☰

Serkan Erdin, Ph.D. - Publications

Affiliations: 
2002 Texas A & M University, College Station, TX, United States 
Area:
Condensed Matter Physics
Tree Info Similar researchers PubMed Report error

22 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Seabra CM, Aneichyk T, Erdin S, Tai DJC, De Esch CEF, Razaz P, An Y, Manavalan P, Ragavendran A, Stortchevoi A, Abad C, Young JI, Maciel P, Talkowski ME, Gusella JF. Transcriptional consequences of MBD5 disruption in mouse brain and CRISPR-derived neurons. Molecular Autism. 11: 45. PMID 32503625 DOI: 10.1186/S13229-020-00354-1  0.305
2017 Seabra CM, Szoko N, Erdin S, Ragavendran A, Stortchevoi A, Maciel P, Lundberg K, Schlatzer D, Smith J, Talkowski ME, Gusella JF, Natowicz MR. A novel microduplication of ARID1B: Clinical, genetic, and proteomic findings. American Journal of Medical Genetics. Part A. PMID 28691782 DOI: 10.1002/Ajmg.A.38327  0.329
2017 Shaw ND, Brand H, Kupchinsky ZA, Bengani H, Plummer L, Jones TI, Erdin S, Williamson KA, Rainger J, Stortchevoi A, Samocha K, Currall BB, Dunican DS, Collins RL, Willer JR, et al. SMCHD1 mutations associated with a rare muscular dystrophy can also cause isolated arhinia and Bosma arhinia microphthalmia syndrome. Nature Genetics. PMID 28067909 DOI: 10.1038/Ng.3743  0.324
2015 Karaca E, Harel T, Pehlivan D, Jhangiani SN, Gambin T, Coban Akdemir Z, Gonzaga-Jauregui C, Erdin S, Bayram Y, Campbell IM, Hunter JV, Atik MM, Van Esch H, Yuan B, Wiszniewski W, et al. Genes that Affect Brain Structure and Function Identified by Rare Variant Analyses of Mendelian Neurologic Disease. Neuron. 88: 499-513. PMID 26539891 DOI: 10.1016/J.Neuron.2015.09.048  0.315
2015 Karaca E, Yuregir OO, Bozdogan ST, Aslan H, Pehlivan D, Jhangiani SN, Akdemir ZC, Gambin T, Bayram Y, Atik MM, Erdin S, Muzny D, Gibbs RA, Lupski JR. Rare variants in the notch signaling pathway describe a novel type of autosomal recessive Klippel-Feil syndrome. American Journal of Medical Genetics. Part A. 167: 2795-9. PMID 26238661 DOI: 10.1002/Ajmg.A.37263  0.315
2014 Sugathan A, Biagioli M, Golzio C, Erdin S, Blumenthal I, Manavalan P, Ragavendran A, Brand H, Lucente D, Miles J, Sheridan SD, Stortchevoi A, Kellis M, Haggarty SJ, Katsanis N, et al. CHD8 regulates neurodevelopmental pathways associated with autism spectrum disorder in neural progenitors. Proceedings of the National Academy of Sciences of the United States of America. 111: E4468-77. PMID 25294932 DOI: 10.1073/Pnas.1405266111  0.316
2013 Amin SR, Erdin S, Ward RM, Lua RC, Lichtarge O. Prediction and experimental validation of enzyme substrate specificity in protein structures. Proceedings of the National Academy of Sciences of the United States of America. 110: E4195-202. PMID 24145433 DOI: 10.1073/Pnas.1305162110  0.324
2013 Wilkins AD, Venner E, Marciano DC, Erdin S, Atri B, Lua RC, Lichtarge O. Accounting for epistatic interactions improves the functional analysis of protein structures. Bioinformatics (Oxford, England). 29: 2714-21. PMID 24021383 DOI: 10.1093/Bioinformatics/Btt489  0.332
2013 Erdin S, Venner E, Lisewski AM, Lichtarge O. Function prediction from networks of local evolutionary similarity in protein structure. Bmc Bioinformatics. 14: S6. PMID 23514548 DOI: 10.1186/1471-2105-14-S3-S6  0.332
