2012 Wang J, Na JK, Yu Q, Gschwend AR, Han J, Zeng F, Aryal R, VanBuren R, Murray JE, Zhang W, Navajas-Pérez R, Feltus FA, Lemke C, Tong EJ, Chen C, ... ... Ming R, et al. Sequencing papaya X and Yh chromosomes reveals molecular basis of incipient sex chromosome evolution. Proceedings of the National Academy of Sciences of the United States of America. 109: 13710-5. PMID 22869747 DOI: 10.1073/pnas.1207833109  1
2012 Gschwend AR, Yu Q, Tong EJ, Zeng F, Han J, VanBuren R, Aryal R, Charlesworth D, Moore PH, Paterson AH, Ming R. Rapid divergence and expansion of the X chromosome in papaya. Proceedings of the National Academy of Sciences of the United States of America. 109: 13716-21. PMID 22869742 DOI: 10.1073/pnas.1121096109  1
2012 Na JK, Wang J, Murray JE, Gschwend AR, Zhang W, Yu Q, Navajas-Pérez R, Feltus FA, Chen C, Kubat Z, Moore PH, Jiang J, Paterson AH, Ming R. Construction of physical maps for the sex-specific regions of papaya sex chromosomes. Bmc Genomics. 13: 176. PMID 22568889 DOI: 10.1186/1471-2164-13-176  1
2012 Swaminathan K, Chae WB, Mitros T, Varala K, Xie L, Barling A, Glowacka K, Hall M, Jezowski S, Ming R, Hudson M, Juvik JA, Rokhsar DS, Moose SP. A framework genetic map for Miscanthus sinensis from RNAseq-based markers shows recent tetraploidy. Bmc Genomics. 13: 142. PMID 22524439 DOI: 10.1186/1471-2164-13-142  1
2012 Gschwend AR, Weingartner LA, Moore RC, Ming R. The sex-specific region of sex chromosomes in animals and plants. Chromosome Research : An International Journal On the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology. 20: 57-69. PMID 22105696 DOI: 10.1007/s10577-011-9255-y  1
2012 Bradley CA, Wood A, Zhang GR, Murray JE, Phillips DV, Ming R. Genetic diversity of Cercospora sojina revealed by amplified fragment length polymorphism markers Canadian Journal of Plant Pathology. 34: 410-416. DOI: 10.1080/07060661.2012.711775  1
2012 Blas AL, Yu Q, Veatch OJ, Paull RE, Moore PH, Ming R. Genetic mapping of quantitative trait loci controlling fruit size and shape in papaya Molecular Breeding. 29: 457-466. DOI: 10.1007/s11032-011-9562-1  1
2012 Ming R, Yu Q, Moore PH. Papaya genome and genomics Genomics of Tree Crops. 2147483647: 241-259. DOI: 10.1007/978-1-4614-0920-5_8  1
2012 Gschwend AR, Ming R. Papaya sex chromosomes New Insights On Plant Sex Chromosomes. 51-66.  1
2011 Gschwend AR, Yu Q, Moore P, Saski C, Chen C, Wang J, Na JK, Ming R. Construction of papaya male and female BAC libraries and application in physical mapping of the sex chromosomes. Journal of Biomedicine & Biotechnology. 2011: 929472. PMID 21765640 DOI: 10.1155/2011/929472  1
2011 Ming R, Bendahmane A, Renner SS. Sex chromosomes in land plants. Annual Review of Plant Biology. 62: 485-514. PMID 21526970 DOI: 10.1146/annurev-arplant-042110-103914  1
2011 Yu Q, Guyot R, de Kochko A, Byers A, Navajas-Pérez R, Langston BJ, Dubreuil-Tranchant C, Paterson AH, Poncet V, Nagai C, Ming R. Micro-collinearity and genome evolution in the vicinity of an ethylene receptor gene of cultivated diploid and allotetraploid coffee species (Coffea). The Plant Journal : For Cell and Molecular Biology. 67: 305-17. PMID 21457367 DOI: 10.1111/j.1365-313X.2011.04590.x  1
