David S. Guttman - Publications

University of Toronto, Toronto, ON, Canada 
bacterial evolution, genomics, microbiome

122 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Martel A, Laflamme B, Breit-McNally C, Wang P, Lonjon F, Desveaux D, Guttman DS. Metaeffector interactions modulate the type III effector-triggered immunity load of Pseudomonas syringae. Plos Pathogens. 18: e1010541. PMID 35576228 DOI: 10.1371/journal.ppat.1010541  0.327
2022 Bundalovic-Torma C, Lonjon F, Desveaux D, Guttman DS. Diversity, Evolution, and Function of Effectoromes. Annual Review of Phytopathology. PMID 35537470 DOI: 10.1146/annurev-phyto-021621-121935  0.362
2022 Breit-McNally C, Desveaux D, Guttman DS. The Arabidopsis effector-triggered immunity landscape is conserved in oilseed crops. Scientific Reports. 12: 6534. PMID 35444223 DOI: 10.1038/s41598-022-10410-w  0.334
2021 Dillon MM, Ruiz-Bedoya T, Bundalovic-Torma C, Guttman KM, Kwak H, Middleton MA, Wang PW, Horuz S, Aysan Y, Guttman DS. Comparative genomic insights into the epidemiology and virulence of plant pathogenic pseudomonads from Turkey. Microbial Genomics. 7. PMID 34227931 DOI: 10.1099/mgen.0.000585  0.399
2021 Martel A, Ruiz-Bedoya T, Breit-McNally C, Laflamme B, Desveaux D, Guttman DS. The ETS-ETI cycle: evolutionary processes and metapopulation dynamics driving the diversification of pathogen effectors and host immune factors. Current Opinion in Plant Biology. 62: 102011. PMID 33677388 DOI: 10.1016/j.pbi.2021.102011  0.341
2020 Martel A, Laflamme B, Seto D, Bastedo DP, Dillon MM, Almeida RND, Guttman DS, Desveaux D. Immunodiversity of the ZAR1 NLR Is Conveyed by Receptor-Like Cytoplasmic Kinase Sensors. Frontiers in Plant Science. 11: 1290. PMID 32983191 DOI: 10.3389/Fpls.2020.01290  0.342
2020 Isabel S, Graña-Miraglia L, Gutierrez JM, Bundalovic-Torma C, Groves HE, Isabel MR, Eshaghi A, Patel SN, Gubbay JB, Poutanen T, Guttman DS, Poutanen SM. Evolutionary and structural analyses of SARS-CoV-2 D614G spike protein mutation now documented worldwide. Scientific Reports. 10: 14031. PMID 32820179 DOI: 10.1038/S41598-020-70827-Z  0.368
2020 Vázquez-Rosas-Landa M, Ponce-Soto GY, Aguirre-Liguori JA, Thakur S, Scheinvar E, Barrera-Redondo J, Ibarra-Laclette E, Guttman DS, Eguiarte LE, Souza V. Population genomics of Vibrionaceae isolated from an endangered oasis reveals local adaptation after an environmental perturbation. Bmc Genomics. 21: 418. PMID 32571204 DOI: 10.1186/S12864-020-06829-Y  0.793
2020 Laflamme B, Dillon MM, Martel A, Almeida RND, Desveaux D, Guttman DS. The pan-genome effector-triggered immunity landscape of a host-pathogen interaction. Science (New York, N.Y.). 367: 763-768. PMID 32054757 DOI: 10.1126/Science.Aax4079  0.488
2020 Zou A, Nadeau K, Wang PW, Lee JY, Guttman DS, Sharif S, Korver DR, Brumell JH, Parkinson J. Accumulation of genetic variants associated with immunity in the selective breeding of broilers. Bmc Genetics. 21: 5. PMID 31952471 DOI: 10.1186/S12863-020-0807-Z  0.304
2019 Martel A, Lo T, Desveaux D, Guttman DS. A high-throughput, seedling screen for plant immunity. Molecular Plant-Microbe Interactions : Mpmi. PMID 31851574 DOI: 10.1094/Mpmi-10-19-0295-Ta  0.45
2019 Bastedo DP, Khan M, Martel A, Seto D, Kireeva I, Zhang J, Masud W, Millar D, Lee JY, Lee AH, Gong Y, Santos-Severino A, Guttman DS, Desveaux D. Perturbations of the ZED1 pseudokinase activate plant immunity. Plos Pathogens. 15: e1007900. PMID 31269090 DOI: 10.1371/Journal.Ppat.1007900  0.377
2019 Bastedo DP, Lo T, Laflamme B, Desveaux D, Guttman DS. Diversity and Evolution of Type III Secreted Effectors: A Case Study of Three Families. Current Topics in Microbiology and Immunology. PMID 31240408 DOI: 10.1007/82_2019_165  0.442
2019 Dillon MM, Almeida RND, Laflamme B, Martel A, Weir BS, Desveaux D, Guttman DS. Molecular Evolution of Type III Secreted Effector Proteins. Frontiers in Plant Science. 10: 418. PMID 31024592 DOI: 10.3389/Fpls.2019.00418  0.506
