Nils Arrigo - Publications

EEB, University of Arizona 
Evolution, Hybridization, Introgression, Phylogeography

40 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Gauthier J, Mouden C, Suchan T, Alvarez N, Arrigo N, Riou C, Lemaitre C, Peterlongo P. DiscoSnp-RAD: de novo detection of small variants for RAD-Seq population genomics. Peerj. 8: e9291. PMID 32566401 DOI: 10.7717/peerj.9291  0.52
2019 Baniaga AE, Marx HE, Arrigo N, Barker MS. Polyploid plants have faster rates of multivariate niche differentiation than their diploid relatives. Ecology Letters. PMID 31637845 DOI: 10.1111/ele.13402  0.8
2017 Suchan T, Espíndola A, Rutschmann S, Emerson BC, Gori K, Dessimoz C, Arrigo N, Ronikier M, Alvarez N. Assessing the potential of RAD-sequencing to resolve phylogenetic relationships within species radiations: the fly genus Chiastocheta (Diptera: Anthomyiidae) as a case study. Molecular Phylogenetics and Evolution. PMID 28645767 DOI: 10.1016/j.ympev.2017.06.012  0.52
2017 Pitteloud C, Arrigo N, Suchan T, Mastretta-Yanes A, Vila R, Dincă V, Hernández-Roldán J, Brockmann E, Chittaro Y, Kleckova I, Fumagalli L, Buerki S, Pellissier L, Alvarez N. Climatic niche evolution is faster in sympatric than allopatric lineages of the butterfly genus Pyrgus. Proceedings. Biological Sciences. 284. PMID 28404781 DOI: 10.1098/rspb.2017.0208  0.52
2016 Arrigo N, de La Harpe M, Litsios G, Zozomová-Lihová J, Španiel S, Marhold K, Barker MS, Alvarez N. Is hybridization driving the evolution of climatic niche in Alyssum montanum. American Journal of Botany. PMID 27206461 DOI: 10.3732/ajb.1500368  0.68
2016 Baniaga AE, Arrigo N, Barker MS. The small nuclear genomes of Selaginella are associated with a low rate of genome size evolution. Genome Biology and Evolution. PMID 27189987 DOI: 10.1093/gbe/evw091  0.8
2016 Suchan T, Pitteloud C, Gerasimova NS, Kostikova A, Schmid S, Arrigo N, Pajkovic M, Ronikier M, Alvarez N. Hybridization Capture Using RAD Probes (hyRAD), a New Tool for Performing Genomic Analyses on Collection Specimens. Plos One. 11: e0151651. PMID 26999359 DOI: 10.1371/journal.pone.0151651  0.52
2016 Frey D, Arrigo N, Granereau G, Sarr A, Felber F, Kozlowski G. Parallel declines in species and genetic diversity driven by anthropogenic disturbance: a multispecies approach in a French Atlantic dune system. Evolutionary Applications. 9: 479-88. PMID 26989439 DOI: 10.1111/eva.12351  0.68
2016 Frey D, Arrigo N, Granereau G, Sarr A, Felber F, Kozlowski G. Parallel declines in species and genetic diversity driven by anthropogenic disturbance: A multispecies approach in a French Atlantic dune system Evolutionary Applications. DOI: 10.1111/eva.12351  0.68
2015 Geiser C, Mandáková T, Arrigo N, Lysak MA, Parisod C. Repeated whole-genome duplication, karyotype reshuffling and biased retention of stress-responding genes in Buckler Mustards. The Plant Cell. PMID 26668305 DOI: 10.1105/tpc.15.00791  0.68
2015 Barker MS, Arrigo N, Baniaga AE, Li Z, Levin DA. On the relative abundance of autopolyploids and allopolyploids. The New Phytologist. PMID 26439879 DOI: 10.1111/nph.13698  0.68
2015 Bone RE, Smith JA, Arrigo N, Buerki S. A macro-ecological perspective on crassulacean acid metabolism (CAM) photosynthesis evolution in Afro-Madagascan drylands: Eulophiinae orchids as a case study. The New Phytologist. PMID 26192467 DOI: 10.1111/nph.13572  0.52
2015 Mayrose I, Zhan SH, Rothfels CJ, Arrigo N, Barker MS, Rieseberg LH, Otto SP. Methods for studying polyploid diversification and the dead end hypothesis: a reply to Soltis et al. (2014). The New Phytologist. 206: 27-35. PMID 25472785 DOI: 10.1111/nph.13192  0.68
