| Year |
Citation |
Score |
| 2023 |
Song B, Buckler ES, Stitzer MC. New whole-genome alignment tools are needed for tapping into plant diversity. Trends in Plant Science. PMID 37749022 DOI: 10.1016/j.tplants.2023.08.013 |
0.346 |
|
| 2023 |
Lima DC, Aviles AC, Alpers RT, Perkins A, Schoemaker DL, Costa M, Michel KJ, Kaeppler S, Ertl D, Romay MC, Gage JL, Holland J, Beissinger T, Bohn M, Buckler E, et al. 2020-2021 field seasons of Maize GxE project within the Genomes to Fields Initiative. Bmc Research Notes. 16: 219. PMID 37710302 DOI: 10.1186/s13104-023-06430-y |
0.61 |
|
| 2023 |
Lima DC, Washburn JD, Varela JI, Chen Q, Gage JL, Romay MC, Holland J, Ertl D, Lopez-Cruz M, Aguate FM, de Los Campos G, Kaeppler S, Beissinger T, Bohn M, Buckler E, et al. Genomes to Fields 2022 Maize genotype by Environment Prediction Competition. Bmc Research Notes. 16: 148. PMID 37461058 DOI: 10.1186/s13104-023-06421-z |
0.602 |
|
| 2023 |
Wu Y, Li D, Hu Y, Li H, Ramstein GP, Zhou S, Zhang X, Bao Z, Zhang Y, Song B, Zhou Y, Zhou Y, Gagnon E, Särkinen T, Knapp S, ... ... Buckler ES, et al. Phylogenomic discovery of deleterious mutations facilitates hybrid potato breeding. Cell. PMID 37146612 DOI: 10.1016/j.cell.2023.04.008 |
0.338 |
|
| 2023 |
Ribeiro CAG, de Sousa Tinoco SM, de Souza VF, Negri BF, Gault CM, Pastina MM, Magalhaes JV, Guimarães LJM, de Barros EG, Buckler ES, Guimaraes CT. Genome-Wide Association Study for Root Morphology and Phosphorus Acquisition Efficiency in Diverse Maize Panels. International Journal of Molecular Sciences. 24. PMID 37047206 DOI: 10.3390/ijms24076233 |
0.337 |
|
| 2023 |
Phillips AR, Seetharam AS, Albert PS, AuBuchon-Elder T, Birchler JA, Buckler ES, Gillespie LJ, Hufford MB, Llaca V, Romay MC, Soreng RJ, Kellogg EA, Ross-Ibarra J. A happy accident: a novel turfgrass reference genome. G3 (Bethesda, Md.). PMID 37002915 DOI: 10.1093/g3journal/jkad073 |
0.605 |
|
| 2023 |
Khaipho-Burch M, Ferebee T, Giri A, Ramstein G, Monier B, Yi E, Romay MC, Buckler ES. Elucidating the patterns of pleiotropy and its biological relevance in maize. Plos Genetics. 19: e1010664. PMID 36943844 DOI: 10.1371/journal.pgen.1010664 |
0.469 |
|
| 2023 |
Pardo J, Wai CM, Harman M, Nguyen A, Kremling KA, Romay MC, Lepak N, Bauerle TL, Buckler ES, Thompson AM, VanBuren R. Cross-species predictive modeling reveals conserved drought responses between maize and sorghum. Proceedings of the National Academy of Sciences of the United States of America. 120: e2216894120. PMID 36848555 DOI: 10.1073/pnas.2216894120 |
0.313 |
|
| 2022 |
Oren E, Dafna A, Tzuri G, Halperin I, Isaacson T, Elkabetz M, Meir A, Saar U, Ohali S, La T, Romay C, Tadmor Y, Schaffer AA, Buckler ES, Cohen R, et al. Pan-genome and multi-parental framework for high-resolution trait dissection in melon (Cucumis melo). The Plant Journal : For Cell and Molecular Biology. PMID 36353749 DOI: 10.1111/tpj.16021 |
0.459 |
|
| 2022 |
Ramstein GP, Buckler ES. Prediction of evolutionary constraint by genomic annotations improves functional prioritization of genomic variants in maize. Genome Biology. 23: 183. PMID 36050782 DOI: 10.1186/s13059-022-02747-2 |
0.427 |
|
| 2022 |
Barnes AC, Rodríguez-Zapata F, Juárez-Núñez KA, Gates DJ, Janzen GM, Kur A, Wang L, Jensen SE, Estévez-Palmas JM, Crow TM, Kavi HS, Pil HD, Stokes RL, Knizner KT, Aguilar-Rangel MR, ... ... Buckler ES, et al. An adaptive teosinte introgression modulates phosphatidylcholine levels and is associated with maize flowering time. Proceedings of the National Academy of Sciences of the United States of America. 119: e2100036119. PMID 35771940 DOI: 10.1073/pnas.2100036119 |
