Vladimir Hampl - Publications

Affiliations: 
Charles University, Prague, Czechia 

60 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Del Campo J, Carlos-Oliveira M, Čepička I, Hehenberger E, Horák A, Karnkowska A, Kolisko M, Lara E, Lukeš J, Pánek T, Piwosz K, Richter DJ, Škaloud P, Sutak R, Tachezy J, ... Hampl V, et al. The protist cultural renaissance. Trends in Microbiology. PMID 38102035 DOI: 10.1016/j.tim.2023.11.010  0.569
2023 Novák LVF, Treitli SC, Pyrih J, Hałakuc P, Pipaliya SV, Vacek V, Brzoň O, Soukal P, Eme L, Dacks JB, Karnkowska A, Eliáš M, Hampl V. Genomics of Preaxostyla Flagellates Illuminates the Path Towards the Loss of Mitochondria. Plos Genetics. 19: e1011050. PMID 38060519 DOI: 10.1371/journal.pgen.1011050  0.709
2023 Záhonová K, Füssy Z, Stairs CW, Leger MM, Tachezy J, Čepička I, Roger AJ, Hampl V. Comparative analysis of mitochondrion-related organelles in anaerobic amoebozoans. Microbial Genomics. 9. PMID 37994879 DOI: 10.1099/mgen.0.001143  0.774
2023 Karnkowska A, Yubuki N, Maruyama M, Yamaguchi A, Kashiyama Y, Suzaki T, Keeling PJ, Hampl V, Leander BS. Euglenozoan kleptoplasty illuminates the early evolution of photoendosymbiosis. Proceedings of the National Academy of Sciences of the United States of America. 120: e2220100120. PMID 36927158 DOI: 10.1073/pnas.2220100120  0.324
2022 Zítek J, Füssy Z, Treitli SC, Peña-Diaz P, Vaitová Z, Zavadska D, Harant K, Hampl V. Reduced mitochondria provide an essential function for the cytosolic methionine cycle. Current Biology : Cb. 32: 5057-5068.e5. PMID 36347252 DOI: 10.1016/j.cub.2022.10.028  0.359
2022 Záhonová K, Treitli SC, Le T, Škodová-Sveráková I, Hanousková P, Čepička I, Tachezy J, Hampl V. Anaerobic derivates of mitochondria and peroxisomes in the free-living amoeba Pelomyxa schiedti revealed by single-cell genomics. Bmc Biology. 20: 56. PMID 35227266 DOI: 10.1186/s12915-022-01247-w  0.384
2021 Soukal P, Hrdá Š, Karnkowska A, Milanowski R, Szabová J, Hradilová M, Strnad H, Vlček Č, Čepička I, Hampl V. Heterotrophic euglenid Rhabdomonas costata resembles its phototrophic relatives in many aspects of molecular and cell biology. Scientific Reports. 11: 13070. PMID 34158556 DOI: 10.1038/s41598-021-92174-3  0.376
2021 Füssy Z, Vinopalová M, Treitli SC, Pánek T, Smejkalová P, Čepička I, Doležal P, Hampl V. Retortamonads from vertebrate hosts share features of anaerobic metabolism and pre-adaptations to parasitism with diplomonads. Parasitology International. 82: 102308. PMID 33626397 DOI: 10.1016/j.parint.2021.102308  0.375
2020 Faktorová D, Nisbet RER, Fernández Robledo JA, Casacuberta E, Sudek L, Allen AE, Ares M, Aresté C, Balestreri C, Barbrook AC, Beardslee P, Bender S, Booth DS, Bouget FY, Bowler C, ... ... Hampl V, et al. Publisher Correction: Genetic tool development in marine protists: emerging model organisms for experimental cell biology. Nature Methods. PMID 32296171 DOI: 10.1038/S41592-020-0828-6  0.732
2020 Faktorová D, Nisbet RER, Fernández Robledo JA, Casacuberta E, Sudek L, Allen AE, Ares M, Aresté C, Balestreri C, Barbrook AC, Beardslee P, Bender S, Booth DS, Bouget FY, Bowler C, ... ... Hampl V, et al. Genetic tool development in marine protists: emerging model organisms for experimental cell biology. Nature Methods. PMID 32251396 DOI: 10.1038/S41592-020-0796-X  0.762
