Joseph W. Brown, Ph.D. - Publications

Affiliations: 
Ecology and Evolutionary Biology University of Michigan, Ann Arbor, Ann Arbor, MI 
Area:
phylogenetics; evolution;

35/233 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Smith SA, Walker-Hale N, Walker JF, Brown JW. PHYLOGENETIC CONFLICTS, COMBINABILITY, AND DEEP PHYLOGENOMICS IN PLANTS. Systematic Biology. PMID 31747023 DOI: 10.1093/Sysbio/Syz078  0.751
2019 Sarver BAJ, Pennell MW, Brown JW, Keeble S, Hardwick KM, Sullivan J, Harmon LJ. The choice of tree prior and molecular clock does not substantially affect phylogenetic inferences of diversification rates. Peerj. 7: e6334. PMID 30886768 DOI: 10.7717/Peerj.6334  0.766
2019 Franz NM, Musher LJ, Brown JW, Yu S, Ludäscher B. Verbalizing phylogenomic conflict: Representation of node congruence across competing reconstructions of the neoavian explosion. Plos Computational Biology. 15: e1006493. PMID 30768597 DOI: 10.1371/Journal.Pcbi.1006493  0.342
2018 Wang N, Yang Y, Moore MJ, Brockington SF, Walker JF, Brown JW, Liang B, Feng T, Edwards C, Mikenas J, Olivieri J, Hutchison V, Timoneda A, Stoughton T, Puente R, et al. Evolution of Portulacineae marked by gene tree conflict and gene family expansion associated with adaptation to harsh environments. Molecular Biology and Evolution. PMID 30371871 DOI: 10.1093/Molbev/Msy200  0.756
2018 Walker JF, Brown JW, Smith SA. Analyzing contentious relationships and outlier genes in phylogenomics. Systematic Biology. PMID 29893968 DOI: 10.1093/Sysbio/Syy043  0.75
2018 Smith SA, Brown JW, Walker JF. So many genes, so little time: A practical approach to divergence-time estimation in the genomic era. Plos One. 13: e0197433. PMID 29772020 DOI: 10.1371/Journal.Pone.0197433  0.75
2018 Smith SA, Brown JW. Constructing a broadly inclusive seed plant phylogeny. American Journal of Botany. 105: 302-314. PMID 29746720 DOI: 10.1002/Ajb2.1019  0.569
2018 Pease JB, Brown JW, Walker JF, Hinchliff CE, Smith SA. Quartet Sampling distinguishes lack of support from conflicting support in the green plant tree of life. American Journal of Botany. 105: 385-403. PMID 29746719 DOI: 10.1002/Ajb2.1016  0.725
2017 Brown JW, Parins-Fukuchi C, Stull GW, Vargas OM, Smith SA. Bayesian and likelihood phylogenetic reconstructions of morphological traits are not discordant when taking uncertainty into consideration: a comment on Puttick et al. Proceedings. Biological Sciences. 284. PMID 29021179 DOI: 10.1098/Rspb.2017.0986  0.498
2017 Brown JW, Smith SA. The Past Sure Is Tense: On Interpreting Phylogenetic Divergence Time Estimates. Systematic Biology. PMID 28945912 DOI: 10.1093/Sysbio/Syx074  0.58
2017 Smith SA, Brown JW, Yang Y, Bruenn R, Drummond CP, Brockington SF, Walker JF, Last N, Douglas NA, Moore MJ. Disparity, diversity, and duplications in the Caryophyllales. The New Phytologist. PMID 28892163 DOI: 10.1111/Nph.14772  0.754
2017 Brown JW, Wang N, Smith SA. The development of scientific consensus: analyzing conflict and concordance among avian phylogenies. Molecular Phylogenetics and Evolution. PMID 28797692 DOI: 10.1016/J.Ympev.2017.08.002  0.589
2017 Brown JW, Walker JF, Smith SA. phyx: Phylogenetic tools for Unix. Bioinformatics (Oxford, England). PMID 28174903 DOI: 10.1093/Bioinformatics/Btx063  0.709
2016 Johnson JA, Brown JW, Fuchs J, Mindell DP. Multi-locus phylogenetic inference among New World Vultures (Aves: Cathartidae). Molecular Phylogenetics and Evolution. PMID 27601346 DOI: 10.1016/J.Ympev.2016.08.025  0.649
2016 Michonneau F, Brown JW, Winter DJ. rotl: an R package to interact with the Open Tree of Life data Methods in Ecology and Evolution. 7: 1476-1481. DOI: 10.1111/2041-210X.12593  0.411
2015 Smith SA, Moore MJ, Brown JW, Yang Y. Analysis of phylogenomic datasets reveals conflict, concordance, and gene duplications with examples from animals and plants. Bmc Evolutionary Biology. 15: 150. PMID 26239519 DOI: 10.1186/S12862-015-0423-0  0.639
2015 Stein RW, Brown JW, Mooers AØ. A molecular genetic time scale demonstrates Cretaceous origins and multiple diversification rate shifts within the order Galliformes (Aves). Molecular Phylogenetics and Evolution. PMID 26140861 DOI: 10.1016/J.Ympev.2015.06.005  0.411
2015 Tank DC, Eastman JM, Pennell MW, Soltis PS, Soltis DE, Hinchliff CE, Brown JW, Sessa EB, Harmon LJ. Nested radiations and the pulse of angiosperm diversification: increased diversification rates often follow whole genome duplications. The New Phytologist. 207: 454-67. PMID 26053261 DOI: 10.1111/Nph.13491  0.743
2015 McTavish EJ, Hinchliff CE, Allman JF, Brown JW, Cranston KA, Holder MT, Rees JA, Smith SA. Phylesystem: a git-based data store for community-curated phylogenetic estimates. Bioinformatics (Oxford, England). PMID 25940563 DOI: 10.1093/Bioinformatics/Btv276  0.777
2015 Smith SA, Moore MJ, Brown JW, Yang Y. Analysis of phylogenomic datasets reveals conflict, concordance, and gene duplications with examples from animals and plants Bmc Evolutionary Biology. 15. DOI: 10.1186/s12862-015-0423-0  0.541
2014 Pennell MW, Eastman JM, Slater GJ, Brown JW, Uyeda JC, FitzJohn RG, Alfaro ME, Harmon LJ. geiger v2.0: an expanded suite of methods for fitting macroevolutionary models to phylogenetic trees. Bioinformatics (Oxford, England). 30: 2216-8. PMID 24728855 DOI: 10.1093/Bioinformatics/Btu181  0.748
2014 Hernández-Hernández T, Brown JW, Schlumpberger BO, Eguiarte LE, Magallón S. Beyond aridification: multiple explanations for the elevated diversification of cacti in the New World Succulent Biome. The New Phytologist. 202: 1382-97. PMID 24611540 DOI: 10.1111/Nph.12752  0.408
2014 Rabosky DL, Grundler M, Anderson C, Title P, Shi JJ, Brown JW, Huang H, Larson JG. BAMMtools: An R package for the analysis of evolutionary dynamics on phylogenetic trees Methods in Ecology and Evolution. 5: 701-707. DOI: 10.1111/2041-210X.12199  0.417
2013 Smith SA, Brown JW, Hinchliff CE. Analyzing and synthesizing phylogenies using tree alignment graphs. Plos Computational Biology. 9: e1003223. PMID 24086118 DOI: 10.1371/Journal.Pcbi.1003223  0.773
2013 Stoltzfus A, Lapp H, Matasci N, Deus H, Sidlauskas B, Zmasek CM, Vaidya G, Pontelli E, Cranston K, Vos R, Webb CO, Harmon LJ, Pirrung M, O'Meara B, Pennell MW, ... ... Brown JW, et al. Phylotastic! Making tree-of-life knowledge accessible, reusable and convenient. Bmc Bioinformatics. 14: 158. PMID 23668630 DOI: 10.1186/1471-2105-14-158  0.758
2012 Rosenblum EB, Sarver BA, Brown JW, Des Roches S, Hardwick KM, Hether TD, Eastman JM, Pennell MW, Harmon LJ. Goldilocks Meets Santa Rosalia: An Ephemeral Speciation Model Explains Patterns of Diversification Across Time Scales. Evolutionary Biology. 39: 255-261. PMID 22707806 DOI: 10.1007/S11692-012-9171-X  0.749
2012 Mitchell A, Li R, Brown JW, Schönberger I, Wen J. Ancient divergence and biogeography of Raukaua (Araliaceae) and close relatives in the southern hemisphere Australian Systematic Botany. 25: 432-446. DOI: 10.1071/Sb12020  0.355
2011 Cho S, Zwick A, Regier JC, Mitter C, Cummings MP, Yao J, Du Z, Zhao H, Kawahara AY, Weller S, Davis DR, Baixeras J, Brown JW, Parr C. Can deliberately incomplete gene sample augmentation improve a phylogeny estimate for the advanced moths and butterflies (Hexapoda: Lepidoptera)? Systematic Biology. 60: 782-96. PMID 21840842 DOI: 10.1093/Sysbio/Syr079  0.329
2010 Johnson JA, Talbot SL, Sage GK, Burnham KK, Brown JW, Maechtle TL, Seegar WS, Yates MA, Anderson B, Mindell DP. The use of genetics for the management of a recovering population: temporal assessment of migratory peregrine falcons in North America. Plos One. 5: e14042. PMID 21124969 DOI: 10.1371/Journal.Pone.0014042  0.571
