Year |
Citation |
Score |
2024 |
Sievert MAC, Singh PP, Shoue DA, Checkley LA, Brenneman KM, Qahash T, Cassady Z, Kumar S, Li X, Nosten FH, Anderson TJC, Vaughan AM, Romero-Severson J, Ferdig MT. Measuring Growth, Resistance, and Recovery after Artemisinin Treatment of Plasmodium falciparum in a single semi-high-throughput Assay. Biorxiv : the Preprint Server For Biology. PMID 39605531 DOI: 10.1101/2024.11.11.623064 |
0.306 |
|
2024 |
Wong W, Wang L, Schaffner SS, Li X, Cheeseman I, Anderson TJC, Vaughan A, Ferdig M, Volkman SK, Hartl DL, Wirth DF. MalKinID: A Classification Model for Identifying Malaria Parasite Genealogical Relationships Using Identity-by-Descent. Genetics. PMID 39579070 DOI: 10.1093/genetics/iyae197 |
0.325 |
|
2024 |
Wong W, Wang L, Schaffner SS, Li X, Cheeseman I, Anderson TJC, Vaughan A, Ferdig M, Volkman SK, Hartl DL, Wirth DF. MalKinID: A Likelihood-Based Model for Identifying Malaria Parasite Genealogical Relationships Using Identity-by-Descent. Biorxiv : the Preprint Server For Biology. PMID 39071294 DOI: 10.1101/2024.07.12.603328 |
0.33 |
|
2024 |
Li Q, Button-Simons KA, Sievert MAC, Chahoud E, Foster GF, Meis K, Ferdig MT, Milenković T. Enhancing Gene Co-Expression Network Inference for the Malaria Parasite . Genes. 15. PMID 38927622 DOI: 10.3390/genes15060685 |
0.382 |
|
2024 |
Kane J, Li X, Kumar S, Button-Simons KA, Vendrely Brenneman KM, Dahlhoff H, Sievert MAC, Checkley LA, Shoue DA, Singh PP, Abatiyow BA, Haile MT, Nair S, Reyes A, Tripura R, ... ... Ferdig MT, et al. A genetic cross reveals the contributions of and to piperaquine drug resistance. Mbio. e0080524. PMID 38912775 DOI: 10.1128/mbio.00805-24 |
0.425 |
|
2023 |
Kane J, Li X, Kumar S, Button-Simons KA, Vendrely Brenneman KM, Dahlhoff H, Sievert MAC, Checkley LA, Shoue DA, Singh PP, Abatiyow BA, Haile MT, Nair S, Reyes A, Tripura R, ... ... Ferdig MT, et al. A genetic cross reveals the contributions of and to piperaquine drug resistance. Biorxiv : the Preprint Server For Biology. PMID 37745488 DOI: 10.1101/2023.06.06.543862 |
0.396 |
|
2023 |
Amambua-Ngwa A, Button-Simons KA, Li X, Kumar S, Brenneman KV, Ferrari M, Checkley LA, Haile MT, Shoue DA, McDew-White M, Tindall SM, Reyes A, Delgado E, Dalhoff H, Larbalestier JK, ... ... Ferdig MT, et al. Chloroquine resistance evolution in Plasmodium falciparum is mediated by the putative amino acid transporter AAT1. Nature Microbiology. PMID 37169919 DOI: 10.1038/s41564-023-01377-z |
0.421 |
|
2023 |
Pires CV, Oberstaller J, Wang C, Casandra D, Zhang M, Chawla J, Adapa SR, Otto TD, Ferdig MT, Rayner JC, Jiang RHY, Adams JH. Chemogenomic Profiling of a Plasmodium falciparum Transposon Mutant Library Reveals Shared Effects of Dihydroartemisinin and Bortezomib on Lipid Metabolism and Exported Proteins. Microbiology Spectrum. e0501422. PMID 37067430 DOI: 10.1128/spectrum.05014-22 |
0.388 |
|
2022 |
Kumar S, Li X, McDew-White M, Reyes A, Delgado E, Sayeed A, Haile MT, Abatiyow BA, Kennedy SY, Camargo N, Checkley LA, Brenneman KV, Button-Simons KA, Duraisingh MT, Cheeseman IH, ... ... Ferdig MT, et al. A Malaria Parasite Cross Reveals Genetic Determinants of Growth in Different Culture Media. Frontiers in Cellular and Infection Microbiology. 12: 878496. PMID 35711667 DOI: 10.3389/fcimb.2022.878496 |
0.383 |
|
2022 |