2011 Yang M, Nie Y, Zhu X, Ming R. Study on low profile SMC for the production of cylinder head cover Advanced Materials Research. 221: 418-421. DOI: 10.4028/www.scientific.net/AMR.221.418  0.32
2011 Zhang X, Niu S, Chen Y, Ming R. Design of IP core for real-time simulation on switching characteristic of IGBT 2011 International Conference On Electric Information and Control Engineering, Iceice 2011 - Proceedings. 4109-4112. DOI: 10.1109/ICEICE.2011.5777384  0.6
2011 Wang W, Ming R, Hu Y. On the expected discounted penalty function for risk process with tax Statistics and Probability Letters. 81: 489-501. DOI: 10.1016/j.spl.2010.12.012  0.56
2011 VanBuren R, Li J, Zee F, Zhu J, Liu C, Arumuganathan AK, Ming R. Longli is not a Hybrid of Longan and Lychee as Revealed by Genome Size Analysis and Trichome Morphology Tropical Plant Biology. 4: 228-236. DOI: 10.1007/s12042-011-9084-3  1
2011 Moore PH, Ming R. Sugarcane Breeding and Biotechnology to Feed the Emergent Sugarcane Biorefinery Industry Tropical Plant Biology. 4: 1-2. DOI: 10.1007/s12042-011-9075-4  1
2011 Li S, Ming R, Huang L. Optimal dividend strategies in a double compound poisson risk process Wuhan University Journal of Natural Sciences. 16: 133-138. DOI: 10.1007/s11859-011-0725-z  0.56
2010 Wu X, Wang J, Na JK, Yu Q, Moore RC, Zee F, Huber SC, Ming R. The origin of the non-recombining region of sex chromosomes in Carica and Vasconcellea. The Plant Journal : For Cell and Molecular Biology. 63: 801-10. PMID 20579309 DOI: 10.1111/j.1365-313X.2010.04284.x  1
2010 Wang J, Roe B, Macmil S, Yu Q, Murray JE, Tang H, Chen C, Najar F, Wiley G, Bowers J, Van Sluys MA, Rokhsar DS, Hudson ME, Moose SP, Paterson AH, ... Ming R, et al. Microcollinearity between autopolyploid sugarcane and diploid sorghum genomes. Bmc Genomics. 11: 261. PMID 20416060 DOI: 10.1186/1471-2164-11-261  1
2010 Blas AL, Ming R, Liu Z, Veatch OJ, Paull RE, Moore PH, Yu Q. Cloning of the papaya chromoplast-specific lycopene beta-cyclase, CpCYC-b, controlling fruit flesh color reveals conserved microsynteny and a recombination hot spot. Plant Physiology. 152: 2013-22. PMID 20181753 DOI: 10.1104/pp.109.152298  1
2010 Swaminathan K, Alabady MS, Varala K, De Paoli E, Ho I, Rokhsar DS, Arumuganathan AK, Ming R, Green PJ, Meyers BC, Moose SP, Hudson ME. Genomic and small RNA sequencing of Miscanthus x giganteus shows the utility of sorghum as a reference genome sequence for Andropogoneae grasses. Genome Biology. 11: R12. PMID 20128909 DOI: 10.1186/gb-2010-11-2-r12  1
2010 Ming RX, Wang WY, Xiao LQ. On the time value of absolute ruin with tax Insurance: Mathematics and Economics. 46: 67-84. DOI: 10.1016/j.insmatheco.2009.09.004  0.56
2010 Wai CM, Ming R, Moore PH, Paull RE, Yu Q. Development of Chromosome-specific Cytogenetic Markers and Merging of Linkage Fragments in Papaya Tropical Plant Biology. 3: 171-181. DOI: 10.1007/s12042-010-9054-1  1