2019 Mott GA, Smakowska-Luzan E, Pasha A, Parys K, Howton TC, Neuhold J, Lehner A, Grünwald K, Stolt-Bergner P, Provart NJ, Mukhtar MS, Desveaux D, Guttman DS, Belkhadir Y. Map of physical interactions between extracellular domains of Arabidopsis leucine-rich repeat receptor kinases. Scientific Data. 6: 190025. PMID 30806640 DOI: 10.1038/Sdata.2019.25  0.318
2019 Dillon MM, Thakur S, Almeida RND, Wang PW, Weir BS, Guttman DS. Recombination of ecologically and evolutionarily significant loci maintains genetic cohesion in the Pseudomonas syringae species complex. Genome Biology. 20: 3. PMID 30606234 DOI: 10.1186/S13059-018-1606-Y  0.8
2018 Huei-Yi Lee A, Bastedo DP, Youn JY, Lo T, Middleton MA, Kireeva I, Lee JY, Sharifpoor S, Baryshnikova A, Zhang J, Wang PW, Peisajovich SG, Costanzo M, Andrews BJ, Boone CM, ... ... Guttman DS, et al. Identifying Type III Secreted Effector Function via a Yeast Genomic Screen. G3 (Bethesda, Md.). PMID 30573466 DOI: 10.1534/G3.118.200877  0.464
2018 Popovic A, Bourdon C, Wang PW, Guttman DS, Voskuijl W, Grigg ME, Bandsma RHJ, Parkinson J. Design and application of a novel two-amplicon approach for defining eukaryotic microbiota. Microbiome. 6: 228. PMID 30572961 DOI: 10.1186/S40168-018-0612-3  0.318
2018 Diaz Caballero J, Clark ST, Wang PW, Donaldson SL, Coburn B, Tullis DE, Yau YCW, Waters VJ, Hwang DM, Guttman DS. A genome-wide association analysis reveals a potential role for recombination in the evolution of antimicrobial resistance in Burkholderia multivorans. Plos Pathogens. 14: e1007453. PMID 30532201 DOI: 10.1371/Journal.Ppat.1007453  0.358
2018 Layeghifard M, Hwang DM, Guttman DS. Constructing and Analyzing Microbiome Networks in R. Methods in Molecular Biology (Clifton, N.J.). 1849: 243-266. PMID 30298259 DOI: 10.1007/978-1-4939-8728-3_16  0.309
2018 Fitzpatrick CR, Lu-Irving P, Copeland J, Guttman DS, Wang PW, Baltrus DA, Dlugosch KM, Johnson MTJ. Chloroplast sequence variation and the efficacy of peptide nucleic acids for blocking host amplification in plant microbiome studies. Microbiome. 6: 144. PMID 30121081 DOI: 10.1186/S40168-018-0534-0  0.415
2018 Sheppard SK, Guttman DS, Fitzgerald JR. Population genomics of bacterial host adaptation. Nature Reviews. Genetics. PMID 29973680 DOI: 10.1038/S41576-018-0032-Z  0.43
2018 Gritsunov A, Peek J, Diaz Caballero J, Guttman D, Christendat D. Structural and biochemical approaches uncover multiple evolutionary trajectories of plant quinate dehydrogenases. The Plant Journal : For Cell and Molecular Biology. PMID 29890023 DOI: 10.2210/Pdb6Bmq/Pdb  0.387
2018 Turpin W, Bedrani L, Espin-Garcia O, Xu W, Silverberg MS, Smith MI, Guttman DS, Griffiths A, Moayyedi P, Panaccione R, Huynh H, Steinhart H, Aumais G, Shestopaloff K, Dieleman LA, et al. FUT2 genotype and secretory status are not associated with fecal microbial composition and inferred function in healthy subjects. Gut Microbes. 1-24. PMID 29533703 DOI: 10.1080/19490976.2018.1445956  0.327
2018 Clark ST, Guttman DS, Hwang DM. Diversification of Pseudomonas aeruginosa within the cystic fibrosis lung and its effects on antibiotic resistance. Fems Microbiology Letters. PMID 29401362 DOI: 10.1093/Femsle/Fny026  0.381
2018 Fitzpatrick CR, Copeland J, Wang PW, Guttman DS, Kotanen PM, Johnson MTJ. Assembly and ecological function of the root microbiome across angiosperm plant species. Proceedings of the National Academy of Sciences of the United States of America. PMID 29358405 DOI: 10.1073/Pnas.1717617115  0.413
2018 Smakowska-Luzan E, Mott GA, Parys K, Stegmann M, Howton TC, Layeghifard M, Neuhold J, Lehner A, Kong J, Grünwald K, Weinberger N, Satbhai SB, Mayer D, Busch W, Madalinski M, ... ... Guttman DS, et al. An extracellular network of Arabidopsis leucine-rich repeat receptor kinases. Nature. PMID 29320478 DOI: 10.1038/Nature25184  0.316
2017 Mott GA, Desveaux D, Guttman DS. A high-sensitivity, microtiter-based plate assay for plant MAMP-triggered immunity. Molecular Plant-Microbe Interactions : Mpmi. PMID 29199888 DOI: 10.1094/Mpmi-11-17-0279-Ta  0.393