0.421 |
|
| 2022 |
Wu Y, Johnson L, Song B, Romay C, Stitzer M, Siepel A, Buckler E, Scheben A. A multiple alignment workflow shows the effect of repeat masking and parameter tuning on alignment in plants. The Plant Genome. e20204. PMID 35416423 DOI: 10.1002/tpg2.20204 |
0.305 |
|
| 2022 |
Oren E, Tzuri G, Dafna A, Rees ER, Song B, Freilich S, Elkind Y, Isaacson T, Schaffer AA, Tadmor Y, Burger J, Buckler ES, Gur A. QTL mapping and genomic analyses of earliness and fruit ripening traits in a melon Recombinant Inbred Lines population supported by de novo assembly of their parental genomes. Horticulture Research. PMID 35043206 DOI: 10.1093/hr/uhab081 |
0.447 |
|
| 2022 |
Song B, Marco-Sola S, Moreto M, Johnson L, Buckler ES, Stitzer MC. AnchorWave: Sensitive alignment of genomes with high sequence diversity, extensive structural polymorphism, and whole-genome duplication. Proceedings of the National Academy of Sciences of the United States of America. 119. PMID 34934012 DOI: 10.1073/pnas.2113075119 |
0.342 |
|
| 2021 |
Samayoa LF, Olukolu BA, Yang CJ, Chen Q, Stetter MG, York AM, Sanchez-Gonzalez JJ, Glaubitz JC, Bradbury PJ, Romay MC, Sun Q, Yang J, Ross-Ibarra J, Buckler ES, Doebley JF, et al. Domestication reshaped the genetic basis of inbreeding depression in a maize landrace compared to its wild relative, teosinte. Plos Genetics. 17: e1009797. PMID 34928949 DOI: 10.1371/journal.pgen.1009797 |
0.328 |
|
| 2021 |
Baseggio M, Murray M, Wu D, Ziegler G, Kaczmar N, Chamness J, Hamilton JP, Buell CR, Vatamaniuk OK, Buckler ES, Smith ME, Baxter I, Tracy WF, Gore MA. Genome-wide association study suggests an independent genetic basis of zinc and cadmium concentrations in fresh sweet corn kernels. G3 (Bethesda, Md.). 11. PMID 34849806 DOI: 10.1093/g3journal/jkab186 |
0.639 |
|
| 2021 |
Long EM, Bradbury PJ, Romay MC, Buckler ES, Robbins KR. Genome-wide Imputation Using the Practical Haplotype Graph in the Heterozygous Crop Cassava. G3 (Bethesda, Md.). PMID 34751380 DOI: 10.1093/g3journal/jkab383 |
0.348 |
|
| 2021 |
Chen Q, Samayoa LF, Yang CJ, Olukolu BA, York AM, Sanchez-Gonzalez JJ, Xue W, Glaubitz JC, Bradbury PJ, Romay MC, Sun Q, Buckler ES, Holland JB, Doebley JF. A conserved genetic architecture among populations of the maize progenitor, teosinte, was radically altered by domestication. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34686607 DOI: 10.1073/pnas.2112970118 |
0.38 |
|
| 2021 |
Zhang X, Zhu Y, Kremling KAG, Romay MC, Bukowski R, Sun Q, Gao S, Buckler ES, Lu F. Genome-wide analysis of deletions in maize population reveals abundant genetic diversity and functional impact. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 34661697 DOI: 10.1007/s00122-021-03965-1 |
0.474 |
|
| 2021 |
Pignon CP, Fernandes SB, Valluru R, Bandillo N, Lozano R, Buckler E, Gore MA, Long SP, Brown PJ, Leakey ADB. Phenotyping stomatal closure by thermal imaging for GWAS and TWAS of water use efficiency-related genes. Plant Physiology. PMID 34618072 DOI: 10.1093/plphys/kiab395 |
0.646 |
|
| 2021 |
Ferguson JN, Fernandes SB, Monier B, Miller ND, Allen D, Dmitrieva A, Schmuker P, Lozano R, Valluru R, Buckler ES, Gore MA, Brown PJ, Spalding EP, Leakey ADB. Machine learning-enabled phenotyping for GWAS and TWAS of WUE traits in 869 field-grown sorghum accessions. Plant Physiology. PMID 34618065 DOI: 10.1093/plphys/kiab346 |
0.693 |
|
| 2021 |