2020 Harada R, Hirakawa Y, Yabuki A, Kashiyama Y, Maruyama M, Onuma R, Soukal P, Miyagishima S, Hampl V, Tanifuji G, Inagaki Y. Inventory and Evolution of Mitochondrion-localized Family A DNA Polymerases in Euglenozoa. Pathogens (Basel, Switzerland). 9. PMID 32244644 DOI: 10.3390/Pathogens9040257  0.51
2020 Butenko A, Opperdoes FR, Flegontova O, Horák A, Hampl V, Keeling P, Gawryluk RMR, Tikhonenkov D, Flegontov P, Lukeš J. Evolution of metabolic capabilities and molecular features of diplonemids, kinetoplastids, and euglenids. Bmc Biology. 18: 23. PMID 32122335 DOI: 10.1186/S12915-020-0754-1  0.439
2019 Lukešová S, Karlicki M, Tomečková Hadariová L, Szabová J, Karnkowska A, Hampl V. Analyses of environmental sequences and two regions of chloroplast genomes revealed the presence of new clades of photosynthetic euglenids in marine environments. Environmental Microbiology Reports. PMID 31845515 DOI: 10.1111/1758-2229.12817  0.425
2019 Novák Vanclová AMG, Zoltner M, Kelly S, Soukal P, Záhonová K, Füssy Z, Ebenezer TE, Lacová Dobáková E, Eliáš M, Lukeš J, Field MC, Hampl V. Metabolic quirks and the colourful history of the Euglena gracilis secondary plastid. The New Phytologist. PMID 31580486 DOI: 10.1111/Nph.16237  0.45
2019 Treitli SC, Kolisko M, Husník F, Keeling PJ, Hampl V. Revealing the metabolic capacity of and its bacterial symbionts using single-cell metagenomics. Proceedings of the National Academy of Sciences of the United States of America. PMID 31492817 DOI: 10.1073/Pnas.1910793116  0.689
2019 Karnkowska A, Treitli SC, Brzoň O, Novák L, Vacek V, Soukal P, Barlow LD, Herman EK, Pipaliya SV, Pánek T, Žihala D, Petrželková R, Butenko A, Eme L, Stairs CW, ... ... Hampl V, et al. The oxymonad genome displays canonical eukaryotic complexity in the absence of a mitochondrion. Molecular Biology and Evolution. PMID 31387118 DOI: 10.1093/Molbev/Msz147  0.766
2019 Ebenezer TE, Zoltner M, Burrell A, Nenarokova A, Novák Vanclová AMG, Prasad B, Soukal P, Santana-Molina C, O'Neill E, Nankissoor NN, Vadakedath N, Daiker V, Obado S, Silva-Pereira S, Jackson AP, ... ... Hampl V, et al. Transcriptome, proteome and draft genome of Euglena gracilis. Bmc Biology. 17: 11. PMID 30732613 DOI: 10.1186/S12915-019-0626-8  0.362
2018 Hampl V, Čepička I, Eliáš M. Was the Mitochondrion Necessary to Start Eukaryogenesis? Trends in Microbiology. PMID 30466901 DOI: 10.1016/J.Tim.2018.10.005  0.395
2018 Adl SM, Bass D, Lane CE, Lukeš J, Schoch CL, Smirnov A, Agatha S, Berney C, Brown MW, Burki F, Cárdenas P, Čepička I, Chistyakova L, Del Campo J, Dunthorn M, ... ... Hampl V, et al. Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes. The Journal of Eukaryotic Microbiology. PMID 30257078 DOI: 10.1111/Jeu.12691  0.726
2018 Vacek V, Novák LVF, Treitli SC, Táborský P, Cepicka I, Kolísko M, Keeling PJ, Hampl V. Fe-S Cluster Assembly in Oxymonads and Related Protists. Molecular Biology and Evolution. PMID 30184127 DOI: 10.1093/Molbev/Msy168  0.725
2018 Treitli SC, Kotyk M, Yubuki N, Jirounková E, Vlasáková J, Smejkalová P, Šípek P, Čepička I, Hampl V. Molecular and Morphological Diversity of the Oxymonad Genera Monocercomonoides and Blattamonas gen. nov. Protist. 169: 744-783. PMID 30138782 DOI: 10.1016/J.Protis.2018.06.005  0.418
2018 Záhonová K, Petrželková R, Valach M, Yazaki E, Tikhonenkov DV, Butenko A, Janouškovec J, Hrdá Š, Klimeš V, Burger G, Inagaki Y, Keeling PJ, Hampl V, Flegontov P, Yurchenko V, et al. Extensive molecular tinkering in the evolution of the membrane attachment mode of the Rheb GTPase. Scientific Reports. 8: 5239. PMID 29588502 DOI: 10.1038/S41598-018-23575-0  0.561
