Nicola Patron - Publications

2005 Botany University of British Columbia, Vancouver, Vancouver, BC, Canada 

61 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Dudley QM, Cai YM, Kallam K, Debreyne H, Carrasco Lopez JA, Patron NJ. Biofoundry-assisted expression and characterization of plant proteins. Synthetic Biology (Oxford, England). 6: ysab029. PMID 34693026 DOI: 10.1093/synbio/ysab029  1
2021 Mateos Fernández R, Petek M, Gerasymenko I, Juteršek M, Baebler Š, Kallam K, Moreno Giménez E, Gondolf J, Nordmann A, Gruden K, Orzaez D, Patron NJ. Insect Pest Management in the Age of Synthetic Biology. Plant Biotechnology Journal. PMID 34416790 DOI: 10.1111/pbi.13685  1
2021 Cai YM, Dudley QM, Patron NJ. Measurement of Transgene Copy Number in Plants Using Droplet Digital PCR. Bio-Protocol. 11: e4075. PMID 34327272 DOI: 10.21769/BioProtoc.4075  1
2021 Moffat AD, Elliston A, Patron NJ, Truman AW, Carrasco Lopez JA. A biofoundry workflow for the identification of genetic determinants of microbial growth inhibition. Synthetic Biology (Oxford, England). 6: ysab004. PMID 33623825 DOI: 10.1093/synbio/ysab004  1
2021 Naegeli H, Bresson JL, Dalmay T, Dewhurst IC, Epstein MM, Firbank LG, Guerche P, Hejatko J, Moreno FJ, Nogue F, Rostoks N, Sanchez Serrano JJ, Savoini G, Veromann E, ... ... Patron N, et al. Evaluation of existing guidelines for their adequacy for the molecular characterisation and environmental risk assessment of genetically modified plants obtained through synthetic biology. Efsa Journal. European Food Safety Authority. 19: e06301. PMID 33598046 DOI: 10.2903/j.efsa.2021.6301  0.01
2021 Kemp L, Aldridge DC, Booy O, Bower H, Browne D, Burgmann M, Burt A, Cunningham AA, Dando M, Dick JTA, Dye C, Weiss Evans S, Gallardo B, Godfray HCJ, Goodfellow I, ... ... Patron NJ, et al. 80 questions for UK biological security. Plos One. 16: e0241190. PMID 33406134 DOI: 10.1371/journal.pone.0241190  1
2020 Scheller HV, Patron N, Jensen PE. Editorial: Proceedings of ICPSBBB 2018 - 2 International Conference on Plant Synthetic Biology, Bioengineering and Biotechnology. Frontiers in Plant Science. 11: 614933. PMID 33224177 DOI: 10.3389/fpls.2020.614933  0.01
2020 Cai YM, Carrasco Lopez JA, Patron NJ. Phytobricks: Manual and Automated Assembly of Constructs for Engineering Plants. Methods in Molecular Biology (Clifton, N.J.). 2205: 179-199. PMID 32809200 DOI: 10.1007/978-1-0716-0908-8_11  1
2020 Md Hatta MA, Arora S, Ghosh S, Matny O, Smedley MA, Yu G, Chakraborty S, Bhatt D, Xia X, Steuernagel B, Richardson T, Mago R, Lagudah ES, Patron NJ, Ayliffe M, et al. The wheat Sr22, Sr33, Sr35 and Sr45 genes confer resistance against stem rust in barley. Plant Biotechnology Journal. PMID 32744350 DOI: 10.1111/Pbi.13460  1
2020 Khumsupan P, Kozlowska MA, Orr DJ, Andreou AI, Nakayama N, Patron N, Carmo-Silva E, McCormick AJ. Generating and characterizing single- and multigene mutants of the Rubisco small subunit family in Arabidopsis. Journal of Experimental Botany. PMID 32734287 DOI: 10.1093/Jxb/Eraa316  0.01