2010 Brown JW, Sorhannus U. A molecular genetic timescale for the diversification of autotrophic stramenopiles (Ochrophyta): substantive underestimation of putative fossil ages. Plos One. 5. PMID 20862282 DOI: 10.1371/Journal.Pone.0012759  0.406
2010 Qiu YL, Li L, Wang B, Xue JY, Hendry TA, Li RQ, Brown JW, Liu Y, Hudson GT, Chen ZD. Angiosperm phylogeny inferred from sequences of four mitochondrial genes Journal of Systematics and Evolution. 48: 391-425. DOI: 10.1111/J.1759-6831.2010.00097.X  0.412
2009 Howes BJ, Brown JW, Gibbs HL, Herman TB, Mockford SW, Prior KA, Weatherhead PJ. Directional gene flow patterns in disjunct populations of the black ratsnake (Pantheropis obsoletus) and the Blanding's turtle (Emydoidea blandingii) Conservation Genetics. 10: 407-417. DOI: 10.1007/S10592-008-9607-0  0.384
2008 Brown JW, Rest JS, García-Moreno J, Sorenson MD, Mindell DP. Strong mitochondrial DNA support for a Cretaceous origin of modern avian lineages. Bmc Biology. 6: 6. PMID 18226223 DOI: 10.1186/1741-7007-6-6  0.769
2007 Brown JW, Payne RB, Mindell DP. Nuclear DNA does not reconcile 'rocks' and 'clocks' in Neoaves: a comment on Ericson et al. Biology Letters. 3: 257-9; discussion 26. PMID 17389215 DOI: 10.1098/Rsbl.2006.0611  0.536
2007 Brown JW, van Coeverden de Groot PJ, Birt TP, Seutin G, Boag PT, Friesen VL. Appraisal of the consequences of the DDT-induced bottleneck on the level and geographic distribution of neutral genetic variation in Canadian peregrine falcons, Falco peregrinus. Molecular Ecology. 16: 327-43. PMID 17217348 DOI: 10.1111/J.1365-294X.2007.03151.X  0.587
Low-probability matches (unlikely to be authored by this person)
2012 Regier JC, Brown JW, Mitter C, Baixeras J, Cho S, Cummings MP, Zwick A. A molecular phylogeny for the leaf-roller moths (Lepidoptera: Tortricidae) and its implications for classification and life history evolution. Plos One. 7: e35574. PMID 22536410 DOI: 10.1371/Journal.Pone.0035574  0.291
2015 Calixto CP, Waugh R, Brown JW. Evolutionary relationships among barley and Arabidopsis core circadian clock and clock-associated genes. Journal of Molecular Evolution. 80: 108-19. PMID 25608480 DOI: 10.1007/s00239-015-9665-0  0.277
2002 Brown JW, Liang J, Krause N, Akiyama H, Sugisawa H, Fukaya T. Transitions in living arrangements among elders in Japan: does health make a difference? The Journals of Gerontology. Series B, Psychological Sciences and Social Sciences. 57: S209-20. PMID 12084791 DOI: 10.1093/Geronb/57.4.S209  0.267
1999 Brown JW, Boulton ML. Provider attitudes toward dispensing emergency contraception in Michigan's Title X programs Family Planning Perspectives. 31: 39-43. PMID 10029932 DOI: 10.2307/2991556  0.265
2005 Liang J, Brown JW, Krause NM, Ofstedal MB, Bennett J. Health and living arrangements among older Americans: does marriage matter? Journal of Aging and Health. 17: 305-35. PMID 15857961 DOI: 10.1177/0898264305276300  0.265
2022 Paradis E, Claramunt S, Brown J, Schliep K. Confidence intervals in molecular dating by maximum likelihood. Molecular Phylogenetics and Evolution. 107652. PMID 36306994 DOI: 10.1016/j.ympev.2022.107652  0.262
2003 Brown JW, Villarruel AM, Oakley D, Eribes C. Exploring contraceptive pill taking among Hispanic women in the United States. Health Education & Behavior : the Official Publication of the Society For Public Health Education. 30: 663-82. PMID 14655862 DOI: 10.1177/1090198103256743  0.26
2002 Simmons R, Brown J, Díaz M. Facilitating large-scale transitions to quality of care: an idea whose time has come. Studies in Family Planning. 33: 61-75. PMID 11974420 DOI: 10.1111/J.1728-4465.2002.00061.X  0.259
1998 Brown JW, Boulton ML. Dispensation of emergency contraceptive pills in Michigan Title X clinics American Journal of Public Health. 88: 1380-1383. PMID 9736882 DOI: 10.2105/Ajph.88.9.1380  0.246
2011 Brown JW, Segura R, Santiago-Jiménez Q, Rota J, Heard TA. Tortricid moths reared from the invasive weed Mexican palo verde, Parkinsonia aculeata, with comments on their host specificity, biology, geographic distribution, and systematics. Journal of Insect Science (Online). 11: 7. PMID 21521138 DOI: 10.1673/031.011.0107  0.234
2014 Brown JW, Janzen DH, Hallwachs W, Zahiri R, Hajibabaei M, Hebert PDN. Cracking complex taxonomy of Costa Rican moths: Anacrusis zeller (Lepidoptera: Tortricidae: Tortricinae) Journal of the Lepidopterists' Society. 68: 248-263. DOI: 10.18473/Lepi.V68I4.A3  0.232
2013 Brown JW, Janzen DH, Hallwachs W. A food plant specialist in Sparganothini: A new genus and species from Costa Rica (Lepidoptera, Tortricidae). Zookeys. 53-63. PMID 23794903 DOI: 10.3897/Zookeys.303.5230  0.229
2014 Brown JW. Circanota: a new genus of Sparganothini from the Neotropics, and its two new species (Lepidoptera, Tortricidae). Zookeys. 125-34. PMID 25589857 DOI: 10.3897/zookeys.462.7647  0.229
2021 Cormier MJ, Belyeu JR, Pedersen BS, Brown J, Köster J, Quinlan AR. Go Get Data (GGD) is a framework that facilitates reproducible access to genomic data. Nature Communications. 12: 2151. PMID 33846313 DOI: 10.1038/s41467-021-22381-z  0.222
2012 Mayer KF, Waugh R, Brown JW, Schulman A, Langridge P, Platzer M, Fincher GB, Muehlbauer GJ, Sato K, Close TJ, Wise RP, Stein N. A physical, genetic and functional sequence assembly of the barley genome. Nature. 491: 711-6. PMID 23075845 DOI: 10.1038/Nature11543  0.219
2020 Kieser S, Brown J, Zdobnov EM, Trajkovski M, McCue LA. ATLAS: a Snakemake workflow for assembly, annotation, and genomic binning of metagenome sequence data. Bmc Bioinformatics. 21: 257. PMID 32571209 DOI: 10.1186/s12859-020-03585-4  0.214
2012 Marquez Y, Brown JW, Simpson C, Barta A, Kalyna M. Transcriptome survey reveals increased complexity of the alternative splicing landscape in Arabidopsis. Genome Research. 22: 1184-95. PMID 22391557 DOI: 10.1101/gr.134106.111  0.211
2014 Timm AE, Brown JW. Two new combinations in Thaumatotibia Zacher (Lepidoptera: Tortricidae) from Réunion Island, with an updated list of the Afrotropical species African Entomology. 22: 678-680. DOI: 10.4001/003.022.0321  0.203
2014 Brown JW. A new species of amorbia from the mountains of Northwestern Mexico (Lepidoptera: Tortricidae) Proceedings of the Entomological Society of Washington. 116: 373-377. DOI: 10.4289/0013-8797.116.4.373  0.19
2013 Brown JW. Two new neotropical species of platynota with comments on platynota stultana walsingham and platynota xylophaea (meyrick) (lepidoptera: Tortricidae) Proceedings of the Entomological Society of Washington. 115: 128-139. DOI: 10.4289/0013-8797.115.2.128  0.188
2017 Brown J, Pirrung M, McCue LA. FQC Dashboard: integrates FastQC results into a web-based, interactive, and extensible FASTQ quality control tool. Bioinformatics (Oxford, England). PMID 28605449 DOI: 10.1093/bioinformatics/btx373  0.186
2013 Staiger D, Brown JW. Alternative splicing at the intersection of biological timing, development, and stress responses. The Plant Cell. 25: 3640-56. PMID 24179132 DOI: 10.1105/tpc.113.113803  0.185
2019 Brown J, Phillips AR, Lewis DA, Mans MA, Chang Y, Tanguay RL, Peterson ES, Waters KM, Tilton SC. Bioinformatics Resource Manager: a systems biology web tool for microRNA and omics data integration. Bmc Bioinformatics. 20: 255. PMID 31101000 DOI: 10.1186/s12859-019-2805-6  0.185
2012 Syed NH, Kalyna M, Marquez Y, Barta A, Brown JW. Alternative splicing in plants--coming of age. Trends in Plant Science. 17: 616-23. PMID 22743067 DOI: 10.1016/j.tplants.2012.06.001  0.183
