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Jeremy A. Miller - Publications

Affiliations: 
1996-2003 George Washington University, Washington, DC, United States 
 2003-2005 Smithsonian Institution, Washington, DC, United States 
 2005-2007 California Academy of Sciences, San Francisco, CA, United States 
 2007- National Centre for Biodiversity Naturalis, Leiden, Zuid-Holland, Netherlands 
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23 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Bakken TE, Miller JA, Ding SL, Sunkin SM, Smith KA, Ng L, Szafer A, Dalley RA, Royall JJ, Lemon T, Shapouri S, Aiona K, Arnold J, Bennett JL, Bertagnolli D, et al. A comprehensive transcriptional map of primate brain development. Nature. PMID 27409810 DOI: 10.1038/nature18637  0.68
2015 Hawrylycz M, Miller JA, Menon V, Feng D, Dolbeare T, Guillozet-Bongaarts AL, Jegga AG, Aronow BJ, Lee CK, Bernard A, Glasser MF, Dierker DL, Menche J, Szafer A, Collman F, et al. Canonical genetic signatures of the adult human brain. Nature Neuroscience. PMID 26571460 DOI: 10.1038/nn.4171  0.68
2015 Schilthuizen M, Vairappan CS, Slade EM, Mann DJ, Miller JA. Specimens as primary data: museums and 'open science'. Trends in Ecology & Evolution. 30: 237-8. PMID 25813120 DOI: 10.1016/j.tree.2015.03.002  0.68
2015 Sorensen SA, Bernard A, Menon V, Royall JJ, Glattfelder KJ, Desta T, Hirokawa K, Mortrud M, Miller JA, Zeng H, Hohmann JG, Jones AR, Lein ES. Correlated gene expression and target specificity demonstrate excitatory projection neuron diversity. Cerebral Cortex (New York, N.Y. : 1991). 25: 433-49. PMID 24014670 DOI: 10.1093/cercor/bht243  0.68
2014 Thompson CL, Ng L, Menon V, Martinez S, Lee CK, Glattfelder K, Sunkin SM, Henry A, Lau C, Dang C, Garcia-Lopez R, Martinez-Ferre A, Pombero A, Rubenstein JL, Wakeman WB, ... ... Miller J, et al. A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. Neuron. 83: 309-23. PMID 24952961 DOI: 10.1016/j.neuron.2014.05.033  0.68
2014 Miller JA, Ding SL, Sunkin SM, Smith KA, Ng L, Szafer A, Ebbert A, Riley ZL, Royall JJ, Aiona K, Arnold JM, Bennet C, Bertagnolli D, Brouner K, Butler S, et al. Transcriptional landscape of the prenatal human brain. Nature. 508: 199-206. PMID 24695229 DOI: 10.1038/nature13185  0.68
2014 Miller JA, Menon V, Goldy J, Kaykas A, Lee CK, Smith KA, Shen EH, Phillips JW, Lein ES, Hawrylycz MJ. Improving reliability and absolute quantification of human brain microarray data by filtering and scaling probes using RNA-Seq. Bmc Genomics. 15: 154. PMID 24564186 DOI: 10.1186/1471-2164-15-154  0.68
2014 Goyal MS, Hawrylycz M, Miller JA, Snyder AZ, Raichle ME. Aerobic glycolysis in the human brain is associated with development and neotenous gene expression. Cell Metabolism. 19: 49-57. PMID 24411938 DOI: 10.1016/j.cmet.2013.11.020  0.68
2013 Willsey AJ, Sanders SJ, Li M, Dong S, Tebbenkamp AT, Muhle RA, Reilly SK, Lin L, Fertuzinhos S, Miller JA, Murtha MT, Bichsel C, Niu W, Cotney J, Ercan-Sencicek AG, et al. Coexpression networks implicate human midfetal deep cortical projection neurons in the pathogenesis of autism. Cell. 155: 997-1007. PMID 24267886 DOI: 10.1016/j.cell.2013.10.020  0.68
2013 Miller JA, Nathanson J, Franjic D, Shim S, Dalley RA, Shapouri S, Smith KA, Sunkin SM, Bernard A, Bennett JL, Lee CK, Hawrylycz MJ, Jones AR, Amaral DG, Å estan N, et al. Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates. Development (Cambridge, England). 140: 4633-44. PMID 24154525 DOI: 10.1242/dev.097212  0.68
2013 Sanz E, Evanoff R, Quintana A, Evans E, Miller JA, Ko C, Amieux PS, Griswold MD, McKnight GS. RiboTag analysis of actively translated mRNAs in Sertoli and Leydig cells in vivo. Plos One. 8: e66179. PMID 23776628 DOI: 10.1371/journal.pone.0066179  0.68