2017 Assis RAB, Polloni LC, Patané JSL, Thakur S, Felestrino ÉB, Diaz-Caballero J, Digiampietri LA, Goulart LR, Almeida NF, Nascimento R, Dandekar AM, Zaini PA, Setubal JC, Guttman DS, Moreira LM. Identification and analysis of seven effector protein families with different adaptive and evolutionary histories in plant-associated members of the Xanthomonadaceae. Scientific Reports. 7: 16133. PMID 29170530 DOI: 10.1038/S41598-017-16325-1  0.817
2017 Gong Y, Desveaux D, Guttman DS, Lewis JD. A Practical Guide to Quantitative Interactor Screening with Next-Generation Sequencing (QIS-Seq). Methods in Molecular Biology (Clifton, N.J.). 1613: 1-20. PMID 28849555 DOI: 10.1007/978-1-4939-7027-8_1  0.536
2017 Shrestha SD, Guttman DS, Perron GG. Draft Genome Sequences of 10 Environmental Pseudomonas aeruginosa Strains Isolated from Soils, Sediments, and Waters. Genome Announcements. 5. PMID 28839021 DOI: 10.1128/Genomea.00804-17  0.35
2017 Seto D, Koulena N, Lo T, Menna A, Guttman DS, Desveaux D. Expanded type III effector recognition by the ZAR1 NLR protein using ZED1-related kinases. Nature Plants. 3: 17027. PMID 28288096 DOI: 10.1038/Nplants.2017.27  0.369
2017 Mott GA, Guttman DS, Desveaux D. The study of pattern-triggered immunity in Arabidopsis Canadian Journal of Plant Pathology. 39: 275-281. DOI: 10.1080/07060661.2017.1355850  0.381
2016 Laflamme B, Middleton M, Lo T, Desveaux D, Guttman DS. Image-Based Quantification of Plant Immunity and Disease. Molecular Plant-Microbe Interactions : Mpmi. MPMI07160129TA. PMID 27996374 DOI: 10.1094/Mpmi-07-16-0129-Ta  0.351
2016 Baltrus DA, McCann HC, Guttman DS. Evolution, Genomics and Epidemiology of Pseudomonas syringae. Molecular Plant Pathology. PMID 27798954 DOI: 10.1111/Mpp.12506  0.417
2016 Yan D, Easwaran V, Chau V, Okamoto M, Ierullo M, Kimura M, Endo A, Yano R, Pasha A, Gong Y, Bi YM, Provart N, Guttman D, Krapp A, Rothstein SJ, et al. NIN-like protein 8 is a master regulator of nitrate-promoted seed germination in Arabidopsis. Nature Communications. 7: 13179. PMID 27731416 DOI: 10.1038/Ncomms13179  0.313
2016 Turpin W, Espin-Garcia O, Xu W, Silverberg MS, Kevans D, Smith MI, Guttman DS, Griffiths A, Panaccione R, Otley A, Xu L, Shestopaloff K, Moreno-Hagelsieb G, Paterson AD, et al. Association of host genome with intestinal microbial composition in a large healthy cohort. Nature Genetics. PMID 27694960 DOI: 10.1038/Ng.3693  0.343
2016 Waese J, Pasha A, Wang T, van Weringh A, Guttman DS, Provart NJ. Gene Slider: Sequence Logo Interactive Data-visualization for Education and Research. Bioinformatics (Oxford, England). PMID 27522081 DOI: 10.1093/Bioinformatics/Btw525  0.306
2016 Thakur S, Guttman DS. A De-Novo Genome Analysis Pipeline (DeNoGAP) for large-scale comparative prokaryotic genomics studies. Bmc Bioinformatics. 17: 260. PMID 27363390 DOI: 10.1186/S12859-016-1142-2  0.784
2016 Bondy-Denomy J, Qian J, Westra ER, Buckling A, Guttman DS, Davidson AR, Maxwell KL. Prophages mediate defense against phage infection through diverse mechanisms. The Isme Journal. PMID 27258950 DOI: 10.1038/Ismej.2016.79  0.401
2016 Mott GA, Thakur S, Smakowska E, Wang PW, Belkhadir Y, Desveaux D, Guttman DS. Genomic screens identify a new phytobacterial microbe-associated molecular pattern and the cognate Arabidopsis receptor-like kinase that mediates its immune elicitation. Genome Biology. 17: 98. PMID 27160854 DOI: 10.1186/S13059-016-0955-7  0.793
2016 Lo T, Koulena N, Seto D, Guttman DS, Desveaux D. The HopF family of Pseudomonas syringae type III secreted effectors. Molecular Plant Pathology. PMID 27061875 DOI: 10.1111/Mpp.12412  0.415
2016 Thakur S, Weir BS, Guttman DS. Phytopathogen Genome Announcement: Draft Genome Sequences of 62 Pseudomonas syringae Type and Pathotype Strains. Molecular Plant-Microbe Interactions : Mpmi. MPMI01160013TA. PMID 26883489 DOI: 10.1094/Mpmi-01-16-0013-Ta  0.806
2015 Sistrom M, Park D, O'Brien HE, Wang Z, Guttman DS, Townsend JP, Turner PE. Genomic and Gene-Expression Comparisons among Phage-Resistant Type-IV Pilus Mutants of Pseudomonas syringae pathovar phaseolicola. Plos One. 10: e0144514. PMID 26670219 DOI: 10.1371/Journal.Pone.0144514  0.404
2015 Menna A, Nguyen D, Guttman DS, Desveaux D. Elevated Temperature Differentially Influences Effector-Triggered Immunity Outputs in Arabidopsis. Frontiers in Plant Science. 6: 995. PMID 26617631 DOI: 10.3389/Fpls.2015.00995  0.426