2010 Zhang W, Wai CM, Ming R, Yu Q, Jiang J. Integration of Genetic and Cytological Maps and Development of a Pachytene Chromosome-based Karyotype in Papaya Tropical Plant Biology. 3: 166-170. DOI: 10.1007/s12042-010-9053-2  1
2010 Li L, Ming R, Fei M. The design of neuron-PID controller for a class of networked control system under data rate constraints Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 6329: 475-483. DOI: 10.1007/978-3-642-15597-0_52  0.36
2010 Ming R, Xin M, Li M, Liu J. Mixed monolayers of O-quaternized -N, N-dilauryl chitosan with cholesterol Cailiao Yanjiu Xuebao/Chinese Journal of Materials Research. 24: 254-258.  0.48
2009 Blas AL, Yu Q, Chen C, Veatch O, Moore PH, Paull RE, Ming R. Enrichment of a papaya high-density genetic map with AFLP markers. Genome / National Research Council Canada = GéNome / Conseil National De Recherches Canada. 52: 716-25. PMID 19767901 DOI: 10.1139/g09-043  1
2009 Yu Q, Tong E, Skelton RL, Bowers JE, Jones MR, Murray JE, Hou S, Guan P, Acob RA, Luo MC, Moore PH, Alam M, Paterson AH, Ming R. A physical map of the papaya genome with integrated genetic map and genome sequence. Bmc Genomics. 10: 371. PMID 19664231 DOI: 10.1186/1471-2164-10-371  0.48
2009 Porter BW, Paidi M, Ming R, Alam M, Nishijima WT, Zhu YJ. Genome-wide analysis of Carica papaya reveals a small NBS resistance gene family. Molecular Genetics and Genomics : Mgg. 281: 609-26. PMID 19263082 DOI: 10.1007/s00438-009-0434-x  1
2009 Zhang Q, Li G, Tang H, Ming R, Li L. Screening for anti-myocardial ischemia fractions from extract of Sorbus Tianschanica L Chinese Pharmacological Bulletin. 25: 277-278.  0.44
2008 Zhang W, Wang X, Yu Q, Ming R, Jiang J. DNA methylation and heterochromatinization in the male-specific region of the primitive Y chromosome of papaya. Genome Research. 18: 1938-43. PMID 18593814 DOI: 10.1101/gr.078808.108  1
2008 Ming R, Hou S, Feng Y, Yu Q, Dionne-Laporte A, Saw JH, Senin P, Wang W, Ly BV, Lewis KL, Salzberg SL, Feng L, Jones MR, Skelton RL, Murray JE, et al. The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus). Nature. 452: 991-6. PMID 18432245 DOI: 10.1038/nature06856  1
2008 Ackerman CM, Yu Q, Kim S, Paull RE, Moore PH, Ming R. B-class MADS-box genes in trioecious papaya: two paleoAP3 paralogs, CpTM6-1 and CpTM6-2, and a PI ortholog CpPI. Planta. 227: 741-53. PMID 17985156 DOI: 10.1007/s00425-007-0653-5  1
2008 Yu Q, Hou S, Feltus FA, Jones MR, Murray JE, Veatch O, Lemke C, Saw JH, Moore RC, Thimmapuram J, Liu L, Moore PH, Alam M, Jiang J, Paterson AH, ... Ming R, et al. Low X/Y divergence in four pairs of papaya sex-linked genes. The Plant Journal : For Cell and Molecular Biology. 53: 124-32. PMID 17973896 DOI: 10.1111/j.1365-313X.2007.03329.x  1
2008 Wu KK, Ming R, Moore PH, Paterson AH. Sugarcane Genomics and Breeding Plant Breeding: the Arnel R. Hallauer International Symposium. 283-292. DOI: 10.1002/9780470752708.ch20  1
2007 Ming R, Wang J, Moore PH, Paterson AH. Sex chromosomes in flowering plants. American Journal of Botany. 94: 141-50. PMID 21642216 DOI: 10.3732/ajb.94.2.141  1
