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David S. Guttman - Publications

Affiliations: 
University of Toronto, Toronto, ON, Canada 
Area:
bacterial evolution, genomics, microbiome
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Year Citation  Score
2023 McTavish KJ, Almeida RND, Tersigni J, Raimundi MK, Gong Y, Wang PW, Gontijo GF, de Souza RM, de Resende MLV, Desveaux D, Guttman DS. Pseudomonas syringae coffee blight is associated with the horizontal transfer of plasmid-encoded type III effectors. The New Phytologist. PMID 37953378 DOI: 10.1111/nph.19364  0.33
2023 Ruiz-Bedoya T, McTavish KJ, Av-Shalom TV, Desveaux D, Guttman DS. Towards integrative plant pathology. Current Opinion in Plant Biology. 75: 102430. PMID 37542739 DOI: 10.1016/j.pbi.2023.102430  0.307
2022 Martel A, Laflamme B, Breit-McNally C, Wang P, Lonjon F, Desveaux D, Guttman DS. Metaeffector interactions modulate the type III effector-triggered immunity load of Pseudomonas syringae. Plos Pathogens. 18: e1010541. PMID 35576228 DOI: 10.1371/journal.ppat.1010541  0.326
2022 Bundalovic-Torma C, Lonjon F, Desveaux D, Guttman DS. Diversity, Evolution, and Function of Effectoromes. Annual Review of Phytopathology. PMID 35537470 DOI: 10.1146/annurev-phyto-021621-121935  0.361
2022 Breit-McNally C, Desveaux D, Guttman DS. The Arabidopsis effector-triggered immunity landscape is conserved in oilseed crops. Scientific Reports. 12: 6534. PMID 35444223 DOI: 10.1038/s41598-022-10410-w  0.333
2021 Dillon MM, Ruiz-Bedoya T, Bundalovic-Torma C, Guttman KM, Kwak H, Middleton MA, Wang PW, Horuz S, Aysan Y, Guttman DS. Comparative genomic insights into the epidemiology and virulence of plant pathogenic pseudomonads from Turkey. Microbial Genomics. 7. PMID 34227931 DOI: 10.1099/mgen.0.000585  0.398
2021 Martel A, Ruiz-Bedoya T, Breit-McNally C, Laflamme B, Desveaux D, Guttman DS. The ETS-ETI cycle: evolutionary processes and metapopulation dynamics driving the diversification of pathogen effectors and host immune factors. Current Opinion in Plant Biology. 62: 102011. PMID 33677388 DOI: 10.1016/j.pbi.2021.102011  0.34
2020 Martel A, Laflamme B, Seto D, Bastedo DP, Dillon MM, Almeida RND, Guttman DS, Desveaux D. Immunodiversity of the ZAR1 NLR Is Conveyed by Receptor-Like Cytoplasmic Kinase Sensors. Frontiers in Plant Science. 11: 1290. PMID 32983191 DOI: 10.3389/Fpls.2020.01290  0.341
2020 Isabel S, Graña-Miraglia L, Gutierrez JM, Bundalovic-Torma C, Groves HE, Isabel MR, Eshaghi A, Patel SN, Gubbay JB, Poutanen T, Guttman DS, Poutanen SM. Evolutionary and structural analyses of SARS-CoV-2 D614G spike protein mutation now documented worldwide. Scientific Reports. 10: 14031. PMID 32820179 DOI: 10.1038/S41598-020-70827-Z  0.368
2020 Vázquez-Rosas-Landa M, Ponce-Soto GY, Aguirre-Liguori JA, Thakur S, Scheinvar E, Barrera-Redondo J, Ibarra-Laclette E, Guttman DS, Eguiarte LE, Souza V. Population genomics of Vibrionaceae isolated from an endangered oasis reveals local adaptation after an environmental perturbation. Bmc Genomics. 21: 418. PMID 32571204 DOI: 10.1186/S12864-020-06829-Y  0.793
2020 Laflamme B, Dillon MM, Martel A, Almeida RND, Desveaux D, Guttman DS. The pan-genome effector-triggered immunity landscape of a host-pathogen interaction. Science (New York, N.Y.). 367: 763-768. PMID 32054757 DOI: 10.1126/Science.Aax4079  0.487
2020 Zou A, Nadeau K, Wang PW, Lee JY, Guttman DS, Sharif S, Korver DR, Brumell JH, Parkinson J. Accumulation of genetic variants associated with immunity in the selective breeding of broilers. Bmc Genetics. 21: 5. PMID 31952471 DOI: 10.1186/S12863-020-0807-Z  0.304
2019 Martel A, Lo T, Desveaux D, Guttman DS. A high-throughput, seedling screen for plant immunity. Molecular Plant-Microbe Interactions : Mpmi. PMID 31851574 DOI: 10.1094/Mpmi-10-19-0295-Ta  0.45
2019 Bastedo DP, Khan M, Martel A, Seto D, Kireeva I, Zhang J, Masud W, Millar D, Lee JY, Lee AH, Gong Y, Santos-Severino A, Guttman DS, Desveaux D. Perturbations of the ZED1 pseudokinase activate plant immunity. Plos Pathogens. 15: e1007900. PMID 31269090 DOI: 10.1371/Journal.Ppat.1007900  0.376
2019 Bastedo DP, Lo T, Laflamme B, Desveaux D, Guttman DS. Diversity and Evolution of Type III Secreted Effectors: A Case Study of Three Families. Current Topics in Microbiology and Immunology. PMID 31240408 DOI: 10.1007/82_2019_165  0.441
2019 Dillon MM, Almeida RND, Laflamme B, Martel A, Weir BS, Desveaux D, Guttman DS. Molecular Evolution of Type III Secreted Effector Proteins. Frontiers in Plant Science. 10: 418. PMID 31024592 DOI: 10.3389/Fpls.2019.00418  0.506
2019 Mott GA, Smakowska-Luzan E, Pasha A, Parys K, Howton TC, Neuhold J, Lehner A, Grünwald K, Stolt-Bergner P, Provart NJ, Mukhtar MS, Desveaux D, Guttman DS, Belkhadir Y. Map of physical interactions between extracellular domains of Arabidopsis leucine-rich repeat receptor kinases. Scientific Data. 6: 190025. PMID 30806640 DOI: 10.1038/Sdata.2019.25  0.318
2019 Dillon MM, Thakur S, Almeida RND, Wang PW, Weir BS, Guttman DS. Recombination of ecologically and evolutionarily significant loci maintains genetic cohesion in the Pseudomonas syringae species complex. Genome Biology. 20: 3. PMID 30606234 DOI: 10.1186/S13059-018-1606-Y  0.8
2018 Huei-Yi Lee A, Bastedo DP, Youn JY, Lo T, Middleton MA, Kireeva I, Lee JY, Sharifpoor S, Baryshnikova A, Zhang J, Wang PW, Peisajovich SG, Costanzo M, Andrews BJ, Boone CM, ... ... Guttman DS, et al. Identifying Type III Secreted Effector Function via a Yeast Genomic Screen. G3 (Bethesda, Md.). PMID 30573466 DOI: 10.1534/G3.118.200877  0.463
2018 Popovic A, Bourdon C, Wang PW, Guttman DS, Voskuijl W, Grigg ME, Bandsma RHJ, Parkinson J. Design and application of a novel two-amplicon approach for defining eukaryotic microbiota. Microbiome. 6: 228. PMID 30572961 DOI: 10.1186/S40168-018-0612-3  0.318
2018 Diaz Caballero J, Clark ST, Wang PW, Donaldson SL, Coburn B, Tullis DE, Yau YCW, Waters VJ, Hwang DM, Guttman DS. A genome-wide association analysis reveals a potential role for recombination in the evolution of antimicrobial resistance in Burkholderia multivorans. Plos Pathogens. 14: e1007453. PMID 30532201 DOI: 10.1371/Journal.Ppat.1007453  0.358
2018 Layeghifard M, Hwang DM, Guttman DS. Constructing and Analyzing Microbiome Networks in R. Methods in Molecular Biology (Clifton, N.J.). 1849: 243-266. PMID 30298259 DOI: 10.1007/978-1-4939-8728-3_16  0.309
2018 Fitzpatrick CR, Lu-Irving P, Copeland J, Guttman DS, Wang PW, Baltrus DA, Dlugosch KM, Johnson MTJ. Chloroplast sequence variation and the efficacy of peptide nucleic acids for blocking host amplification in plant microbiome studies. Microbiome. 6: 144. PMID 30121081 DOI: 10.1186/S40168-018-0534-0  0.415
2018 Sheppard SK, Guttman DS, Fitzgerald JR. Population genomics of bacterial host adaptation. Nature Reviews. Genetics. PMID 29973680 DOI: 10.1038/S41576-018-0032-Z  0.43
2018 Gritsunov A, Peek J, Diaz Caballero J, Guttman D, Christendat D. Structural and biochemical approaches uncover multiple evolutionary trajectories of plant quinate dehydrogenases. The Plant Journal : For Cell and Molecular Biology. PMID 29890023 DOI: 10.2210/Pdb6Bmq/Pdb  0.386
2018 Turpin W, Bedrani L, Espin-Garcia O, Xu W, Silverberg MS, Smith MI, Guttman DS, Griffiths A, Moayyedi P, Panaccione R, Huynh H, Steinhart H, Aumais G, Shestopaloff K, Dieleman LA, et al. FUT2 genotype and secretory status are not associated with fecal microbial composition and inferred function in healthy subjects. Gut Microbes. 1-24. PMID 29533703 DOI: 10.1080/19490976.2018.1445956  0.327
2018 Clark ST, Guttman DS, Hwang DM. Diversification of Pseudomonas aeruginosa within the cystic fibrosis lung and its effects on antibiotic resistance. Fems Microbiology Letters. PMID 29401362 DOI: 10.1093/Femsle/Fny026  0.381
2018 Fitzpatrick CR, Copeland J, Wang PW, Guttman DS, Kotanen PM, Johnson MTJ. Assembly and ecological function of the root microbiome across angiosperm plant species. Proceedings of the National Academy of Sciences of the United States of America. PMID 29358405 DOI: 10.1073/Pnas.1717617115  0.412
2018 Smakowska-Luzan E, Mott GA, Parys K, Stegmann M, Howton TC, Layeghifard M, Neuhold J, Lehner A, Kong J, Grünwald K, Weinberger N, Satbhai SB, Mayer D, Busch W, Madalinski M, ... ... Guttman DS, et al. An extracellular network of Arabidopsis leucine-rich repeat receptor kinases. Nature. PMID 29320478 DOI: 10.1038/Nature25184  0.316