Brenneman KV, Li X, Kumar S, Delgado E, Checkley LA, Shoue DA, Reyes A, Abatiyow BA, Haile MT, Tripura R, Peto T, Lek D, Button-Simons KA, Kappe SHI, Dhorda M, ... ... Ferdig MT, et al. Optimizing bulk segregant analysis of drug resistance using genetic crosses conducted in humanized mice. Iscience. 25: 104095. PMID 35372813 DOI: 10.1016/j.isci.2022.104095 |
0.364 |
|
2022 |
Foster GJ, Sievert MAC, Button-Simons K, Vendrely KM, Romero-Severson J, Ferdig MT. Cyclical regression covariates remove the major confounding effect of cyclical developmental gene expression with strain-specific drug response in the malaria parasite Plasmodium falciparum. Bmc Genomics. 23: 180. PMID 35247977 DOI: 10.1186/s12864-021-08281-y |
0.344 |
|
2021 |
Zhang M, Wang C, Oberstaller J, Thomas P, Otto TD, Casandra D, Boyapalle S, Adapa SR, Xu S, Button-Simons K, Mayho M, Rayner JC, Ferdig MT, Jiang RHY, Adams JH. The apicoplast link to fever-survival and artemisinin-resistance in the malaria parasite. Nature Communications. 12: 4563. PMID 34315897 DOI: 10.1038/s41467-021-24814-1 |
0.424 |
|
2021 |
Button-Simons KA, Kumar S, Carmago N, Haile MT, Jett C, Checkley LA, Kennedy SY, Pinapati RS, Shoue DA, McDew-White M, Li X, Nosten FH, Kappe SH, Anderson TJC, Romero-Severson J, ... Ferdig MT, et al. The power and promise of genetic mapping from Plasmodium falciparum crosses utilizing human liver-chimeric mice. Communications Biology. 4: 734. PMID 34127785 DOI: 10.1038/s42003-021-02210-1 |
0.308 |
|
2020 |
Davis SZ, Singh PP, Vendrely KM, Shoue DA, Checkley LA, McDew-White M, Button-Simons KA, Cassady Z, Sievert MAC, Foster GJ, Nosten FH, Anderson TJC, Ferdig MT. The extended recovery ring-stage survival assay provides a superior association with patient clearance half-life and increases throughput. Malaria Journal. 19: 54. PMID 32005233 DOI: 10.1186/S12936-020-3139-6 |
0.376 |
|
2019 |
Li X, Kumar S, McDew-White M, Haile M, Cheeseman IH, Emrich S, Button-Simons K, Nosten F, Kappe SHI, Ferdig MT, Anderson TJC, Vaughan AM. Genetic mapping of fitness determinants across the malaria parasite Plasmodium falciparum life cycle. Plos Genetics. 15: e1008453. PMID 31609965 DOI: 10.1371/Journal.Pgen.1008453 |
0.525 |
|
2019 |
Tirrell AR, Vendrely KM, Checkley LA, Davis SZ, McDew-White M, Cheeseman IH, Vaughan AM, Nosten FH, Anderson TJC, Ferdig MT. Pairwise growth competitions identify relative fitness relationships among artemisinin resistant Plasmodium falciparum field isolates. Malaria Journal. 18: 295. PMID 31462253 DOI: 10.1186/S12936-019-2934-4 |
0.499 |
|
2018 |
Gibbons J, Button-Simons KA, Adapa SR, Li S, Pietsch M, Zhang M, Liao X, Adams JH, Ferdig MT, Jiang RHY. Altered expression of K13 disrupts DNA replication and repair in Plasmodium falciparum. Bmc Genomics. 19: 849. PMID 30486796 DOI: 10.1186/S12864-018-5207-7 |
0.341 |
|
2017 |
Turnbull LB, Siwo GH, Button-Simons KA, Tan A, Checkley LA, Painter HJ, Llinás M, Ferdig MT. Simultaneous genome-wide gene expression and transcript isoform profiling in the human malaria parasite. Plos One. 12: e0187595. PMID 29112986 DOI: 10.1371/Journal.Pone.0187595 |
0.393 |
|
2017 |
Rice DR, de Lourdes Betancourt Mendiola M, Murillo-Solano C, Checkley LA, Ferdig MT, Pizarro JC, Smith BD. Antiplasmodial activity of targeted zinc(II)-dipicolylamine complexes. Bioorganic & Medicinal Chemistry. PMID 28377170 DOI: 10.1016/J.Bmc.2017.03.050 |
0.361 |
|
2016 |
