| Year |
Citation |
Score |
| 2024 |
Richards TA, Eme L, Archibald JM, Leonard G, Coelho SM, de Mendoza A, Dessimoz C, Dolezal P, Fritz-Laylin LK, Gabaldón T, Hampl V, Kops GJPL, Leger MM, Lopez-Garcia P, McInerney JO, et al. Reconstructing the last common ancestor of all eukaryotes. Plos Biology. 22: e3002917. PMID 39585925 DOI: 10.1371/journal.pbio.3002917 |
0.747 |
|
| 2023 |
Del Campo J, Carlos-Oliveira M, Čepička I, Hehenberger E, Horák A, Karnkowska A, Kolisko M, Lara E, Lukeš J, Pánek T, Piwosz K, Richter DJ, Škaloud P, Sutak R, Tachezy J, ... Hampl V, et al. The protist cultural renaissance. Trends in Microbiology. PMID 38102035 DOI: 10.1016/j.tim.2023.11.010 |
0.567 |
|
| 2023 |
Novák LVF, Treitli SC, Pyrih J, Hałakuc P, Pipaliya SV, Vacek V, Brzoň O, Soukal P, Eme L, Dacks JB, Karnkowska A, Eliáš M, Hampl V. Genomics of Preaxostyla Flagellates Illuminates the Path Towards the Loss of Mitochondria. Plos Genetics. 19: e1011050. PMID 38060519 DOI: 10.1371/journal.pgen.1011050 |
0.7 |
|
| 2023 |
Záhonová K, Füssy Z, Stairs CW, Leger MM, Tachezy J, Čepička I, Roger AJ, Hampl V. Comparative analysis of mitochondrion-related organelles in anaerobic amoebozoans. Microbial Genomics. 9. PMID 37994879 DOI: 10.1099/mgen.0.001143 |
0.777 |
|
| 2023 |
Karnkowska A, Yubuki N, Maruyama M, Yamaguchi A, Kashiyama Y, Suzaki T, Keeling PJ, Hampl V, Leander BS. Euglenozoan kleptoplasty illuminates the early evolution of photoendosymbiosis. Proceedings of the National Academy of Sciences of the United States of America. 120: e2220100120. PMID 36927158 DOI: 10.1073/pnas.2220100120 |
0.334 |
|
| 2022 |
Zítek J, Füssy Z, Treitli SC, Peña-Diaz P, Vaitová Z, Zavadska D, Harant K, Hampl V. Reduced mitochondria provide an essential function for the cytosolic methionine cycle. Current Biology : Cb. 32: 5057-5068.e5. PMID 36347252 DOI: 10.1016/j.cub.2022.10.028 |
0.347 |
|
| 2022 |
Záhonová K, Treitli SC, Le T, Škodová-Sveráková I, Hanousková P, Čepička I, Tachezy J, Hampl V. Anaerobic derivates of mitochondria and peroxisomes in the free-living amoeba Pelomyxa schiedti revealed by single-cell genomics. Bmc Biology. 20: 56. PMID 35227266 DOI: 10.1186/s12915-022-01247-w |
0.375 |
|
| 2021 |
Soukal P, Hrdá Š, Karnkowska A, Milanowski R, Szabová J, Hradilová M, Strnad H, Vlček Č, Čepička I, Hampl V. Heterotrophic euglenid Rhabdomonas costata resembles its phototrophic relatives in many aspects of molecular and cell biology. Scientific Reports. 11: 13070. PMID 34158556 DOI: 10.1038/s41598-021-92174-3 |
0.378 |
|
| 2021 |
Füssy Z, Vinopalová M, Treitli SC, Pánek T, Smejkalová P, Čepička I, Doležal P, Hampl V. Retortamonads from vertebrate hosts share features of anaerobic metabolism and pre-adaptations to parasitism with diplomonads. Parasitology International. 82: 102308. PMID 33626397 DOI: 10.1016/j.parint.2021.102308 |
0.358 |
|
| 2020 |