2020 Kemp L, Adam L, Boehm CR, Breitling R, Casagrande R, Dando M, Djikeng A, Evans NG, Hammond R, Hills K, Holt LA, Kuiken T, Markotić A, Millett P, Napier JA, ... ... Patron NJ, et al. Bioengineering horizon scan 2020. Elife. 9. PMID 32479263 DOI: 10.7554/Elife.54489  1
2020 Patron NJ. Beyond natural: Synthetic expansions of botanical form and function. The New Phytologist. PMID 32239523 DOI: 10.1111/nph.16562  0.01
2020 Sauret-Güeto S, Frangedakis E, Silvestri L, Rebmann M, Tomaselli M, Markel K, Delmans M, West A, Patron NJ, Haseloff J. Systematic Tools for Reprogramming Plant Gene Expression in a Simple Model, . Acs Synthetic Biology. PMID 32163700 DOI: 10.1021/Acssynbio.9B00511  1
2019 Hillson N, Caddick M, Cai Y, Carrasco JA, Chang MW, Curach NC, Bell DJ, Feuvre RL, Friedman DC, Fu X, Gold ND, Herrgård MJ, Holowko MB, Johnson JR, Johnson RA, ... ... Patron NJ, et al. Author Correction: Building a global alliance of biofoundries. Nature Communications. 10: 3132. PMID 31296848 DOI: 10.1038/S41467-019-10862-1  1
2019 Hillson N, Caddick M, Cai Y, Carrasco JA, Chang MW, Curach NC, Bell DJ, Le Feuvre R, Friedman DC, Fu X, Gold ND, Herrgård MJ, Holowko MB, Johnson JR, Johnson RA, ... ... Patron NJ, et al. Building a global alliance of biofoundries. Nature Communications. 10: 2040. PMID 31068573 DOI: 10.1038/S41467-019-10079-2  1
2019 Tuncel A, Corbin KR, Ahn-Jarvis J, Harris S, Hawkins E, Smedley MA, Harwood W, Warren FJ, Patron NJ, Smith AM. Cas9-mediated mutagenesis of potato starch branching enzymes generates a range of tuber starch phenotypes. Plant Biotechnology Journal. PMID 31033104 DOI: 10.1111/Pbi.13137  1
2019 Kuhaudomlarp S, Pergolizzi G, Patron NJ, Henrissat B, Field RA. Unraveling the subtleties of β-(1→3)-glucan phosphorylase specificity in the GH94, GH149 and GH161 glycoside hydrolase families. The Journal of Biological Chemistry. PMID 30819804 DOI: 10.1074/Jbc.Ra119.007712  0.01
2019 Raitskin O, Schudoma C, West A, Patron NJ. Comparison of efficiency and specificity of CRISPR-associated (Cas) nucleases in plants: An expanded toolkit for precision genome engineering. Plos One. 14: e0211598. PMID 30811422 DOI: 10.1371/journal.pone.0211598  1
2018 Pollak B, Cerda A, Delmans M, Álamos S, Moyano T, West A, Gutiérrez RA, Patron N, Federici F, Haseloff J. Loop assembly: a simple and open system for recursive fabrication of DNA circuits. The New Phytologist. PMID 30521109 DOI: 10.1111/Nph.15625  1
2018 Kahl L, Molloy J, Patron N, Matthewman C, Haseloff J, Grewal D, Johnson R, Endy D. Opening options for material transfer. Nature Biotechnology. 36: 923-927. PMID 30307930 DOI: 10.1038/Nbt.4263  1
2018 Stewart CN, Patron N, Hanson AD, Jez JM. Plant metabolic engineering in the synthetic biology era: plant chassis selection. Plant Cell Reports. PMID 30196331 DOI: 10.1007/S00299-018-2342-1  0.01
2018 Vazquez-Vilar M, Orzaez D, Patron N. DNA assembly standards: Setting the low-level programming code for plant biotechnology. Plant Science : An International Journal of Experimental Plant Biology. 273: 33-41. PMID 29907307 DOI: 10.1016/j.plantsci.2018.02.024  0.01