Miles A, Iqbal Z, Vauterin P, Pearson R, Campino S, Theron M, Gould K, Mead D, Drury E, O'Brien J, Ruano Rubio V, MacInnis B, Mwangi J, Samarakoon U, Ranford-Cartwright L, ... Ferdig M, et al. Indels, structural variation, and recombination drive genomic diversity in Plasmodium falciparum. Genome Research. PMID 27531718 DOI: 10.1101/Gr.203711.115 |
0.759 |
|
2016 |
Van Voorhis WC, Adams JH, Adelfio R, Ahyong V, Akabas MH, Alano P, Alday A, Alemán Resto Y, Alsibaee A, Alzualde A, Andrews KT, Avery SV, Avery VM, Ayong L, Baker M, ... ... Ferdig MT, et al. Open Source Drug Discovery with the Malaria Box Compound Collection for Neglected Diseases and Beyond. Plos Pathogens. 12: e1005763. PMID 27467575 DOI: 10.1371/Journal.Ppat.1005763 |
0.402 |
|
2016 |
Siwo G, Rider A, Tan A, Pinapati R, Emrich S, Chawla N, Ferdig M. Prediction of fine-tuned promoter activity from DNA sequence. F1000research. 5: 158. PMID 27347373 DOI: 10.12688/F1000Research.7485.1 |
0.309 |
|
2016 |
Jeffers V, Gao H, Checkley LA, Liu Y, Ferdig MT, Sullivan WJ. Garcinol inhibits GCN5-mediated lysine acetyltransferase activity and prevents replication of the parasite Toxoplasma gondii. Antimicrobial Agents and Chemotherapy. PMID 26810649 DOI: 10.1128/Aac.03059-15 |
0.401 |
|
2015 |
Siwo GH, Smith RS, Tan A, Button-Simons KA, Checkley LA, Ferdig MT. An integrative analysis of small molecule transcriptional responses in the human malaria parasite Plasmodium falciparum. Bmc Genomics. 16: 1030. PMID 26637195 DOI: 10.1186/S12864-015-2165-1 |
0.405 |
|
2015 |
Cheeseman IH, Miller B, Tan JC, Tan A, Nair S, Nkhoma SC, De Donato M, Rodulfo H, Dondorp A, Branch OH, Mesia LR, Newton P, Mayxay M, Amambua-Ngwa A, Conway DJ, ... ... Ferdig MT, et al. Population structure shapes copy number variation in malaria parasites. Molecular Biology and Evolution. PMID 26613787 DOI: 10.1093/Molbev/Msv282 |
0.607 |
|
2015 |
Pradhan A, Siwo GH, Singh N, Martens B, Balu B, Button-Simons KA, Tan A, Zhang M, Udenze KO, Jiang RH, Ferdig MT, Adams JH, Kyle DE. Chemogenomic profiling of Plasmodium falciparum as a tool to aid antimalarial drug discovery. Scientific Reports. 5: 15930. PMID 26541648 DOI: 10.1038/Srep15930 |
0.406 |
|
2015 |
Benmerzouga I, Checkley LA, Ferdig MT, Arrizabalaga G, Wek RC, Sullivan WJ. Guanabenz repurposed as an antiparasitic with activity against acute and latent toxoplasmosis. Antimicrobial Agents and Chemotherapy. 59: 6939-45. PMID 26303803 DOI: 10.1128/Aac.01683-15 |
0.355 |
|
2015 |
Vaughan AM, Pinapati RS, Cheeseman IH, Camargo N, Fishbaugher M, Checkley LA, Nair S, Hutyra CA, Nosten FH, Anderson TJ, Ferdig MT, Kappe SH. Plasmodium falciparum genetic crosses in a humanized mouse model. Nature Methods. 12: 631-3. PMID 26030447 DOI: 10.1038/Nmeth.3432 |
0.495 |
|
2015 |
Merrick CJ, Jiang RH, Skillman KM, Samarakoon U, Moore RM, Dzikowski R, Ferdig MT, Duraisingh MT. Functional analysis of sirtuin genes in multiple Plasmodium falciparum strains. Plos One. 10: e0118865. PMID 25780929 DOI: 10.1371/Journal.Pone.0118865 |
0.715 |
|
2015 |
Siwo GH, Tan A, Button-Simons KA, Samarakoon U, Checkley LA, Pinapati RS, Ferdig MT. Predicting functional and regulatory divergence of a drug resistance transporter gene in the human malaria parasite. Bmc Genomics. 16: 115. PMID 25765049 DOI: 10.1186/S12864-015-1261-6 |
0.745 |
|
2015 |