2013 Miller JA, Woltjer RL, Goodenbour JM, Horvath S, Geschwind DH. Genes and pathways underlying regional and cell type changes in Alzheimer's disease. Genome Medicine. 5: 48. PMID 23705665 DOI: 10.1186/gm452  0.68
2013 Levine AJ, Miller JA, Shapshak P, Gelman B, Singer EJ, Hinkin CH, Commins D, Morgello S, Grant I, Horvath S. Systems analysis of human brain gene expression: mechanisms for HIV-associated neurocognitive impairment and common pathways with Alzheimer's disease. Bmc Medical Genomics. 6: 4. PMID 23406646 DOI: 10.1186/1755-8794-6-4  0.68
2012 Miller J, Dikow T, Agosti D, Sautter G, Catapano T, Penev L, Zhang ZQ, Pentcheff D, Pyle R, Blum S, Parr C, Freeland C, Garnett T, Ford LS, Muller B, et al. From taxonomic literature to cybertaxonomic content. Bmc Biology. 10: 87. PMID 23114078 DOI: 10.1186/1741-7007-10-87  0.68
2012 Gelman BB, Chen T, Lisinicchia JG, Soukup VM, Carmical JR, Starkey JM, Masliah E, Commins DL, Brandt D, Grant I, Singer EJ, Levine AJ, Miller J, Winkler JM, Fox HS, et al. The National NeuroAIDS Tissue Consortium brain gene array: two types of HIV-associated neurocognitive impairment. Plos One. 7: e46178. PMID 23049970 DOI: 10.1371/journal.pone.0046178  0.68
2012 Hawrylycz MJ, Lein ES, Guillozet-Bongaarts AL, Shen EH, Ng L, Miller JA, van de Lagemaat LN, Smith KA, Ebbert A, Riley ZL, Abajian C, Beckmann CF, Bernard A, Bertagnolli D, Boe AF, et al. An anatomically comprehensive atlas of the adult human brain transcriptome. Nature. 489: 391-9. PMID 22996553 DOI: 10.1038/nature11405  0.68
2012 Miller JA, Griswold CE, Scharff N, Rezá? M, Sz?ts T, Marhabaie M. The velvet spiders: an atlas of the Eresidae (Arachnida, Araneae). Zookeys. 1-144. PMID 22679386 DOI: 10.3897/zookeys.195.2342  0.68
2011 Miller JA, Cai C, Langfelder P, Geschwind DH, Kurian SM, Salomon DR, Horvath S. Strategies for aggregating gene expression data: the collapseRows R function. Bmc Bioinformatics. 12: 322. PMID 21816037 DOI: 10.1186/1471-2105-12-322  0.68
2010 Penev L, Agosti D, Georgiev T, Catapano T, Miller J, Blagoderov V, Roberts D, Smith VS, Brake I, Ryrcroft S, Scott B, Johnson NF, Morris RA, Sautter G, Chavan V, et al. Semantic tagging of and semantic enhancements to systematics papers: ZooKeys working examples. Zookeys. 1-16. PMID 21594113 DOI: 10.3897/zookeys.50.538  0.68
2010 Miller JA, Carmichael A, Ramírez MJ, Spagna JC, Haddad CR, Rezác M, Johannesen J, Král J, Wang XP, Griswold CE. Phylogeny of entelegyne spiders: affinities of the family Penestomidae (NEW RANK), generic phylogeny of Eresidae, and asymmetric rates of change in spinning organ evolution (Araneae, Araneoidea, Entelegynae). Molecular Phylogenetics and Evolution. 55: 786-804. PMID 20206276 DOI: 10.1016/j.ympev.2010.02.021  0.68
2009 Coddington JA, Agnarsson I, Miller JA, Kuntner M, Hormiga G. Undersampling bias: the null hypothesis for singleton species in tropical arthropod surveys. The Journal of Animal Ecology. 78: 573-84. PMID 19245379 DOI: 10.1111/j.1365-2656.2009.01525.x  0.68
2007 Ramírez MJ, Coddington JA, Maddison WP, Midford PE, Prendini L, Miller J, Griswold CE, Hormiga G, Sierwald P, Scharff N, Benjamin SP, Wheeler WC. Linking of digital images to phylogenetic data matrices using a morphological ontology. Systematic Biology. 56: 283-94. PMID 17464883 DOI: 10.1080/10635150701313848  0.68
2003 Miller JA. Assessing progress in systematics with continuous jackknife function analysis. Systematic Biology. 52: 55-65. PMID 12554440  0.68
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