2017 Hadariová L, Vesteg M, Hampl V, Krajčovič J. Reductive evolution of chloroplasts in non-photosynthetic plants, algae and protists. Current Genetics. PMID 29026976 DOI: 10.1007/S00294-017-0761-0  0.389
2017 Vanclová AMG, Hadariová L, Hrdá Š, Hampl V. Secondary Plastids of Euglenophytes Advances in Botanical Research. 84: 321-358. DOI: 10.1016/Bs.Abr.2017.06.008  0.442
2016 Karnkowska A, Hampl V. The curious case of vanishing mitochondria. Microbial Cell (Graz, Austria). 3: 491-494. PMID 28357316 DOI: 10.15698/Mic2016.10.531  0.489
2016 Novák L, Zubáčová Z, Karnkowska A, Kolisko M, Hroudová M, Stairs CW, Simpson AG, Keeling PJ, Roger AJ, Čepička I, Hampl V. Arginine deiminase pathway enzymes: evolutionary history in metamonads and other eukaryotes. Bmc Evolutionary Biology. 16: 197. PMID 27716026 DOI: 10.1186/S12862-016-0771-4  0.744
2016 Hrdá Š, Hroudová M, Vlček Č, Hampl V. Mitochondrial Genome of Prasinophyte Alga Pyramimonas parkeae. The Journal of Eukaryotic Microbiology. PMID 27678215 DOI: 10.1111/Jeu.12371  0.473
2016 Karnkowska A, Vacek V, Zubáčová Z, Treitli SC, Petrželková R, Eme L, Novák L, Žárský V, Barlow LD, Herman EK, Soukal P, Hroudová M, Doležal P, Stairs CW, Roger AJ, ... ... Hampl V, et al. A Eukaryote without a Mitochondrial Organelle. Current Biology : Cb. PMID 27185558 DOI: 10.1016/J.Cub.2016.03.053  0.785
2016 Zíková A, Hampl V, Paris Z, Týč J, Lukeš J. Aerobic mitochondria of parasitic protists: Diverse genomes and complex functions. Molecular and Biochemical Parasitology. PMID 26906976 DOI: 10.1016/J.Molbiopara.2016.02.007  0.448
2015 Rada P, Makki AR, Zimorski V, Garg S, Hampl V, Hrdý I, Gould SB, Tachezy J. N-terminal presequence-independent import of phosphofructokinase into hydrogenosomes of Trichomonas vaginalis. Eukaryotic Cell. PMID 26475173 DOI: 10.1128/Ec.00104-15  0.398
2014 Pánek T, Simpson AG, Hampl V, Cepi?ka I. Creneis carolina gen. et sp. nov. (Heterolobosea), a novel marine anaerobic protist with strikingly derived morphology and life cycle. Protist. 165: 542-67. PMID 24999602 DOI: 10.1016/J.Protis.2014.05.005  0.621
2014 Szabová J, Yubuki N, Leander BS, Triemer RE, Hampl V. The evolution of paralogous enzymes MAT and MATX within the Euglenida and beyond. Bmc Evolutionary Biology. 14: 25. PMID 24517416 DOI: 10.1186/1471-2148-14-25  0.391
2013 Zubáčová Z, Novák L, Bublíková J, Vacek V, Fousek J, Rídl J, Tachezy J, Doležal P, Vlček C, Hampl V. The mitochondrion-like organelle of Trimastix pyriformis contains the complete glycine cleavage system. Plos One. 8: e55417. PMID 23516392 DOI: 10.1371/Journal.Pone.0055417  0.773
2013 Adl SM, Simpson AGB, Lane CE, Lukeš J, Bass D, Bowser SS, Brown MW, Burki F, Dunthorn M, Hampl V, Heiss A, Hoppenrath M, Lara E, Gall LL, Lynn DH, et al. Erratum: The revised classification of eukaryotes (Journal of Eukaryotic Microbiology (2012) 59 (429-514) DOI:10.1111/j.1550-7408.2012.00644.x) Journal of Eukaryotic Microbiology. 60. DOI: 10.1111/Jeu.12033  0.485
2012 Krnáčová K, Vesteg M, Hampl V, Vlček Č, Horváth A. Euglena gracilis and Trypanosomatids possess common patterns in predicted mitochondrial targeting presequences. Journal of Molecular Evolution. 75: 119-29. PMID 23064754 DOI: 10.1007/S00239-012-9523-2  0.414