2015 Mastretta-Yanes A, Arrigo N, Alvarez N, Jorgensen TH, Piñero D, Emerson BC. Restriction site-associated DNA sequencing, genotyping error estimation and de novo assembly optimization for population genetic inference. Molecular Ecology Resources. 15: 28-41. PMID 24916682 DOI: 10.1111/1755-0998.12291  0.68
2015 Bone RE, Smith JAC, Arrigo N, Buerki S. A macro-ecological perspective on crassulacean acid metabolism (CAM) photosynthesis evolution in Afro-Madagascan drylands: Eulophiinae orchids as a case study New Phytologist. DOI: 10.1111/nph.13572  0.68
2015 Triponez Y, Arrigo N, Espíndola A, Alvarez N. Decoupled post-glacial history in mutualistic plant-insect interactions: Insights from the yellow loosestrife (Lysimachia vulgaris) and its associated oil-collecting bees (Macropis europaea and M. fulvipes) Journal of Biogeography. 42: 630-640. DOI: 10.1111/jbi.12456  0.68
2015 Delplancke M, Yazbek M, Arrigo N, Espíndola A, Joly H, Alvarez N. Combining conservative and variable markers to infer the evolutionary history of Prunus subgen. Amygdalus s.l. under domestication Genetic Resources and Crop Evolution. DOI: 10.1007/s10722-015-0242-6  0.68
2014 Mastretta-Yanes A, Zamudio S, Jorgensen TH, Arrigo N, Alvarez N, Piñero D, Emerson BC. Gene duplication, population genomics, and species-level differentiation within a tropical mountain shrub. Genome Biology and Evolution. 6: 2611-24. PMID 25223767 DOI: 10.1093/gbe/evu205  0.68
2014 Pajkovic M, Lappe S, Barman R, Parisod C, Neuenschwander S, Goudet J, Alvarez N, Guadagnuolo R, Felber F, Arrigo N. Wheat alleles introgress into selfing wild relatives: empirical estimates from approximate Bayesian computation in Aegilops triuncialis. Molecular Ecology. 23: 5089-101. PMID 25223217 DOI: 10.1111/mec.12918  0.68
2013 Arrigo N, Therrien J, Anderson CL, Windham MD, Haufler CH, Barker MS. A total evidence approach to understanding phylogenetic relationships and ecological diversity in Selaginella subg. Tetragonostachys. American Journal of Botany. 100: 1672-82. PMID 23935110 DOI: 10.3732/ajb.1200426  0.68
2013 Besnard G, Khadari B, Navascués M, Fernández-Mazuecos M, El Bakkali A, Arrigo N, Baali-Cherif D, Brunini-Bronzini de Caraffa V, Santoni S, Vargas P, Savolainen V. The complex history of the olive tree: from Late Quaternary diversification of Mediterranean lineages to primary domestication in the northern Levant. Proceedings. Biological Sciences / the Royal Society. 280: 20122833. PMID 23390107 DOI: 10.1098/rspb.2012.2833  0.68
2013 Triponez Y, Arrigo N, Pellissier L, Schatz B, Alvarez N. Morphological, ecological and genetic aspects associated with endemism in the Fly Orchid group. Molecular Ecology. 22: 1431-46. PMID 23331669 DOI: 10.1111/mec.12169  0.68
2013 Parisod C, Definod C, Sarr A, Arrigo N, Felber F. Genome-specific introgression between wheat and its wild relative Aegilops triuncialis. Journal of Evolutionary Biology. 26: 223-8. PMID 23205963 DOI: 10.1111/jeb.12040  0.68
2013 Delplancke M, Alvarez N, Benoit L, Espíndola A, I Joly H, Neuenschwander S, Arrigo N. Evolutionary history of almond tree domestication in the Mediterranean basin. Molecular Ecology. 22: 1092-104. PMID 23189975 DOI: 10.1111/mec.12129  0.68
2012 Delplancke M, Alvarez N, Espíndola A, Joly H, Benoit L, Brouck E, Arrigo N. Gene flow among wild and domesticated almond species: insights from chloroplast and nuclear markers. Evolutionary Applications. 5: 317-29. PMID 25568053 DOI: 10.1111/j.1752-4571.2011.00223.x  0.68
2012 Arrigo N, Albert LP, Mickelson PG, Barker MS. Quantitative visualization of biological data in Google Earth using R2G2, an R CRAN package. Molecular Ecology Resources. 12: 1177-9. PMID 22994899 DOI: 10.1111/1755-0998.12012  0.68