2017 Mott GA, Desveaux D, Guttman DS. A high-sensitivity, microtiter-based plate assay for plant MAMP-triggered immunity. Molecular Plant-Microbe Interactions : Mpmi. PMID 29199888 DOI: 10.1094/Mpmi-11-17-0279-Ta  0.392
2017 Assis RAB, Polloni LC, Patané JSL, Thakur S, Felestrino ÉB, Diaz-Caballero J, Digiampietri LA, Goulart LR, Almeida NF, Nascimento R, Dandekar AM, Zaini PA, Setubal JC, Guttman DS, Moreira LM. Identification and analysis of seven effector protein families with different adaptive and evolutionary histories in plant-associated members of the Xanthomonadaceae. Scientific Reports. 7: 16133. PMID 29170530 DOI: 10.1038/S41598-017-16325-1  0.816
2017 Gong Y, Desveaux D, Guttman DS, Lewis JD. A Practical Guide to Quantitative Interactor Screening with Next-Generation Sequencing (QIS-Seq). Methods in Molecular Biology (Clifton, N.J.). 1613: 1-20. PMID 28849555 DOI: 10.1007/978-1-4939-7027-8_1  0.534
2017 Shrestha SD, Guttman DS, Perron GG. Draft Genome Sequences of 10 Environmental Pseudomonas aeruginosa Strains Isolated from Soils, Sediments, and Waters. Genome Announcements. 5. PMID 28839021 DOI: 10.1128/Genomea.00804-17  0.35
2017 Seto D, Koulena N, Lo T, Menna A, Guttman DS, Desveaux D. Expanded type III effector recognition by the ZAR1 NLR protein using ZED1-related kinases. Nature Plants. 3: 17027. PMID 28288096 DOI: 10.1038/Nplants.2017.27  0.368
2017 Mott GA, Guttman DS, Desveaux D. The study of pattern-triggered immunity in Arabidopsis Canadian Journal of Plant Pathology. 39: 275-281. DOI: 10.1080/07060661.2017.1355850  0.38
2016 Laflamme B, Middleton M, Lo T, Desveaux D, Guttman DS. Image-Based Quantification of Plant Immunity and Disease. Molecular Plant-Microbe Interactions : Mpmi. MPMI07160129TA. PMID 27996374 DOI: 10.1094/Mpmi-07-16-0129-Ta  0.35
2016 Baltrus DA, McCann HC, Guttman DS. Evolution, Genomics and Epidemiology of Pseudomonas syringae. Molecular Plant Pathology. PMID 27798954 DOI: 10.1111/Mpp.12506  0.417
2016 Yan D, Easwaran V, Chau V, Okamoto M, Ierullo M, Kimura M, Endo A, Yano R, Pasha A, Gong Y, Bi YM, Provart N, Guttman D, Krapp A, Rothstein SJ, et al. NIN-like protein 8 is a master regulator of nitrate-promoted seed germination in Arabidopsis. Nature Communications. 7: 13179. PMID 27731416 DOI: 10.1038/Ncomms13179  0.313
2016 Turpin W, Espin-Garcia O, Xu W, Silverberg MS, Kevans D, Smith MI, Guttman DS, Griffiths A, Panaccione R, Otley A, Xu L, Shestopaloff K, Moreno-Hagelsieb G, Paterson AD, et al. Association of host genome with intestinal microbial composition in a large healthy cohort. Nature Genetics. PMID 27694960 DOI: 10.1038/Ng.3693  0.343
2016 Waese J, Pasha A, Wang T, van Weringh A, Guttman DS, Provart NJ. Gene Slider: Sequence Logo Interactive Data-visualization for Education and Research. Bioinformatics (Oxford, England). PMID 27522081 DOI: 10.1093/Bioinformatics/Btw525  0.305
2016 Thakur S, Guttman DS. A De-Novo Genome Analysis Pipeline (DeNoGAP) for large-scale comparative prokaryotic genomics studies. Bmc Bioinformatics. 17: 260. PMID 27363390 DOI: 10.1186/S12859-016-1142-2  0.784
2016 Bondy-Denomy J, Qian J, Westra ER, Buckling A, Guttman DS, Davidson AR, Maxwell KL. Prophages mediate defense against phage infection through diverse mechanisms. The Isme Journal. PMID 27258950 DOI: 10.1038/Ismej.2016.79  0.401
2016 Mott GA, Thakur S, Smakowska E, Wang PW, Belkhadir Y, Desveaux D, Guttman DS. Genomic screens identify a new phytobacterial microbe-associated molecular pattern and the cognate Arabidopsis receptor-like kinase that mediates its immune elicitation. Genome Biology. 17: 98. PMID 27160854 DOI: 10.1186/S13059-016-0955-7  0.793
2016 Lo T, Koulena N, Seto D, Guttman DS, Desveaux D. The HopF family of Pseudomonas syringae type III secreted effectors. Molecular Plant Pathology. PMID 27061875 DOI: 10.1111/Mpp.12412  0.414
2016 Thakur S, Weir BS, Guttman DS. Phytopathogen Genome Announcement: Draft Genome Sequences of 62 Pseudomonas syringae Type and Pathotype Strains. Molecular Plant-Microbe Interactions : Mpmi. MPMI01160013TA. PMID 26883489 DOI: 10.1094/Mpmi-01-16-0013-Ta  0.805
2015 Sistrom M, Park D, O'Brien HE, Wang Z, Guttman DS, Townsend JP, Turner PE. Genomic and Gene-Expression Comparisons among Phage-Resistant Type-IV Pilus Mutants of Pseudomonas syringae pathovar phaseolicola. Plos One. 10: e0144514. PMID 26670219 DOI: 10.1371/Journal.Pone.0144514  0.404
2015 Menna A, Nguyen D, Guttman DS, Desveaux D. Elevated Temperature Differentially Influences Effector-Triggered Immunity Outputs in Arabidopsis. Frontiers in Plant Science. 6: 995. PMID 26617631 DOI: 10.3389/Fpls.2015.00995  0.425
2015 Kim SH, Clark ST, Surendra A, Copeland JK, Wang PW, Ammar R, Collins C, Tullis DE, Nislow C, Hwang DM, Guttman DS, Cowen LE. Global Analysis of the Fungal Microbiome in Cystic Fibrosis Patients Reveals Loss of Function of the Transcriptional Repressor Nrg1 as a Mechanism of Pathogen Adaptation. Plos Pathogens. 11: e1005308. PMID 26588216 DOI: 10.1371/Journal.Ppat.1005308  0.399
2015 Diaz Caballero J, Clark ST, Coburn B, Zhang Y, Wang PW, Donaldson SL, Tullis DE, Yau YC, Waters VJ, Hwang DM, Guttman DS. Selective Sweeps and Parallel Pathoadaptation Drive Pseudomonas aeruginosa Evolution in the Cystic Fibrosis Lung. Mbio. 6: e00981-15. PMID 26330513 DOI: 10.1128/Mbio.00981-15  0.384
2015 Trantas EA, Licciardello G, Almeida NF, Witek K, Strano CP, Duxbury Z, Ververidis F, Goumas DE, Jones JD, Guttman DS, Catara V, Sarris PF. Comparative genomic analysis of multiple strains of two unusual plant pathogens: Pseudomonas corrugata and Pseudomonas mediterranea. Frontiers in Microbiology. 6: 811. PMID 26300874 DOI: 10.3389/Fmicb.2015.00811  0.491
2015 Clark ST, Diaz Caballero J, Cheang M, Coburn B, Wang PW, Donaldson SL, Zhang Y, Liu M, Keshavjee S, Yau YC, Waters VJ, Elizabeth Tullis D, Guttman DS, Hwang DM. Phenotypic diversity within a Pseudomonas aeruginosa population infecting an adult with cystic fibrosis. Scientific Reports. 5: 10932. PMID 26047320 DOI: 10.1038/Srep10932  0.309
2015 Copeland JK, Yuan L, Layeghifard M, Wang PW, Guttman DS. Seasonal community succession of the phyllosphere microbiome. Molecular Plant-Microbe Interactions : Mpmi. 28: 274-85. PMID 25679538 DOI: 10.1094/Mpmi-10-14-0331-Fi  0.338
2015 Azad MB, Konya T, Guttman DS, Field CJ, Sears MR, HayGlass KT, Mandhane PJ, Turvey SE, Subbarao P, Becker AB, Scott JA, Kozyrskyj AL. Infant gut microbiota and food sensitization: associations in the first year of life. Clinical and Experimental Allergy : Journal of the British Society For Allergy and Clinical Immunology. 45: 632-43. PMID 25599982 DOI: 10.1111/Cea.12487  0.323
2014 Lewis JD, Wilton M, Mott GA, Lu W, Hassan JA, Guttman DS, Desveaux D. Immunomodulation by the Pseudomonas syringae HopZ type III effector family in Arabidopsis. Plos One. 9: e116152. PMID 25546415 DOI: 10.1371/Journal.Pone.0116152  0.612
2014 Hurley B, Subramaniam R, Guttman DS, Desveaux D. Proteomics of effector-triggered immunity (ETI) in plants. Virulence. 5: 752-60. PMID 25513776 DOI: 10.4161/Viru.36329  0.405
2014 Mott GA, Middleton MA, Desveaux D, Guttman DS. Peptides and small molecules of the plant-pathogen apoplastic arena. Frontiers in Plant Science. 5: 677. PMID 25506352 DOI: 10.3389/Fpls.2014.00677  0.418
2014 Hurley B, Lee D, Mott A, Wilton M, Liu J, Liu YC, Angers S, Coaker G, Guttman DS, Desveaux D. The Pseudomonas syringae type III effector HopF2 suppresses Arabidopsis stomatal immunity. Plos One. 9: e114921. PMID 25503437 DOI: 10.1371/Journal.Pone.0114921  0.37
2014 Guttman DS, McHardy AC, Schulze-Lefert P. Microbial genome-enabled insights into plant-microorganism interactions. Nature Reviews. Genetics. 15: 797-813. PMID 25266034 DOI: 10.1038/Nrg3748  0.438
2014 Konya T, Koster B, Maughan H, Escobar M, Azad MB, Guttman DS, Sears MR, Becker AB, Brook JR, Takaro TK, Kozyrskyj AL, Scott JA. Associations between bacterial communities of house dust and infant gut. Environmental Research. 131: 25-30. PMID 24637181 DOI: 10.1016/J.Envres.2014.02.005  0.323
2014 Üstün S, König P, Guttman DS, Börnke F. HopZ4 from Pseudomonas syringae, a member of the HopZ type III effector family from the YopJ superfamily, inhibits the proteasome in plants. Molecular Plant-Microbe Interactions : Mpmi. 27: 611-23. PMID 24625030 DOI: 10.1094/Mpmi-12-13-0363-R  0.415
2014 Lewis JD, Lo T, Bastedo P, Guttman DS, Desveaux D. The rise of the undead: pseudokinases as mediators of effector-triggered immunity. Plant Signaling & Behavior. 9: e27563. PMID 24398910 DOI: 10.4161/Psb.27563  0.629