2015 Kim SH, Clark ST, Surendra A, Copeland JK, Wang PW, Ammar R, Collins C, Tullis DE, Nislow C, Hwang DM, Guttman DS, Cowen LE. Global Analysis of the Fungal Microbiome in Cystic Fibrosis Patients Reveals Loss of Function of the Transcriptional Repressor Nrg1 as a Mechanism of Pathogen Adaptation. Plos Pathogens. 11: e1005308. PMID 26588216 DOI: 10.1371/Journal.Ppat.1005308  0.399
2015 Diaz Caballero J, Clark ST, Coburn B, Zhang Y, Wang PW, Donaldson SL, Tullis DE, Yau YC, Waters VJ, Hwang DM, Guttman DS. Selective Sweeps and Parallel Pathoadaptation Drive Pseudomonas aeruginosa Evolution in the Cystic Fibrosis Lung. Mbio. 6: e00981-15. PMID 26330513 DOI: 10.1128/Mbio.00981-15  0.384
2015 Trantas EA, Licciardello G, Almeida NF, Witek K, Strano CP, Duxbury Z, Ververidis F, Goumas DE, Jones JD, Guttman DS, Catara V, Sarris PF. Comparative genomic analysis of multiple strains of two unusual plant pathogens: Pseudomonas corrugata and Pseudomonas mediterranea. Frontiers in Microbiology. 6: 811. PMID 26300874 DOI: 10.3389/Fmicb.2015.00811  0.491
2015 Clark ST, Diaz Caballero J, Cheang M, Coburn B, Wang PW, Donaldson SL, Zhang Y, Liu M, Keshavjee S, Yau YC, Waters VJ, Elizabeth Tullis D, Guttman DS, Hwang DM. Phenotypic diversity within a Pseudomonas aeruginosa population infecting an adult with cystic fibrosis. Scientific Reports. 5: 10932. PMID 26047320 DOI: 10.1038/Srep10932  0.309
2015 Copeland JK, Yuan L, Layeghifard M, Wang PW, Guttman DS. Seasonal community succession of the phyllosphere microbiome. Molecular Plant-Microbe Interactions : Mpmi. 28: 274-85. PMID 25679538 DOI: 10.1094/Mpmi-10-14-0331-Fi  0.338
2015 Azad MB, Konya T, Guttman DS, Field CJ, Sears MR, HayGlass KT, Mandhane PJ, Turvey SE, Subbarao P, Becker AB, Scott JA, Kozyrskyj AL. Infant gut microbiota and food sensitization: associations in the first year of life. Clinical and Experimental Allergy : Journal of the British Society For Allergy and Clinical Immunology. 45: 632-43. PMID 25599982 DOI: 10.1111/Cea.12487  0.323
2014 Lewis JD, Wilton M, Mott GA, Lu W, Hassan JA, Guttman DS, Desveaux D. Immunomodulation by the Pseudomonas syringae HopZ type III effector family in Arabidopsis. Plos One. 9: e116152. PMID 25546415 DOI: 10.1371/Journal.Pone.0116152  0.615
2014 Hurley B, Subramaniam R, Guttman DS, Desveaux D. Proteomics of effector-triggered immunity (ETI) in plants. Virulence. 5: 752-60. PMID 25513776 DOI: 10.4161/Viru.36329  0.405
2014 Mott GA, Middleton MA, Desveaux D, Guttman DS. Peptides and small molecules of the plant-pathogen apoplastic arena. Frontiers in Plant Science. 5: 677. PMID 25506352 DOI: 10.3389/Fpls.2014.00677  0.418
2014 Hurley B, Lee D, Mott A, Wilton M, Liu J, Liu YC, Angers S, Coaker G, Guttman DS, Desveaux D. The Pseudomonas syringae type III effector HopF2 suppresses Arabidopsis stomatal immunity. Plos One. 9: e114921. PMID 25503437 DOI: 10.1371/Journal.Pone.0114921  0.37
2014 Guttman DS, McHardy AC, Schulze-Lefert P. Microbial genome-enabled insights into plant-microorganism interactions. Nature Reviews. Genetics. 15: 797-813. PMID 25266034 DOI: 10.1038/Nrg3748  0.439
2014 Konya T, Koster B, Maughan H, Escobar M, Azad MB, Guttman DS, Sears MR, Becker AB, Brook JR, Takaro TK, Kozyrskyj AL, Scott JA. Associations between bacterial communities of house dust and infant gut. Environmental Research. 131: 25-30. PMID 24637181 DOI: 10.1016/J.Envres.2014.02.005  0.323
2014 Üstün S, König P, Guttman DS, Börnke F. HopZ4 from Pseudomonas syringae, a member of the HopZ type III effector family from the YopJ superfamily, inhibits the proteasome in plants. Molecular Plant-Microbe Interactions : Mpmi. 27: 611-23. PMID 24625030 DOI: 10.1094/Mpmi-12-13-0363-R  0.416
2014 Lewis JD, Lo T, Bastedo P, Guttman DS, Desveaux D. The rise of the undead: pseudokinases as mediators of effector-triggered immunity. Plant Signaling & Behavior. 9: e27563. PMID 24398910 DOI: 10.4161/Psb.27563  0.631