Takala-Harrison S, Jacob CG, Arze C, Cummings MP, Silva JC, Dondorp AM, Fukuda MM, Hien TT, Mayxay M, Noedl H, Nosten F, Kyaw MP, Nhien NT, Imwong M, Bethell D, ... ... Ferdig MT, et al. Independent emergence of artemisinin resistance mutations among Plasmodium falciparum in Southeast Asia. The Journal of Infectious Diseases. 211: 670-9. PMID 25180241 DOI: 10.1093/Infdis/Jiu491 |
0.412 |
|
2014 |
Jacob CG, Tan JC, Miller BA, Tan A, Takala-Harrison S, Ferdig MT, Plowe CV. A microarray platform and novel SNP calling algorithm to evaluate Plasmodium falciparum field samples of low DNA quantity. Bmc Genomics. 15: 719. PMID 25159520 DOI: 10.1186/1471-2164-15-719 |
0.64 |
|
2014 |
Sanchez CP, Liu CH, Mayer S, Nurhasanah A, Cyrklaff M, Mu J, Ferdig MT, Stein WD, Lanzer M. A HECT ubiquitin-protein ligase as a novel candidate gene for altered quinine and quinidine responses in Plasmodium falciparum. Plos Genetics. 10: e1004382. PMID 24830312 DOI: 10.1371/Journal.Pgen.1004382 |
0.49 |
|
2014 |
Gaji RY, Checkley L, Reese ML, Ferdig MT, Arrizabalaga G. Expression of the essential Kinase PfCDPK1 from Plasmodium falciparum in Toxoplasma gondii facilitates the discovery of novel antimalarial drugs. Antimicrobial Agents and Chemotherapy. 58: 2598-607. PMID 24550330 DOI: 10.1128/Aac.02261-13 |
0.373 |
|
2014 |
Lewis IA, Wacker M, Olszewski KL, Cobbold SA, Baska KS, Tan A, Ferdig MT, Llinás M. Metabolic QTL analysis links chloroquine resistance in Plasmodium falciparum to impaired hemoglobin catabolism. Plos Genetics. 10: e1004085. PMID 24391526 DOI: 10.1371/Journal.Pgen.1004085 |
0.788 |
|
2014 |
Hrycyna CA, Summers RL, Lehane AM, Pires MM, Namanja H, Bohn K, Kuriakose J, Ferdig M, Henrich PP, Fidock DA, Kirk K, Chmielewski J, Martin RE. Quinine dimers are potent inhibitors of the Plasmodium falciparum chloroquine resistance transporter and are active against quinoline-resistant P. falciparum. Acs Chemical Biology. 9: 722-30. PMID 24369685 DOI: 10.1021/Cb4008953 |
0.472 |
|
2013 |
Gaviria D, Paguio MF, Turnbull LB, Tan A, Siriwardana A, Ghosh D, Ferdig MT, Sinai AP, Roepe PD. A process similar to autophagy is associated with cytocidal chloroquine resistance in Plasmodium falciparum. Plos One. 8: e79059. PMID 24278114 DOI: 10.1371/Journal.Pone.0079059 |
0.508 |
|
2013 |
Agrawal S, Chung DW, Ponts N, van Dooren GG, Prudhomme J, Brooks CF, Rodrigues EM, Tan JC, Ferdig MT, Striepen B, Le Roch KG. An apicoplast localized ubiquitylation system is required for the import of nuclear-encoded plastid proteins. Plos Pathogens. 9: e1003426. PMID 23785288 DOI: 10.1371/Journal.Ppat.1003426 |
0.404 |
|
2013 |
Heinberg A, Siu E, Stern C, Lawrence EA, Ferdig MT, Deitsch KW, Kirkman LA. Direct evidence for the adaptive role of copy number variation on antifolate susceptibility in Plasmodium falciparum. Molecular Microbiology. 88: 702-12. PMID 23347134 DOI: 10.1111/Mmi.12162 |
0.477 |
|
2013 |
Tan JC, Ferdig MT. Genetic Crosses in Plasmodium Falciparum: Analysis of Drug Resistance Evolution of Virulence in Eukaryotic Microbes. 247-268. DOI: 10.1002/9781118308165.ch13 |
0.425 |
|
2012 |
Griffin CE, Hoke JM, Samarakoon U, Duan J, Mu J, Ferdig MT, Warhurst DC, Cooper RA. Mutation in the Plasmodium falciparum CRT protein determines the stereospecific activity of antimalarial cinchona alkaloids. Antimicrobial Agents and Chemotherapy. 56: 5356-64. PMID 22869567 DOI: 10.1128/Aac.05667-11 |
0.728 |
|
2012 |