2012 Arrigo N, Holderegger R, Alvarez N. Automated scoring of AFLPs using RawGeno v 2.0, a free R CRAN library. Methods in Molecular Biology (Clifton, N.J.). 888: 155-75. PMID 22665281 DOI: 10.1007/978-1-61779-870-2_10  0.68
2012 Arrigo N, Barker MS. Rarely successful polyploids and their legacy in plant genomes. Current Opinion in Plant Biology. 15: 140-6. PMID 22480430 DOI: 10.1016/j.pbi.2012.03.010  0.68
2012 Bueno C, Ruckstuhl KE, Arrigo N, Aivaz AN, Neuhaus P. Impacts of cattle grazing on small-rodent communities: An experimental case study Canadian Journal of Zoology. 90: 22-30. DOI: 10.1139/Z11-108  0.68
2012 Borer M, Arrigo N, Buerki S, Naisbit RE, Alvarez N. Climate oscillations and species interactions: Large-scale congruence but regional differences in the phylogeographic structures of an alpine plant and its monophagous insect Journal of Biogeography. 39: 1487-1498. DOI: 10.1111/j.1365-2699.2012.02703.x  0.68
2012 Peintinger M, Arrigo N, Brodbeck S, Koller A, Imsand M, Holderegger R. Genetic differentiation of the endemic grass species Deschampsia littoralis at pre-Alpine lakes Alpine Botany. 122: 87-93. DOI: 10.1007/s00035-012-0107-y  0.68
2011 Arrigo N, Guadagnuolo R, Lappe S, Pasche S, Parisod C, Felber F. Gene flow between wheat and wild relatives: empirical evidence from Aegilops geniculata, Ae. neglecta and Ae. triuncialis. Evolutionary Applications. 4: 685-95. PMID 25568015 DOI: 10.1111/j.1752-4571.2011.00191.x  0.68
2011 Borer M, van Noort T, Arrigo N, Buerki S, Alvarez N. Does a shift in host plants trigger speciation in the Alpine leaf beetle Oreina speciosissima (Coleoptera, Chrysomelidae)? Bmc Evolutionary Biology. 11: 310. PMID 22014288 DOI: 10.1186/1471-2148-11-310  0.68
2011 Arrigo N, Buerki S, Sarr A, Guadagnuolo R, Kozlowski G. Phylogenetics and phylogeography of the monocot genus Baldellia (Alismataceae): Mediterranean refugia, suture zones and implications for conservation. Molecular Phylogenetics and Evolution. 58: 33-42. PMID 21095232 DOI: 10.1016/j.ympev.2010.11.009  0.68
2011 Buerki S, Forest F, Alvarez N, Nylander JA, Arrigo N, Sanmartín I. An evaluation of new parsimony-based versus parametric inference methods in biogeography: A case study using the globally distributed plant family Sapindaceae Journal of Biogeography. 38: 531-550. DOI: 10.1111/j.1365-2699.2010.02432.x  0.68
2010 Arrigo N, Felber F, Parisod C, Buerki S, Alvarez N, David J, Guadagnuolo R. Origin and expansion of the allotetraploid Aegilops geniculata, a wild relative of wheat. The New Phytologist. 187: 1170-80. PMID 20561204 DOI: 10.1111/j.1469-8137.2010.03328.x  0.68
2009 Burnier J, Buerki S, Arrigo N, Küpfer P, Alvarez N. Genetic structure and evolution of Alpine polyploid complexes: Ranunculus kuepferi (Ranunculaceae) as a case study. Molecular Ecology. 18: 3730-44. PMID 19674303 DOI: 10.1111/j.1365-294X.2009.04281.x  0.68
2009 Arrigo N, Tuszynski JW, Ehrich D, Gerdes T, Alvarez N. Evaluating the impact of scoring parameters on the structure of intra-specific genetic variation using RawGeno, an R package for automating AFLP scoring. Bmc Bioinformatics. 10: 33. PMID 19171029 DOI: 10.1186/1471-2105-10-33  0.68
2007 Arrigo N, Arnold C. Naturalised Vitis rootstocks in Europe and consequences to native wild grapevine. Plos One. 2: e521. PMID 17565374 DOI: 10.1371/journal.pone.0000521  0.68
2007 Felber F, Kozlowski G, Arrigo N, Guadagnuolo R. Genetic and ecological consequences of transgene flow to the wild flora. Advances in Biochemical Engineering/Biotechnology. 107: 173-205. PMID 17522826 DOI: 10.1007/10_2007_050  0.68
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