Faktorová D, Nisbet RER, Fernández Robledo JA, Casacuberta E, Sudek L, Allen AE, Ares M, Aresté C, Balestreri C, Barbrook AC, Beardslee P, Bender S, Booth DS, Bouget FY, Bowler C, ... ... Hampl V, et al. Publisher Correction: Genetic tool development in marine protists: emerging model organisms for experimental cell biology. Nature Methods. PMID 32296171 DOI: 10.1038/S41592-020-0828-6 |
0.728 |
|
| 2020 |
Faktorová D, Nisbet RER, Fernández Robledo JA, Casacuberta E, Sudek L, Allen AE, Ares M, Aresté C, Balestreri C, Barbrook AC, Beardslee P, Bender S, Booth DS, Bouget FY, Bowler C, ... ... Hampl V, et al. Genetic tool development in marine protists: emerging model organisms for experimental cell biology. Nature Methods. PMID 32251396 DOI: 10.1038/S41592-020-0796-X |
0.759 |
|
| 2020 |
Harada R, Hirakawa Y, Yabuki A, Kashiyama Y, Maruyama M, Onuma R, Soukal P, Miyagishima S, Hampl V, Tanifuji G, Inagaki Y. Inventory and Evolution of Mitochondrion-localized Family A DNA Polymerases in Euglenozoa. Pathogens (Basel, Switzerland). 9. PMID 32244644 DOI: 10.3390/Pathogens9040257 |
0.508 |
|
| 2020 |
Butenko A, Opperdoes FR, Flegontova O, Horák A, Hampl V, Keeling P, Gawryluk RMR, Tikhonenkov D, Flegontov P, Lukeš J. Evolution of metabolic capabilities and molecular features of diplonemids, kinetoplastids, and euglenids. Bmc Biology. 18: 23. PMID 32122335 DOI: 10.1186/S12915-020-0754-1 |
0.436 |
|
| 2019 |
Lukešová S, Karlicki M, Tomečková Hadariová L, Szabová J, Karnkowska A, Hampl V. Analyses of environmental sequences and two regions of chloroplast genomes revealed the presence of new clades of photosynthetic euglenids in marine environments. Environmental Microbiology Reports. PMID 31845515 DOI: 10.1111/1758-2229.12817 |
0.429 |
|
| 2019 |
Novák Vanclová AMG, Zoltner M, Kelly S, Soukal P, Záhonová K, Füssy Z, Ebenezer TE, Lacová Dobáková E, Eliáš M, Lukeš J, Field MC, Hampl V. Metabolic quirks and the colourful history of the Euglena gracilis secondary plastid. The New Phytologist. PMID 31580486 DOI: 10.1111/Nph.16237 |
0.447 |
|
| 2019 |
Treitli SC, Kolisko M, Husník F, Keeling PJ, Hampl V. Revealing the metabolic capacity of and its bacterial symbionts using single-cell metagenomics. Proceedings of the National Academy of Sciences of the United States of America. PMID 31492817 DOI: 10.1073/Pnas.1910793116 |
0.691 |
|
| 2019 |
Karnkowska A, Treitli SC, Brzoň O, Novák L, Vacek V, Soukal P, Barlow LD, Herman EK, Pipaliya SV, Pánek T, Žihala D, Petrželková R, Butenko A, Eme L, Stairs CW, ... ... Hampl V, et al. The oxymonad genome displays canonical eukaryotic complexity in the absence of a mitochondrion. Molecular Biology and Evolution. PMID 31387118 DOI: 10.1093/Molbev/Msz147 |
0.774 |
|
| 2019 |
Ebenezer TE, Zoltner M, Burrell A, Nenarokova A, Novák Vanclová AMG, Prasad B, Soukal P, Santana-Molina C, O'Neill E, Nankissoor NN, Vadakedath N, Daiker V, Obado S, Silva-Pereira S, Jackson AP, ... ... Hampl V, et al. Transcriptome, proteome and draft genome of Euglena gracilis. Bmc Biology. 17: 11. PMID 30732613 DOI: 10.1186/S12915-019-0626-8 |
0.374 |
|
| 2018 |