2007 Chen C, Yu Q, Hou S, Li Y, Eustice M, Skelton RL, Veatch O, Herdes RE, Diebold L, Saw J, Feng Y, Qian W, Bynum L, Wang L, Moore PH, ... ... Ming R, et al. Construction of a sequence-tagged high-density genetic map of papaya for comparative structural and evolutionary genomics in brassicales. Genetics. 177: 2481-91. PMID 17947401 DOI: 10.1534/genetics.107.081463  0.48
2007 Yu Q, Hou S, Hobza R, Feltus FA, Wang X, Jin W, Skelton RL, Blas A, Lemke C, Saw JH, Moore PH, Alam M, Jiang J, Paterson AH, Vyskot B, ... Ming R, et al. Chromosomal location and gene paucity of the male specific region on papaya Y chromosome. Molecular Genetics and Genomics : Mgg. 278: 177-85. PMID 17520292 DOI: 10.1007/s00438-007-0243-z  0.48
2007 Ming R, Yu Q, Moore PH. Sex determination in papaya. Seminars in Cell & Developmental Biology. 18: 401-8. PMID 17353137 DOI: 10.1016/j.semcdb.2006.11.013  1
2007 Ming R, Moore PH. Genomics of sex chromosomes. Current Opinion in Plant Biology. 10: 123-30. PMID 17300986 DOI: 10.1016/j.pbi.2007.01.013  1
2007 He X, Ming R, Hu Y. A large deviation principle for the risk process with varying premium Wuhan University Journal of Natural Sciences. 12: 412-416. DOI: 10.1007/s11859-006-0082-5  0.56
2007 Ming R, Modibo D, Hu Y. A local asymptotic behavior for ruin probability in the renewal risk model Wuhan University Journal of Natural Sciences. 12: 407-411. DOI: 10.1007/s11859-006-0076-3  0.56
2006 Skelton RL, Yu Q, Srinivasan R, Manshardt R, Moore PH, Ming R. Tissue differential expression of lycopene beta-cyclase gene in papaya. Cell Research. 16: 731-9. PMID 16801954 DOI: 10.1038/sj.cr.7310081  1
2006 Lai CW, Yu Q, Hou S, Skelton RL, Jones MR, Lewis KL, Murray J, Eustice M, Guan P, Agbayani R, Moore PH, Ming R, Presting GG. Analysis of papaya BAC end sequences reveals first insights into the organization of a fruit tree genome. Molecular Genetics and Genomics : Mgg. 276: 1-12. PMID 16703363 DOI: 10.1007/s00438-006-0122-z  0.48
2005 Yu Q, Moore PH, Albert HH, Roader AH, Ming R. Cloning and characterization of a FLORICAULA/LEAFY ortholog, PFL, in polygamous papaya. Cell Research. 15: 576-84. PMID 16117847 DOI: 10.1038/sj.cr.7290327  1
2005 Kato CY, Nagai C, Moore PH, Zee F, Kim MS, Steiger DL, Ming R. Intra-specific DNA polymorphism in pineapple (Ananas comosus (L.) Merr.) assessed by AFLP markers Genetic Resources and Crop Evolution. 51: 815-825. DOI: 10.1007/s10722-005-0005-x  1
2005 Huang ZX, Li J, Qin Y, Mei QL, Ming RF. New thickening system of low pressure sheet molding compound Wuhan Ligong Daxue Xuebao/Journal of Wuhan University of Technology. 27: 15-18.  0.32
2004 Schenck S, Crepeau MW, Wu KK, Moore PH, Yu Q, Ming R. Genetic diversity and relationships in native Hawaiian Saccharum officinarum sugarcane Journal of Heredity. 95: 327-331. PMID 15247312 DOI: 10.1093/jhered/esh052  1
2004 Ma H, Moore PH, Liu Z, Kim MS, Yu Q, Fitch MM, Sekioka T, Paterson AH, Ming R. High-density linkage mapping revealed suppression of recombination at the sex determination locus in papaya. Genetics. 166: 419-36. PMID 15020433  0.48