2014 Austin RS, Chatfield SP, Desveaux D, Guttman DS. Next-generation mapping of genetic mutations using bulk population sequencing. Methods in Molecular Biology (Clifton, N.J.). 1062: 301-15. PMID 24057374 DOI: 10.1007/978-1-62703-580-4_17  0.559
2013 Lewis JD, Lee AH, Hassan JA, Wan J, Hurley B, Jhingree JR, Wang PW, Lo T, Youn JY, Guttman DS, Desveaux D. The Arabidopsis ZED1 pseudokinase is required for ZAR1-mediated immunity induced by the Pseudomonas syringae type III effector HopZ1a. Proceedings of the National Academy of Sciences of the United States of America. 110: 18722-7. PMID 24170858 DOI: 10.1073/Pnas.1315520110  0.642
2013 McCann HC, Rikkerink EH, Bertels F, Fiers M, Lu A, Rees-George J, Andersen MT, Gleave AP, Haubold B, Wohlers MW, Guttman DS, Wang PW, Straub C, Vanneste JL, Vanneste J, et al. Genomic analysis of the Kiwifruit pathogen Pseudomonas syringae pv. actinidiae provides insight into the origins of an emergent plant disease. Plos Pathogens. 9: e1003503. PMID 23935484 DOI: 10.1371/Journal.Ppat.1003503  0.452
2013 Zhou Z, McCann A, Litrup E, Murphy R, Cormican M, Fanning S, Brown D, Guttman DS, Brisse S, Achtman M. Neutral genomic microevolution of a recently emerged pathogen, Salmonella enterica serovar Agona. Plos Genetics. 9: e1003471. PMID 23637636 DOI: 10.1371/Journal.Pgen.1003471  0.436
2013 Lee AH, Middleton MA, Guttman DS, Desveaux D. Phytopathogen type III effectors as probes of biological systems. Microbial Biotechnology. 6: 230-40. PMID 23433088 DOI: 10.1111/1751-7915.12042  0.439
2012 Schreiber KJ, Austin RS, Gong Y, Zhang J, Fung P, Wang PW, Guttman DS, Desveaux D. Forward chemical genetic screens in Arabidopsis identify genes that influence sensitivity to the phytotoxic compound sulfamethoxazole. Bmc Plant Biology. 12: 226. PMID 23176361 DOI: 10.1186/1471-2229-12-226  0.576
2012 Maughan H, Wang PW, Diaz Caballero J, Fung P, Gong Y, Donaldson SL, Yuan L, Keshavjee S, Zhang Y, Yau YC, Waters VJ, Tullis DE, Hwang DM, Guttman DS. Analysis of the cystic fibrosis lung microbiota via serial Illumina sequencing of bacterial 16S rRNA hypervariable regions. Plos One. 7: e45791. PMID 23056217 DOI: 10.1371/Journal.Pone.0045791  0.317
2012 Waters V, Zlosnik JE, Yau YC, Speert DP, Aaron SD, Guttman DS. Comparison of three typing methods for Pseudomonas aeruginosa isolates from patients with cystic fibrosis. European Journal of Clinical Microbiology & Infectious Diseases : Official Publication of the European Society of Clinical Microbiology. 31: 3341-50. PMID 22843295 DOI: 10.1007/S10096-012-1701-Z  0.301
2012 O'Brien HE, Thakur S, Gong Y, Fung P, Zhang J, Yuan L, Wang PW, Yong C, Scortichini M, Guttman DS. Extensive remodeling of the Pseudomonas syringae pv. avellanae type III secretome associated with two independent host shifts onto hazelnut. Bmc Microbiology. 12: 141. PMID 22800299 DOI: 10.1186/1471-2180-12-141  0.825
2012 Mazzaglia A, Studholme DJ, Taratufolo MC, Cai R, Almeida NF, Goodman T, Guttman DS, Vinatzer BA, Balestra GM. Pseudomonas syringae pv. actinidiae (PSA) isolates from recent bacterial canker of kiwifruit outbreaks belong to the same genetic lineage. Plos One. 7: e36518. PMID 22590555 DOI: 10.1371/Journal.Pone.0036518  0.65
2012 McCann HC, Nahal H, Thakur S, Guttman DS. Identification of innate immunity elicitors using molecular signatures of natural selection. Proceedings of the National Academy of Sciences of the United States of America. 109: 4215-20. PMID 22323605 DOI: 10.1073/Pnas.1113893109  0.802
2012 Lee AH, Hurley B, Felsensteiner C, Yea C, Ckurshumova W, Bartetzko V, Wang PW, Quach V, Lewis JD, Liu YC, Börnke F, Angers S, Wilde A, Guttman DS, Desveaux D. A bacterial acetyltransferase destroys plant microtubule networks and blocks secretion. Plos Pathogens. 8: e1002523. PMID 22319451 DOI: 10.1371/Journal.Ppat.1002523  0.592
2012 Lewis JD, Wan J, Ford R, Gong Y, Fung P, Nahal H, Wang PW, Desveaux D, Guttman DS. Quantitative Interactor Screening with next-generation Sequencing (QIS-Seq) identifies Arabidopsis thaliana MLO2 as a target of the Pseudomonas syringae type III effector HopZ2. Bmc Genomics. 13: 8. PMID 22230763 DOI: 10.1186/1471-2164-13-8  0.569
2012 Stavrinides J, Kirzinger MW, Beasley FC, Guttman DS. E622, a miniature, virulence-associated mobile element. Journal of Bacteriology. 194: 509-17. PMID 22081398 DOI: 10.1128/Jb.06211-11  0.712
2012 Sohn KH, Saucet SB, Clarke CR, Vinatzer BA, O'Brien HE, Guttman DS, Jones JD. HopAS1 recognition significantly contributes to Arabidopsis nonhost resistance to Pseudomonas syringae pathogens. The New Phytologist. 193: 58-66. PMID 22053875 DOI: 10.1111/J.1469-8137.2011.03950.X  0.694
2011 O'Brien HE, Gong Y, Fung P, Wang PW, Guttman DS. Use of low-coverage, large-insert, short-read data for rapid and accurate generation of enhanced-quality draft Pseudomonas genome sequences. Plos One. 6: e27199. PMID 22073286 DOI: 10.1371/Journal.Pone.0027199  0.369
2011 Lewis JD, Lee A, Ma W, Zhou H, Guttman DS, Desveaux D. The YopJ superfamily in plant-associated bacteria. Molecular Plant Pathology. 12: 928-37. PMID 21726386 DOI: 10.1111/J.1364-3703.2011.00719.X  0.742
2011 O'Brien HE, Thakur S, Guttman DS. Evolution of plant pathogenesis in Pseudomonas syringae: a genomics perspective. Annual Review of Phytopathology. 49: 269-89. PMID 21568703 DOI: 10.1146/Annurev-Phyto-072910-095242  0.827
2011 Austin RS, Vidaurre D, Stamatiou G, Breit R, Provart NJ, Bonetta D, Zhang J, Fung P, Gong Y, Wang PW, McCourt P, Guttman DS. Next-generation mapping of Arabidopsis genes. The Plant Journal : For Cell and Molecular Biology. 67: 715-25. PMID 21518053 DOI: 10.1111/J.1365-313X.2011.04619.X  0.557
2011 MacDonald J, Doering M, Canam T, Gong Y, Guttman DS, Campbell MM, Master ER. Transcriptomic responses of the softwood-degrading white-rot fungus Phanerochaete carnosa during growth on coniferous and deciduous wood. Applied and Environmental Microbiology. 77: 3211-8. PMID 21441342 DOI: 10.1128/Aem.02490-10  0.307
2011 O'Brien HE, Desveaux D, Guttman DS. Next-generation genomics of Pseudomonas syringae. Current Opinion in Microbiology. 14: 24-30. PMID 21233007 DOI: 10.1016/J.Mib.2010.12.007  0.479
2010 Anderson JB, Funt J, Thompson DA, Prabhu S, Socha A, Sirjusingh C, Dettman JR, Parreiras L, Guttman DS, Regev A, Kohn LM. Determinants of divergent adaptation and Dobzhansky-Muller interaction in experimental yeast populations. Current Biology : Cb. 20: 1383-8. PMID 20637622 DOI: 10.1016/J.Cub.2010.06.022  0.346
2010 Lewis JD, Wu R, Guttman DS, Desveaux D. Allele-specific virulence attenuation of the Pseudomonas syringae HopZ1a type III effector via the Arabidopsis ZAR1 resistance protein. Plos Genetics. 6: e1000894. PMID 20368970 DOI: 10.1371/Journal.Pgen.1000894  0.593
2010 Almeida NF, Yan S, Cai R, Clarke CR, Morris CE, Schaad NW, Schuenzel EL, Lacy GH, Sun X, Jones JB, Castillo JA, Bull CT, Leman S, Guttman DS, Setubal JC, et al. PAMDB, a multilocus sequence typing and analysis database and website for plant-associated microbes. Phytopathology. 100: 208-15. PMID 20128693 DOI: 10.1094/Phyto-100-3-0208  0.751
2010 Clarke CR, Cai R, Studholme DJ, Guttman DS, Vinatzer BA. Pseudomonas syringae strains naturally lacking the classical P. syringae hrp/hrc Locus are common leaf colonizers equipped with an atypical type III secretion system. Molecular Plant-Microbe Interactions : Mpmi. 23: 198-210. PMID 20064063 DOI: 10.1094/Mpmi-23-2-0198  0.654
2010 Guttman DS, Stavrinides J. Population Genomics of Bacteria Bacterial Population Genetics in Infectious Disease. 121-151. DOI: 10.1002/9780470600122.ch7  0.676
2009 Guttman DS. Bacterial evolution: dynamic genomes and the power of transformation. Current Biology : Cb. 19: R857-9. PMID 19788881 DOI: 10.1016/J.Cub.2009.08.007  0.414
2009 Lewis JD, Guttman DS, Desveaux D. The targeting of plant cellular systems by injected type III effector proteins. Seminars in Cell & Developmental Biology. 20: 1055-63. PMID 19540926 DOI: 10.1016/J.Semcdb.2009.06.003  0.637
2009 Zhou H, Morgan RL, Guttman DS, Ma W. Allelic variants of the Pseudomonas syringae type III effector HopZ1 are differentially recognized by plant resistance systems. Molecular Plant-Microbe Interactions : Mpmi. 22: 176-89. PMID 19132870 DOI: 10.1094/Mpmi-22-2-0176  0.646
2008 Singh S, Stavrinides J, Christendat D, Guttman DS. A phylogenomic analysis of the shikimate dehydrogenases reveals broadscale functional diversification and identifies one functionally distinct subclass. Molecular Biology and Evolution. 25: 2221-32. PMID 18669580 DOI: 10.1093/Molbev/Msn170  0.692