2014 Austin RS, Chatfield SP, Desveaux D, Guttman DS. Next-generation mapping of genetic mutations using bulk population sequencing. Methods in Molecular Biology (Clifton, N.J.). 1062: 301-15. PMID 24057374 DOI: 10.1007/978-1-62703-580-4_17  0.56
2013 Lewis JD, Lee AH, Hassan JA, Wan J, Hurley B, Jhingree JR, Wang PW, Lo T, Youn JY, Guttman DS, Desveaux D. The Arabidopsis ZED1 pseudokinase is required for ZAR1-mediated immunity induced by the Pseudomonas syringae type III effector HopZ1a. Proceedings of the National Academy of Sciences of the United States of America. 110: 18722-7. PMID 24170858 DOI: 10.1073/Pnas.1315520110  0.644
2013 McCann HC, Rikkerink EH, Bertels F, Fiers M, Lu A, Rees-George J, Andersen MT, Gleave AP, Haubold B, Wohlers MW, Guttman DS, Wang PW, Straub C, Vanneste JL, Vanneste J, et al. Genomic analysis of the Kiwifruit pathogen Pseudomonas syringae pv. actinidiae provides insight into the origins of an emergent plant disease. Plos Pathogens. 9: e1003503. PMID 23935484 DOI: 10.1371/Journal.Ppat.1003503  0.452
2013 Zhou Z, McCann A, Litrup E, Murphy R, Cormican M, Fanning S, Brown D, Guttman DS, Brisse S, Achtman M. Neutral genomic microevolution of a recently emerged pathogen, Salmonella enterica serovar Agona. Plos Genetics. 9: e1003471. PMID 23637636 DOI: 10.1371/Journal.Pgen.1003471  0.436
2013 Lee AH, Middleton MA, Guttman DS, Desveaux D. Phytopathogen type III effectors as probes of biological systems. Microbial Biotechnology. 6: 230-40. PMID 23433088 DOI: 10.1111/1751-7915.12042  0.44
2012 Schreiber KJ, Austin RS, Gong Y, Zhang J, Fung P, Wang PW, Guttman DS, Desveaux D. Forward chemical genetic screens in Arabidopsis identify genes that influence sensitivity to the phytotoxic compound sulfamethoxazole. Bmc Plant Biology. 12: 226. PMID 23176361 DOI: 10.1186/1471-2229-12-226  0.577
2012 Maughan H, Wang PW, Diaz Caballero J, Fung P, Gong Y, Donaldson SL, Yuan L, Keshavjee S, Zhang Y, Yau YC, Waters VJ, Tullis DE, Hwang DM, Guttman DS. Analysis of the cystic fibrosis lung microbiota via serial Illumina sequencing of bacterial 16S rRNA hypervariable regions. Plos One. 7: e45791. PMID 23056217 DOI: 10.1371/Journal.Pone.0045791  0.317
2012 Waters V, Zlosnik JE, Yau YC, Speert DP, Aaron SD, Guttman DS. Comparison of three typing methods for Pseudomonas aeruginosa isolates from patients with cystic fibrosis. European Journal of Clinical Microbiology & Infectious Diseases : Official Publication of the European Society of Clinical Microbiology. 31: 3341-50. PMID 22843295 DOI: 10.1007/S10096-012-1701-Z  0.301
2012 O'Brien HE, Thakur S, Gong Y, Fung P, Zhang J, Yuan L, Wang PW, Yong C, Scortichini M, Guttman DS. Extensive remodeling of the Pseudomonas syringae pv. avellanae type III secretome associated with two independent host shifts onto hazelnut. Bmc Microbiology. 12: 141. PMID 22800299 DOI: 10.1186/1471-2180-12-141  0.825
2012 Mazzaglia A, Studholme DJ, Taratufolo MC, Cai R, Almeida NF, Goodman T, Guttman DS, Vinatzer BA, Balestra GM. Pseudomonas syringae pv. actinidiae (PSA) isolates from recent bacterial canker of kiwifruit outbreaks belong to the same genetic lineage. Plos One. 7: e36518. PMID 22590555 DOI: 10.1371/Journal.Pone.0036518  0.653
2012 McCann HC, Nahal H, Thakur S, Guttman DS. Identification of innate immunity elicitors using molecular signatures of natural selection. Proceedings of the National Academy of Sciences of the United States of America. 109: 4215-20. PMID 22323605 DOI: 10.1073/Pnas.1113893109  0.803
2012 Lee AH, Hurley B, Felsensteiner C, Yea C, Ckurshumova W, Bartetzko V, Wang PW, Quach V, Lewis JD, Liu YC, Börnke F, Angers S, Wilde A, Guttman DS, Desveaux D. A bacterial acetyltransferase destroys plant microtubule networks and blocks secretion. Plos Pathogens. 8: e1002523. PMID 22319451 DOI: 10.1371/Journal.Ppat.1002523  0.594
2012 Lewis JD, Wan J, Ford R, Gong Y, Fung P, Nahal H, Wang PW, Desveaux D, Guttman DS. Quantitative Interactor Screening with next-generation Sequencing (QIS-Seq) identifies Arabidopsis thaliana MLO2 as a target of the Pseudomonas syringae type III effector HopZ2. Bmc Genomics. 13: 8. PMID 22230763 DOI: 10.1186/1471-2164-13-8  0.572