Manske M, Miotto O, Campino S, Auburn S, Almagro-Garcia J, Maslen G, O'Brien J, Djimde A, Doumbo O, Zongo I, Ouedraogo JB, Michon P, Mueller I, Siba P, Nzila A, ... ... Ferdig MT, et al. Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing. Nature. 487: 375-9. PMID 22722859 DOI: 10.1038/Nature11174 |
0.506 |
|
2012 |
Wacker MA, Turnbull LB, Walker LA, Mount MC, Ferdig MT. Quantification of multiple infections of Plasmodium falciparum in vitro. Malaria Journal. 11: 180. PMID 22646748 DOI: 10.1186/1475-2875-11-180 |
0.754 |
|
2012 |
Cheeseman IH, Miller BA, Nair S, Nkhoma S, Tan A, Tan JC, Al Saai S, Phyo AP, Moo CL, Lwin KM, McGready R, Ashley E, Imwong M, Stepniewska K, Yi P, ... ... Ferdig MT, et al. A major genome region underlying artemisinin resistance in malaria. Science (New York, N.Y.). 336: 79-82. PMID 22491853 DOI: 10.1126/Science.1215966 |
0.658 |
|
2012 |
Huang Y, Siwo G, Wuchty S, Ferdig MT, Przytycka TM. Symmetric Epistasis Estimation (SEE) and its application to dissecting interaction map of Plasmodium falciparum. Molecular Biosystems. 8: 1544-52. PMID 22419061 DOI: 10.1039/C2Mb05333K |
0.431 |
|
2011 |
Pelleau S, Bertaux L, Briolant S, Ferdig MT, Sinou V, Pradines B, Parzy D, Jambou R. Differential association of Plasmodium falciparum Na+/H+ exchanger polymorphism and quinine responses in field- and culture-adapted isolates of Plasmodium falciparum. Antimicrobial Agents and Chemotherapy. 55: 5834-41. PMID 21947391 DOI: 10.1128/Aac.00477-11 |
0.4 |
|
2011 |
Samarakoon U, Gonzales JM, Patel JJ, Tan A, Checkley L, Ferdig MT. The landscape of inherited and de novo copy number variants in a Plasmodium falciparum genetic cross. Bmc Genomics. 12: 457. PMID 21936954 DOI: 10.1186/1471-2164-12-457 |
0.759 |
|
2011 |
Wuchty S, Siwo GH, Ferdig MT. Shared molecular strategies of the malaria parasite P. falciparum and the human virus HIV-1. Molecular & Cellular Proteomics : McP. 10: M111.009035. PMID 21586753 DOI: 10.1074/Mcp.M111.009035 |
0.395 |
|
2011 |
Tan JC, Miller BA, Tan A, Patel JJ, Cheeseman IH, Anderson TJ, Manske M, Maslen G, Kwiatkowski DP, Ferdig MT. An optimized microarray platform for assaying genomic variation in Plasmodium falciparum field populations. Genome Biology. 12: R35. PMID 21477297 DOI: 10.1186/Gb-2011-12-4-R35 |
0.652 |
|
2011 |
Samarakoon U, Regier A, Tan A, Desany BA, Collins B, Tan JC, Emrich SJ, Ferdig MT. High-throughput 454 resequencing for allele discovery and recombination mapping in Plasmodium falciparum. Bmc Genomics. 12: 116. PMID 21324207 DOI: 10.1186/1471-2164-12-116 |
0.727 |
|
2011 |
Miller MJ, Walz AJ, Zhu H, Wu C, Moraski G, Möllmann U, Tristani EM, Crumbliss AL, Ferdig MT, Checkley L, Edwards RL, Boshoff HI. Design, synthesis, and study of a mycobactin-artemisinin conjugate that has selective and potent activity against tuberculosis and malaria. Journal of the American Chemical Society. 133: 2076-9. PMID 21275374 DOI: 10.1021/Ja109665T |
0.308 |
|
2010 |
Rider AK, Siwo G, Chawla NV, Ferdig M, Emrich SJ. A statistical approach to finding overlooked genetic associations. Bmc Bioinformatics. 11: 526. PMID 20964847 DOI: 10.1186/1471-2105-11-526 |
0.366 |
|
2010 |
Reilly Ayala HB, Wacker MA, Siwo G, Ferdig MT. Quantitative trait loci mapping reveals candidate pathways regulating cell cycle duration in Plasmodium falciparum. Bmc Genomics. 11: 577. PMID 20955606 DOI: 10.1186/1471-2164-11-577 |