2013 Rocca M, Brown JW. New host records for four species of tortricid moths (Lepidoptera: Tortricidae) on cultivated blueberries, vaccinium corymbosum (Ericaceae), in Argentina Proceedings of the Entomological Society of Washington. 115: 167-172. DOI: 10.4289/0013-8797.115.2.167  0.178
2021 Hixson KK, Marques JV, Wendler JP, McDermott JE, Weitz KK, Clauss TR, Monroe ME, Moore RJ, Brown J, Lipton MS, Bell CJ, Paša-Tolić L, Davin LB, Lewis NG. New Insights Into Lignification via Network and Multi-Omics Analyses of Arogenate Dehydratase Knock-Out Mutants in . Frontiers in Plant Science. 12: 664250. PMID 34113365 DOI: 10.3389/fpls.2021.664250  0.174
2017 Becraft ED, Woyke T, Jarett J, Ivanova N, Godoy-Vitorino F, Poulton N, Brown JM, Brown J, Lau MCY, Onstott T, Eisen JA, Moser D, Stepanauskas R. Rokubacteria: Genomic Giants among the Uncultured Bacterial Phyla. Frontiers in Microbiology. 8: 2264. PMID 29234309 DOI: 10.3389/Fmicb.2017.02264  0.173
2014 Brown JW. Review of Aesiocopa Zeller, 1877, with the descriptions of two new species (Tortricidae: Sparganothini) Journal of the Lepidopterists' Society. 68: 1-9.  0.171
2019 Pachiadaki MG, Brown JM, Brown J, Bezuidt O, Berube PM, Biller SJ, Poulton NJ, Burkart MD, La Clair JJ, Chisholm SW, Stepanauskas R. Charting the Complexity of the Marine Microbiome through Single-Cell Genomics. Cell. 179: 1623-1635.e11. PMID 31835036 DOI: 10.1016/J.Cell.2019.11.017  0.17
2015 Brown JW, Bullitt E, Sriswasdi S, Harper S, Speicher DW, McKnight CJ. The Physiological Molecular Shape of Spectrin: A Compact Supercoil Resembling a Chinese Finger Trap. Plos Computational Biology. 11: e1004302. PMID 26067675 DOI: 10.1371/Journal.Pcbi.1004302  0.167
2011 Ahn WY, Krawitz A, Kim W, Busmeyer JR, Brown JW. A Model-Based fMRI Analysis with Hierarchical Bayesian Parameter Estimation. Journal of Neuroscience, Psychology, and Economics. 4: 95-110. PMID 23795233 DOI: 10.1037/A0020684  0.162
2014 Zarr N, Alexander WH, Brown JW. Discounting of reward sequences: a test of competing formal models of hyperbolic discounting. Frontiers in Psychology. 5: 178. PMID 24639662 DOI: 10.3389/Fpsyg.2014.00178  0.157
2014 Anzaldo SS, Dombroskie J, Brown JW. Morphological variation, taxonomic distribution, and phylogenetic significance of cornuti in tortricinae (Lepidoptera: Tortricidae) Proceedings of the Entomological Society of Washington. 116: 1-31. DOI: 10.4289/0013-8797.116.1.1  0.152
2013 Brown JW. A new genus of pine-feeding Cochylina from the western United States and northern Mexico (Lepidoptera: Tortricidae: Euliini). Zootaxa. 3640: 270-83. PMID 26000417 DOI: 10.11646/zootaxa.3640.2.9  0.151
2012 Chan PP, Brown JW, Lowe TM. Modeling the Thermoproteaceae RNase P RNA. Rna Biology. 9: 1155-60. PMID 23018780 DOI: 10.4161/rna.21502  0.145
2012 Kalyna M, Simpson CG, Syed NH, Lewandowska D, Marquez Y, Kusenda B, Marshall J, Fuller J, Cardle L, McNicol J, Dinh HQ, Barta A, Brown JW. Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis. Nucleic Acids Research. 40: 2454-69. PMID 22127866 DOI: 10.1093/nar/gkr932  0.144
2012 Nee DE, Brown JW. Rostral-caudal gradients of abstraction revealed by multi-variate pattern analysis of working memory. Neuroimage. 63: 1285-94. PMID 22992491 DOI: 10.1016/j.neuroimage.2012.08.034  0.143
2012 James AB, Syed NH, Brown JW, Nimmo HG. Thermoplasticity in the plant circadian clock: how plants tell the time-perature. Plant Signaling & Behavior. 7: 1219-23. PMID 22902701 DOI: 10.4161/Psb.21491  0.142
2013 Streitner C, Simpson CG, Shaw P, Danisman S, Brown JW, Staiger D. Small changes in ambient temperature affect alternative splicing in Arabidopsis thaliana. Plant Signaling & Behavior. 8: e24638. PMID 23656882 DOI: 10.4161/psb.24638  0.139
2014 Metzler EH, Brown JW. An updated check list of the Cochylina (Tortricidae, tortricinae, euliini) of North America North of Mexico including greenland, with comments on classification and identification Journal of the Lepidopterists' Society. 68: 274-282.  0.137
2012 Larson E, O'Bra H, Brown JW, Mbengashe T, Klausner JD. Supporting the massive scale-up of antiretroviral therapy: the evolution of PEPFAR-supported treatment facilities in South Africa, 2005-2009. Bmc Public Health. 12: 173. PMID 22404862 DOI: 10.1186/1471-2458-12-173  0.137
2020 Obaidat M, Brown J, Obeidat S, Rawashdeh M. A Hybrid Dynamic Encryption Scheme for Multi-Factor Verification: A Novel Paradigm for Remote Authentication. Sensors (Basel, Switzerland). 20. PMID 32751189 DOI: 10.3390/S20154212  0.134
2017 Stepanauskas R, Fergusson EA, Brown J, Poulton NJ, Tupper B, Labonté JM, Becraft ED, Brown JM, Pachiadaki MG, Povilaitis T, Thompson BP, Mascena CJ, Bellows WK, Lubys A. Improved genome recovery and integrated cell-size analyses of individual uncultured microbial cells and viral particles. Nature Communications. 8: 84. PMID 28729688 DOI: 10.1038/S41467-017-00128-Z  0.133
2015 Brown JW, Simpson CG, Marquez Y, Gadd GM, Barta A, Kalyna M. Lost in Translation: Pitfalls in Deciphering Plant Alternative Splicing Transcripts. The Plant Cell. 27: 2083-7. PMID 26286536 DOI: 10.1105/tpc.15.00572  0.131
2019 Kiu R, Brown J, Bedwell H, Leclaire C, Caim S, Pickard D, Dougan G, Dixon RA, Hall LJ. Genomic analysis on broiler-associated strains and exploratory caecal microbiome investigation reveals key factors linked to poultry necrotic enteritis. Animal Microbiome. 1: 12. PMID 32021965 DOI: 10.1186/s42523-019-0015-1  0.128
2013 Nee DE, Brown JW. Dissociable frontal-striatal and frontal-parietal networks involved in updating hierarchical contexts in working memory. Cerebral Cortex (New York, N.Y. : 1991). 23: 2146-58. PMID 22798339 DOI: 10.1093/cercor/bhs194  0.127
2013 Lewandowska D, ten Have S, Hodge K, Tillemans V, Lamond AI, Brown JW. Plant SILAC: stable-isotope labelling with amino acids of arabidopsis seedlings for quantitative proteomics. Plos One. 8: e72207. PMID 23977254 DOI: 10.1371/journal.pone.0072207  0.127
2015 Alexander WH, Brown JW. Hierarchical Error Representation: A Computational Model of Anterior Cingulate and Dorsolateral Prefrontal Cortex. Neural Computation. 1-57. PMID 26378874 DOI: 10.1162/NECO_a_00779  0.126
2021 Belyeu JR, Chowdhury M, Brown J, Pedersen BS, Cormier MJ, Quinlan AR, Layer RM. Samplot: a platform for structural variant visual validation and automated filtering. Genome Biology. 22: 161. PMID 34034781 DOI: 10.1186/s13059-021-02380-5  0.126
2014 Petrillo E, Godoy Herz MA, Fuchs A, Reifer D, Fuller J, Yanovsky MJ, Simpson C, Brown JW, Barta A, Kalyna M, Kornblihtt AR. A chloroplast retrograde signal regulates nuclear alternative splicing. Science (New York, N.Y.). 344: 427-30. PMID 24763593 DOI: 10.1126/science.1250322  0.125
2021 Belyeu JR, Brand H, Wang H, Zhao X, Pedersen BS, Feusier J, Gupta M, Nicholas TJ, Brown J, Baird L, Devlin B, Sanders SJ, Jorde LB, Talkowski ME, Quinlan AR. De novo structural mutation rates and gamete-of-origin biases revealed through genome sequencing of 2,396 families. American Journal of Human Genetics. PMID 33675682 DOI: 10.1016/j.ajhg.2021.02.012  0.125
2012 James AB, Syed NH, Bordage S, Marshall J, Nimmo GA, Jenkins GI, Herzyk P, Brown JW, Nimmo HG. Alternative splicing mediates responses of the Arabidopsis circadian clock to temperature changes. The Plant Cell. 24: 961-81. PMID 22408072 DOI: 10.1105/Tpc.111.093948  0.124
2014 Brown JW. The tale of the neuroscientists and the computer: why mechanistic theory matters. Frontiers in Neuroscience. 8: 349. PMID 25400544 DOI: 10.3389/fnins.2014.00349  0.12
2013 Grove J, Brown JW, Setel PW. Making the most of common impact metrics: promising approaches that need further study. Bmc Public Health. 13: S8. PMID 23902745 DOI: 10.1186/1471-2458-13-S2-S8  0.12