Hampl V, Čepička I, Eliáš M. Was the Mitochondrion Necessary to Start Eukaryogenesis? Trends in Microbiology. PMID 30466901 DOI: 10.1016/J.Tim.2018.10.005 |
0.405 |
|
| 2018 |
Adl SM, Bass D, Lane CE, Lukeš J, Schoch CL, Smirnov A, Agatha S, Berney C, Brown MW, Burki F, Cárdenas P, Čepička I, Chistyakova L, Del Campo J, Dunthorn M, ... ... Hampl V, et al. Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes. The Journal of Eukaryotic Microbiology. PMID 30257078 DOI: 10.1111/Jeu.12691 |
0.723 |
|
| 2018 |
Vacek V, Novák LVF, Treitli SC, Táborský P, Cepicka I, Kolísko M, Keeling PJ, Hampl V. Fe-S Cluster Assembly in Oxymonads and Related Protists. Molecular Biology and Evolution. PMID 30184127 DOI: 10.1093/Molbev/Msy168 |
0.718 |
|
| 2018 |
Treitli SC, Kotyk M, Yubuki N, Jirounková E, Vlasáková J, Smejkalová P, Šípek P, Čepička I, Hampl V. Molecular and Morphological Diversity of the Oxymonad Genera Monocercomonoides and Blattamonas gen. nov. Protist. 169: 744-783. PMID 30138782 DOI: 10.1016/J.Protis.2018.06.005 |
0.417 |
|
| 2018 |
Záhonová K, Petrželková R, Valach M, Yazaki E, Tikhonenkov DV, Butenko A, Janouškovec J, Hrdá Š, Klimeš V, Burger G, Inagaki Y, Keeling PJ, Hampl V, Flegontov P, Yurchenko V, et al. Extensive molecular tinkering in the evolution of the membrane attachment mode of the Rheb GTPase. Scientific Reports. 8: 5239. PMID 29588502 DOI: 10.1038/S41598-018-23575-0 |
0.559 |
|
| 2017 |
Hadariová L, Vesteg M, Hampl V, Krajčovič J. Reductive evolution of chloroplasts in non-photosynthetic plants, algae and protists. Current Genetics. PMID 29026976 DOI: 10.1007/S00294-017-0761-0 |
0.399 |
|
| 2017 |
Vanclová AMG, Hadariová L, Hrdá Š, Hampl V. Secondary Plastids of Euglenophytes Advances in Botanical Research. 84: 321-358. DOI: 10.1016/Bs.Abr.2017.06.008 |
0.448 |
|
| 2016 |
Karnkowska A, Hampl V. The curious case of vanishing mitochondria. Microbial Cell (Graz, Austria). 3: 491-494. PMID 28357316 DOI: 10.15698/Mic2016.10.531 |
0.479 |
|
| 2016 |
Novák L, Zubáčová Z, Karnkowska A, Kolisko M, Hroudová M, Stairs CW, Simpson AG, Keeling PJ, Roger AJ, Čepička I, Hampl V. Arginine deiminase pathway enzymes: evolutionary history in metamonads and other eukaryotes. Bmc Evolutionary Biology. 16: 197. PMID 27716026 DOI: 10.1186/S12862-016-0771-4 |
0.753 |
|
| 2016 |
Hrdá Š, Hroudová M, Vlček Č, Hampl V. Mitochondrial Genome of Prasinophyte Alga Pyramimonas parkeae. The Journal of Eukaryotic Microbiology. PMID 27678215 DOI: 10.1111/Jeu.12371 |
0.477 |
|
| 2016 |
Karnkowska A, Vacek V, Zubáčová Z, Treitli SC, Petrželková R, Eme L, Novák L, Žárský V, Barlow LD, Herman EK, Soukal P, Hroudová M, Doležal P, Stairs CW, Roger AJ, ... ... Hampl V, et al. A Eukaryote without a Mitochondrial Organelle. Current Biology : Cb. PMID 27185558 DOI: 10.1016/J.Cub.2016.03.053 |
0.793 |
|
| 2016 |
Zíková A, Hampl V, Paris Z, Týč J, Lukeš J. Aerobic mitochondria of parasitic protists: Diverse genomes and complex functions. Molecular and Biochemical Parasitology. PMID 26906976 DOI: 10.1016/J.Molbiopara.2016.02.007 |