2012 Stavrinides J, Kirzinger MW, Beasley FC, Guttman DS. E622, a miniature, virulence-associated mobile element. Journal of Bacteriology. 194: 509-17. PMID 22081398 DOI: 10.1128/Jb.06211-11  0.715
2012 Sohn KH, Saucet SB, Clarke CR, Vinatzer BA, O'Brien HE, Guttman DS, Jones JD. HopAS1 recognition significantly contributes to Arabidopsis nonhost resistance to Pseudomonas syringae pathogens. The New Phytologist. 193: 58-66. PMID 22053875 DOI: 10.1111/J.1469-8137.2011.03950.X  0.697
2011 O'Brien HE, Gong Y, Fung P, Wang PW, Guttman DS. Use of low-coverage, large-insert, short-read data for rapid and accurate generation of enhanced-quality draft Pseudomonas genome sequences. Plos One. 6: e27199. PMID 22073286 DOI: 10.1371/Journal.Pone.0027199  0.369
2011 Lewis JD, Lee A, Ma W, Zhou H, Guttman DS, Desveaux D. The YopJ superfamily in plant-associated bacteria. Molecular Plant Pathology. 12: 928-37. PMID 21726386 DOI: 10.1111/J.1364-3703.2011.00719.X  0.748
2011 O'Brien HE, Thakur S, Guttman DS. Evolution of plant pathogenesis in Pseudomonas syringae: a genomics perspective. Annual Review of Phytopathology. 49: 269-89. PMID 21568703 DOI: 10.1146/Annurev-Phyto-072910-095242  0.827
2011 Austin RS, Vidaurre D, Stamatiou G, Breit R, Provart NJ, Bonetta D, Zhang J, Fung P, Gong Y, Wang PW, McCourt P, Guttman DS. Next-generation mapping of Arabidopsis genes. The Plant Journal : For Cell and Molecular Biology. 67: 715-25. PMID 21518053 DOI: 10.1111/J.1365-313X.2011.04619.X  0.558
2011 MacDonald J, Doering M, Canam T, Gong Y, Guttman DS, Campbell MM, Master ER. Transcriptomic responses of the softwood-degrading white-rot fungus Phanerochaete carnosa during growth on coniferous and deciduous wood. Applied and Environmental Microbiology. 77: 3211-8. PMID 21441342 DOI: 10.1128/Aem.02490-10  0.308
2011 O'Brien HE, Desveaux D, Guttman DS. Next-generation genomics of Pseudomonas syringae. Current Opinion in Microbiology. 14: 24-30. PMID 21233007 DOI: 10.1016/J.Mib.2010.12.007  0.479
2010 Anderson JB, Funt J, Thompson DA, Prabhu S, Socha A, Sirjusingh C, Dettman JR, Parreiras L, Guttman DS, Regev A, Kohn LM. Determinants of divergent adaptation and Dobzhansky-Muller interaction in experimental yeast populations. Current Biology : Cb. 20: 1383-8. PMID 20637622 DOI: 10.1016/J.Cub.2010.06.022  0.346
2010 Lewis JD, Wu R, Guttman DS, Desveaux D. Allele-specific virulence attenuation of the Pseudomonas syringae HopZ1a type III effector via the Arabidopsis ZAR1 resistance protein. Plos Genetics. 6: e1000894. PMID 20368970 DOI: 10.1371/Journal.Pgen.1000894  0.595
2010 Almeida NF, Yan S, Cai R, Clarke CR, Morris CE, Schaad NW, Schuenzel EL, Lacy GH, Sun X, Jones JB, Castillo JA, Bull CT, Leman S, Guttman DS, Setubal JC, et al. PAMDB, a multilocus sequence typing and analysis database and website for plant-associated microbes. Phytopathology. 100: 208-15. PMID 20128693 DOI: 10.1094/Phyto-100-3-0208  0.754
2010 Clarke CR, Cai R, Studholme DJ, Guttman DS, Vinatzer BA. Pseudomonas syringae strains naturally lacking the classical P. syringae hrp/hrc Locus are common leaf colonizers equipped with an atypical type III secretion system. Molecular Plant-Microbe Interactions : Mpmi. 23: 198-210. PMID 20064063 DOI: 10.1094/Mpmi-23-2-0198  0.656
2010 Guttman DS, Stavrinides J. Population Genomics of Bacteria Bacterial Population Genetics in Infectious Disease. 121-151. DOI: 10.1002/9780470600122.ch7  0.68
2009 Guttman DS. Bacterial evolution: dynamic genomes and the power of transformation. Current Biology : Cb. 19: R857-9. PMID 19788881 DOI: 10.1016/J.Cub.2009.08.007  0.414
2009 Lewis JD, Guttman DS, Desveaux D. The targeting of plant cellular systems by injected type III effector proteins. Seminars in Cell & Developmental Biology. 20: 1055-63. PMID 19540926 DOI: 10.1016/J.Semcdb.2009.06.003  0.64
2009 Zhou H, Morgan RL, Guttman DS, Ma W. Allelic variants of the Pseudomonas syringae type III effector HopZ1 are differentially recognized by plant resistance systems. Molecular Plant-Microbe Interactions : Mpmi. 22: 176-89. PMID 19132870 DOI: 10.1094/Mpmi-22-2-0176  0.655
