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Meng Chen - Publications

Affiliations: 
1999-2007 Salk Institute for Biological Studies, La Jolla, CA, United States 
 2008-2015 Department of Biology Duke University, Durham, NC 
 2015- Department of Botany and Plant Sciences University of California, Riverside, Riverside, CA, United States 
Website:
http://www.plasticgenome.org/
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41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Liu X, Cao X, Chen M, Li D, Zhang Z. Two transcription factors RhERF005/RhCCCH12 regulate rose resistance to Botrytis cinerea by modulating cytokinin levels. Journal of Experimental Botany. PMID 38314882 DOI: 10.1093/jxb/erae040  0.312
2023 Kim RJA, Fan D, He J, Kim K, Du J, Chen M. Photobodies enable the phase-separation and counterbalance of opposing phytochrome B actions in PIF5 degradation and stabilization. Biorxiv : the Preprint Server For Biology. PMID 38014306 DOI: 10.1101/2023.11.12.566724  0.347
2023 Liu W, Lowrey H, Leung CC, Adamchek C, Du J, He J, Chen M, Gendron JM. The circadian clock regulates PIF3 protein stability in parallel to red light. Biorxiv : the Preprint Server For Biology. PMID 37781622 DOI: 10.1101/2023.09.18.558326  0.373
2023 Quint M, Delker C, Balasubramanian S, Balcerowicz M, Casal JJ, Castroverde CDM, Chen M, Chen X, De Smet I, Fankhauser C, Franklin KA, Halliday KJ, Hayes S, Jiang D, Jung JH, et al. 25 Years of thermomorphogenesis research: milestones and perspectives. Trends in Plant Science. PMID 37574427 DOI: 10.1016/j.tplants.2023.07.001  0.707
2023 Sang Q, Fan L, Liu T, Qiu Y, Du J, Mo B, Chen M, Chen X. MicroRNA156 conditions auxin sensitivity to enable growth plasticity in response to environmental changes in Arabidopsis. Nature Communications. 14: 1449. PMID 36949101 DOI: 10.1038/s41467-023-36774-9  0.745
2023 Willige BC, Zander M, Yoo CY, Phan A, Garza RM, Wanamaker SA, He Y, Nery JR, Chen H, Chen M, Ecker JR, Chory J. Author Correction: PHYTOCHROME-INTERACTING FACTORs trigger environmentally responsive chromatin dynamics in plants. Nature Genetics. PMID 36690790 DOI: 10.1038/s41588-023-01299-w  0.75
2022 Hwang Y, Han S, Yoo CY, Hong L, You C, Le BH, Shi H, Zhong S, Hoecker U, Chen X, Chen M. Anterograde signaling controls plastid transcription via sigma factors separately from nuclear photosynthesis genes. Nature Communications. 13: 7440. PMID 36460634 DOI: 10.1038/s41467-022-35080-0  0.784
2021 Yoo CY, He J, Sang Q, Qiu Y, Long L, Kim RJ, Chong EG, Hahm J, Morffy N, Zhou P, Strader LC, Nagatani A, Mo B, Chen X, Chen M. Direct photoresponsive inhibition of a p53-like transcription activation domain in PIF3 by Arabidopsis phytochrome B. Nature Communications. 12: 5614. PMID 34556672 DOI: 10.1038/s41467-021-25909-5  0.813
2021 Willige BC, Zander M, Yoo CY, Phan A, Garza RM, Trigg SA, He Y, Nery JR, Chen H, Chen M, Ecker JR, Chory J. PHYTOCHROME-INTERACTING FACTORs trigger environmentally responsive chromatin dynamics in plants. Nature Genetics. PMID 34140685 DOI: 10.1038/s41588-021-00882-3  0.78
2021 Qiu Y, Pasoreck EK, Yoo CY, He J, Wang H, Bajracharya A, Li M, Larsen HD, Cheung S, Chen M. RCB initiates Arabidopsis thermomorphogenesis by stabilizing the thermoregulator PIF4 in the daytime. Nature Communications. 12: 2042. PMID 33824329 DOI: 10.1038/s41467-021-22313-x  0.74
2020 Hahm J, Kim K, Qiu Y, Chen M. Publisher Correction: Increasing ambient temperature progressively disassembles Arabidopsis phytochrome B from individual photobodies with distinct thermostabilities. Nature Communications. 11: 1966. PMID 32312985 DOI: 10.1038/S41467-020-16008-Y  0.75