2010 Taliansky ME, Brown JW, Rajamäki ML, Valkonen JP, Kalinina NO. Involvement of the plant nucleolus in virus and viroid infections: parallels with animal pathosystems. Advances in Virus Research. 77: 119-58. PMID 20951872 DOI: 10.1016/B978-0-12-385034-8.00005-3  0.115
2014 Aryal UK, Callister SJ, McMahon BH, McCue LA, Brown J, Stöckel J, Liberton M, Mishra S, Zhang X, Nicora CD, Angel TE, Koppenaal DW, Smith RD, Pakrasi HB, Sherman LA. Proteomic profiles of five strains of oxygenic photosynthetic cyanobacteria of the genus Cyanothece. Journal of Proteome Research. 13: 3262-76. PMID 24846609 DOI: 10.1021/Pr5000889  0.115
2013 Nee DE, Brown JW, Askren MK, Berman MG, Demiralp E, Krawitz A, Jonides J. A meta-analysis of executive components of working memory. Cerebral Cortex (New York, N.Y. : 1991). 23: 264-82. PMID 22314046 DOI: 10.1093/Cercor/Bhs007  0.112
2014 Timm AE, Brown JW. A new genus of Grapholitini from Africa related to Thaumatotibia (Lepidoptera, Tortricidae). Zookeys. 113-28. PMID 25197220 DOI: 10.3897/zookeys.438.7490  0.11
2014 Nickerson ML, Dancik GM, Im KM, Edwards MG, Turan S, Brown J, Ruiz-Rodriguez C, Owens C, Costello JC, Guo G, Tsang SX, Li Y, Zhou Q, Cai Z, Moore LE, et al. Concurrent alterations in TERT, KDM6A, and the BRCA pathway in bladder cancer. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 20: 4935-48. PMID 25225064 DOI: 10.1158/1078-0432.Ccr-14-0330  0.11
2014 Silvetti M, Alexander W, Verguts T, Brown JW. From conflict management to reward-based decision making: actors and critics in primate medial frontal cortex. Neuroscience and Biobehavioral Reviews. 46: 44-57. PMID 24239852 DOI: 10.1016/J.Neubiorev.2013.11.003  0.108
2015 Schlaen RG, Mancini E, Sanchez SE, Perez-Santángelo S, Rugnone ML, Simpson CG, Brown JW, Zhang X, Chernomoretz A, Yanovsky MJ. The spliceosome assembly factor GEMIN2 attenuates the effects of temperature on alternative splicing and circadian rhythms. Proceedings of the National Academy of Sciences of the United States of America. PMID 26170331 DOI: 10.1073/pnas.1504541112  0.108
2015 Shin KH, Yang SH, Lee JY, Lim CW, Lee SC, Brown JW, Kim SH. Alternative splicing of mini-exons in the Arabidopsis leaf rust receptor-like kinase LRK10 genes affects subcellular localisation. Plant Cell Reports. 34: 495-505. PMID 25510357 DOI: 10.1007/s00299-014-1729-x  0.108
2014 Gilligan TM, Brown JW. A new name for the western spruce budworm (Lepidoptera: Tortricidae)? Canadian Entomologist. 146: 583-589. DOI: 10.4039/tce.2014.17  0.108
2010 Sanchez SE, Petrillo E, Beckwith EJ, Zhang X, Rugnone ML, Hernando CE, Cuevas JC, Godoy Herz MA, Depetris-Chauvin A, Simpson CG, Brown JW, Cerdán PD, Borevitz JO, Mas P, Ceriani MF, et al. A methyl transferase links the circadian clock to the regulation of alternative splicing. Nature. 468: 112-6. PMID 20962777 DOI: 10.1038/Nature09470  0.106
2011 Brown JW. Medial prefrontal cortex activity correlates with time-on-task: what does this tell us about theories of cognitive control? Neuroimage. 57: 314-5. PMID 21540116 DOI: 10.1016/j.neuroimage.2011.04.028  0.106
2010 Lai LB, Chan PP, Cozen AE, Bernick DL, Brown JW, Gopalan V, Lowe TM. Discovery of a minimal form of RNase P in Pyrobaculum. Proceedings of the National Academy of Sciences of the United States of America. 107: 22493-8. PMID 21135215 DOI: 10.1073/Pnas.1013969107  0.104
2017 Jiang X, Bomgarden R, Brown J, Drew DL, Robitaille AM, Viner R, Huhmer AR. Sensitive and accurate quantitation of phosphopeptides using TMT isobaric labeling technique. Journal of Proteome Research. PMID 29022350 DOI: 10.1021/acs.jproteome.7b00610  0.103
2019 Vera-Gargallo B, Chowdhury TR, Brown J, Fansler SJ, Durán-Viseras A, Sánchez-Porro C, Bailey VL, Jansson JK, Ventosa A. Spatial distribution of prokaryotic communities in hypersaline soils. Scientific Reports. 9: 1769. PMID 30741985 DOI: 10.1038/S41598-018-38339-Z  0.103
2020 Brown JM, Labonté JM, Brown J, Record NR, Poulton NJ, Sieracki ME, Logares R, Stepanauskas R. Single Cell Genomics Reveals Viruses Consumed by Marine Protists. Frontiers in Microbiology. 11: 524828. PMID 33072003 DOI: 10.3389/fmicb.2020.524828  0.103
2014 Brown JW. Two new combinations in neotropical eccopsis zeller, 1852 and one in Megalota Diakonoff, 1966 (Tortricidae: Olethruetinae) Journal of the Lepidopterists' Society. 68: 287-289.  0.103
2022 RoyChowdhury T, Bramer LM, Brown J, Kim YM, Zink E, Metz TO, McCue LA, Diefenderfer HL, Bailey V. Soil Metabolomics Predict Microbial Taxa as Biomarkers of Moisture Status in Soils from a Tidal Wetland. Microorganisms. 10. PMID 36014071 DOI: 10.3390/microorganisms10081653  0.103
2010 Krawitz A, Fukunaga R, Brown JW. Anterior insula activity predicts the influence of positively framed messages on decision making. Cognitive, Affective & Behavioral Neuroscience. 10: 392-405. PMID 20805540 DOI: 10.3758/CABN.10.3.392  0.103
2014 Nee DE, Jahn A, Brown JW. Prefrontal cortex organization: dissociating effects of temporal abstraction, relational abstraction, and integration with FMRI. Cerebral Cortex (New York, N.Y. : 1991). 24: 2377-87. PMID 23563962 DOI: 10.1093/Cercor/Bht091  0.102
2012 Jones MA, Williams BA, McNicol J, Simpson CG, Brown JW, Harmer SL. Mutation of Arabidopsis spliceosomal timekeeper locus1 causes circadian clock defects. The Plant Cell. 24: 4066-82. PMID 23110899 DOI: 10.1105/Tpc.112.104828  0.102
2017 Stepanauskas R, Fergusson EA, Brown J, Poulton NJ, Tupper B, Labonté JM, Becraft ED, Brown JM, Pachiadaki MG, Povilaitis T, Thompson BP, Mascena CJ, Bellows WK, Lubys A. Author Correction: Improved genome recovery and integrated cell-size analyses of individual uncultured microbial cells and viral particles. Nature Communications. 8: 2134. PMID 29233980 DOI: 10.1038/S41467-017-02128-5  0.101
2013 Zhbannikov IY, Brown JW, Foster JA. DecisivatoR: An R infrastructure package that addresses the problem of phylogenetic decisiveness 2013 Acm Conference On Bioinformatics, Computational Biology and Biomedical Informatics, Acm-Bcb 2013. 716-717. DOI: 10.1145/2506583.2512383  0.099
2014 Simpson CG, Lewandowska D, Liney M, Davidson D, Chapman S, Fuller J, McNicol J, Shaw P, Brown JW. Arabidopsis PTB1 and PTB2 proteins negatively regulate splicing of a mini-exon splicing reporter and affect alternative splicing of endogenous genes differentially. The New Phytologist. 203: 424-36. PMID 24749484 DOI: 10.1111/nph.12821  0.098
2013 Brown JW. Beyond conflict monitoring: Cognitive control and the neural basis of thinking before you act. Current Directions in Psychological Science. 22: 179-185. PMID 25360064 DOI: 10.1177/0963721412470685  0.097
2012 Streitner C, Köster T, Simpson CG, Shaw P, Danisman S, Brown JW, Staiger D. An hnRNP-like RNA-binding protein affects alternative splicing by in vivo interaction with transcripts in Arabidopsis thaliana. Nucleic Acids Research. 40: 11240-55. PMID 23042250 DOI: 10.1093/nar/gks873  0.097
2015 Gillette R, Brown JW. The Sea Slug, Pleurobranchaea californica: A Signpost Species in the Evolution of Complex Nervous Systems and Behavior. Integrative and Comparative Biology. PMID 26163678 DOI: 10.1093/Icb/Icv081  0.097
2014 Jahn A, Nee DE, Alexander WH, Brown JW. Distinct regions of anterior cingulate cortex signal prediction and outcome evaluation. Neuroimage. 95: 80-9. PMID 24667454 DOI: 10.1016/J.Neuroimage.2014.03.050  0.094
2019 Kay S, Edwards J, Brown J, Dixon R. Infection Model Identifies Both High and Low Lethality of Toxigenic Strains and Their Response to Antimicrobials. Frontiers in Microbiology. 10: 1281. PMID 31333591 DOI: 10.3389/fmicb.2019.01281  0.093