2008 Ma W, Guttman DS. Evolution of prokaryotic and eukaryotic virulence effectors. Current Opinion in Plant Biology. 11: 412-9. PMID 18585954 DOI: 10.1016/J.Pbi.2008.05.001  0.648
2008 Lewis JD, Abada W, Ma W, Guttman DS, Desveaux D. The HopZ family of Pseudomonas syringae type III effectors require myristoylation for virulence and avirulence functions in Arabidopsis thaliana. Journal of Bacteriology. 190: 2880-91. PMID 18263728 DOI: 10.1128/Jb.01702-07  0.733
2008 McCann HC, Guttman DS. Evolution of the type III secretion system and its effectors in plant-microbe interactions. The New Phytologist. 177: 33-47. PMID 18078471 DOI: 10.1111/J.1469-8137.2007.02293.X  0.474
2008 Stavrinides J, McCann HC, Guttman DS. Host-pathogen interplay and the evolution of bacterial effectors. Cellular Microbiology. 10: 285-92. PMID 18034865 DOI: 10.1111/J.1462-5822.2007.01078.X  0.744
2008 Sarkar SF, Guttman DS. Evolution of the core genome of Pseudomonas syringae, a highly clonal, endemic plant pathogen (Applied and Environmental Microbiology (2004) 70, 4, (1999-2012)) Applied and Environmental Microbiology. 74: 1961. DOI: 10.1128/AEM.02553-07  0.342
2007 Wang PW, Morgan RL, Scortichini M, Guttman DS. Convergent evolution of phytopathogenic pseudomonads onto hazelnut. Microbiology (Reading, England). 153: 2067-73. PMID 17600051 DOI: 10.1099/Mic.0.2006/001545-0  0.366
2006 Ma W, Dong FF, Stavrinides J, Guttman DS. Type III effector diversification via both pathoadaptation and horizontal transfer in response to a coevolutionary arms race. Plos Genetics. 2: e209. PMID 17194219 DOI: 10.1371/Journal.Pgen.0020209  0.803
2006 Vencato M, Tian F, Alfano JR, Buell CR, Cartinhour S, DeClerck GA, Guttman DS, Stavrinides J, Joardar V, Lindeberg M, Bronstein PA, Mansfield JW, Myers CR, Collmer A, Schneider DJ. Bioinformatics-enabled identification of the HrpL regulon and type III secretion system effector proteins of Pseudomonas syringae pv. phaseolicola 1448A. Molecular Plant-Microbe Interactions : Mpmi. 19: 1193-206. PMID 17073302 DOI: 10.1094/Mpmi-19-1193  0.746
2006 Stavrinides J, Ma W, Guttman DS. Terminal reassortment drives the quantum evolution of type III effectors in bacterial pathogens. Plos Pathogens. 2: e104. PMID 17040127 DOI: 10.1371/Journal.Ppat.0020104  0.804
2006 Sarkar SF, Gordon JS, Martin GB, Guttman DS. Comparative genomics of host-specific virulence in Pseudomonas syringae. Genetics. 174: 1041-56. PMID 16951068 DOI: 10.1534/Genetics.106.060996  0.482
2006 Guttman DS, Gropp SJ, Morgan RL, Wang PW. Diversifying selection drives the evolution of the type III secretion system pilus of Pseudomonas syringae. Molecular Biology and Evolution. 23: 2342-54. PMID 16950758 DOI: 10.1093/Molbev/Msl103  0.464
2005 Hwang MS, Morgan RL, Sarkar SF, Wang PW, Guttman DS. Phylogenetic characterization of virulence and resistance phenotypes of Pseudomonas syringae. Applied and Environmental Microbiology. 71: 5182-91. PMID 16151103 DOI: 10.1128/Aem.71.9.5182-5191.2005  0.404
2005 Lindeberg M, Stavrinides J, Chang JH, Alfano JR, Collmer A, Dangl JL, Greenberg JT, Mansfield JW, Guttman DS. Proposed guidelines for a unified nomenclature and phylogenetic analysis of type III Hop effector proteins in the plant pathogen Pseudomonas syringae. Molecular Plant-Microbe Interactions : Mpmi. 18: 275-82. PMID 15828679 DOI: 10.1094/Mpmi-18-0275  0.809
2005 Ma W, Dong FFT, Stavrinides J, Guttman DS. Diversification of a Type III Effector Family via both Pathoadaptation and Horizontal Transfer in Response to a Coevolutionary Arms Race Plos Genetics. DOI: 10.1371/Journal.Pgen.0020209.Eor  0.736
2004 Gropp SJ, Guttman DS. The PCR amplification and characterization of entire Pseudomonas syringae hrp/hrc clusters. Molecular Plant Pathology. 5: 137-40. PMID 20565590 DOI: 10.1111/J.1364-3703.2004.00212.X  0.311
2004 Rohmer L, Guttman DS, Dangl JL. Diverse evolutionary mechanisms shape the type III effector virulence factor repertoire in the plant pathogen Pseudomonas syringae. Genetics. 167: 1341-60. PMID 15280247 DOI: 10.1534/Genetics.103.019638  0.497
2004 Stavrinides J, Guttman DS. Nucleotide sequence and evolution of the five-plasmid complement of the phytopathogen Pseudomonas syringae pv. maculicola ES4326. Journal of Bacteriology. 186: 5101-15. PMID 15262947 DOI: 10.1128/Jb.186.15.5101-5115.2004  0.734
2004 Sarkar SF, Guttman DS. Evolution of the core genome of Pseudomonas syringae, a highly clonal, endemic plant pathogen. Applied and Environmental Microbiology. 70: 1999-2012. PMID 15066790 DOI: 10.1128/Aem.70.4.1999-2012.2004  0.493
2004 Guttman DS. Plants as models for the study of human pathogenesis. Biotechnology Advances. 22: 363-82. PMID 15063457 DOI: 10.1016/J.Biotechadv.2003.11.001  0.427
2004 Wang PW, Chu L, Guttman DS. Complete sequence and evolutionary genomic analysis of the Pseudomonas aeruginosa transposable bacteriophage D3112. Journal of Bacteriology. 186: 400-10. PMID 14702309 DOI: 10.1128/Jb.186.2.400-410.2004  0.407
2004 Stavrinides J, Guttman DS. Mosaic evolution of the severe acute respiratory syndrome coronavirus. Journal of Virology. 78: 76-82. PMID 14671089 DOI: 10.1128/Jvi.78.1.76-82.2004  0.696
2002 Guttman DS, Vinatzer BA, Sarkar SF, Ranall MV, Kettler G, Greenberg JT. A functional screen for the type III (Hrp) secretome of the plant pathogen Pseudomonas syringae. Science (New York, N.Y.). 295: 1722-6. PMID 11872842 DOI: 10.1126/Science.295.5560.1722  0.791
2001 Guttman DS, Greenberg JT. Functional analysis of the type III effectors AvrRpt2 and AvrRpm1 of Pseudomonas syringae with the use of a single-copy genomic integration system. Molecular Plant-Microbe Interactions : Mpmi. 14: 145-55. PMID 11204777 DOI: 10.1094/Mpmi.2001.14.2.145  0.71
1999 Rate DN, Cuenca JV, Bowman GR, Guttman DS, Greenberg JT. The gain-of-function Arabidopsis acd6 mutant reveals novel regulation and function of the salicylic acid signaling pathway in controlling cell death, defenses, and cell growth. The Plant Cell. 11: 1695-708. PMID 10488236 DOI: 10.1105/Tpc.11.9.1695  0.756
1998 Guttman DS, Charlesworth D. An X-linked gene with a degenerate Y-linked homologue in a dioecious plant. Nature. 393: 263-6. PMID 9607762 DOI: 10.1038/30492  0.526
1997 Guttman DS. Recombination and clonality in natural populations of Escherichia coli. Trends in Ecology & Evolution. 12: 16-22. PMID 21237956 DOI: 10.1016/S0169-5347(96)10057-4  0.332
1997 Charlesworth B, Charlesworth D, Hnilicka J, Yu A, Guttman DS. Lack of degeneration of loci on the neo-Y chromosome of Drosophila americana americana. Genetics. 145: 989-1002. PMID 9093852  0.547
1997 Charlesworth D, Guttman DS. Seeing selection in S allele sequences. Current Biology : Cb. 7: R34-7. PMID 9072167 DOI: 10.1016/S0960-9822(06)00015-7  0.538
1996 Guttman DS, Wang PW, Wang IN, Bosler EM, Luft BJ, Dykhuizen DE. Multiple infections of Ixodes scapularis ticks by Borrelia burgdorferi as revealed by single-strand conformation polymorphism analysis. Journal of Clinical Microbiology. 34: 652-6. PMID 8904432 DOI: 10.1128/Jcm.34.3.652-656.1996  0.695
1996 Charlesworth B, Guttman DS. Reductions in genetic variation in Drosophila and E. coli caused by selection at linked sites Journal of Genetics. 75: 49-61. DOI: 10.1007/Bf02931751  0.492
1995 McGrath BC, Dunn JJ, Gorgone G, Guttman D, Dykhuizen D, Luft BJ. Identification of an immunologically important hypervariable domain of major outer surface protein A of Borrelia burgdorferi. Infection and Immunity. 63: 1356-61. PMID 7890394 DOI: 10.1128/Iai.63.4.1356-1361.1995  0.559
1994 Guttman DS, Dykhuizen DE. Clonal divergence in Escherichia coli as a result of recombination, not mutation. Science (New York, N.Y.). 266: 1380-3. PMID 7973728 DOI: 10.1126/Science.7973728  0.616
1994 Guttman DS, Dykhuizen DE. Detecting selective sweeps in naturally occurring Escherichia coli. Genetics. 138: 993-1003. PMID 7896119  0.582
Low-probability matches (unlikely to be authored by this person)
2012 Azad MB, Konya T, Koster B, Maughan H, Guttman DS, Field CJ, Chari RS, Sears MR, Becker AB, Scott JA, Kozyrskyj AL. Infant gut microbiota and the hygiene hypothesis of allergic disease Allergy, Asthma & Clinical Immunology. 8: 1-1. DOI: 10.1186/1710-1492-8-S1-A12  0.3
2009 Pitout JD, Campbell L, Church DL, Wang PW, Guttman DS, Gregson DB. Using a commercial DiversiLab semiautomated repetitive sequence-based PCR typing technique for identification of Escherichia coli clone ST131 producing CTX-M-15. Journal of Clinical Microbiology. 47: 1212-5. PMID 19204095 DOI: 10.1128/Jcm.02265-08  0.294