2020 Hahm J, Kim K, Qiu Y, Chen M. Increasing ambient temperature progressively disassemble Arabidopsis phytochrome B from individual photobodies with distinct thermostabilities. Nature Communications. 11: 1660. PMID 32245953 DOI: 10.1038/S41467-020-15526-Z  0.779
2019 Yoo CY, Williams D, Chen M. Quantitative Analysis of Photobodies. Methods in Molecular Biology (Clifton, N.J.). 2026: 135-141. PMID 31317408 DOI: 10.1007/978-1-4939-9612-4_10  0.725
2019 Yoo CY, Pasoreck EK, Wang H, Cao J, Blaha GM, Weigel D, Chen M. Phytochrome activates the plastid-encoded RNA polymerase for chloroplast biogenesis via nucleus-to-plastid signaling. Nature Communications. 10: 2629. PMID 31201355 DOI: 10.1038/S41467-019-10518-0  0.775
2019 Yang EJ, Yoo CY, Liu J, Wang H, Cao J, Li FW, Pryer KM, Sun TP, Weigel D, Zhou P, Chen M. NCP activates chloroplast transcription by controlling phytochrome-dependent dual nuclear and plastidial switches. Nature Communications. 10: 2630. PMID 31201314 DOI: 10.1038/S41467-019-10517-1  0.791
2019 Qiu Y, Li M, Kim RJ, Moore CM, Chen M. Daytime temperature is sensed by phytochrome B in Arabidopsis through a transcriptional activator HEMERA. Nature Communications. 10: 140. PMID 30635559 DOI: 10.1038/S41467-018-08059-Z  0.828
2018 Chen M, Lyu G, Han M, Nie H, Shen T, Chen W, Niu Y, Song Y, Li X, Li H, Chen X, Wang Z, Xia Z, Li W, Tian XL, et al. 3' UTR lengthening as a novel mechanism in regulating cellular senescence. Genome Research. PMID 29440281 DOI: 10.1101/Gr.224451.117  0.305
2017 Qiu Y, Pasoreck EK, Reddy AK, Nagatani A, Ma W, Chory J, Chen M. Mechanism of early light signaling by the carboxy-terminal output module of Arabidopsis phytochrome B. Nature Communications. 8: 1905. PMID 29199270 DOI: 10.1038/S41467-017-02062-6  0.816
2017 Nevarez PA, Qiu Y, Inoue H, Yoo CY, Benfey PN, Schnell DJ, Chen M. Mechanism of Dual Targeting of the Phytochrome Signaling Component HEMERA/pTAC12 to Plastids and the Nucleus. Plant Physiology. 173: 1953-1966. PMID 28232584 DOI: 10.1104/Pp.16.00116  0.796
2016 Huang H, Yoo CY, Bindbeutel R, Goldsworthy J, Tielking A, Alvarez S, Naldrett MJ, Evans BS, Chen M, Nusinow DA. PCH1 integrates circadian and light-signaling pathways to control photoperiod-responsive growth in Arabidopsis. Elife. 5. PMID 26839287 DOI: 10.7554/Elife.13292  0.777
2016 Huang H, Yoo CY, Bindbeutel R, Goldsworthy J, Tielking A, Alvarez S, Naldrett MJ, Evans BS, Chen M, Nusinow DA. Author response: PCH1 integrates circadian and light-signaling pathways to control photoperiod-responsive growth in Arabidopsis Elife. DOI: 10.7554/Elife.13292.033  0.735
2015 Qiu Y, Li M, Pasoreck EK, Long L, Shi Y, Galvão RM, Chou CL, Wang H, Sun AY, Zhang YC, Jiang A, Chen M. HEMERA Couples the Proteolysis and Transcriptional Activity of PHYTOCHROME INTERACTING FACTORs in Arabidopsis Photomorphogenesis. The Plant Cell. 27: 1409-27. PMID 25944101 DOI: 10.1105/Tpc.114.136093  0.777
2014 Van Buskirk EK, Reddy AK, Nagatani A, Chen M. Photobody Localization of Phytochrome B Is Tightly Correlated with Prolonged and Light-Dependent Inhibition of Hypocotyl Elongation in the Dark. Plant Physiology. 165: 595-607. PMID 24769533 DOI: 10.1104/Pp.114.236661  0.423
2014 Feng CM, Qiu Y, Van Buskirk EK, Yang EJ, Chen M. Light-regulated gene repositioning in Arabidopsis. Nature Communications. 5: 3027. PMID 24390011 DOI: 10.1038/Ncomms4027  0.828
2012 Galvão RM, Li M, Kothadia SM, Haskel JD, Decker PV, Van Buskirk EK, Chen M. Photoactivated phytochromes interact with HEMERA and promote its accumulation to establish photomorphogenesis in Arabidopsis. Genes & Development. 26: 1851-63. PMID 22895253 DOI: 10.1101/Gad.193219.112  0.822