2013 Radivojac P, Clark WT, Oron TR, Schnoes AM, Wittkop T, Sokolov A, Graim K, Funk C, Verspoor K, Ben-Hur A, Pandey G, Yunes JM, Talwalkar AS, Repo S, Souza ML, ... ... Erdin S, et al. A large-scale evaluation of computational protein function prediction. Nature Methods. 10: 221-7. PMID 23353650 DOI: 10.1038/Nmeth.2340  0.311
2012 Bachman BJ, Venner E, Lua RC, Erdin S, Lichtarge O. ETAscape: analyzing protein networks to predict enzymatic function and substrates in Cytoscape. Bioinformatics (Oxford, England). 28: 2186-8. PMID 22689386 DOI: 10.1093/Bioinformatics/Bts331  0.31
2012 Wilkins A, Erdin S, Lua R, Lichtarge O. Evolutionary trace for prediction and redesign of protein functional sites. Methods in Molecular Biology (Clifton, N.J.). 819: 29-42. PMID 22183528 DOI: 10.1007/978-1-61779-465-0_3  0.324
2011 Erdin S, Lisewski AM, Lichtarge O. Protein function prediction: towards integration of similarity metrics. Current Opinion in Structural Biology. 21: 180-8. PMID 21353529 DOI: 10.1016/J.Sbi.2011.02.001  0.324
2010 Venner E, Lisewski AM, Erdin S, Ward RM, Amin SR, Lichtarge O. Accurate protein structure annotation through competitive diffusion of enzymatic functions over a network of local evolutionary similarities. Plos One. 5: e14286. PMID 21179190 DOI: 10.1371/Journal.Pone.0014286  0.325
2010 Wilkins AD, Lua R, Erdin S, Ward RM, Lichtarge O. Sequence and structure continuity of evolutionary importance improves protein functional site discovery and annotation Protein Science. 19: 1296-1311. PMID 20506260 DOI: 10.1002/Pro.406  0.327
2010 Erdin S, Ward RM, Venner E, Lichtarge O. Evolutionary trace annotation of protein function in the structural proteome. Journal of Molecular Biology. 396: 1451-73. PMID 20036248 DOI: 10.1016/J.Jmb.2009.12.037  0.34
2009 Ward RM, Venner E, Daines B, Murray S, Erdin S, Kristensen DM, Lichtarge O. Evolutionary Trace Annotation Server: automated enzyme function prediction in protein structures using 3D templates. Bioinformatics (Oxford, England). 25: 1426-7. PMID 19307237 DOI: 10.1093/Bioinformatics/Btp160  0.314
2008 Ward RM, Erdin S, Tran TA, Kristensen DM, Lisewski AM, Lichtarge O. De-orphaning the structural proteome through reciprocal comparison of evolutionarily important structural features. Plos One. 3: e2136. PMID 18461181 DOI: 10.1371/Journal.Pone.0002136  0.333
2008 Kristensen DM, Ward RM, Lisewski AM, Erdin S, Chen BY, Fofanov VY, Kimmel M, Kavraki LE, Lichtarge O. Prediction of enzyme function based on 3D templates of evolutionarily important amino acids. Bmc Bioinformatics. 9: 17. PMID 18190718 DOI: 10.1186/1471-2105-9-17  0.321
2002 Erdin S, Lyuksyutov IF, Pokrovsky VL, Vinokur VM. Topological textures in a ferromagnet-superconductor bilayer. Physical Review Letters. 88: 017001. PMID 11800979 DOI: 10.1103/Physrevlett.88.017001  0.539
2002 Erdin S, Kayali AF, Lyuksyutov IF, Pokrovsky VL. Interaction of mesoscopic magnetic textures with superconductors Physical Review B. 66. DOI: 10.1103/Physrevb.66.014414  0.535
2001 ERDIN S, POKROVSKY VL. OSCILLATIONS OF SPHERICAL AND CYLINDRICAL SHELLS International Journal of Modern Physics B. 15: 3099-3105. DOI: 10.1142/S021797920100721X  0.501
Show low-probability matches.