0.444 |
|
| 2015 |
Rada P, Makki AR, Zimorski V, Garg S, Hampl V, Hrdý I, Gould SB, Tachezy J. N-terminal presequence-independent import of phosphofructokinase into hydrogenosomes of Trichomonas vaginalis. Eukaryotic Cell. PMID 26475173 DOI: 10.1128/Ec.00104-15 |
0.389 |
|
| 2014 |
Pánek T, Simpson AG, Hampl V, Cepi?ka I. Creneis carolina gen. et sp. nov. (Heterolobosea), a novel marine anaerobic protist with strikingly derived morphology and life cycle. Protist. 165: 542-67. PMID 24999602 DOI: 10.1016/J.Protis.2014.05.005 |
0.622 |
|
| 2014 |
Szabová J, Yubuki N, Leander BS, Triemer RE, Hampl V. The evolution of paralogous enzymes MAT and MATX within the Euglenida and beyond. Bmc Evolutionary Biology. 14: 25. PMID 24517416 DOI: 10.1186/1471-2148-14-25 |
0.398 |
|
| 2013 |
Zubáčová Z, Novák L, Bublíková J, Vacek V, Fousek J, Rídl J, Tachezy J, Doležal P, Vlček C, Hampl V. The mitochondrion-like organelle of Trimastix pyriformis contains the complete glycine cleavage system. Plos One. 8: e55417. PMID 23516392 DOI: 10.1371/Journal.Pone.0055417 |
0.752 |
|
| 2013 |
Adl SM, Simpson AGB, Lane CE, Lukeš J, Bass D, Bowser SS, Brown MW, Burki F, Dunthorn M, Hampl V, Heiss A, Hoppenrath M, Lara E, Gall LL, Lynn DH, et al. Erratum: The revised classification of eukaryotes (Journal of Eukaryotic Microbiology (2012) 59 (429-514) DOI:10.1111/j.1550-7408.2012.00644.x) Journal of Eukaryotic Microbiology. 60. DOI: 10.1111/Jeu.12033 |
0.476 |
|
| 2012 |
Krnáčová K, Vesteg M, Hampl V, Vlček Č, Horváth A. Euglena gracilis and Trypanosomatids possess common patterns in predicted mitochondrial targeting presequences. Journal of Molecular Evolution. 75: 119-29. PMID 23064754 DOI: 10.1007/S00239-012-9523-2 |
0.4 |
|
| 2012 |
Adl SM, Simpson AG, Lane CE, Lukeš J, Bass D, Bowser SS, Brown MW, Burki F, Dunthorn M, Hampl V, Heiss A, Hoppenrath M, Lara E, Le Gall L, Lynn DH, et al. The revised classification of eukaryotes. The Journal of Eukaryotic Microbiology. 59: 429-93. PMID 23020233 DOI: 10.1111/J.1550-7408.2012.00644.X |
0.695 |
|
| 2012 |
Hrdá Š, Fousek J, Szabová J, Hampl V, Hampl V, Vlček Č. The plastid genome of Eutreptiella provides a window into the process of secondary endosymbiosis of plastid in euglenids. Plos One. 7: e33746. PMID 22448269 DOI: 10.1371/Journal.Pone.0033746 |
0.425 |
|
| 2011 |
Hampl V, Stairs CW, Roger AJ. The tangled past of eukaryotic enzymes involved in anaerobic metabolism. Mobile Genetic Elements. 1: 71-74. PMID 22016847 DOI: 10.4161/Mge.1.1.15588 |
0.778 |
|
| 2011 |
Szabová J, Ruzicka P, Verner Z, Hampl V, Lukes J. Experimental examination of EFL and MATX eukaryotic horizontal gene transfers: coexistence of mutually exclusive transcripts predates functional rescue. Molecular Biology and Evolution. 28: 2371-8. PMID 21385829 DOI: 10.1093/Molbev/Msr060 |
0.335 |
|
| 2011 |