2012 Buskirk EKV, Decker PV, Chen M. Photobodies in light signaling Plant Physiology. 158: 52-60. PMID 21951469 DOI: 10.1104/Pp.111.186411  0.47
2011 Chen M, Chory J. Phytochrome signaling mechanisms and the control of plant development. Trends in Cell Biology. 21: 664-71. PMID 21852137 DOI: 10.1016/J.Tcb.2011.07.002  0.687
2010 Chen M, Galvão RM, Li M, Burger B, Bugea J, Bolado J, Chory J. Arabidopsis HEMERA/pTAC12 initiates photomorphogenesis by phytochromes. Cell. 141: 1230-40. PMID 20603003 DOI: 10.1016/J.Cell.2010.05.007  0.776
2008 Fankhauser C, Chen M. Transposing phytochrome into the nucleus. Trends in Plant Science. 13: 596-601. PMID 18824397 DOI: 10.1016/J.Tplants.2008.08.007  0.633
2008 Chen M. Phytochrome nuclear body: an emerging model to study interphase nuclear dynamics and signaling. Current Opinion in Plant Biology. 11: 503-8. PMID 18691930 DOI: 10.1016/J.Pbi.2008.06.012  0.437
2007 Chen M, Hancock LC, Lopes JM. Transcriptional regulation of yeast phospholipid biosynthetic genes. Biochimica Et Biophysica Acta. 1771: 310-21. PMID 16854618 DOI: 10.1016/J.Bbalip.2006.05.017  0.332
2005 Chen M, Tao Y, Lim J, Shaw A, Chory J. Regulation of phytochrome B nuclear localization through light-dependent unmasking of nuclear-localization signals. Current Biology : Cb. 15: 637-42. PMID 15823535 DOI: 10.1016/J.Cub.2005.02.028  0.743
2004 Chen M, Chory J, Fankhauser C. Light signal transduction in higher plants. Annual Review of Genetics. 38: 87-117. PMID 15568973 DOI: 10.1146/Annurev.Genet.38.072902.092259  0.726
2003 Chen M, Schwab R, Chory J. Characterization of the requirements for localization of phytochrome B to nuclear bodies. Proceedings of the National Academy of Sciences of the United States of America. 100: 14493-8. PMID 14612575 DOI: 10.1073/Pnas.1935989100  0.639
2002 Wang ZY, Nakano T, Gendron J, He J, Chen M, Vafeados D, Yang Y, Fujioka S, Yoshida S, Asami T, Chory J. Nuclear-localized BZR1 mediates brassinosteroid-induced growth and feedback suppression of brassinosteroid biosynthesis. Developmental Cell. 2: 505-13. PMID 11970900 DOI: 10.1016/S1534-5807(02)00153-3  0.685
2000 Chen M, Choi Y, Voytas DF, Rodermel S. Mutations in the Arabidopsis VAR2 locus cause leaf variegation due to the loss of a chloroplast FtsH protease Plant Journal. 22: 303-313. PMID 10849347 DOI: 10.1046/J.1365-313X.2000.00738.X  0.764
1999 Chen M, Jensen M, Rodermel S. The yellow variegated mutant of Arabidopsis is plastid autonomous and delayed in chloroplast biogenesis. The Journal of Heredity. 90: 207-14. PMID 9987930 DOI: 10.1093/Jhered/90.1.207  0.729
1998 Martin BL, Luo S, Kintanar A, Chen M, Graves DJ. Effect of citrulline for arginine replacement on the structure and turnover of phosphopeptide substrates of protein phosphatase-1 Archives of Biochemistry and Biophysics. 359: 179-191. PMID 9808759 DOI: 10.1006/Abbi.1998.0912  0.572
1994 Chen M, Chen L, Fromm HJ. Replacement of glutamic acid 29 with glutamine leads to a loss of cooperativity for AMP with porcine fructose-1,6-bisphosphatase Journal of Biological Chemistry. 269: 5554-5558. PMID 7907084  0.499
1993 Burton VA, Chen M, Ong WC, Ling T, Fromm HJ, Stayton MM. High-level expression of porcine fructose-1,6-bisphosphatase in Escherichia coli: purification and characterization of the enzyme. Biochemical and Biophysical Research Communications. 192: 511-7. PMID 8387281 DOI: 10.1006/Bbrc.1993.1445  0.541
1993 Chen LR, Hegde R, Chen M, Fromm HJ. Site-Specific Mutagenesis of the Metal Binding Sites of Porcine Fructose-1,6-Bisphosphatase Archives of Biochemistry and Biophysics. 307: 350-354. PMID 8274021 DOI: 10.1006/Abbi.1993.1599  0.549
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