2004 Liu Z, Moore PH, Ma H, Ackerman CM, Ragiba M, Yu Q, Pearl HM, Kim MS, Charlton JW, Stiles JI, Zee FT, Paterson AH, Ming R. A primitive Y chromosome in papaya marks incipient sex chromosome evolution. Nature. 427: 348-52. PMID 14737167 DOI: 10.1038/nature02228  1
2004 Pearl HM, Nagai C, Moore PH, Steiger DL, Osgood RV, Ming R. Construction of a genetic map for arabica coffee. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 108: 829-35. PMID 14605810 DOI: 10.1007/s00122-003-1498-3  1
2003 Steiger DL, Moore PH, Zee F, Liu Z, Ming R. Genetic relationships of macadamia cultivars and species revealed by AFLP markers Euphytica. 132: 269-277. DOI: 10.1023/A:1025025522276  1
2003 Zhou L, Chen CC, Ming R, Christopher DA, Paull RE. Apoplastic invertase and its enhanced expression and post-translation control during fruit maturation and ripening Journal of the American Society For Horticultural Science. 128: 628-635.  1
2002 Ming R, Del Monte TA, Hernandez E, Moore PH, Irvine JE, Paterson AH. Comparative analysis of QTLs affecting plant height and flowering among closely-related diploid and polyploid genomes. Genome / National Research Council Canada = GéNome / Conseil National De Recherches Canada. 45: 794-803. PMID 12416611 DOI: 10.1139/g02-042  1
2002 Steiger DL, Nagai C, Moore PH, Morden CW, Osgood RV, Ming R. AFLP analysis of genetic diversity within and among Coffea arabica cultivars Theoretical and Applied Genetics. 105: 209-215. DOI: 10.1007/s00122-002-0939-8  1
2002 Ming R, Wang YW, Draye X, Moore PH, Irvine JE, Paterson AH. Molecular dissection of complex traits in autopolyploids: Mapping QTLs affecting sugar yield and related traits in sugarcane Theoretical and Applied Genetics. 105: 332-345. DOI: 10.1007/s00122-001-0861-5  1
2002 Ming R, Liu SC, Bowers JE, Moore PH, Irvine JE, Paterson AH. Construction of a Saccharum consensus genetic map from two interspecific crosses Crop Science. 42: 570-583.  1
2001 Ming R, Liu SC, Moore PH, Irvine JE, Paterson AH. QTL analysis in a complex autopolyploid: Genetic control of sugar content in sugarcane Genome Research. 11: 2075-2084. PMID 11731498 DOI: 10.1101/gr.198801  1
2001 Ming R, Moore PH, Zee F, Abbey CA, Ma H, Paterson AH. Construction and characterization of a papaya BAC library as a foundation for molecular dissection of a tree-fruit genome Theoretical and Applied Genetics. 102: 892-899. DOI: 10.1007/s001220000448  1
1999 Kyetere DT, Ming R, McMullen MD, Pratt RC, Brewbaker J, Musket T. Genetic analysis of tolerance to maize streak virus in maize Genome. 42: 20-26.  1
1999 Ming R, Brewbaker JL, Moon HG, Musket TA, Holley RN, Pataky JK, McMullen MD. Identification of RFLP markers linked to a major gene, sw1, conferring resistance to Stewart's wilt in maize Maydica. 44: 319-323.  1
1997 Ming R, Brewbaker JL, Pratt RC, Musket TA, McMullen MD. Molecular mapping of a major gone conferring resistance to maize mosaic virus Theoretical and Applied Genetics. 95: 271-275. DOI: 10.1007/s001220050559  1
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