2011 Nasmith CG, Walkowiak S, Wang L, Leung WW, Gong Y, Johnston A, Harris LJ, Guttman DS, Subramaniam R. Tri6 is a global transcription regulator in the phytopathogen Fusarium graminearum. Plos Pathogens. 7: e1002266. PMID 21980289 DOI: 10.1371/Journal.Ppat.1002266  0.294
2019 McTaggart LR, Copeland JK, Surendra A, Wang PW, Husain S, Coburn B, Guttman DS, Kus JV. Mycobiome Sequencing and Analysis Applied to Fungal Community Profiling of the Lower Respiratory Tract During Fungal Pathogenesis. Frontiers in Microbiology. 10: 512. PMID 30930884 DOI: 10.3389/Fmicb.2019.00512  0.293
2019 Robertson SJ, Lemire P, Maughan H, Goethel A, Turpin W, Bedrani L, Guttman DS, Croitoru K, Girardin SE, Philpott DJ. Comparison of Co-housing and Littermate Methods for Microbiota Standardization in Mouse Models. Cell Reports. 27: 1910-1919.e2. PMID 31067473 DOI: 10.1016/J.Celrep.2019.04.023  0.293
2015 Luck H, Tsai S, Chung J, Clemente-Casares X, Ghazarian M, Revelo XS, Lei H, Luk CT, Shi SY, Surendra A, Copeland JK, Ahn J, Prescott D, Rasmussen BA, Chng MH, ... ... Guttman DS, et al. Regulation of obesity-related insulin resistance with gut anti-inflammatory agents. Cell Metabolism. 21: 527-42. PMID 25863246 DOI: 10.1016/J.Cmet.2015.03.001  0.292
2016 Selvanantham T, Lin Q, Guo CX, Surendra A, Fieve S, Escalante NK, Guttman DS, Streutker CJ, Robertson SJ, Philpott DJ, Mallevaey T. NKT Cell-Deficient Mice Harbor an Altered Microbiota that Fuels Intestinal Inflammation during Chemically Induced Colitis. Journal of Immunology (Baltimore, Md. : 1950). PMID 27799307 DOI: 10.4049/Jimmunol.1601410  0.292
2022 Almeida RND, Greenberg M, Bundalovic-Torma C, Martel A, Wang PW, Middleton MA, Chatterton S, Desveaux D, Guttman DS. Predictive modeling of Pseudomonas syringae virulence on bean using gradient boosted decision trees. Plos Pathogens. 18: e1010716. PMID 35877772 DOI: 10.1371/journal.ppat.1010716  0.286
2014 Salas SM, Azad MB, Konya T, Guttman DS, Becker AB, Sears MR, Scott JA, Kozyrskyj AL. Infant gut microbiota and the development of wheeze in early childhood Allergy, Asthma & Clinical Immunology. 10: 1-2. DOI: 10.1186/1710-1492-10-S1-A35  0.285
2012 Lee SJ, Lee J, Li KK, Holland D, Maughan H, Guttman DS, Yusta B, Drucker DJ. Disruption of the murine Glp2r impairs Paneth cell function and increases susceptibility to small bowel enteritis. Endocrinology. 153: 1141-51. PMID 22253424 DOI: 10.1210/En.2011-1954  0.283
2015 Vidya P, Smith L, Beaudoin T, Yau YC, Clark S, Coburn B, Guttman DS, Hwang DM, Waters V. Chronic infection phenotypes of Pseudomonas aeruginosa are associated with failure of eradication in children with cystic fibrosis. European Journal of Clinical Microbiology & Infectious Diseases : Official Publication of the European Society of Clinical Microbiology. PMID 26492874 DOI: 10.1007/S10096-015-2509-4  0.283
2019 Luck H, Khan S, Kim JH, Copeland JK, Revelo XS, Tsai S, Chakraborty M, Cheng K, Tao Chan Y, Nøhr MK, Clemente-Casares X, Perry MC, Ghazarian M, Lei H, Lin YH, ... ... Guttman DS, et al. Gut-associated IgA immune cells regulate obesity-related insulin resistance. Nature Communications. 10: 3650. PMID 31409776 DOI: 10.1038/S41467-019-11370-Y  0.282
2020 Szamosi JC, Forbes JD, Copeland JK, Knox NC, Shekarriz S, Rossi L, Graham M, Bonner C, Guttman DS, Van Domselaar G, Surette MG, Bernstein CN. Assessment of Inter-Laboratory Variation in the Characterization and Analysis of the Mucosal Microbiota in Crohn's Disease and Ulcerative Colitis. Frontiers in Microbiology. 11: 2028. PMID 32973734 DOI: 10.3389/Fmicb.2020.02028  0.279
2012 Maughan H, Cunningham KS, Wang PW, Zhang Y, Cypel M, Chaparro C, Tullis DE, Waddell TK, Keshavjee S, Liu M, Guttman DS, Hwang DM. Pulmonary bacterial communities in surgically resected noncystic fibrosis bronchiectasis lungs are similar to those in cystic fibrosis. Pulmonary Medicine. 2012: 746358. PMID 22448327 DOI: 10.1155/2012/746358  0.278
2019 Clark ST, Sinha U, Zhang Y, Wang PW, Donaldson SL, Coburn B, Waters VJ, Yau YCW, Tullis DE, Guttman DS, Hwang DM. Penicillin binding protein 3 is a common adaptive target among Pseudomonas aeruginosa isolates from adult cystic fibrosis patients treated with β-lactams. International Journal of Antimicrobial Agents. PMID 30664925 DOI: 10.1016/J.Ijantimicag.2019.01.009  0.278
2020 McKnight MM, Qu Z, Copeland JK, Guttman DS, Walker VK. A practical assessment of nano-phosphate on soybean (Glycine max) growth and microbiome establishment. Scientific Reports. 10: 9151. PMID 32499485 DOI: 10.1038/S41598-020-66005-W  0.278
2014 Belcheva A, Irrazabal T, Robertson SJ, Streutker C, Maughan H, Rubino S, Moriyama EH, Copeland JK, Kumar S, Green B, Geddes K, Pezo RC, Navarre WW, Milosevic M, Wilson BC, ... ... Guttman DS, et al. Gut microbial metabolism drives transformation of MSH2-deficient colon epithelial cells. Cell. 158: 288-99. PMID 25036629 DOI: 10.1016/J.Cell.2014.04.051  0.277
2017 Bhat M, Pasini E, Copeland J, Angeli M, Husain S, Kumar D, Renner E, Teterina A, Allard J, Guttman DS, Humar A. Impact of Immunosuppression on the Metagenomic Composition of the Intestinal Microbiome: a Systems Biology Approach to Post-Transplant Diabetes. Scientific Reports. 7: 10277. PMID 28860611 DOI: 10.1038/S41598-017-10471-2  0.276
2019 Oliva Bernal M, Schneeberger PH, Taylor R, Rey V, Hansen AR, Taylor K, Bayley A, Hope A, Hosni A, Bratman SV, Ringash J, Gilbert RW, Weinreb I, Perez-Ordonez B, Waldron J, ... ... Guttman D, et al. Role of the oral and gut microbiota as a biomarker in locoregionally advanced oropharyngeal squamous cell carcinoma (ROMA LA-OPSCC). Journal of Clinical Oncology. 37: 6045-6045. DOI: 10.1200/Jco.2019.37.15_Suppl.6045  0.275
2015 Turpin W, Espin-Garcia O, Shestopaloff K, xu L, Silverberg MS, Smith M, Xu W, Guttman DS, Moreno-Hagelsieb G, Paterson AD, Croitoru K. 744 Genome-Wide Association of Composition and Diversity of the Intestinal Bacterial Phyla in Healthy First Degree Relatives (FDR) of Crohn's Disease (CD) Subjects Gastroenterology. 148: S-140. DOI: 10.1016/S0016-5085(15)30479-0  0.275
2020 Stapleton PJ, Izydorcyzk C, Clark S, Blanchard A, Wang PW, Yau Y, Waters V, Guttman DS. Pseudomonas aeruginosa strain sharing in early infection among children with cystic fibrosis. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 32544950 DOI: 10.1093/Cid/Ciaa788  0.274
2016 Layeghifard M, Hwang DM, Guttman DS. Disentangling Interactions in the Microbiome: A Network Perspective. Trends in Microbiology. PMID 27916383 DOI: 10.1016/J.Tim.2016.11.008  0.271
2013 Tyler AD, Knox N, Kabakchiev B, Milgrom R, Kirsch R, Cohen Z, McLeod RS, Guttman DS, Krause DO, Silverberg MS. Characterization of the gut-associated microbiome in inflammatory pouch complications following ileal pouch-anal anastomosis. Plos One. 8: e66934. PMID 24086242 DOI: 10.1371/Journal.Pone.0066934  0.27
2017 Yasmin F, Tun HM, Konya TB, Guttman DS, Chari RS, Field CJ, Becker AB, Mandhane PJ, Turvey SE, Subbarao P, Sears MR, Scott JA, Dinu I, Kozyrskyj AL. Cesarean Section, Formula Feeding, and Infant Antibiotic Exposure: Separate and Combined Impacts on Gut Microbial Changes in Later Infancy. Frontiers in Pediatrics. 5: 200. PMID 29018787 DOI: 10.3389/Fped.2017.00200  0.268
2014 O'Doherty KC, Neufeld JD, Brinkman FS, Gardner H, Guttman DS, Beiko RG. Opinion: Conservation and stewardship of the human microbiome. Proceedings of the National Academy of Sciences of the United States of America. 111: 14312-3. PMID 25294925 DOI: 10.1073/Pnas.1413200111  0.268
2015 Coburn B, Wang PW, Diaz Caballero J, Clark ST, Brahma V, Donaldson S, Zhang Y, Surendra A, Gong Y, Elizabeth Tullis D, Yau YC, Waters VJ, Hwang DM, Guttman DS. Lung microbiota across age and disease stage in cystic fibrosis. Scientific Reports. 5: 10241. PMID 25974282 DOI: 10.1038/Srep10241  0.267
2018 Middleton MA, Layeghifard M, Klingel M, Stanojevic S, Yau YCW, Zlosnik JEA, Coriati A, Ratjen FA, Tullis ED, Stephenson A, Wilcox P, Freitag A, Chilvers M, McKinney M, Lavoie A, ... ... Guttman DS, et al. Epidemiology of Clonal Pseudomonas aeruginosa Infection in a Canadian Cystic Fibrosis Population. Annals of the American Thoracic Society. PMID 29911888 DOI: 10.1513/Annalsats.201801-007Oc  0.265