0.772 |
|
2010 |
Wuchty S, Siwo G, Ferdig MT. Viral organization of human proteins. Plos One. 5: e11796. PMID 20827298 DOI: 10.1371/Journal.Pone.0011796 |
0.306 |
|
2010 |
Patel JJ, Thacker D, Tan JC, Pleeter P, Checkley L, Gonzales JM, Deng B, Roepe PD, Cooper RA, Ferdig MT. Chloroquine susceptibility and reversibility in a Plasmodium falciparum genetic cross. Molecular Microbiology. 78: 770-87. PMID 20807203 DOI: 10.1111/J.1365-2958.2010.07366.X |
0.637 |
|
2010 |
Tan JC, Tan A, Checkley L, Honsa CM, Ferdig MT. Variable numbers of tandem repeats in Plasmodium falciparum genes. Journal of Molecular Evolution. 71: 268-78. PMID 20730584 DOI: 10.1007/S00239-010-9381-8 |
0.445 |
|
2009 |
Anderson TJ, Patel J, Ferdig MT. Gene copy number and malaria biology. Trends in Parasitology. 25: 336-43. PMID 19559648 DOI: 10.1016/J.Pt.2009.04.005 |
0.599 |
|
2009 |
Huang Y, Wuchty S, Ferdig MT, Przytycka TM. Graph theoretical approach to study eQTL: a case study of Plasmodium falciparum. Bioinformatics (Oxford, England). 25: i15-20. PMID 19477981 DOI: 10.1093/Bioinformatics/Btp189 |
0.402 |
|
2009 |
Roepe PD, Ferdig MT. P. falciparum Na(+)/H(+) exchanger (PfNHE) function and quinine resistance (QNR) [Reply to: Spillman et al. "Acid extrusion from the intraerythrocytic malaria parasite is not via a Na(+)/H(+) exchanger" Mol. Biochem. Parasitol. 2008 162 (1) 96-99]. Molecular and Biochemical Parasitology. 166: 1-2; author reply 3. PMID 19428665 DOI: 10.1016/J.Molbiopara.2009.01.008 |
0.323 |
|
2009 |
Nkrumah LJ, Riegelhaupt PM, Moura P, Johnson DJ, Patel J, Hayton K, Ferdig MT, Wellems TE, Akabas MH, Fidock DA. Probing the multifactorial basis of Plasmodium falciparum quinine resistance: evidence for a strain-specific contribution of the sodium-proton exchanger PfNHE. Molecular and Biochemical Parasitology. 165: 122-31. PMID 19428659 DOI: 10.1016/J.Molbiopara.2009.01.011 |
0.605 |
|
2009 |
Wuchty S, Adams JH, Ferdig MT. A comprehensive Plasmodium falciparum protein interaction map reveals a distinct architecture of a core interactome. Proteomics. 9: 1841-9. PMID 19333996 DOI: 10.1002/Pmic.200800383 |
0.352 |
|
2009 |
Tan JC, Patel JJ, Tan A, Blain JC, Albert TJ, Lobo NF, Ferdig MT. Optimizing comparative genomic hybridization probes for genotyping and SNP detection in Plasmodium falciparum. Genomics. 93: 543-50. PMID 19285129 DOI: 10.1016/J.Ygeno.2009.02.007 |
0.554 |
|
2008 |
Nair S, Miller B, Barends M, Jaidee A, Patel J, Mayxay M, Newton P, Nosten F, Ferdig MT, Anderson TJ. Adaptive copy number evolution in malaria parasites. Plos Genetics. 4: e1000243. PMID 18974876 DOI: 10.1371/Journal.Pgen.1000243 |
0.72 |
|
2008 |
Gonzales JM, Patel JJ, Ponmee N, Jiang L, Tan A, Maher SP, Wuchty S, Rathod PK, Ferdig MT. Regulatory hotspots in the malaria parasite genome dictate transcriptional variation. Plos Biology. 6: e238. PMID 18828674 DOI: 10.1371/Journal.Pbio.0060238 |
0.661 |
|
2008 |
Jiang H, Patel JJ, Yi M, Mu J, Ding J, Stephens R, Cooper RA, Ferdig MT, Su XZ. Genome-wide compensatory changes accompany drug- selected mutations in the Plasmodium falciparum crt gene. Plos One. 3: e2484. PMID 18575593 DOI: 10.1371/Journal.Pone.0002484 |
0.643 |
|
2007 |
Reilly HB, Wang H, Steuter JA, Marx AM, Ferdig MT. Quantitative dissection of clone-specific growth rates in cultured malaria parasites. International Journal For Parasitology. 37: 1599-607. PMID 17585919 DOI: 10.1016/J.Ijpara.2007.05.003 |