2018 Ran Y, Patron N, Kay P, Wong D, Buchanan M, Cao YY, Sawbridge T, Davies JP, Mason J, Webb SR, Spangenberg G, Ainley WM, Walsh TA, Hayden MJ. Zinc-Finger Nuclease (ZFN)-mediated precision genome editing of an endogenous gene in hexaploid bread wheat (Triticum aestivum) using a DNA repair template. Plant Biotechnology Journal. PMID 29734518 DOI: 10.1111/pbi.12941  0.01
2018 Halewood M, Chiurugwi T, Sackville Hamilton R, Kurtz B, Marden E, Welch E, Michiels F, Mozafari J, Sabran M, Patron N, Kersey P, Bastow R, Dorius S, Dias S, McCouch S, et al. Plant genetic resources for food and agriculture: opportunities and challenges emerging from the science and information technology revolution. The New Phytologist. PMID 29359808 DOI: 10.1111/Nph.14993  1
2017 Volpi E Silva N, Patron NJ. CRISPR-based tools for plant genome engineering. Emerging Topics in Life Sciences. 1: 135-149. PMID 33525768 DOI: 10.1042/ETLS20170011  0.01
2017 Wintle BC, Boehm CR, Rhodes C, Molloy JC, Millett P, Adam L, Breitling R, Carlson R, Casagrande R, Dando M, Doubleday R, Drexler E, Edwards B, Ellis T, Evans NG, ... ... Patron NJ, et al. A transatlantic perspective on 20 emerging issues in biological engineering. Elife. 6. PMID 29132504 DOI: 10.7554/Elife.30247  1
2017 D'Amore R, Johnson J, Haldenby S, Hall N, Hughes M, Joynson R, Kenny JG, Patron N, Hertz-Fowler C, Hall A. SMRT Gate: A method for validation of synthetic constructs on Pacific Biosciences sequencing platforms. Biotechniques. 63: 13-20. PMID 28701143 DOI: 10.2144/000114565  0.01
2017 Owen C, Patron NJ, Huang A, Osbourn A. Harnessing plant metabolic diversity. Current Opinion in Chemical Biology. 40: 24-30. PMID 28527344 DOI: 10.1016/j.cbpa.2017.04.015  0.01
2017 Boehm CR, Pollak B, Purswani N, Patron N, Haseloff J. Synthetic Botany. Cold Spring Harbor Perspectives in Biology. PMID 28246181 DOI: 10.1101/cshperspect.a023887  1
2016 Patron NJ. DNA Assembly for Plant Biology. Current Protocols in Plant Biology. 1: 604-616. PMID 31725968 DOI: 10.1002/cppb.20038  0.01
2016 Patron NJ. Blueprints for green biotech: development and application of standards for plant synthetic biology. Biochemical Society Transactions. 44: 702-8. PMID 27284031 DOI: 10.1042/BST20160044  0.01
2016 Parry G, Patron N, Bastow R, Matthewman C. Meeting report: GARNet/OpenPlant CRISPR-Cas workshop. Plant Methods. 12: 6. PMID 26823675 DOI: 10.1186/s13007-016-0104-z  1
2016 Raitskin O, Patron NJ. Multi-gene engineering in plants with RNA-guided Cas9 nuclease. Current Opinion in Biotechnology. 37: 69-75. PMID 26707469 DOI: 10.1016/j.copbio.2015.11.008  1
2015 Lawrenson T, Shorinola O, Stacey N, Li C, Østergaard L, Patron N, Uauy C, Harwood W. Induction of targeted, heritable mutations in barley and Brassica oleracea using RNA-guided Cas9 nuclease. Genome Biology. 16: 258. PMID 26616834 DOI: 10.1186/s13059-015-0826-7  1
2015 Carmichael RE, Boyce A, Matthewman C, Patron NJ. An introduction to synthetic biology in plant systems: ERASynBio/OpenPlant summer school for early career researchers, September 2014. The New Phytologist. 208: 20-2. PMID 26311282 DOI: 10.1111/nph.13433  1
2015 Patron NJ, Orzaez D, Marillonnet S, Warzecha H, Matthewman C, Youles M, Raitskin O, Leveau A, Farré G, Rogers C, Smith A, Hibberd J, Webb AA, Locke J, Schornack S, et al. Standards for plant synthetic biology: a common syntax for exchange of DNA parts. The New Phytologist. PMID 26171760 DOI: 10.1111/Nph.13532  1