2013 Azad MB, Konya T, Maughan H, Guttman DS, Field CJ, Sears MR, Becker AB, Scott JA, Kozyrskyj AL. Infant gut microbiota and the hygiene hypothesis of allergic disease: impact of household pets and siblings on microbiota composition and diversity. Allergy, Asthma, and Clinical Immunology : Official Journal of the Canadian Society of Allergy and Clinical Immunology. 9: 15. PMID 23607879 DOI: 10.1186/1710-1492-9-15  0.263
2015 Coburn B, Guttman DS. The human microbiome. Cmaj : Canadian Medical Association Journal = Journal De L'Association Medicale Canadienne. PMID 25991836 DOI: 10.1503/Cmaj.141072  0.262
2019 Drall KM, Tun HM, Morales-Lizcano NP, Konya TB, Guttman DS, Field CJ, Mandal R, Wishart DS, Becker AB, Azad MB, Lefebvre DL, Mandhane PJ, Moraes TJ, Sears MR, Turvey SE, et al. Colonization Is Differentially Associated With Gut Microbiome Profiles by Infant Feeding Modality at 3-4 Months of Age. Frontiers in Immunology. 10: 2866. PMID 31921134 DOI: 10.3389/Fimmu.2019.02866  0.259
2012 Tyler AD, Berard N, Guttman DS, Krause DO, Silverberg MS. Tu1905 Interaction of IBD-Associated Genetic Polymorphisms and the Microbiome of the Pelvic Pouch Gastroenterology. 142: S-874-S-875. DOI: 10.1016/S0016-5085(12)63392-7  0.258
2020 Nielsen CC, Gascon M, Osornio-Vargas AR, Shier C, Guttman DS, Becker AB, Azad MB, Sears MR, Lefebvre DL, Moraes TJ, Turvey SE, Subbarao P, Takaro TK, Brook JR, Scott JA, et al. Natural environments in the urban context and gut microbiota in infants. Environment International. 142: 105881. PMID 32610248 DOI: 10.1016/J.Envint.2020.105881  0.256
2020 Vu K, Lou W, Tun HM, Konya TB, Morales-Lizcano N, Chari RS, Field CJ, Guttman DS, Mandal R, Wishart DS, Azad MB, Becker AB, Mandhane PJ, Moraes TJ, Lefebvre DL, et al. From birth to overweight and atopic disease: multiple and common pathways of the infant gut microbiome. Gastroenterology. PMID 32946900 DOI: 10.1053/J.Gastro.2020.08.053  0.254
2014 Azad MB, Konya T, Maughan H, Guttman DS, Sears MR, Becker AB, Scott JA, Kozyrskyj AL. The Gut Microbiome and the Hygiene Hypothesis of Allergic Disease. Impact of Pets and Siblings on Infant Gut Microbiota Annals of the American Thoracic Society. 11. DOI: 10.1513/Annalsats.201307-218Mg  0.253
2013 Azad MB, Becker AB, Guttman DS, Sears MR, Scott JA, Kozyrskyj AL. Gut microbiota diversity and atopic disease: does breast-feeding play a role? The Journal of Allergy and Clinical Immunology. 131: 247-8. PMID 23199602 DOI: 10.1016/J.Jaci.2012.10.044  0.252
2017 Waese J, Provart NJ, Guttman DS. Topo-phylogeny: Visualizing evolutionary relationships on a topographic landscape. Plos One. 12: e0175895. PMID 28459802 DOI: 10.1371/Journal.Pone.0175895  0.251
2016 Turpin W, Kevans D, Shestopaloff K, Smith MI, Guttman DS, Silverberg MS, Xu W, Paterson A, Croitoru K. Su1900 Association of Functional Capacity of Fecal Microbiota With Intestinal Permeability in Healthy First Degree Relatives of Crohn's Disease Patients Gastroenterology. 150: S583. DOI: 10.1016/S0016-5085(16)31999-0  0.25
2014 Belcheva A, Irrazabal T, Robertson SJ, Streutker C, Maughan H, Rubino S, Moriyama EH, Copeland JK, Surendra A, Kumar S, Green B, Geddes K, Pezo RC, Navarre WW, Milosevic M, ... ... Guttman DS, et al. Erratum: Gut microbial metabolism drives transformation of msh2-deficient colon epithelial cells (Cell (2014) 158 (288-299) ) Cell. 159. DOI: 10.1016/J.Cell.2014.09.041  0.249
2015 Azad MB, Konya T, Persaud RR, Guttman DS, Chari RS, Field CJ, Sears MR, Mandhane PJ, Turvey SE, Subbarao P, Becker AB, Scott JA, Kozyrskyj AL. Impact of maternal intrapartum antibiotics, method of birth and breastfeeding on gut microbiota during the first year of life: a prospective cohort study. Bjog : An International Journal of Obstetrics and Gynaecology. PMID 26412384 DOI: 10.1111/1471-0528.13601  0.249
2018 Tun MH, Tun HM, Mahoney JJ, Konya TB, Guttman DS, Becker AB, Mandhane PJ, Turvey SE, Subbarao P, Sears MR, Brook JR, Lou W, Takarao TK, Scott JA, Kozyrskyj AL, et al. Postnatal exposure to household disinfectants, infant gut microbiota and subsequent risk of overweight in children. Cmaj : Canadian Medical Association Journal = Journal De L'Association Medicale Canadienne. 190: E1097-E1107. PMID 30224442 DOI: 10.1503/Cmaj.170809  0.247
2016 Turpin W, Kelly O, Shestopaloff K, Espin-Garcia O, Silverberg MS, Smith MI, Xu W, Guttman DS, Paterson A, Croitoru K. 86 Association of Environmental Exposures With the Composition and Diversity of the Human Gut Microbiome in Healthy First Degree Relatives (FDR) of Crohn's Patients Gastroenterology. 150: S21-S22. DOI: 10.1016/S0016-5085(16)30197-4  0.245
2015 Turpin W, Shestopaloff K, Silverberg MS, Smith M, Xu W, Guttman DS, Moreno-Hagelsieb G, Paterson AD, Croitoru K. Mo1795 Environmental and Demographic Factors Are Associated With the Composition of Human Gut Microbiome in Healthy FDR of Crohn's Patients Gastroenterology. 148: S-713. DOI: 10.1016/S0016-5085(15)32425-2  0.242
2022 Breit-McNally C, Laflamme B, Singh RA, Desveaux D, Guttman DS. ZAR1: Guardian of plant kinases. Frontiers in Plant Science. 13: 981684. PMID 36212348 DOI: 10.3389/fpls.2022.981684  0.242
2022 Bundalovic-Torma C, Desveaux D, Guttman DS. RecPD: A Recombination-aware measure of phylogenetic diversity. Plos Computational Biology. 18: e1009899. PMID 35192600 DOI: 10.1371/journal.pcbi.1009899  0.239
2014 Persaud R, Azad MB, Konya T, Guttman DS, Chari RS, Sears MR, Becker AB, Scott JA, Kozyrskyj AL. Impact of perinatal antibiotic exposure on the infant gut microbiota at one year of age Allergy, Asthma & Clinical Immunology. 10: 1-2. DOI: 10.1186/1710-1492-10-S1-A31  0.238
2021 Seto D, Khan M, Bastedo DP, Martel A, Vo T, Guttman D, Subramaniam R, Desveaux D. The small molecule Zaractin activates ZAR1-mediated immunity in . Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34799454 DOI: 10.1073/pnas.2116570118  0.238
2017 Chuong KH, Hwang DM, Tullis DE, Waters VJ, Yau YC, Guttman DS, O'Doherty KC. Navigating social and ethical challenges of biobanking for human microbiome research. Bmc Medical Ethics. 18: 1. PMID 28077127 DOI: 10.1186/S12910-016-0160-Y  0.237
2013 Azad MB, Konya T, Maughan H, Guttman DS, Field CJ, Chari RS, Sears MR, Becker AB, Scott JA, Kozyrskyj AL. Gut microbiota of healthy Canadian infants: profiles by mode of delivery and infant diet at 4 months. Cmaj : Canadian Medical Association Journal = Journal De L'Association Medicale Canadienne. 185: 385-94. PMID 23401405 DOI: 10.1503/Cmaj.121189  0.236
2016 Bridgman SL, Konya T, Azad MB, Guttman DS, Sears MR, Becker AB, Turvey SE, Mandhane PJ, Subbarao P, Investigators CS, Scott JA, Field CJ, Kozyrskyj AL. High fecal IgA is associated with reduced C. difficile colonization in infants. Microbes and Infection / Institut Pasteur. PMID 27235197 DOI: 10.1016/J.Micinf.2016.05.001  0.23
2023 Ruiz-Bedoya T, Wang PW, Desveaux D, Guttman DS. Cooperative virulence via the collective action of secreted pathogen effectors. Nature Microbiology. PMID 36782026 DOI: 10.1038/s41564-023-01328-8  0.23
2014 Azad MB, Konya T, Guttman DS, Field CJ, Chari RS, Sears MR, Becker AB, Scott JA, Kozyrskyj AL. Impact of cesarean section delivery and breastfeeding on infant gut microbiota at one year of age Allergy, Asthma & Clinical Immunology. 10: 1-2. DOI: 10.1186/1710-1492-10-S1-A24  0.228
2008 Tan J, Pitout JD, Guttman DS. New and sensitive assay for determining Pseudomonas aeruginosa metallo-beta-lactamase resistance to imipenem. Journal of Clinical Microbiology. 46: 1870-2. PMID 18337388 DOI: 10.1128/Jcm.02175-07  0.226
2008 Peek J, Singh S, Stavrindes J, Guttman D, Christendat D. Using natural variations among shikimate dehydrogenases to study modes of substrate selectivity Acta Crystallographica Section a Foundations of Crystallography. 64: C252-C253. DOI: 10.1107/S0108767308091897  0.226
2017 Tun HM, Konya T, Takaro TK, Brook JR, Chari R, Field CJ, Guttman DS, Becker AB, Mandhane PJ, Turvey SE, Subbarao P, Sears MR, Scott JA, Kozyrskyj AL. Exposure to household furry pets influences the gut microbiota of infant at 3-4 months following various birth scenarios. Microbiome. 5: 40. PMID 28381231 DOI: 10.1186/S40168-017-0254-X  0.224
2020 Sasson G, Turpin W, Garay JAR, Power N, Smith MI, Guttman DS, Lee S, Griffiths AM, Huynh HQ, Dieleman LA, Panaccione R, Steinhart AH, Silverberg MS, Aumais GL, Seidman EG, et al. 135 The Gem Project: Dietary Patterns Are Associated With Microbiome Composition And Intestinal Inflammation In Healhy First-Degree Relatives Of Crohn'S Disease Patients Gastroenterology. 158. DOI: 10.1016/S0016-5085(20)30749-6  0.224