0.77 |
|
2007 |
Bennett TN, Patel J, Ferdig MT, Roepe PD. Plasmodium falciparum Na+/H+ exchanger activity and quinine resistance. Molecular and Biochemical Parasitology. 153: 48-58. PMID 17353059 DOI: 10.1016/J.Molbiopara.2007.01.018 |
0.623 |
|
2007 |
Tanriverdi S, Blain JC, Deng B, Ferdig MT, Widmer G. Genetic crosses in the apicomplexan parasite Cryptosporidium parvum define recombination parameters. Molecular Microbiology. 63: 1432-9. PMID 17302818 DOI: 10.1111/J.1365-2958.2007.05594.X |
0.362 |
|
2007 |
Cooper RA, Lane KD, Deng B, Mu J, Patel JJ, Wellems TE, Su X, Ferdig MT. Mutations in transmembrane domains 1, 4 and 9 of the Plasmodium falciparum chloroquine resistance transporter alter susceptibility to chloroquine, quinine and quinidine. Molecular Microbiology. 63: 270-82. PMID 17163969 DOI: 10.1111/J.1365-2958.2006.05511.X |
0.571 |
|
2006 |
Rohrbach P, Sanchez CP, Hayton K, Friedrich O, Patel J, Sidhu AB, Ferdig MT, Fidock DA, Lanzer M. Genetic linkage of pfmdr1 with food vacuolar solute import in Plasmodium falciparum. The Embo Journal. 25: 3000-11. PMID 16794577 DOI: 10.1038/Sj.Emboj.7601203 |
0.595 |
|
2006 |
Duraisingh M, Ferdig MT, Stoeckert CJ, Volkman SK, McGovern VP. Plasmodium research in the postgenomic era. Trends in Parasitology. 22: 1-4. PMID 16311071 DOI: 10.1016/J.Pt.2005.11.011 |
0.352 |
|
2005 |
Cooper RA, Hartwig CL, Ferdig MT. pfcrt is more than the Plasmodium falciparum chloroquine resistance gene: a functional and evolutionary perspective. Acta Tropica. 94: 170-80. PMID 15866507 DOI: 10.1016/J.Actatropica.2005.04.004 |
0.505 |
|
2004 |
Ferdig MT, Cooper RA, Mu J, Deng B, Joy DA, Su XZ, Wellems TE. Dissecting the loci of low-level quinine resistance in malaria parasites. Molecular Microbiology. 52: 985-97. PMID 15130119 DOI: 10.1111/J.1365-2958.2004.04035.X |
0.482 |
|
2004 |
Sen S, Ferdig M. QTL analysis for discovery of genes involved in drug responses. Current Drug Targets. Infectious Disorders. 4: 53-63. PMID 15032634 DOI: 10.2174/1568005043480916 |
0.536 |
|
2003 |
Besansky NJ, Severson DW, Ferdig MT. DNA barcoding of parasites and invertebrate disease vectors: what you don't know can hurt you. Trends in Parasitology. 19: 545-6. PMID 14642760 DOI: 10.1016/J.Pt.2003.09.015 |
0.312 |
|
2003 |
Mu J, Ferdig MT, Feng X, Joy DA, Duan J, Furuya T, Subramanian G, Aravind L, Cooper RA, Wootton JC, Xiong M, Su XZ. Multiple transporters associated with malaria parasite responses to chloroquine and quinine. Molecular Microbiology. 49: 977-89. PMID 12890022 DOI: 10.1046/J.1365-2958.2003.03627.X |
0.51 |
|
2002 |
Su XZ, Ferdig MT. Microsatellite analysis in Plasmodium falciparum. Methods in Molecular Medicine. 72: 131-6. PMID 12125109 DOI: 10.1385/1-59259-271-6:131 |
0.423 |
|
2002 |
Wootton JC, Feng X, Ferdig MT, Cooper RA, Mu J, Baruch DI, Magill AJ, Su XZ. Genetic diversity and chloroquine selective sweeps in Plasmodium falciparum. Nature. 418: 320-3. PMID 12124623 DOI: 10.1038/Nature00813 |
0.561 |
|
2002 |
Zhang P, Nicholson DE, Bujnicki JM, Su X, Brendle JJ, Ferdig M, Kyle DE, Milhous WK, Chiang PK. Angiogenesis inhibitors specific for methionine aminopeptidase 2 as drugs for malaria and leishmaniasis. Journal of Biomedical Science. 9: 34-40. PMID 11810023 DOI: 10.1007/Bf02256576 |
0.443 |
|
2002 |