2015 Vélez de Mendizábal N, Jones DR, Jahn A, Bies RR, Brown JW. Nicotine and cotinine exposure from electronic cigarettes: a population approach. Clinical Pharmacokinetics. 54: 615-26. PMID 25503588 DOI: 10.1007/s40262-014-0221-7  0.093
2012 Hirayama K, Catanho M, Brown JW, Gillette R. A core circuit module for cost/benefit decision. Frontiers in Neuroscience. 6: 123. PMID 22969700 DOI: 10.3389/Fnins.2012.00123  0.093
2014 Alexander WH, Brown JW. A general role for medial prefrontal cortex in event prediction. Frontiers in Computational Neuroscience. 8: 69. PMID 25071539 DOI: 10.3389/fncom.2014.00069  0.091
2015 Alexander WH, Fukunaga R, Finn P, Brown JW. Reward salience and risk aversion underlie differential ACC activity in substance dependence. Neuroimage. Clinical. 8: 59-71. PMID 26106528 DOI: 10.1016/J.Nicl.2015.02.025  0.09
2021 Tian Y, Wu L, Lu R, Bao H, Zhou Y, Pang M, Brown J, Wang J, Wang R, Zhang H. Virulent phage vB_CpeP_HN02 inhibits Clostridium perfringens on the surface of the chicken meat. International Journal of Food Microbiology. 363: 109514. PMID 34999475 DOI: 10.1016/j.ijfoodmicro.2021.109514  0.088
2015 Zarr N, Brown JW. Hierarchical error representation in medial prefrontal cortex. Neuroimage. 124: 238-247. PMID 26343320 DOI: 10.1016/J.Neuroimage.2015.08.063  0.087
2010 Alexander WH, Brown JW. Computational models of performance monitoring and cognitive control. Topics in Cognitive Science. 2: 658-77. PMID 21359126 DOI: 10.1111/j.1756-8765.2010.01085.x  0.084
2014 Raczynska KD, Stepien A, Kierzkowski D, Kalak M, Bajczyk M, McNicol J, Simpson CG, Szweykowska-Kulinska Z, Brown JW, Jarmolowski A. The SERRATE protein is involved in alternative splicing in Arabidopsis thaliana. Nucleic Acids Research. 42: 1224-44. PMID 24137006 DOI: 10.1093/nar/gkt894  0.084
2011 Alexander WH, Brown JW. Medial prefrontal cortex as an action-outcome predictor. Nature Neuroscience. 14: 1338-44. PMID 21926982 DOI: 10.1038/nn.2921  0.083
2015 Alexander WH, Brown JW. Reciprocal interactions of computational modeling and empirical investigation An Introduction to Model-Based Cognitive Neuroscience. 321-338. DOI: 10.1007/978-1-4939-2236-9_16  0.083
2016 Akaishi R, Kolling N, Brown JW, Rushworth M. Neural Mechanisms of Credit Assignment in a Multicue Environment. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 36: 1096-112. PMID 26818500 DOI: 10.1523/Jneurosci.3159-15.2016  0.081
2015 Brown J. What's in Your Satchel? Things Best Not Forgotten: Reflections on a Year in Peru. The Journal of Emergency Medicine. 49: 85-6. PMID 25869141 DOI: 10.1016/j.jemermed.2015.02.021  0.081
2012 Fukunaga R, Brown JW, Bogg T. Decision making in the Balloon Analogue Risk Task (BART): anterior cingulate cortex signals loss aversion but not the infrequency of risky choices. Cognitive, Affective & Behavioral Neuroscience. 12: 479-90. PMID 22707378 DOI: 10.3758/S13415-012-0127-5  0.078
2011 Nee DE, Kastner S, Brown JW. Functional heterogeneity of conflict, error, task-switching, and unexpectedness effects within medial prefrontal cortex. Neuroimage. 54: 528-40. PMID 20728547 DOI: 10.1016/j.neuroimage.2010.08.027  0.078
2015 Kopylev L, Christensen KY, Brown JW, Cooper GS. Authors' response: A systematic review of the association between pleural plaques and changes in lung function. Occupational and Environmental Medicine. 72: 685-6. PMID 26203101 DOI: 10.1136/Oemed-2015-103063  0.077
2013 Fukunaga R, Bogg T, Finn PR, Brown JW. Decisions during negatively-framed messages yield smaller risk-aversion-related brain activation in substance-dependent individuals. Psychology of Addictive Behaviors : Journal of the Society of Psychologists in Addictive Behaviors. 27: 1141-52. PMID 23148798 DOI: 10.1037/A0030633  0.077
2014 Brown JW, Rueter LE, Zhang M. Predictive validity of a MK-801-induced cognitive impairment model in mice: implications on the potential limitations and challenges of modeling cognitive impairment associated with schizophrenia preclinically. Progress in Neuro-Psychopharmacology & Biological Psychiatry. 49: 53-62. PMID 24269664 DOI: 10.1016/j.pnpbp.2013.11.008  0.077
2014 Brown JW, Copeland RS, Aarvik L, Miller SE, Rosati ME, Luke Q. Host records for fruit-feeding afrotropical tortricidae (Lepidoptera) African Entomology. 22: 343-376. DOI: 10.4001/003.022.0225  0.076
2011 Forster SE, Brown JW. Medial prefrontal cortex predicts and evaluates the timing of action outcomes. Neuroimage. 55: 253-65. PMID 21094259 DOI: 10.1016/j.neuroimage.2010.11.035  0.076
2011 Krawitz A, Braver TS, Barch DM, Brown JW. Impaired error-likelihood prediction in medial prefrontal cortex in schizophrenia. Neuroimage. 54: 1506-17. PMID 20851194 DOI: 10.1016/j.neuroimage.2010.09.027  0.075
2012 Bogg T, Fukunaga R, Finn PR, Brown JW. Cognitive control links alcohol use, trait disinhibition, and reduced cognitive capacity: Evidence for medial prefrontal cortex dysregulation during reward-seeking behavior. Drug and Alcohol Dependence. 122: 112-8. PMID 21992873 DOI: 10.1016/J.Drugalcdep.2011.09.018  0.074
2021 Yurgel SN, Qu Y, Rice J, Ajeethan N, Zink E, Brown J, Purvine S, Lipton M, Kahn M. Specialization in a nitrogen-fixing symbiosis: proteome differences between Sinorhizobium medicae bacteria and bacteroids. Molecular Plant-Microbe Interactions : Mpmi. PMID 34402628 DOI: 10.1094/MPMI-07-21-0180-R  0.071
2015 Brown JW, Moeller A, Schmidt M, Turner SC, Nimmrich V, Ma J, Rueter LE, van der Kam E, Zhang M. Anticonvulsant effects of structurally diverse GABAB positive allosteric modulators in the DBA/2J audiogenic seizure test: Comparison to baclofen and utility as a pharmacodynamic screening model. Neuropharmacology. 101: 358-369. PMID 26471422 DOI: 10.1016/J.Neuropharm.2015.10.009  0.069
2013 Brown JW, Chen Sl, Smith P. Evaluating a Community-Based Family Caregiver Training Program Home Health Care Management and Practice. 25: 76-83. DOI: 10.1177/1084822312468136  0.067
2013 Adamski D, Makinson JR, Brown BT, Wright SA, Pratt PD, Brown JW. Description and evaluation of Metharmostis multilineata (Cosmopterigidae) and Idiophantis soreuta (Gelechiidae) (Lepidoptera: Gelechioidea) for biocontrol of downy rose myrtle, Rhodomyrtus tomentosa (Myrtaceae) Journal of the Lepidopterists' Society. 67: 111-127.  0.065
2011 Jahn A, Nee DE, Brown JW. The neural basis of predicting the outcomes of imagined actions. Frontiers in Neuroscience. 5: 128. PMID 22131965 DOI: 10.3389/Fnins.2011.00128  0.065
2013 Brown JW, Coles AJ. Alemtuzumab: evidence for its potential in relapsing-remitting multiple sclerosis. Drug Design, Development and Therapy. 7: 131-8. PMID 23494602 DOI: 10.2147/DDDT.S32687  0.065
2012 Brown J, Sobsey MD. Boiling as household water treatment in Cambodia: a longitudinal study of boiling practice and microbiological effectiveness. The American Journal of Tropical Medicine and Hygiene. 87: 394-8. PMID 22826487 DOI: 10.4269/Ajtmh.2012.11-0715  0.065
2009 Brown J, Shah P, Stanton T, Marwick TH. Interaction and prognostic effects of left ventricular diastolic dysfunction and patient-prosthesis mismatch as determinants of outcome after isolated aortic valve replacement. The American Journal of Cardiology. 104: 707-12. PMID 19699349 DOI: 10.1016/j.amjcard.2009.04.035  0.064
2012 Gammie JS, Brown JW, Crunkleton JA, Bittle GJ, Stauffer CE, Liepert AG, Ghoreishi M. An automated coring and apical connector insertion device facilitates aortic valve bypass (apicoaortic conduit) surgery: preclinical experience in a chronic ovine model. The Journal of Heart Valve Disease. 21: 494-501. PMID 22953677  0.064