2017 Koleva PT, Tun HM, Konya T, Guttman DS, Becker AB, Mandhane PJ, Turvey SE, Subbarao P, Sears MR, Scott JA, Kozyrskyj AL. Sex-specific impact of asthma during pregnancy on infant gut microbiota. The European Respiratory Journal. 50. PMID 29167295 DOI: 10.1183/13993003.00280-2017  0.222
2016 Ryczko MC, Pawling J, Chen R, Abdel Rahman AM, Yau K, Copeland JK, Zhang C, Surendra A, Guttman DS, Figeys D, Dennis JW. Metabolic Reprogramming by Hexosamine Biosynthetic and Golgi N-Glycan Branching Pathways. Scientific Reports. 6: 23043. PMID 26972830 DOI: 10.1038/Srep23043  0.221
2013 Kevans D, Madsen K, Silverberg MS, Xu W, Shestopaloff K, Onay UV, Paterson AD, Griffiths AM, Moayyedi P, Ropeleski MJ, Beck PL, Bernstein CN, Bitton A, Dieleman LA, Guttman DS, et al. Tu1744 The Relationship Between Common IBD-Associated Risk Alleles and Intestinal Permeability in a Cohort of Healthy First Degree Relatives of Individuals With Crohn's Disease Gastroenterology. 144: S-835. DOI: 10.1016/S0016-5085(13)63107-8  0.221
2018 Tun HM, Bridgman SL, Chari R, Field CJ, Guttman DS, Becker AB, Mandhane PJ, Turvey SE, Subbarao P, Sears MR, Scott JA, Kozyrskyj AL. Roles of Birth Mode and Infant Gut Microbiota in Intergenerational Transmission of Overweight and Obesity From Mother to Offspring. Jama Pediatrics. PMID 29459942 DOI: 10.1001/Jamapediatrics.2017.5535  0.219
2016 Hota SS, Sales V, Tomlinson G, Salpeter MJ, McGeer A, Coburn B, Guttman DS, Low DE, Poutanen SM. Oral Vancomycin Followed by Fecal Transplantation Versus Tapering Oral Vancomycin Treatment for Recurrent Clostridium difficile Infection: An Open-Label, Randomized Controlled Trial. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 28011612 DOI: 10.1093/Cid/Ciw731  0.218
2013 Turpin W, Moreno-Hagelsieb G, Silverberg MS, Xu W, Paterson AD, Griffiths AM, Moayyedi P, Ropeleski MJ, Onay UV, Alcaraz LD, Beck PL, Bernstein CN, Bitton A, Dieleman LA, Feagan BG, ... Guttman DS, et al. 259 Specific Crohn's Disease (CD) Associated Risk Alleles Are Associated With the Composition of the Intestinal Microbiota in Healthy First Degree Relatives (FDR) of CD Subjects Gastroenterology. 144: S-57. DOI: 10.1016/S0016-5085(13)60205-X  0.217
2020 Drall KM, Field CJ, Haqq AM, de Souza RJ, Tun HM, Morales-Lizcano NP, Konya TB, Guttman DS, Azad MB, Becker AB, Lefebvre DL, Mandhane PJ, Moraes TJ, Sears MR, Turvey SE, et al. Vitamin D supplementation in pregnancy and early infancy in relation to gut microbiota composition and colonization: implications for viral respiratory infections. Gut Microbes. 12: 1799734. PMID 32779963 DOI: 10.1080/19490976.2020.1799734  0.216
2020 Irrazabal T, Thakur BK, Kang M, Malaise Y, Streutker C, Wong EOY, Copeland J, Gryfe R, Guttman DS, Navarre WW, Martin A. Limiting oxidative DNA damage reduces microbe-induced colitis-associated colorectal cancer. Nature Communications. 11: 1802. PMID 32286276 DOI: 10.1038/S41467-020-15549-6  0.215
2018 Forbes JD, Azad MB, Vehling L, Tun HM, Konya TB, Guttman DS, Field CJ, Lefebvre D, Sears MR, Becker AB, Mandhane PJ, Turvey SE, Moraes TJ, Subbarao P, Scott JA, et al. Association of Exposure to Formula in the Hospital and Subsequent Infant Feeding Practices With Gut Microbiota and Risk of Overweight in the First Year of Life. Jama Pediatrics. e181161. PMID 29868719 DOI: 10.1001/Jamapediatrics.2018.1161  0.21
2022 Fitzpatrick C, Copeland JK, Wang PW, Guttman DS, Kotanen P, Johnson M. Habitats within the plant root differ in bacterial network topology and taxonomic assortativity. Molecular Plant-Microbe Interactions : Mpmi. PMID 36463399 DOI: 10.1094/MPMI-09-22-0188-R  0.209
2018 Smakowska-Luzan E, Mott GA, Parys K, Stegmann M, Howton TC, Layeghifard M, Neuhold J, Lehner A, Kong J, Grünwald K, Weinberger N, Satbhai SB, Mayer D, Busch W, Madalinski M, ... ... Guttman DS, et al. Publisher Correction: An extracellular network of Arabidopsis leucine-rich repeat receptor kinases. Nature. PMID 29973716 DOI: 10.1038/S41586-018-0268-Y  0.207
2020 Seto D, Laflamme B, Guttman D, Desveaux D. The Arabidopsis ZED1-Related Kinase Genomic Cluster is Specifically Required for Effector-Triggered Immunity. Plant Physiology. PMID 33037126 DOI: 10.1104/pp.20.00447  0.207
2021 Copeland JK, Chao G, Vanderhout S, Acton E, Wang PW, Benchimol EI, El Sohami A, Croitoru K, Gommerman JL, Guttman DS. The Impact of Migration on the Gut Metagenome of South Asian Canadians. Gut Microbes. 13: 1-29. PMID 33794735 DOI: 10.1080/19490976.2021.1902705  0.205
2020 Raygoza Garay J, Turpin W, Smith M, Goethel A, Guttman DS, Croitoru K. A17 ASSOCIATION BETWEEN HOST INFLAMMATION-RELATED PROTEOMICS AND GUT MICROBIOME IN HEALTHY FIRST-DEGREE RELATIVES OF CROHN’S DISEASE PATIENTS Journal of the Canadian Association of Gastroenterology. 3: 20-21. DOI: 10.1093/jcag/gwz047.016  0.191
2017 Beaudoin T, Yau YCW, Stapleton PJ, Gong Y, Wang PW, Guttman DS, Waters V. Staphylococcus aureus interaction with Pseudomonas aeruginosa biofilm enhances tobramycin resistance. Npj Biofilms and Microbiomes. 3: 25. PMID 29062489 DOI: 10.1038/s41522-017-0035-0  0.189
1988 Guttman D. The Emperor Is Indeed Stark Raving Naked Jama Pediatrics. 142: 413-413. PMID 3348179 DOI: 10.1001/Archpedi.1988.02150040063005  0.188
2016 Arrieta M, Arevalos A, Stiemsma L, Chico ME, Sandoval C, Jin M, Walter J, Cooper P, Finlay B, Bernatchez E, Gold MJ, Langlois A, Blais-Lecours P, Duchaine C, Marsolais D, ... ... Guttman D, et al. AllerGen’s 8th research conference Allergy, Asthma & Clinical Immunology. 12: 63. DOI: 10.1186/S13223-016-0164-7  0.183
2020 Turpin W, Bedrani L, Espin-Garcia O, Xu W, Silverberg MS, Smith MI, Garay JAR, Lee SH, Guttman DS, Griffiths A, Moayyedi P, Panaccione R, Huynh H, Steinhart HA, Aumais G, et al. Associations of NOD2 polymorphisms with Erysipelotrichaceae in stool of in healthy first degree relatives of Crohn's disease subjects. Bmc Medical Genetics. 21: 204. PMID 33059653 DOI: 10.1186/s12881-020-01115-w  0.182
2022 Zou A, Nadeau K, Xiong X, Wang PW, Copeland JK, Lee JY, Pierre JS, Ty M, Taj B, Brumell JH, Guttman DS, Sharif S, Korver D, Parkinson J. Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure. Microbiome. 10: 127. PMID 35965349 DOI: 10.1186/s40168-022-01319-7  0.177
2022 Currie EG, Coburn B, Porfilio EA, Lam P, Rojas OL, Novak J, Yang S, Chowdhury RB, Ward LA, Wang PW, Khaleghi K, An J, Crome SQ, Hladunewich MA, Barbour SJ, ... ... Guttman DS, et al. Immunoglobulin A nephropathy is characterized by anti-commensal humoral immune responses. Jci Insight. PMID 35133979 DOI: 10.1172/jci.insight.141289  0.175
2022 Lin Q, Kuypers M, Liu Z, Copeland JK, Chan D, Robertson SJ, Kontogiannis J, Guttman DS, Banks EK, Philpott DJ, Mallevaey T. Invariant natural killer T cells minimally influence gut microbiota composition in mice. Gut Microbes. 14: 2104087. PMID 35912530 DOI: 10.1080/19490976.2022.2104087  0.165
2021 Sivaraj S, Copeland JK, Malik A, Pasini E, Angeli M, Azhie A, Husain S, Kumar D, Allard J, Guttman DS, Humar A, Bhat M. Characterization and predictive functional profiles on metagenomic 16S rRNA data of liver transplant recipients: A longitudinal study. Clinical Transplantation. e14534. PMID 34781411 DOI: 10.1111/ctr.14534  0.164
2022 Leibovitzh H, Lee SH, Xue M, Raygoza Garay JA, Hernandez-Rocha C, Madsen KL, Meddings JB, Guttman DS, Espin-Garcia O, Smith MI, Goethel A, Griffiths AM, Moayyedi P, Steinhart AH, Panancionne R, et al. Altered gut microbiome composition and function are associated with gut barrier dysfunction in healthy relatives of patients with Crohn's disease. Gastroenterology. PMID 35850197 DOI: 10.1053/j.gastro.2022.07.004  0.15
2018 Turpin W, Bedrani L, Espin-Garcia O, Smith M, Guttman D, Madsen K, Griffiths A, Moayyedi P, Panaccione R, Huynh HQ, Dieleman LA, Steinhart A, Aumais G, Silverberg MS, Wei X, et al. A35 GENOME WIDE ASSOCIATION STUDY OF ABNORMAL INTESTINAL PERMEABILITY IN HEALTHY FIRST DEGREE RELATIVES OF CROHN’S PATIENTS Journal of the Canadian Association of Gastroenterology. 1: 59-60. DOI: 10.1093/jcag/gwy009.035  0.147
2020 Khanolkar RA, Clark ST, Wang PW, Hwang DM, Yau YCW, Waters VJ, Guttman DS. Ecological Succession of Polymicrobial Communities in the Cystic Fibrosis Airways. Msystems. 5. PMID 33262240 DOI: 10.1128/mSystems.00809-20  0.142
2023 Graña-Miraglia L, Morales-Lizcano N, Wang PW, Hwang DM, Yau YCW, Waters VJ, Guttman DS. Predictive modeling of antibiotic eradication therapy success for new-onset Pseudomonas aeruginosa pulmonary infections in children with cystic fibrosis. Plos Computational Biology. 19: e1011424. PMID 37672526 DOI: 10.1371/journal.pcbi.1011424  0.141