2008 Singh S, Stavrinides J, Christendat D, Guttman DS. A phylogenomic analysis of the shikimate dehydrogenases reveals broadscale functional diversification and identifies one functionally distinct subclass. Molecular Biology and Evolution. 25: 2221-32. PMID 18669580 DOI: 10.1093/Molbev/Msn170  0.695
2008 Ma W, Guttman DS. Evolution of prokaryotic and eukaryotic virulence effectors. Current Opinion in Plant Biology. 11: 412-9. PMID 18585954 DOI: 10.1016/J.Pbi.2008.05.001  0.657
2008 Lewis JD, Abada W, Ma W, Guttman DS, Desveaux D. The HopZ family of Pseudomonas syringae type III effectors require myristoylation for virulence and avirulence functions in Arabidopsis thaliana. Journal of Bacteriology. 190: 2880-91. PMID 18263728 DOI: 10.1128/Jb.01702-07  0.739
2008 McCann HC, Guttman DS. Evolution of the type III secretion system and its effectors in plant-microbe interactions. The New Phytologist. 177: 33-47. PMID 18078471 DOI: 10.1111/J.1469-8137.2007.02293.X  0.475
2008 Stavrinides J, McCann HC, Guttman DS. Host-pathogen interplay and the evolution of bacterial effectors. Cellular Microbiology. 10: 285-92. PMID 18034865 DOI: 10.1111/J.1462-5822.2007.01078.X  0.747
2008 Sarkar SF, Guttman DS. Evolution of the core genome of Pseudomonas syringae, a highly clonal, endemic plant pathogen (Applied and Environmental Microbiology (2004) 70, 4, (1999-2012)) Applied and Environmental Microbiology. 74: 1961. DOI: 10.1128/AEM.02553-07  0.343
2007 Wang PW, Morgan RL, Scortichini M, Guttman DS. Convergent evolution of phytopathogenic pseudomonads onto hazelnut. Microbiology (Reading, England). 153: 2067-73. PMID 17600051 DOI: 10.1099/Mic.0.2006/001545-0  0.366
2006 Ma W, Dong FF, Stavrinides J, Guttman DS. Type III effector diversification via both pathoadaptation and horizontal transfer in response to a coevolutionary arms race. Plos Genetics. 2: e209. PMID 17194219 DOI: 10.1371/Journal.Pgen.0020209  0.807
2006 Vencato M, Tian F, Alfano JR, Buell CR, Cartinhour S, DeClerck GA, Guttman DS, Stavrinides J, Joardar V, Lindeberg M, Bronstein PA, Mansfield JW, Myers CR, Collmer A, Schneider DJ. Bioinformatics-enabled identification of the HrpL regulon and type III secretion system effector proteins of Pseudomonas syringae pv. phaseolicola 1448A. Molecular Plant-Microbe Interactions : Mpmi. 19: 1193-206. PMID 17073302 DOI: 10.1094/Mpmi-19-1193  0.749
2006 Stavrinides J, Ma W, Guttman DS. Terminal reassortment drives the quantum evolution of type III effectors in bacterial pathogens. Plos Pathogens. 2: e104. PMID 17040127 DOI: 10.1371/Journal.Ppat.0020104  0.809
2006 Sarkar SF, Gordon JS, Martin GB, Guttman DS. Comparative genomics of host-specific virulence in Pseudomonas syringae. Genetics. 174: 1041-56. PMID 16951068 DOI: 10.1534/Genetics.106.060996  0.482
2006 Guttman DS, Gropp SJ, Morgan RL, Wang PW. Diversifying selection drives the evolution of the type III secretion system pilus of Pseudomonas syringae. Molecular Biology and Evolution. 23: 2342-54. PMID 16950758 DOI: 10.1093/Molbev/Msl103  0.465
2005 Hwang MS, Morgan RL, Sarkar SF, Wang PW, Guttman DS. Phylogenetic characterization of virulence and resistance phenotypes of Pseudomonas syringae. Applied and Environmental Microbiology. 71: 5182-91. PMID 16151103 DOI: 10.1128/Aem.71.9.5182-5191.2005  0.404
2005 Lindeberg M, Stavrinides J, Chang JH, Alfano JR, Collmer A, Dangl JL, Greenberg JT, Mansfield JW, Guttman DS. Proposed guidelines for a unified nomenclature and phylogenetic analysis of type III Hop effector proteins in the plant pathogen Pseudomonas syringae. Molecular Plant-Microbe Interactions : Mpmi. 18: 275-82. PMID 15828679 DOI: 10.1094/Mpmi-18-0275  0.811
2005 Ma W, Dong FFT, Stavrinides J, Guttman DS. Diversification of a Type III Effector Family via both Pathoadaptation and Horizontal Transfer in Response to a Coevolutionary Arms Race Plos Genetics. DOI: 10.1371/Journal.Pgen.0020209.Eor  0.742
2004 Gropp SJ, Guttman DS. The PCR amplification and characterization of entire Pseudomonas syringae hrp/hrc clusters. Molecular Plant Pathology. 5: 137-40. PMID 20565590 DOI: 10.1111/J.1364-3703.2004.00212.X  0.311