Cooper RA, Ferdig MT, Su XZ, Ursos LM, Mu J, Nomura T, Fujioka H, Fidock DA, Roepe PD, Wellems TE. Alternative mutations at position 76 of the vacuolar transmembrane protein PfCRT are associated with chloroquine resistance and unique stereospecific quinine and quinidine responses in Plasmodium falciparum. Molecular Pharmacology. 61: 35-42. PMID 11752204 DOI: 10.1124/Mol.61.1.35 |
0.424 |
|
2000 |
Fidock DA, Nomura T, Talley AK, Cooper RA, Dzekunov SM, Ferdig MT, Ursos LM, Sidhu AB, Naudé B, Deitsch KW, Su XZ, Wootton JC, Roepe PD, Wellems TE. Mutations in the P. falciparum digestive vacuole transmembrane protein PfCRT and evidence for their role in chloroquine resistance. Molecular Cell. 6: 861-71. PMID 11090624 DOI: 10.1016/S1097-2765(05)00077-8 |
0.414 |
|
2000 |
Ferdig MT, Taft AS, Smartt CT, Lowenberger CA, Li J, Zhang J, Christensen BM. Aedes aegypti dopa decarboxylase: gene structure and regulation. Insect Molecular Biology. 9: 231-9. PMID 10886406 DOI: 10.1046/J.1365-2583.2000.00187.X |
0.344 |
|
2000 |
Ferdig MT, Su XZ. Microsatellite markers and genetic mapping in Plasmodium falciparum Parasitology Today. 16: 307-312. PMID 10858651 DOI: 10.1016/S0169-4758(00)01676-8 |
0.394 |
|
2000 |
Taylor JG, Ferdig MT, Su XZ, Wellems TE. Toward quantitative genetic analysis of host and parasite traits in the manifestations of Plasmodium falciparum malaria Current Opinion in Genetics and Development. 10: 314-319. PMID 10826985 DOI: 10.1016/S0959-437X(00)00077-0 |
0.491 |
|
2000 |
Ferdig MT, Deitsch KW. Parasitology and Vector Biology (2nd edn) by W.C. Marquardt, R.S. Demaree and R.B. Grieve Parasitology Today. 16: 406. DOI: 10.1016/S0169-4758(00)01737-3 |
0.413 |
|
1999 |
Su XZ, Ferdig MT, Huang Y, Huynh CQ, Liu A, You J, Wootton JC, Wellems TE. A genetic map and recombination parameters of the human malaria parasite Plasmodium falciparum Science. 286: 1351-1353. PMID 10558988 DOI: 10.1126/Science.286.5443.1351 |
0.479 |
|
1999 |
Wellems TE, Su XZ, Ferdig M, Fidock DA. Genome projects, genetic analysis, and the changing landscape of malaria research Current Opinion in Microbiology. 2: 415-419. PMID 10458983 DOI: 10.1016/S1369-5274(99)80073-3 |
0.481 |
|
1999 |
Lowenberger CA, Smartt CT, Bulet P, Ferdig MT, Severson DW, Hoffmann JA, Christensen BM. Insect immunity: molecular cloning, expression, and characterization of cDNAs and genomic DNA encoding three isoforms of insect defensin in Aedes aegypti. Insect Molecular Biology. 8: 107-18. PMID 9927179 DOI: 10.1046/J.1365-2583.1999.810107.X |
0.31 |
|
1998 |
Ferdig MT, Taft AS, Severson DW, Christensen BM. Development of a comparative genetic linkage map for Armigeres subalbatus using Aedes aegypti RFLP markers. Genome Research. 8: 41-7. PMID 9445486 DOI: 10.1101/Gr.8.1.41 |
0.443 |
|
1996 |
Lowenberger CA, Ferdig MT, Bulet P, Khalili S, Hoffmann JA, Christensen BM. Aedes aegypti: induced antibacterial proteins reduce the establishment and development of Brugia malayi. Experimental Parasitology. 83: 191-201. PMID 8682188 DOI: 10.1006/Expr.1996.0066 |
0.371 |
|
1993 |
Ferdig MT, Beerntsen BT, Spray FJ, Li J, Christensen BM. Reproductive costs associated with resistance in a mosquito-filarial worm system American Journal of Tropical Medicine and Hygiene. 49: 756-762. PMID 7904130 DOI: 10.4269/Ajtmh.1993.49.756 |
0.384 |
|
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