Stairs CW, Roger AJ, Hampl V. Eukaryotic pyruvate formate lyase and its activating enzyme were acquired laterally from a Firmicute. Molecular Biology and Evolution. 28: 2087-99. PMID 21293046 DOI: 10.1093/Molbev/Msr032 |
0.795 |
|
| 2011 |
Morada M, Smid O, Hampl V, Sutak R, Lam B, Rappelli P, Dessì D, Fiori PL, Tachezy J, Yarlett N. Hydrogenosome-localization of arginine deiminase in Trichomonas vaginalis. Molecular and Biochemical Parasitology. 176: 51-4. PMID 21074581 DOI: 10.1016/J.Molbiopara.2010.10.004 |
0.397 |
|
| 2010 |
Cepicka I, Hampl V, Kulda J. Critical taxonomic revision of Parabasalids with description of one new genus and three new species. Protist. 161: 400-33. PMID 20093080 DOI: 10.1016/J.Protis.2009.11.005 |
0.322 |
|
| 2009 |
Hampl V, Hug L, Leigh JW, Dacks JB, Lang BF, Simpson AG, Roger AJ. Phylogenomic analyses support the monophyly of Excavata and resolve relationships among eukaryotic "supergroups". Proceedings of the National Academy of Sciences of the United States of America. 106: 3859-64. PMID 19237557 DOI: 10.1073/Pnas.0807880106 |
0.785 |
|
| 2008 |
Sanchez-Perez GF, Hampl V, Simpson AG, Roger AJ. A new divergent type of eukaryotic methionine adenosyltransferase is present in multiple distantly related secondary algal lineages. The Journal of Eukaryotic Microbiology. 55: 374-81. PMID 19017057 DOI: 10.1111/J.1550-7408.2008.00349.X |
0.8 |
|
| 2008 |
Kolisko M, Cepicka I, Hampl V, Leigh J, Roger AJ, Kulda J, Simpson AG, Flegr J. Molecular phylogeny of diplomonads and enteromonads based on SSU rRNA, alpha-tubulin and HSP90 genes: implications for the evolutionary history of the double karyomastigont of diplomonads. Bmc Evolutionary Biology. 8: 205. PMID 18627633 DOI: 10.1186/1471-2148-8-205 |
0.78 |
|
| 2008 |
Hampl V, Silberman JD, Stechmann A, Diaz-Triviño S, Johnson PJ, Roger AJ. Genetic evidence for a mitochondriate ancestry in the 'amitochondriate' flagellate Trimastix pyriformis. Plos One. 3: e1383. PMID 18167542 DOI: 10.1371/Journal.Pone.0001383 |
0.782 |
|
| 2007 |
Hampl V, Cepicka I, Flegr J, Tachezy J, Kulda J. Morphological and molecular diversity of the monocercomonadid genera Monocercomonas, Hexamastix, and Honigbergiella gen. nov. Protist. 158: 365-83. PMID 17499022 DOI: 10.1016/J.Protis.2007.02.003 |
0.338 |
|
| 2007 |
Kostka M, Cepicka I, Hampl V, Flegr J. Phylogenetic position of Karotomorpha and paraphyly of Proteromonadidae. Molecular Phylogenetics and Evolution. 43: 1167-70. PMID 17187998 DOI: 10.1016/J.Ympev.2006.11.002 |
0.345 |
|
| 2006 |
Liapounova NA, Hampl V, Gordon PM, Sensen CW, Gedamu L, Dacks JB. Reconstructing the mosaic glycolytic pathway of the anaerobic eukaryote Monocercomonoides. Eukaryotic Cell. 5: 2138-46. PMID 17071828 DOI: 10.1128/Ec.00258-06 |
0.438 |
|
| 2006 |
Kolárová L, Rudolfová J, Hampl V, Skírnisson K. Allobilharzia visceralis gen. nov., sp. nov. (Schistosomatidae-Trematoda) from Cygnus cygnus (L.) (Anatidae). Parasitology International. 55: 179-86. PMID 16627001 DOI: 10.1016/J.Parint.2005.10.009 |
0.339 |
|
| 2006 |