2004 Rohmer L, Guttman DS, Dangl JL. Diverse evolutionary mechanisms shape the type III effector virulence factor repertoire in the plant pathogen Pseudomonas syringae. Genetics. 167: 1341-60. PMID 15280247 DOI: 10.1534/Genetics.103.019638  0.499
2004 Stavrinides J, Guttman DS. Nucleotide sequence and evolution of the five-plasmid complement of the phytopathogen Pseudomonas syringae pv. maculicola ES4326. Journal of Bacteriology. 186: 5101-15. PMID 15262947 DOI: 10.1128/Jb.186.15.5101-5115.2004  0.737
2004 Sarkar SF, Guttman DS. Evolution of the core genome of Pseudomonas syringae, a highly clonal, endemic plant pathogen. Applied and Environmental Microbiology. 70: 1999-2012. PMID 15066790 DOI: 10.1128/Aem.70.4.1999-2012.2004  0.493
2004 Guttman DS. Plants as models for the study of human pathogenesis. Biotechnology Advances. 22: 363-82. PMID 15063457 DOI: 10.1016/J.Biotechadv.2003.11.001  0.428
2004 Wang PW, Chu L, Guttman DS. Complete sequence and evolutionary genomic analysis of the Pseudomonas aeruginosa transposable bacteriophage D3112. Journal of Bacteriology. 186: 400-10. PMID 14702309 DOI: 10.1128/Jb.186.2.400-410.2004  0.408
2004 Stavrinides J, Guttman DS. Mosaic evolution of the severe acute respiratory syndrome coronavirus. Journal of Virology. 78: 76-82. PMID 14671089 DOI: 10.1128/Jvi.78.1.76-82.2004  0.7
2002 Guttman DS, Vinatzer BA, Sarkar SF, Ranall MV, Kettler G, Greenberg JT. A functional screen for the type III (Hrp) secretome of the plant pathogen Pseudomonas syringae. Science (New York, N.Y.). 295: 1722-6. PMID 11872842 DOI: 10.1126/Science.295.5560.1722  0.793
2001 Guttman DS, Greenberg JT. Functional analysis of the type III effectors AvrRpt2 and AvrRpm1 of Pseudomonas syringae with the use of a single-copy genomic integration system. Molecular Plant-Microbe Interactions : Mpmi. 14: 145-55. PMID 11204777 DOI: 10.1094/Mpmi.2001.14.2.145  0.712
1999 Rate DN, Cuenca JV, Bowman GR, Guttman DS, Greenberg JT. The gain-of-function Arabidopsis acd6 mutant reveals novel regulation and function of the salicylic acid signaling pathway in controlling cell death, defenses, and cell growth. The Plant Cell. 11: 1695-708. PMID 10488236 DOI: 10.1105/Tpc.11.9.1695  0.756
1998 Guttman DS, Charlesworth D. An X-linked gene with a degenerate Y-linked homologue in a dioecious plant. Nature. 393: 263-6. PMID 9607762 DOI: 10.1038/30492  0.527
1997 Guttman DS. Recombination and clonality in natural populations of Escherichia coli. Trends in Ecology & Evolution. 12: 16-22. PMID 21237956 DOI: 10.1016/S0169-5347(96)10057-4  0.332
1997 Charlesworth B, Charlesworth D, Hnilicka J, Yu A, Guttman DS. Lack of degeneration of loci on the neo-Y chromosome of Drosophila americana americana. Genetics. 145: 989-1002. PMID 9093852  0.548
1997 Charlesworth D, Guttman DS. Seeing selection in S allele sequences. Current Biology : Cb. 7: R34-7. PMID 9072167 DOI: 10.1016/S0960-9822(06)00015-7  0.539
1996 Guttman DS, Wang PW, Wang IN, Bosler EM, Luft BJ, Dykhuizen DE. Multiple infections of Ixodes scapularis ticks by Borrelia burgdorferi as revealed by single-strand conformation polymorphism analysis. Journal of Clinical Microbiology. 34: 652-6. PMID 8904432 DOI: 10.1128/Jcm.34.3.652-656.1996  0.695
1996 Charlesworth B, Guttman DS. Reductions in genetic variation in Drosophila and E. coli caused by selection at linked sites Journal of Genetics. 75: 49-61. DOI: 10.1007/Bf02931751  0.492
1995 McGrath BC, Dunn JJ, Gorgone G, Guttman D, Dykhuizen D, Luft BJ. Identification of an immunologically important hypervariable domain of major outer surface protein A of Borrelia burgdorferi. Infection and Immunity. 63: 1356-61. PMID 7890394 DOI: 10.1128/Iai.63.4.1356-1361.1995  0.559
1994 Guttman DS, Dykhuizen DE. Clonal divergence in Escherichia coli as a result of recombination, not mutation. Science (New York, N.Y.). 266: 1380-3. PMID 7973728 DOI: 10.1126/Science.7973728  0.616
1994 Guttman DS, Dykhuizen DE. Detecting selective sweeps in naturally occurring Escherichia coli. Genetics. 138: 993-1003. PMID 7896119  0.582
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