2010 Brown J, Wallet MA, Krastins B, Sarracino D, Goodenow MM. Proteome bioprofiles distinguish between M1 priming and activation states in human macrophages. Journal of Leukocyte Biology. 87: 655-62. PMID 20007246 DOI: 10.1189/Jlb.0809570  0.063
2011 Larson E, O'Bra H, Brown JW, Goldman T, Pillay Y, Klausner JD. Equitable distribution of PEPFAR-supported HIV/AIDS services in South Africa. American Journal of Public Health. 101: 1349-51; author repl. PMID 21680922 DOI: 10.2105/AJPH.2011.300242  0.063
2013 Cox EG, Knoderer CA, Jennings A, Brown JW, Rodefeld MD, Walker SG, Turrentine MW. A Randomized, Controlled Trial of Catheter-Related Infectious Event Rates Using Antibiotic-Impregnated Catheters Versus Conventional Catheters in Pediatric Cardiovascular Surgery Patients. Journal of the Pediatric Infectious Diseases Society. 2: 67-70. PMID 26619445 DOI: 10.1093/jpids/pis066  0.062
2013 Brown JW, Coles AJ, Jones JL. First use of alemtuzumab in Balo's concentric sclerosis: a case report. Multiple Sclerosis (Houndmills, Basingstoke, England). 19: 1673-5. PMID 23886830 DOI: 10.1177/1352458513498129  0.06
2014 Mitsche MA, Packer LE, Brown JW, Jiang ZG, Small DM, McKnight CJ. Surface tensiometry of apolipoprotein B domains at lipid interfaces suggests a new model for the initial steps in triglyceride-rich lipoprotein assembly. The Journal of Biological Chemistry. 289: 9000-12. PMID 24515109 DOI: 10.1074/jbc.M113.540955  0.059
2014 Pillai MM, Gillen AE, Yamamoto TM, Kline E, Brown J, Flory K, Hesselberth JR, Kabos P. HITS-CLIP reveals key regulators of nuclear receptor signaling in breast cancer. Breast Cancer Research and Treatment. 146: 85-97. PMID 24906430 DOI: 10.1007/S10549-014-3004-9  0.059
2013 Brown JW, Whitehead CA, Basso AM, Rueter LE, Zhang M. Preclinical evaluation of non-imidazole histamine H3 receptor antagonists in comparison to atypical antipsychotics for the treatment of cognitive deficits associated with schizophrenia. The International Journal of Neuropsychopharmacology / Official Scientific Journal of the Collegium Internationale Neuropsychopharmacologicum (Cinp). 16: 889-904. PMID 22906530 DOI: 10.1017/S1461145712000739  0.059
2015 Zhang R, Calixto CP, Tzioutziou NA, James AB, Simpson CG, Guo W, Marquez Y, Kalyna M, Patro R, Eyras E, Barta A, Nimmo HG, Brown JW. AtRTD - a comprehensive reference transcript dataset resource for accurate quantification of transcript-specific expression in Arabidopsis thaliana. The New Phytologist. PMID 26111100 DOI: 10.1111/Nph.13545  0.059
2016 Rodriguez MJ, Brown J, Giordano J, Lin SJ, Omenetto FG, Kaplan DL. Silk based bioinks for soft tissue reconstruction using 3-dimensional (3D) printing with in vitro and in vivo assessments. Biomaterials. 117: 105-115. PMID 27940389 DOI: 10.1016/J.Biomaterials.2016.11.046  0.059
2019 Roy Chowdhury T, Lee JY, Bottos EM, Brislawn CJ, White RA, Bramer LM, Brown J, Zucker JD, Kim YM, Jumpponen A, Rice CW, Fansler SJ, Metz TO, McCue LA, Callister SJ, et al. Metaphenomic Responses of a Native Prairie Soil Microbiome to Moisture Perturbations. Msystems. 4. PMID 31186334 DOI: 10.1128/mSystems.00061-19  0.058
2003 Rosen LS, Brown J, Laxa B, Boulos L, Reiswig L, Henner WD, Lum RT, Schow SR, Maack CA, Keck JG, Mascavage JC, Dombroski JA, Gomez RF, Brown GL. Phase I study of TLK286 (glutathione S-transferase P1-1 activated glutathione analogue) in advanced refractory solid malignancies. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 9: 1628-38. PMID 12738715  0.057
2011 Rakitina DV, Taliansky M, Brown JW, Kalinina NO. Two RNA-binding sites in plant fibrillarin provide interactions with various RNA substrates. Nucleic Acids Research. 39: 8869-80. PMID 21785141 DOI: 10.1093/nar/gkr594  0.056
2014 Smittkamp SE, Spalding HN, Brown JW, Yeh HW, Stanford JA. Relationships between tongue motility, grip force, and survival in SOD1-G93A rats. Physiology & Behavior. 125: 17-20. PMID 24291387 DOI: 10.1016/j.physbeh.2013.11.010  0.056
2011 Fiore AC, Brown JW, Turrentine MW, Ruzmetov M, Huynh D, Hanley S, Rodefeld MD. A bovine jugular vein conduit: a ten-year bi-institutional experience. The Annals of Thoracic Surgery. 92: 183-90; discussion 1. PMID 21549348 DOI: 10.1016/j.athoracsur.2011.02.073  0.055
2015 Brown JW, Nguyen QT, Otto T, Jarenwattananon NN, Glöggler S, Bouchard LS. Epoxidation of alkenes with molecular oxygen catalyzed by a manganese porphyrin-based metal-organic framework Catalysis Communications. 59: 50-54. DOI: 10.1016/j.catcom.2014.09.040  0.053
2007 Picano E, Pasanisi E, Brown J, Marwick TH. A gatekeeper for the gatekeeper: inappropriate referrals to stress echocardiography. American Heart Journal. 154: 285-90. PMID 17643578 DOI: 10.1016/j.ahj.2007.04.032  0.053
2014 Balakrishnan I, Yang X, Brown J, Ramakrishnan A, Torok-Storb B, Kabos P, Hesselberth JR, Pillai MM. Genome-wide analysis of miRNA-mRNA interactions in marrow stromal cells. Stem Cells (Dayton, Ohio). 32: 662-73. PMID 24038734 DOI: 10.1002/Stem.1531  0.052
2020 Brown J, Johnson J, Ozan-Rafferty ME, Sharma M, Barbera S. Internet Narratives Focused on Health Travelers' Experiences in India: Qualitative Analysis. Journal of Medical Internet Research. 22: e15665. PMID 32406860 DOI: 10.2196/15665  0.052
2012 Gallego KR, Lerma JM, Echeverri CG, Brown JW. Description of the early stages of eccopsis galapagana razowski & landry (Tortricidae), a Defoliator of prosopis Juliflora (SW.) DC. (Fabaceae) in Colombia Journal of the Lepidopterists' Society. 66: 156-164.  0.052
2014 Fiore AC, Tan C, Armbrecht E, Huddleston CB, Kim E, Goel N, McCartney C, Patel P, Brown JW. Comparison of fenestrated and nonfenestrated patients undergoing extracardiac Fontan. The Annals of Thoracic Surgery. 97: 924-31; discussion 9. PMID 24495416 DOI: 10.1016/J.Athoracsur.2013.11.041  0.05
2019 Bridge AD, Brown J, Snider H, Ward WE, Roy BD, Josse AR. Consumption of Greek Yogurt During 12 Weeks of High-impact, Loading Exercise Increases Bone Formation in Young, Adult Males - A Secondary Analysis from a Randomized Trial. Applied Physiology, Nutrition, and Metabolism = Physiologie Appliquee, Nutrition Et Metabolisme. PMID 31652407 DOI: 10.1139/apnm-2019-0396  0.05
2020 Brown J. Observations on Odontalgia, with Dr. Brown's Explanation of an Apparatus That Has Been Employed in Relieving It. The Medical and Physical Journal. 3: 403-407. PMID 30490247  0.049
2021 Schofield AL, Brown JP, Brown J, Wilczynska A, Bell C, Glaab WE, Hackl M, Howell L, Lee S, Dear JW, Remes M, Reeves P, Zhang E, Allmer J, Norris A, et al. Systems analysis of miRNA biomarkers to inform drug safety. Archives of Toxicology. PMID 34510227 DOI: 10.1007/s00204-021-03150-9  0.048
2014 Brown JW. Eleventh annual George Daicoff lecture: pediatric cardiac surgery: it's a wonderful life. Cardiology in the Young. 24: 1150-3. PMID 25647392 DOI: 10.1017/S1047951114001917  0.047
2009 Marwick TH, Leano RL, Brown J, Sun JP, Hoffmann R, Lysyansky P, Becker M, Thomas JD. Myocardial strain measurement with 2-dimensional speckle-tracking echocardiography: definition of normal range. Jacc. Cardiovascular Imaging. 2: 80-4. PMID 19356538 DOI: 10.1016/j.jcmg.2007.12.007  0.047
2011 Gramer MJ, Eckblad JJ, Donahue R, Brown J, Shultz C, Vickerman K, Priem P, van den Bremer ETJ, Gerritsen J, van Berkel PHC. Modulation of antibody galactosylation through feeding of uridine, manganese chloride, and galactose Biotechnology and Bioengineering. 108: 1591-1602. PMID 21328321 DOI: 10.1002/bit.23075  0.046
2013 Brown JW, Patel PM, Rodefeld MD, Turrentine MW. The Ross operation in adolescents. World Journal For Pediatric & Congenital Heart Surgery. 4: 403-11. PMID 24327635 DOI: 10.1177/2150135113505295  0.046