Giri A, Khaipho-Burch M, Buckler ES, Ramstein GP. Haplotype associated RNA expression (HARE) improves prediction of complex traits in maize. Plos Genetics. 17: e1009568. PMID 34606492 DOI: 10.1371/journal.pgen.1009568 |
0.376 |
|
| 2021 |
Lozano R, Booth GT, Omar BY, Li B, Buckler ES, Lis JT, Del Carpio DP, Jannink JL. RNA polymerase mapping in plants identifies intergenic regulatory elements enriched in causal variants. G3 (Bethesda, Md.). PMID 34499719 DOI: 10.1093/g3journal/jkab273 |
0.312 |
|
| 2021 |
Wu X, Feng H, Wu D, Yan S, Zhang P, Wang W, Zhang J, Ye J, Dai G, Fan Y, Li W, Song B, Geng Z, Yang W, Chen G, ... ... Buckler E, et al. Using high-throughput multiple optical phenotyping to decipher the genetic architecture of maize drought tolerance. Genome Biology. 22: 185. PMID 34162419 DOI: 10.1186/s13059-021-02377-0 |
0.329 |
|
| 2021 |
Wang L, Huang Y, Liu Z, He J, Jiang X, He F, Lu Z, Yang S, Chen P, Yu H, Zeng B, Ke L, Xie Z, Larkin RM, Jiang D, ... ... Buckler ES, et al. Somatic variations led to the selection of acidic and acidless orange cultivars. Nature Plants. PMID 34140668 DOI: 10.1038/s41477-021-00941-x |
0.451 |
|
| 2021 |
Song B, Buckler ES, Wang H, Wu Y, Rees E, Kellogg EA, Gates DJ, Khaipho-Burch M, Bradbury PJ, Ross-Ibarra J, Hufford MB, Romay MC. Conserved noncoding sequences provide insights into regulatory sequence and loss of gene expression in maize. Genome Research. PMID 34045362 DOI: 10.1101/gr.266528.120 |
0.49 |
|
| 2021 |
Dafna A, Halperin I, Oren E, Isaacson T, Tzuri G, Meir A, Schaffer AA, Burger J, Tadmor Y, Buckler ES, Gur A. Underground Heterosis for Melons Yield. Journal of Experimental Botany. PMID 33993257 DOI: 10.1093/jxb/erab219 |
0.399 |
|
| 2021 |
Swarts K, Bauer E, Glaubitz JC, Ho T, Johnson L, Li Y, Li Y, Miller Z, Romay C, Schön CC, Wang T, Zhang Z, Buckler ES, Bradbury P. Joint analysis of days to flowering reveals independent temperate adaptations in maize. Heredity. PMID 33888874 DOI: 10.1038/s41437-021-00422-z |
0.343 |
|
| 2021 |
Blanc J, Kremling KAG, Buckler E, Josephs EB. Local adaptation contributes to gene expression divergence in maize. G3 (Bethesda, Md.). 11. PMID 33604670 DOI: 10.1093/g3journal/jkab004 |
0.305 |
|
| 2021 |
Rogers AR, Dunne JC, Romay C, Bohn M, Buckler ES, Ciampitti IA, Edwards J, Ertl D, Flint-Garcia S, Gore MA, Graham C, Hirsch CN, Hood E, Hooker DC, Knoll J, et al. The importance of dominance and genotype-by-environment interactions on grain yield variation in a large-scale public cooperative maize experiment. G3 (Bethesda, Md.). 11. PMID 33585867 DOI: 10.1093/g3journal/jkaa050 |
0.672 |
|
| 2021 |
Lozano R, Gazave E, Dos Santos JPR, Stetter MG, Valluru R, Bandillo N, Fernandes SB, Brown PJ, Shakoor N, Mockler TC, Cooper EA, Taylor Perkins M, Buckler ES, Ross-Ibarra J, Gore MA. Comparative evolutionary genetics of deleterious load in sorghum and maize. Nature Plants. 7: 17-24. PMID 33452486 DOI: 10.1038/s41477-020-00834-5 |
0.706 |
|
| 2020 |
Jarquin D, de Leon N, Romay C, Bohn M, Buckler ES, Ciampitti I, Edwards J, Ertl D, Flint-Garcia S, Gore MA, Graham C, Hirsch CN, Holland JB, Hooker D, Kaeppler SM, et al. Utility of Climatic Information via Combining Ability Models to Improve Genomic Prediction for Yield Within the Genomes to Fields Maize Project. Frontiers in Genetics. 11: 592769. PMID 33763106 DOI: 10.3389/fgene.2020.592769 |
0.647 |
|
| 2020 |