2012 Adl SM, Simpson AG, Lane CE, Lukeš J, Bass D, Bowser SS, Brown MW, Burki F, Dunthorn M, Hampl V, Heiss A, Hoppenrath M, Lara E, Le Gall L, Lynn DH, et al. The revised classification of eukaryotes. The Journal of Eukaryotic Microbiology. 59: 429-93. PMID 23020233 DOI: 10.1111/J.1550-7408.2012.00644.X  0.694
2012 Hrdá Š, Fousek J, Szabová J, Hampl V, Hampl V, Vlček Č. The plastid genome of Eutreptiella provides a window into the process of secondary endosymbiosis of plastid in euglenids. Plos One. 7: e33746. PMID 22448269 DOI: 10.1371/Journal.Pone.0033746  0.399
2011 Hampl V, Stairs CW, Roger AJ. The tangled past of eukaryotic enzymes involved in anaerobic metabolism. Mobile Genetic Elements. 1: 71-74. PMID 22016847 DOI: 10.4161/Mge.1.1.15588  0.78
2011 Szabová J, Ruzicka P, Verner Z, Hampl V, Lukes J. Experimental examination of EFL and MATX eukaryotic horizontal gene transfers: coexistence of mutually exclusive transcripts predates functional rescue. Molecular Biology and Evolution. 28: 2371-8. PMID 21385829 DOI: 10.1093/Molbev/Msr060  0.328
2011 Stairs CW, Roger AJ, Hampl V. Eukaryotic pyruvate formate lyase and its activating enzyme were acquired laterally from a Firmicute. Molecular Biology and Evolution. 28: 2087-99. PMID 21293046 DOI: 10.1093/Molbev/Msr032  0.799
2011 Morada M, Smid O, Hampl V, Sutak R, Lam B, Rappelli P, Dessì D, Fiori PL, Tachezy J, Yarlett N. Hydrogenosome-localization of arginine deiminase in Trichomonas vaginalis. Molecular and Biochemical Parasitology. 176: 51-4. PMID 21074581 DOI: 10.1016/J.Molbiopara.2010.10.004  0.407
2010 Cepicka I, Hampl V, Kulda J. Critical taxonomic revision of Parabasalids with description of one new genus and three new species. Protist. 161: 400-33. PMID 20093080 DOI: 10.1016/J.Protis.2009.11.005  0.325
2009 Hampl V, Hug L, Leigh JW, Dacks JB, Lang BF, Simpson AG, Roger AJ. Phylogenomic analyses support the monophyly of Excavata and resolve relationships among eukaryotic "supergroups". Proceedings of the National Academy of Sciences of the United States of America. 106: 3859-64. PMID 19237557 DOI: 10.1073/Pnas.0807880106  0.782
2008 Sanchez-Perez GF, Hampl V, Simpson AG, Roger AJ. A new divergent type of eukaryotic methionine adenosyltransferase is present in multiple distantly related secondary algal lineages. The Journal of Eukaryotic Microbiology. 55: 374-81. PMID 19017057 DOI: 10.1111/J.1550-7408.2008.00349.X  0.797
2008 Kolisko M, Cepicka I, Hampl V, Leigh J, Roger AJ, Kulda J, Simpson AG, Flegr J. Molecular phylogeny of diplomonads and enteromonads based on SSU rRNA, alpha-tubulin and HSP90 genes: implications for the evolutionary history of the double karyomastigont of diplomonads. Bmc Evolutionary Biology. 8: 205. PMID 18627633 DOI: 10.1186/1471-2148-8-205  0.773
2008 Hampl V, Silberman JD, Stechmann A, Diaz-Triviño S, Johnson PJ, Roger AJ. Genetic evidence for a mitochondriate ancestry in the 'amitochondriate' flagellate Trimastix pyriformis. Plos One. 3: e1383. PMID 18167542 DOI: 10.1371/Journal.Pone.0001383  0.782
2007 Hampl V, Cepicka I, Flegr J, Tachezy J, Kulda J. Morphological and molecular diversity of the monocercomonadid genera Monocercomonas, Hexamastix, and Honigbergiella gen. nov. Protist. 158: 365-83. PMID 17499022 DOI: 10.1016/J.Protis.2007.02.003  0.344
2007 Kostka M, Cepicka I, Hampl V, Flegr J. Phylogenetic position of Karotomorpha and paraphyly of Proteromonadidae. Molecular Phylogenetics and Evolution. 43: 1167-70. PMID 17187998 DOI: 10.1016/J.Ympev.2006.11.002  0.345