2015 Pachalska M, Góral-Półrola J, Brown JW, MacQueen BD. Consciousness and reality: A neuropsychological perspective Acta Neuropsychologica. 13: 205-227. DOI: 10.5604/17307503.1169396  0.046
2014 Bardou F, Ariel F, Simpson CG, Romero-Barrios N, Laporte P, Balzergue S, Brown JW, Crespi M. Long noncoding RNA modulates alternative splicing regulators in Arabidopsis. Developmental Cell. 30: 166-76. PMID 25073154 DOI: 10.1016/j.devcel.2014.06.017  0.046
2012 Brown JW, Farelli JD, McKnight CJ. On the unyielding hydrophobic core of villin headpiece. Protein Science : a Publication of the Protein Society. 21: 647-54. PMID 22467489 DOI: 10.1002/Pro.2048  0.043
2015 Brown JW, Lawn ND, Lee J, Dunne JW. When is it safe to return to driving following first-ever seizure? Journal of Neurology, Neurosurgery, and Psychiatry. 86: 60-4. PMID 24769470 DOI: 10.1136/jnnp-2013-307529  0.042
2004 Clasen TF, Brown J, Collin S, Suntura O, Cairncross S. Reducing diarrhea through the use of household-based ceramic water filters: a randomized, controlled trial in rural Bolivia. The American Journal of Tropical Medicine and Hygiene. 70: 651-7. PMID 15211008  0.042
2022 Lentz B, Kharasch S, Goldsmith AJ, Brown J, Duggan NM, Nagdev A. Diaphragmatic Excursion as a Novel Objective Measure of Serratus Anterior Plane Block Efficacy: A Case Series. Clinical Practice and Cases in Emergency Medicine. 6: 276-279. PMID 36427038 DOI: 10.5811/cpcem.2022.7.57457  0.042
2011 Creel AH, Rimal RN, Mkandawire G, Böse K, Brown JW. Effects of a mass media intervention on HIV-related stigma: 'Radio Diaries' program in Malawi. Health Education Research. 26: 456-65. PMID 21393376 DOI: 10.1093/Her/Cyr012  0.041
2013 Poynter JA, Eghtesady P, McCrindle BW, Walters HL, Kirshbom PM, Blackstone EH, Husain SA, Overman DM, Austin EH, Karamlou T, Lodge AJ, St Louis JD, Gruber PJ, Ziemer G, Davies RR, ... ... Brown JW, et al. Association of pulmonary conduit type and size with durability in infants and young children. The Annals of Thoracic Surgery. 96: 1695-701; discussion. PMID 23972424 DOI: 10.1016/j.athoracsur.2013.05.074  0.04
2013 Brown JW, Henderson BL, Kiesz MD, Whalley AC, Morris W, Grunder S, Deng H, Furukawa H, Zink JI, Stoddart JF, Yaghi OM. Photophysical pore control in an azobenzene-containing metal-organic framework Chemical Science. 4: 2858-2864. DOI: 10.1039/C3Sc21659D  0.04
2015 Brown JW, Jarenwattananon NN, Otto T, Wang JL, Glöggler S, Bouchard LS. Heterogeneous heck coupling in multivariate metal-organic frameworks for enhanced selectivity Catalysis Communications. 65: 105-107. DOI: 10.1016/j.catcom.2015.03.005  0.04
2006 Clasen TF, Brown J, Collin SM. Preventing diarrhoea with household ceramic water filters: assessment of a pilot project in Bolivia. International Journal of Environmental Health Research. 16: 231-9. PMID 16611567 DOI: 10.1080/09603120600641474  0.039
2011 Klausner JD, Serenata C, O'Bra H, Mattson CL, Brown JW, Wilson M, Mbengashe T, Goldman TM. Scale-up and continuation of antiretroviral therapy in South African treatment programs, 2005-2009. Journal of Acquired Immune Deficiency Syndromes (1999). 56: 292-5. PMID 21317587 DOI: 10.1097/QAI.0b013e3182067d99  0.039
2015 Kini P, Wong J, McInnis S, Gabana N, Brown JW. The effects of gratitude expression on neural activity. Neuroimage. PMID 26746580 DOI: 10.1016/j.neuroimage.2015.12.040  0.038
2019 Bridge A, Brown J, Snider H, Nasato M, Ward WE, Roy BD, Josse AR. Greek Yogurt and 12 Weeks of Exercise Training on Strength, Muscle Thickness and Body Composition in Lean, Untrained, University-Aged Males. Frontiers in Nutrition. 6: 55. PMID 31114790 DOI: 10.3389/fnut.2019.00055  0.038
2012 Loke YK, Brown JW, Kwok CS, Niruban A, Myint PK. Association of obstructive sleep apnea with risk of serious cardiovascular events: a systematic review and meta-analysis. Circulation. Cardiovascular Quality and Outcomes. 5: 720-8. PMID 22828826 DOI: 10.1161/CIRCOUTCOMES.111.964783  0.037
2011 Brown JW, Fehrenbacher JW, Ruzmetov M, Shahriari A, Miller J, Turrentine MW. Ross root dilation in adult patients: is preoperative aortic insufficiency associated with increased late autograft reoperation? The Annals of Thoracic Surgery. 92: 74-81; discussion 81. PMID 21620370 DOI: 10.1016/j.athoracsur.2011.02.012  0.036
2012 Brown JW, Fiore AC, Ruzmetov M, Eltayeb O, Rodefeld MD, Turrentine MW. Evolution of mitral valve replacement in children: a 40-year experience. The Annals of Thoracic Surgery. 93: 626-33; discussion 6. PMID 22153051 DOI: 10.1016/j.athoracsur.2011.08.085  0.036
2015 Brown J. Adverse events do not happen by accident. Biomedical Instrumentation & Technology / Association For the Advancement of Medical Instrumentation. 49: 224. PMID 25993586 DOI: 10.2345/0899-8205-49.3.224  0.036
2020 Humphrey JH, Brown J, Cumming O, Evans B, Howard G, Kulabako RN, Lamontagne J, Pickering AJ, Wang EN. The potential for atmospheric water harvesting to accelerate household access to safe water. The Lancet. Planetary Health. 4: e91-e92. PMID 32220676 DOI: 10.1016/S2542-5196(20)30034-6  0.035
2015 Brown J, Lu CL, Coburn J, Kaplan DL. Impact of silk biomaterial structure on proteolysis. Acta Biomaterialia. 11: 212-21. PMID 25240984 DOI: 10.1016/J.Actbio.2014.09.013  0.034
2014 Brown JW, Martin PJ, Thorpe JW, Michell AW, Coles AJ, Cox AL, Vincent A, Zandi MS. Long-term remission with rituximab in refractory leucine-rich glioma inactivated 1 antibody encephalitis. Journal of Neuroimmunology. 271: 66-8. PMID 24703099 DOI: 10.1016/J.Jneuroim.2014.03.012  0.034
2015 Young JH, Logan BR, Wu J, Wingard JR, Weisdorf DJ, Mudrick C, Knust K, Horowitz MM, Confer DL, Dubberke ER, Pergam SA, Marty FM, Strasfeld LM, Brown JW, Langston AA, et al. Infections following Transplantation of Bone Marrow or Peripheral-Blood Stem Cells from Unrelated Donors. Biology of Blood and Marrow Transplantation : Journal of the American Society For Blood and Marrow Transplantation. PMID 26409243 DOI: 10.1016/J.Bbmt.2015.09.013  0.034
2011 Brown JW, Farelli JD, McKnight CJ. On unsatisfied hydrogen bonds in the N-terminal subdomain of villin headpiece. Journal of Molecular Biology. 413: 543-7. PMID 21903098 DOI: 10.1016/J.Jmb.2011.08.024  0.031
2011 Brown JW. Health as expanding consciousness: a nursing perspective for grounded theory research. Nursing Science Quarterly. 24: 197-201. PMID 21742707 DOI: 10.1177/0894318411409428  0.031
2009 Brown J, Jenkins C, Marwick TH. Use of myocardial strain to assess global left ventricular function: a comparison with cardiac magnetic resonance and 3-dimensional echocardiography. American Heart Journal. 157: 102.e1-5. PMID 19081404 DOI: 10.1016/j.ahj.2008.08.032  0.03
2011 Brown JW, Ruzmetov M, Rodefeld MD, Eltayeb O, Yurdakok O, Turrentine MW. Contegra versus pulmonary homografts for right ventricular outflow tract reconstruction: a ten-year single-institution comparison. World Journal For Pediatric & Congenital Heart Surgery. 2: 541-9. PMID 23804465 DOI: 10.1177/2150135111415711  0.03
2012 Adams C, Guo LR, Jones PM, Harle C, Brown JW, Gammie JS, Kiaii B. Automated coring and apical connector insertion device for aortic valve bypass surgery. The Annals of Thoracic Surgery. 93: 290-3. PMID 22186447 DOI: 10.1016/j.athoracsur.2011.08.063  0.03
2024 Goldsmith AJ, Brown J, Duggan NM, Finkelberg T, Jowkar N, Stegeman J, Riscinti M, Nagdev A, Amini R. Ultrasound-guided nerve blocks in emergency medicine practice: 2022 updates. The American Journal of Emergency Medicine. 78: 112-119. PMID 38244244 DOI: 10.1016/j.ajem.2023.12.043  0.029
2014 Core C, Brown JW, Larsen MD, Mahshie J. Assessing speech perception in children with cochlear implants using a modified hybrid visual habituation procedure. Ear and Hearing. 35: 555-64. PMID 25072237 DOI: 10.1097/Aud.0000000000000049  0.028