2015 Belhaj K, Chaparro-Garcia A, Kamoun S, Patron NJ, Nekrasov V. Editing plant genomes with CRISPR/Cas9. Current Opinion in Biotechnology. 32: 76-84. PMID 25437637 DOI: 10.1016/J.Copbio.2014.11.007  1
2014 Engler C, Youles M, Gruetzner R, Ehnert TM, Werner S, Jones JD, Patron NJ, Marillonnet S. A golden gate modular cloning toolbox for plants. Acs Synthetic Biology. 3: 839-43. PMID 24933124 DOI: 10.1021/Sb4001504  0.01
2014 Patron NJ. DNA assembly for plant biology: techniques and tools. Current Opinion in Plant Biology. 19: 14-9. PMID 24632010 DOI: 10.1016/j.pbi.2014.02.004  0.01
2014 Giordano A, Liu Z, Panter SN, Dimech AM, Shang Y, Wijesinghe H, Fulgueras K, Ran Y, Mouradov A, Rochfort S, Patron NJ, Spangenberg GC. Reduced lignin content and altered lignin composition in the warm season forage grass Paspalum dilatatum by down-regulation of a Cinnamoyl CoA reductase gene. Transgenic Research. 23: 503-17. PMID 24504635 DOI: 10.1007/s11248-014-9784-1  0.01
2011 Santelia D, Kötting O, Seung D, Schubert M, Thalmann M, Bischof S, Meekins DA, Lutz A, Patron N, Gentry MS, Allain FH, Zeeman SC. The phosphoglucan phosphatase like sex Four2 dephosphorylates starch at the C3-position in Arabidopsis. The Plant Cell. 23: 4096-111. PMID 22100529 DOI: 10.1105/Tpc.111.092155  1
2010 Wilson-O'Brien AL, Patron N, Rogers S. Evolutionary ancestry and novel functions of the mammalian glucose transporter (GLUT) family. Bmc Evolutionary Biology. 10: 152. PMID 20487568 DOI: 10.1186/1471-2148-10-152  0.01
2009 Elias M, Patron NJ, Keeling PJ. The RAB family GTPase Rab1A from Plasmodium falciparum defines a unique paralog shared by chromalveolates and rhizaria. The Journal of Eukaryotic Microbiology. 56: 348-56. PMID 19602080 DOI: 10.1111/J.1550-7408.2009.00408.X  1
2008 Patron NJ, Durnford DG, Kopriva S. Sulfate assimilation in eukaryotes: fusions, relocations and lateral transfers. Bmc Evolutionary Biology. 8: 39. PMID 18248682 DOI: 10.1186/1471-2148-8-39  1
2007 Patron NJ, Waller RF, Cozijnsen AJ, Straney DC, Gardiner DM, Nierman WC, Howlett BJ. Origin and distribution of epipolythiodioxopiperazine (ETP) gene clusters in filamentous ascomycetes. Bmc Evolutionary Biology. 7: 174. PMID 17897469 DOI: 10.1186/1471-2148-7-174  1
2007 Patron NJ, Waller RF. Transit peptide diversity and divergence: A global analysis of plastid targeting signals. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 29: 1048-58. PMID 17876808 DOI: 10.1002/bies.20638  1
2007 Rogers MB, Patron NJ, Keeling PJ. Horizontal transfer of a eukaryotic plastid-targeted protein gene to cyanobacteria. Bmc Biology. 5: 26. PMID 17584924 DOI: 10.1186/1741-7007-5-26  1
2007 Patron NJ, Inagaki Y, Keeling PJ. Multiple gene phylogenies support the monophyly of cryptomonad and haptophyte host lineages. Current Biology : Cb. 17: 887-91. PMID 17462896 DOI: 10.1016/J.Cub.2007.03.069  1
2006 Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, ... ... Patron NJ, et al. Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote. Plos Biology. 4: e286. PMID 16933976 DOI: 10.1371/Journal.Pbio.0040286  1