Cepicka I, Hampl V, Kulda J, Flegr J. New evolutionary lineages, unexpected diversity, and host specificity in the parabasalid genus Tetratrichomonas. Molecular Phylogenetics and Evolution. 39: 542-51. PMID 16473027 DOI: 10.1016/J.Ympev.2006.01.005 |
0.395 |
|
| 2006 |
Hampl V, Vrlík M, Cepicka I, Pecka Z, Kulda J, Tachezy J. Affiliation of Cochlosoma to trichomonads confirmed by phylogenetic analysis of the small-subunit rRNA gene and a new family concept of the order Trichomonadida. International Journal of Systematic and Evolutionary Microbiology. 56: 305-12. PMID 16403903 DOI: 10.1099/Ijs.0.63754-0 |
0.393 |
|
| 2005 |
Hampl V, Horner DS, Dyal P, Kulda J, Flegr J, Foster PG, Embley TM. Inference of the phylogenetic position of oxymonads based on nine genes: support for metamonada and excavata. Molecular Biology and Evolution. 22: 2508-18. PMID 16120804 DOI: 10.1093/Molbev/Msi245 |
0.42 |
|
| 2005 |
Kolisko M, Cepicka I, Hampl V, Kulda J, Flegr J. The phylogenetic position of enteromonads: a challenge for the present models of diplomonad evolution. International Journal of Systematic and Evolutionary Microbiology. 55: 1729-33. PMID 16014510 DOI: 10.1099/Ijs.0.63542-0 |
0.712 |
|
| 2004 |
Kostka M, Hampl V, Cepicka I, Flegr J. Phylogenetic position of Protoopalina intestinalis based on SSU rRNA gene sequence. Molecular Phylogenetics and Evolution. 33: 220-4. PMID 15324850 DOI: 10.1016/J.Ympev.2004.05.009 |
0.446 |
|
| 2004 |
Hampl V, Cepicka I, Flegr J, Tachezy J, Kulda J. Critical analysis of the topology and rooting of the parabasalian 16S rRNA tree. Molecular Phylogenetics and Evolution. 32: 711-23. PMID 15288049 DOI: 10.1016/J.Ympev.2004.03.005 |
0.375 |
|
| 2002 |
Tachezy J, Tachezy R, Hampl V, Sedinová M, Vanacová S, Vrlík M, Van Ranst M, Flegr J, Kuldaa J. Cattle pathogen tritrichomonas foetus (Riedmüller, 1928) and pig commensal Tritrichomonas suis (Gruby & Delafond, 1843) belong to the same species. The Journal of Eukaryotic Microbiology. 49: 154-63. PMID 12046599 DOI: 10.1111/J.1550-7408.2002.Tb00360.X |
0.309 |
|
| 2002 |
Silberman JD, Simpson AG, Kulda J, Cepicka I, Hampl V, Johnson PJ, Roger AJ. Retortamonad flagellates are closely related to diplomonads--implications for the history of mitochondrial function in eukaryote evolution. Molecular Biology and Evolution. 19: 777-86. PMID 11961110 DOI: 10.1093/Oxfordjournals.Molbev.A004135 |
0.811 |
|
| 2002 |
Dvorák J, Vanácová S, Hampl V, Flegr J, Horák P. Comparison of european Trichobilharzia species based on ITS1 and ITS2 sequences. Parasitology. 124: 307-13. PMID 11922432 DOI: 10.1017/S0031182001001238 |
0.317 |
|
| 2001 |
Hampl V, Pavlícek A, Flegr J. Construction and bootstrap analysis of DNA fingerprinting-based phylogenetic trees with the freeware program FreeTree: application to trichomonad parasites. International Journal of Systematic and Evolutionary Microbiology. 51: 731-5. PMID 11411692 DOI: 10.1099/00207713-51-3-731 |
0.316 |
|
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