2012 Patel SD, Larson E, Mbengashe T, O'Bra H, Brown JW, Golman TM, Klausner JD. Increases in pediatric antiretroviral treatment, South Africa 2005-2010. Plos One. 7: e44914. PMID 23028677 DOI: 10.1371/journal.pone.0044914  0.027
2012 Dworkis DA, Brown SS, Gaeta JM, Brown JW, Gonzalez MH. Barriers to outpatient respiratory therapy among adult residents of emergency shelters. Annals of Internal Medicine. 157: 679-80. PMID 23128875 DOI: 10.7326/0003-4819-157-9-201211060-00025  0.027
2012 Brown JW, Rodefeld MD, Ruzmetov M, Eltayeb O, Yurdakok O, Turrentine MW. Surgical valvuloplasty versus balloon aortic dilation for congenital aortic stenosis: are evidence-based outcomes relevant? The Annals of Thoracic Surgery. 94: 146-53; discussion 1. PMID 22537535 DOI: 10.1016/j.athoracsur.2012.02.054  0.025
2014 Ranjan N, Fulcrand G, King A, Brown J, Jiang X, Leng F, Arya DP. Selective Inhibition of Bacterial Topoisomerase I by alkynyl-bisbenzimidazoles. Medchemcomm. 5: 816-825. PMID 25083189 DOI: 10.1039/C4Md00140K  0.025
2015 Ramamoorthy A, Brown JW. Performance Monitoring Brain Mapping: An Encyclopedic Reference. 3: 355-359. DOI: 10.1016/B978-0-12-397025-1.00254-2  0.024
2023 Brown J, Perry CGR, Prior T, Phillips SM, Skelly LE, Josse AR. Differential plasma branched-chain amino acid responses following the consumption of Greek-style yogurt and skimmed milk. Applied Physiology, Nutrition, and Metabolism = Physiologie Appliquee, Nutrition Et Metabolisme. PMID 36989535 DOI: 10.1139/apnm-2022-0416  0.024
2011 Kesler KA, Kruter LE, Perkins SM, Rieger KM, Sullivan KJ, Runyan ML, Brown JW, Einhorn LH. Survival after resection for metastatic testicular nonseminomatous germ cell cancer to the lung or mediastinum. The Annals of Thoracic Surgery. 91: 1085-93; discussion . PMID 21440128 DOI: 10.1016/J.Athoracsur.2010.12.034  0.023
2011 Brown JW, Ruzmetov M, Huynh D, Rodefeld MD, Turrentine MW, Fiore AC. Rastelli operation for transposition of the great arteries with ventricular septal defect and pulmonary stenosis. The Annals of Thoracic Surgery. 91: 188-93; discussion 1. PMID 21172511 DOI: 10.1016/j.athoracsur.2010.07.057  0.023
2015 Brown JW, Boyd JH, Patel PM, Baker ML, Syed A, Ladowski J, Corvera J. Transcatheter Aortic Valve Replacement Versus Aortic Valve Bypass: A Comparison of Outcomes and Economics. The Annals of Thoracic Surgery. PMID 26365675 DOI: 10.1016/j.athoracsur.2015.05.125  0.022
2019 Brown N, Brown J. Age of consent? Archives of Disease in Childhood. PMID 31530541 DOI: 10.1136/archdischild-2019-318106  0.022
2013 Todman SH, Eltayeb O, Ruzmetov M, Rodefeld MD, Turrentine MW, Brown JW, Breinholt JP. Outcomes of interrupted aortic arch repair using the carotid artery turndown procedure. The Journal of Thoracic and Cardiovascular Surgery. 145: 176-82. PMID 23043963 DOI: 10.1016/j.jtcvs.2012.09.018  0.019
2014 Kiss S, Liu Y, Brown J, Holekamp NM, Almony A, Campbell J, Kowalski JW. Clinical monitoring of patients with age-related macular degeneration treated with intravitreal bevacizumab or ranibizumab. Ophthalmic Surgery, Lasers & Imaging Retina. 45: 285-91. PMID 25037010 DOI: 10.3928/23258160-20140709-04  0.018
2011 Brown JW, Dunne JW, Fatovich DM, Fatovic DM, Lee J, Lawn ND. Amphetamine-associated seizures: clinical features and prognosis. Epilepsia. 52: 401-4. PMID 21314677 DOI: 10.1111/j.1528-1167.2010.02924.x  0.017
2011 Brown JW, Ruzmetov M, Eltayeb O, Rodefeld MD, Turrentine MW. Performance of SynerGraft decellularized pulmonary homograft in patients undergoing a Ross procedure. The Annals of Thoracic Surgery. 91: 416-22; discussion 4. PMID 21256282 DOI: 10.1016/j.athoracsur.2010.10.069  0.014
2020 Brown J. Observations on the Practice of the Late Mr. James Ware, in Applying Vinous Tincture of Opium in Some Cases of Ophthalmia. The London Medical and Physical Journal. 34: 10-11. PMID 30493709  0.013
2011 Gammie JS, Brown JW. Stagnation in the ascending aorta after aortic valve bypass (apicoaortic) conduit surgery? Unlikely. The Annals of Thoracic Surgery. 92: 2302-3; author reply. PMID 22115257 DOI: 10.1016/j.athoracsur.2011.03.079  0.013
2009 Sharman JE, Brown J, Holland DJ, Macdonald G, Kostner K, Marwick TH. Influence of altered blood rheology on ventricular-vascular response to exercise. Hypertension. 54: 1092-8. PMID 19720954 DOI: 10.1161/HYPERTENSIONAHA.109.135525  0.012
2019 Brown J. Beware of the "J" Word. The Journal of Emergency Medicine. PMID 30808535 DOI: 10.1016/j.jemermed.2018.12.027  0.012
2011 Brown JW, Ruzmetov M, Shahriari A, Rodefeld MD, Turrentine MW, Mahomed Y. The Ross full root replacement in adults with bicuspid aortic valve disease. The Journal of Heart Valve Disease. 20: 332-9; discussion 34. PMID 21714426  0.011
2020 Brown J. Dr. Brown, on Ascarides. The Medical and Physical Journal. 7: 256-257. PMID 30490519  0.01
2015 Chen L, Brown JW, Mok YF, Hatters DM, McKnight CJ. The allosteric mechanism induced by protein kinase A (PKA) phosphorylation of dematin (band 4.9). The Journal of Biological Chemistry. 290: 17808. PMID 26188045 DOI: 10.1074/jbc.A112.438861  0.01
2015 Chen L, Brown JW, Mok YF, Hatters DM, McKnight CJ. The allosteric mechanism induced by protein kinase A (PKA) phosphorylation of dematin (band 4.9) (Journal of Biological Chemistry (2015) 290:29 (17808)) Journal of Biological Chemistry. 290: 17808. DOI: 10.1074/jbc.A112.438861  0.01
2014 Kiss S, Liu Y, Brown J, Holekamp NM, Almony A, Campbell J, Kowalski JW. Clinical utilization of anti-vascular endothelial growth-factor agents and patient monitoring in retinal vein occlusion and diabetic macular edema. Clinical Ophthalmology (Auckland, N.Z.). 8: 1611-21. PMID 25210429 DOI: 10.2147/OPTH.S60893  0.01
2014 Otto T, Jarenwattananon NN, Glöggler S, Brown JW, Melkonian A, Ertas YN, Bouchard LS. Effects of multivariate linker substitution, metal binding, and reactor conditions on the catalytic activity of a Pd-functionalized MOF for olefin hydrogenation Applied Catalysis a: General. 488: 248-255. DOI: 10.1016/j.apcata.2014.10.012  0.01
2013 Chen L, Brown JW, Mok YF, Hatters DM, McKnight CJ. The allosteric mechanism induced by protein kinase A (PKA) phosphorylation of dematin (band 4.9). The Journal of Biological Chemistry. 288: 8313-20. PMID 23355471 DOI: 10.1074/jbc.M112.438861  0.01
2013 Brown JW, Eltayeb MO, Ruzmetov M, Rodefeld MD, Turrentine MW. Ventricular to Pulmonary Artery Conduits Pediatric Cardiac Surgery: Fourth Edition. 443-456. DOI: 10.1002/9781118320754.ch24  0.01
2011 Knoderer CA, Saft SA, Walker SG, Rodefeld MD, Turrentine MW, Brown JW, Healy DP, Sowinski KM. Cefuroxime pharmacokinetics in pediatric cardiovascular surgery patients undergoing cardiopulmonary bypass. Journal of Cardiothoracic and Vascular Anesthesia. 25: 425-30. PMID 20864357 DOI: 10.1053/j.jvca.2010.07.022  0.01
2008 Hester DM, Brown J, Schonfeld T. Pragmatism, principles, and protection. The American Journal of Bioethics : Ajob. 8: 32-4. PMID 18576249 DOI: 10.1080/15265160802147025  0.01
2008 Haluska BA, Jeffriess L, Brown J, Downey M, Carlier SG, Marwick TH. Derivation of the distensibility coefficient using tissue Doppler as a marker of arterial function. Clinical Science (London, England : 1979). 114: 441-7. PMID 17919124 DOI: 10.1042/CS20070295  0.01
2002 Miller MD, Marty MA, Arcus A, Brown J, Morry D, Sandy M. Differences between children and adults: Implications for risk assessment at California EPA International Journal of Toxicology. 21: 403-418. PMID 12396687 DOI: 10.1080/10915810290096630  0.01
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