2006 Gile GH, Patron NJ, Keeling PJ. EFL GTPase in Cryptomonads and the Distribution of EFL and EF-1α in Chromalveolates Protist. 157: 435-444. PMID 16904374 DOI: 10.1016/J.Protis.2006.06.002  1
2006 Patron NJ, Rogers MB, Keeling PJ. Comparative rates of evolution in endosymbiotic nuclear genomes. Bmc Evolutionary Biology. 6: 46. PMID 16772046 DOI: 10.1186/1471-2148-6-46  1
2006 Waller RF, Patron NJ, Keeling PJ. Phylogenetic history of plastid-targeted proteins in the peridinin-containing dinoflagellate Heterocapsa triquetra International Journal of Systematic and Evolutionary Microbiology. 56: 1439-1447. PMID 16738125 DOI: 10.1099/Ijs.0.64061-0  1
2006 Patron NJ, Waller RF, Keeling PJ. A tertiary plastid uses genes from two endosymbionts Journal of Molecular Biology. 357: 1373-1382. PMID 16490209 DOI: 10.1016/J.Jmb.2006.01.084  1
2005 Williams BA, Slamovits CH, Patron NJ, Fast NM, Keeling PJ. A high frequency of overlapping gene expression in compacted eukaryotic genomes. Proceedings of the National Academy of Sciences of the United States of America. 102: 10936-41. PMID 16037215 DOI: 10.1073/Pnas.0501321102  1
2005 Takishita K, Patron NJ, Ishida KI, Maruyama T, Keeling PJ. A transcriptional fusion of genes encoding glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and enolase in dinoflagellates Journal of Eukaryotic Microbiology. 52: 343-348. PMID 16014012 DOI: 10.1111/J.1550-7408.2005.00042X  1
2005 Patron NJ, Waller RF, Archibald JM, Keeling PJ. Complex protein targeting to dinoflagellate plastids. Journal of Molecular Biology. 348: 1015-24. PMID 15843030 DOI: 10.1016/J.Jmb.2005.03.030  1
2005 Patron NJ, Keeling PJ. Common evolutionary origin of starch biosynthetic enzymes in green and red algae Journal of Phycology. 41: 1131-1141. DOI: 10.1111/J.1529-8817.2005.00135.X  1
2004 Patron NJ, Rogers MB, Keeling PJ. Gene replacement of fructose-1,6-bisphosphate aldolase supports the hypothesis of a single photosynthetic ancestor of chromalveolates. Eukaryotic Cell. 3: 1169-75. PMID 15470245 DOI: 10.1128/Ec.3.5.1169-1175.2004  1
2004 Patron NJ, Greber B, Fahy BF, Laurie DA, Parker ML, Denyer K. The lys5 mutations of barley reveal the nature and importance of plastidial ADP-Glc transporters for starch synthesis in cereal endosperm. Plant Physiology. 135: 2088-97. PMID 15299120 DOI: 10.1104/pp.104.045203  1
2003 Johnson PE, Patron NJ, Bottrill AR, Dinges JR, Fahy BF, Parker ML, Waite DN, Denyer K. A low-starch barley mutant, risø 16, lacking the cytosolic small subunit of ADP-glucose pyrophosphorylase, reveals the importance of the cytosolic isoform and the identity of the plastidial small subunit. Plant Physiology. 131: 684-96. PMID 12586892 DOI: 10.1104/Pp.013094  1
2002 Patron NJ, Smith AM, Fahy BF, Hylton CM, Naldrett MJ, Rossnagel BG, Denyer K. The altered pattern of amylose accumulation in the endosperm of low-amylose barley cultivars is attributable to a single mutant allele of granule-bound starch synthase I with a deletion in the 5'-non-coding region. Plant Physiology. 130: 190-8. PMID 12226499 DOI: 10.1104/pp.005454  1
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