2006 Liapounova NA, Hampl V, Gordon PM, Sensen CW, Gedamu L, Dacks JB. Reconstructing the mosaic glycolytic pathway of the anaerobic eukaryote Monocercomonoides. Eukaryotic Cell. 5: 2138-46. PMID 17071828 DOI: 10.1128/Ec.00258-06  0.437
2006 Kolárová L, Rudolfová J, Hampl V, Skírnisson K. Allobilharzia visceralis gen. nov., sp. nov. (Schistosomatidae-Trematoda) from Cygnus cygnus (L.) (Anatidae). Parasitology International. 55: 179-86. PMID 16627001 DOI: 10.1016/J.Parint.2005.10.009  0.348
2006 Cepicka I, Hampl V, Kulda J, Flegr J. New evolutionary lineages, unexpected diversity, and host specificity in the parabasalid genus Tetratrichomonas. Molecular Phylogenetics and Evolution. 39: 542-51. PMID 16473027 DOI: 10.1016/J.Ympev.2006.01.005  0.396
2006 Hampl V, Vrlík M, Cepicka I, Pecka Z, Kulda J, Tachezy J. Affiliation of Cochlosoma to trichomonads confirmed by phylogenetic analysis of the small-subunit rRNA gene and a new family concept of the order Trichomonadida. International Journal of Systematic and Evolutionary Microbiology. 56: 305-12. PMID 16403903 DOI: 10.1099/Ijs.0.63754-0  0.39
2005 Hampl V, Horner DS, Dyal P, Kulda J, Flegr J, Foster PG, Embley TM. Inference of the phylogenetic position of oxymonads based on nine genes: support for metamonada and excavata. Molecular Biology and Evolution. 22: 2508-18. PMID 16120804 DOI: 10.1093/Molbev/Msi245  0.411
2005 Kolisko M, Cepicka I, Hampl V, Kulda J, Flegr J. The phylogenetic position of enteromonads: a challenge for the present models of diplomonad evolution. International Journal of Systematic and Evolutionary Microbiology. 55: 1729-33. PMID 16014510 DOI: 10.1099/Ijs.0.63542-0  0.714
2004 Kostka M, Hampl V, Cepicka I, Flegr J. Phylogenetic position of Protoopalina intestinalis based on SSU rRNA gene sequence. Molecular Phylogenetics and Evolution. 33: 220-4. PMID 15324850 DOI: 10.1016/J.Ympev.2004.05.009  0.433
2004 Hampl V, Cepicka I, Flegr J, Tachezy J, Kulda J. Critical analysis of the topology and rooting of the parabasalian 16S rRNA tree. Molecular Phylogenetics and Evolution. 32: 711-23. PMID 15288049 DOI: 10.1016/J.Ympev.2004.03.005  0.372
2002 Tachezy J, Tachezy R, Hampl V, Sedinová M, Vanacová S, Vrlík M, Van Ranst M, Flegr J, Kuldaa J. Cattle pathogen tritrichomonas foetus (Riedmüller, 1928) and pig commensal Tritrichomonas suis (Gruby & Delafond, 1843) belong to the same species. The Journal of Eukaryotic Microbiology. 49: 154-63. PMID 12046599 DOI: 10.1111/J.1550-7408.2002.Tb00360.X  0.313
2002 Silberman JD, Simpson AG, Kulda J, Cepicka I, Hampl V, Johnson PJ, Roger AJ. Retortamonad flagellates are closely related to diplomonads--implications for the history of mitochondrial function in eukaryote evolution. Molecular Biology and Evolution. 19: 777-86. PMID 11961110 DOI: 10.1093/Oxfordjournals.Molbev.A004135  0.81
2002 Dvorák J, Vanácová S, Hampl V, Flegr J, Horák P. Comparison of european Trichobilharzia species based on ITS1 and ITS2 sequences. Parasitology. 124: 307-13. PMID 11922432 DOI: 10.1017/S0031182001001238  0.318
2001 Hampl V, Pavlícek A, Flegr J. Construction and bootstrap analysis of DNA fingerprinting-based phylogenetic trees with the freeware program FreeTree: application to trichomonad parasites. International Journal of Systematic and Evolutionary Microbiology. 51: 731-5. PMID 11411692 DOI: 10.1099/00207713-51-3-731  0.317
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