2021 Morris AJ, Jackson L, Cw Yau Y, Reichhardt C, Beaudoin T, Uwumarenogie S, Guttman KM, Lynne Howell P, Parsek MR, Hoffman LR, Nguyen D, DiGiandomenico A, Guttman DS, Wozniak DJ, Waters VJ. The role of Psl in the failure to eradicate Pseudomonas aeruginosa biofilms in children with cystic fibrosis. Npj Biofilms and Microbiomes. 7: 63. PMID 34349133 DOI: 10.1038/s41522-021-00234-3  0.136
1998 Guttman DS. Aerial Plant Surface Microbiology.Cindy E. Morris , Philippe C. Nicot , Christophe Nguyen-The The Quarterly Review of Biology. 73: 513-513. DOI: 10.1086/420468  0.132
2020 Sasson G, Raygoza Garay J, Turpin W, Power N, Smith M, Guttman DS, Research Consortium T, Croitoru K. A223 THE GEM PROJECT: ASSOCIATIONS OF DIETARY PATTERNS WITH MICROBIOME AND FECAL CALPROTECTIN IN HEALTHY FIRST-DEGREE RELATIVES OF CROHN’S DISEASE PATIENTS Journal of the Canadian Association of Gastroenterology. 3: 98-99. DOI: 10.1093/jcag/gwz047.222  0.132
2019 Layeghifard M, Li H, Wang PW, Donaldson SL, Coburn B, Clark ST, Caballero JD, Zhang Y, Tullis DE, Yau YCW, Waters V, Hwang DM, Guttman DS. Microbiome networks and change-point analysis reveal key community changes associated with cystic fibrosis pulmonary exacerbations. Npj Biofilms and Microbiomes. 5: 4. PMID 30675371 DOI: 10.1038/s41522-018-0077-y  0.131
2021 Clark ST, Stapleton PJ, Wang PW, Yau YCW, Waters VJ, Hwang DM, Guttman DS. Evaluation of digital dispense-assisted broth microdilution antimicrobial susceptibility testing for Pseudomonas aeruginosa isolates. Scientific Reports. 11: 9157. PMID 33911107 DOI: 10.1038/s41598-021-88423-0  0.128
2022 Morris AJ, Yau YCW, Park S, Eisha S, McDonald N, Parsek MR, Howell PL, Hoffman LR, Nguyen D, DiGiandomenico A, Rooney AM, Coburn B, Grana-Miraglia L, Wang P, Guttman DS, et al. Pseudomonas aeruginosa aggregation and Psl expression in sputum is associated with antibiotic eradication failure in children with cystic fibrosis. Scientific Reports. 12: 21444. PMID 36509824 DOI: 10.1038/s41598-022-25889-6  0.116
2023 Raygoza Garay JA, Turpin W, Lee SH, Smith MI, Goethel A, Griffiths AM, Moayyedi P, Espin-Garcia O, Abreu M, Aumais GL, Bernstein CN, Biron IA, Cino M, Deslandres C, Dotan I, ... ... Guttman DS, et al. Gut Microbiome Composition is associated with future onset of Crohn's Disease in Healthy First-Degree Relatives. Gastroenterology. PMID 37263307 DOI: 10.1053/j.gastro.2023.05.032  0.111
2021 Tamana SK, Tun HM, Konya T, Chari RS, Field CJ, Guttman DS, Becker AB, Moraes TJ, Turvey SE, Subbarao P, Sears MR, Pei J, Scott JA, Mandhane PJ, Kozyrskyj AL. Bacteroides-dominant gut microbiome of late infancy is associated with enhanced neurodevelopment. Gut Microbes. 13: 1-17. PMID 34132157 DOI: 10.1080/19490976.2021.1930875  0.111
2021 Popovic A, Bourdon C, Wang PW, Guttman DS, Soofi S, Bhutta ZA, Bandsma RHJ, Parkinson J, Pell LG. Micronutrient supplements can promote disruptive protozoan and fungal communities in the developing infant gut. Nature Communications. 12: 6729. PMID 34795270 DOI: 10.1038/s41467-021-27010-3  0.111
2019 Drall K, Tun H, Azad MB, Guttman D, Sears M, Mandhane P, Subbarao P, Turvey S, Becker A, Lefebvre D, Morales-Lizcano N, Konya T, Scott J, Kozyrskyj A. Clostridioides Difficile Colonization Is Differentially Associated with Gut Microbiota Composition in Breastfed versus Formula Fed Infants (OR01-02-19). Current Developments in Nutrition. 3. PMID 31223816 DOI: 10.1093/cdn/nzz040.OR01-02-19  0.108
2022 Turpin W, Dong M, Sasson G, Raygoza Garay JA, Espin-Garcia O, Lee SH, Neustaeter A, Smith MI, Leibovitzh H, Guttman DS, Goethel A, Griffiths AM, Huynh HQ, Dieleman LA, Panaccione R, et al. Mediterranean-like dietary pattern associations with gut microbiome composition and sub-clinical gastrointestinal inflammation. Gastroenterology. PMID 35643175 DOI: 10.1053/j.gastro.2022.05.037  0.103
2021 Tun HM, Peng Y, Chen B, Konya TB, Morales-Lizcano NP, Chari R, Field CJ, Guttman DS, Becker AB, Mandhane PJ, Moraes TJ, Sears MR, Turvey SE, Subbarao P, Simons E, et al. Ethnicity associations with food sensitization are mediated by gut microbiota development in the first year of life. Gastroenterology. PMID 33741316 DOI: 10.1053/j.gastro.2021.03.016  0.097
2017 Beaudoin T, Yau Y, Stapleton P, Gong Y, Pauline W, Guttman D, Waters V. 105 Staphylococcus aureus interaction with Pseudomonas aeruginosa biofilm associated with tobramycin resistance and failure of eradication therapy in children with cystic fibrosis Journal of Cystic Fibrosis. 16: S92. DOI: 10.1016/S1569-1993(17)30469-1  0.093
2023 Fralick M, Burella M, Hinz A, Mejbel HS, Guttman DS, Xing L, Moggridge J, Lapp J, Wong A, Nott C, Harris-Linton N, Kassen R, MacFadden DR. The spatial and temporal distribution of SARS-CoV-2 from the built environment of COVID-19 patient rooms: A multicentre prospective study. Plos One. 18: e0282489. PMID 36913370 DOI: 10.1371/journal.pone.0282489  0.093
1997 Guttman DS. Recombination and clonality in natural populations of Escherichia coil Trends in Ecology and Evolution. 12: 16-21. DOI: 10.1016/S0169-5347(96)10057-4  0.092
2022 Pickel L, Lee JH, Maughan H, Shi IQ, Verma N, Yeung C, Guttman D, Sung HK. Circadian rhythms in metabolic organs and the microbiota during acute fasting in mice. Physiological Reports. 10: e15393. PMID 35851583 DOI: 10.14814/phy2.15393  0.089
2018 Bedrani L, Turpin W, Espin-Garcia O, Smith M, Guttman D, Xu W, Croitoru K. A111 ANALYSIS OF GUT MICROBIOME OF HEALTHY INDIVIDUALS THAT GO ON TO DEVELOP CELIAC DISEASE Journal of the Canadian Association of Gastroenterology. 1: 169-169. DOI: 10.1093/jcag/gwy009.111  0.075
2023 Fralick M, Nott C, Moggridge J, Castellani L, Raudanskis A, Guttman DS, Hinz A, Thampi N, Wong A, Manuel D, McGeer A, Doukhanine E, Mejbel H, Zanichelli V, Burella M, et al. Detection of Covid-19 Outbreaks Using Built Environment Testing for SARS-CoV-2. Nejm Evidence. 2: EVIDoa2200203. PMID 38320044 DOI: 10.1056/EVIDoa2200203  0.063
2018 Bedrani L, Turpin W, Smith M, Guttman D, Silverberg MS, Xu W, Paterson A, Croitoru K. A135 MICROBIOME IN CROHN’S DISEASE PATIENTS: A COMPILATION OF PUBLICLY AVAILABLE DATASETS Journal of the Canadian Association of Gastroenterology. 1: 235-235. DOI: 10.1093/jcag/gwy008.136  0.052
2021 Oliva M, Schneeberger PHH, Rey V, Cho M, Taylor R, Hansen AR, Taylor K, Hosni A, Bayley A, Hope AJ, Bratman SV, Ringash J, Singh S, Weinreb I, Perez-Ordoñez B, ... ... Guttman D, et al. Transitions in oral and gut microbiome of HPV+ oropharyngeal squamous cell carcinoma following definitive chemoradiotherapy (ROMA LA-OPSCC study). British Journal of Cancer. PMID 33750907 DOI: 10.1038/s41416-020-01253-1  0.051
2015 Quale DZ, Bangs R, Smith M, Guttman D, Northam T, Winterbottom A, Necchi A, Fiorini E, Demkiw S. Bladder Cancer Patient Advocacy: A Global Perspective. Bladder Cancer (Amsterdam, Netherlands). 1: 117-122. PMID 27398397 DOI: 10.3233/BLC-150021  0.038
2005 Guttman D. A medical student's perspective: selecting the best emergency medicine residency program. The Journal of Emergency Medicine. 28: 105-6. PMID 15657017 DOI: 10.1016/j.jemermed.2004.07.009  0.034
2019 Chung J, Kulkarni GS, Morash R, Matthew A, Papadakos J, Breau RH, Guttman D, Bender J, Jones JM. Assessment of quality of life, information, and supportive care needs in patients with muscle and non-muscle invasive bladder cancer across the illness trajectory. Supportive Care in Cancer : Official Journal of the Multinational Association of Supportive Care in Cancer. PMID 30767131 DOI: 10.1007/s00520-019-4649-z  0.033
2020 Chung J, Maganti M, Kulkarni GS, Morash R, Matthew A, Papadakos J, Breau RH, Guttman D, Bender J, Jones JM. Modifiable Lifestyle Behaviours Impact the Health-Related Quality of Life of Bladder Cancer Survivors. Bju International. PMID 31977152 DOI: 10.1111/bju.15007  0.022
2020 Kassouf W, Aprikian A, Saad F, Fleshner N, Alimohamed N, Breau RH, Brimo F, Chin J, Chung P, Cornacchia T, Devins F, Eapen L, Eigl B, Fairey A, Guttman D, et al. Continuing towards optimization of bladder cancer care in Canada: Summary of the third Bladder Cancer Canada-Canadian Urological Association-Canadian Urologic Oncology Group (BCC-CUA-CUOG) bladder cancer quality of care consensus meeting. Canadian Urological Association Journal = Journal De L'Association Des Urologues Du Canada. 14: E115-E125. PMID 32453694 DOI: 10.5489/Cuaj.6378  0.012
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