Diepenbrock CH, Ilut DC, Magallanes-Lundback M, Kandianis CB, Lipka AE, Bradbury PJ, Holland JB, Hamilton JP, Wooldridge E, Vaillancourt B, Góngora-Castillo E, Wallace JG, Cepela J, Mateos-Hernandez M, Owens BF, ... ... Buckler ES, et al. Eleven biosynthetic genes explain the majority of natural variation in carotenoid levels in maize grain. The Plant Cell. PMID 33681994 DOI: 10.1093/plcell/koab032 |
0.8 |
|
| 2020 |
Baseggio M, Murray M, Magallanes-Lundback M, Kaczmar N, Chamness J, Buckler ES, Smith ME, DellaPenna D, Tracy WF, Gore MA. Natural variation for carotenoids in fresh kernels is controlled by uncommon variants in sweet corn. The Plant Genome. 13: e20008. PMID 33016632 DOI: 10.1002/Tpg2.20008 |
0.766 |
|
| 2020 |
Jensen SE, Charles JR, Muleta K, Bradbury PJ, Casstevens T, Deshpande SP, Gore MA, Gupta R, Ilut DC, Johnson L, Lozano R, Miller Z, Ramu P, Rathore A, Romay MC, ... ... Buckler ES, et al. A sorghum practical haplotype graph facilitates genome-wide imputation and cost-effective genomic prediction. The Plant Genome. 13: e20009. PMID 33016627 DOI: 10.1002/Tpg2.20009 |
0.682 |
|
| 2020 |
Chen Q, Samayoa LF, Yang CJ, Bradbury PJ, Olukolu BA, Neumeyer MA, Romay MC, Sun Q, Lorant A, Buckler ES, Ross-Ibarra J, Holland JB, Doebley JF. The genetic architecture of the maize progenitor, teosinte, and how it was altered during maize domestication. Plos Genetics. 16: e1008791. PMID 32407310 DOI: 10.1371/Journal.Pgen.1008791 |
0.552 |
|
| 2020 |
Gage JL, Monier B, Giri A, Buckler ES. Ten Years of the maize Nested Association Mapping Population: Impact, Limitations, and Future Directions. The Plant Cell. PMID 32398275 DOI: 10.1105/Tpc.19.00951 |
0.495 |
|
| 2020 |
Ramstein GP, Larsson SJ, Cook JP, Edwards JW, Ersoz ES, Flint-Garcia S, Gardner CA, Holland JB, Lorenz AJ, McMullen MD, Millard MJ, Rocheford TR, Tuinstra MR, Bradbury PJ, Buckler ES, et al. Dominance Effects and Functional Enrichments Improve Prediction of Agronomic Traits in Hybrid Maize. Genetics. PMID 32152047 DOI: 10.1534/Genetics.120.303025 |
0.788 |
|
| 2020 |
McFarland BA, AlKhalifah N, Bohn M, Bubert J, Buckler ES, Ciampitti I, Edwards J, Ertl D, Gage JL, Falcon CM, Flint-Garcia S, Gore MA, Graham C, Hirsch CN, Holland JB, et al. Maize genomes to fields (G2F): 2014-2017 field seasons: genotype, phenotype, climatic, soil, and inbred ear image datasets. Bmc Research Notes. 13: 71. PMID 32051026 DOI: 10.1186/S13104-020-4922-8 |
0.661 |
|
| 2020 |
Ricci WA, Lu Z, Ji L, Marand AP, Ethridge CL, Murphy NG, Noshay JM, Galli M, Mejía-Guerra MK, Colomé-Tatché M, Johannes F, Rowley MJ, Corces VG, Zhai J, Scanlon MJ, ... Buckler ES, et al. Author Correction: Widespread long-range cis-regulatory elements in the maize genome. Nature Plants. PMID 32029893 DOI: 10.1038/S41477-020-0600-Z |
0.321 |
|
| 2020 |
Wang H, Cimen E, Singh N, Buckler E. Deep learning for plant genomics and crop improvement. Current Opinion in Plant Biology. 54: 34-41. PMID 31986354 DOI: 10.1016/J.Pbi.2019.12.010 |
0.546 |
|
| 2020 |
Baseggio M, Murray M, Magallanes‐Lundback M, Kaczmar N, Chamness J, Buckler ES, Smith ME, DellaPenna D, Tracy WF, Gore MA. Natural variation for carotenoids in fresh kernels is controlled by uncommon variants in sweet corn The Plant Genome. 13. DOI: 10.1002/tpg2.20008 |
0.713 |
|
| 2020 |
Falcon CM, Kaeppler SM, Spalding EP, Miller ND, Haase N, AlKhalifah N, Bohn M, Buckler ES, Campbell DA, Ciampitti I, Coffey L, Edwards J, Ertl D, Flint‐Garcia S, Gore MA, et al. Relative utility of agronomic, phenological, and morphological traits for assessing genotype‐by‐environment interaction in maize inbreds Crop Science. 60: 62-81. DOI: 10.1002/Csc2.20035 |
0.614 |
|
| 2019 |
Dos Santos JPR, Fernandes SB, Lozano R, Brown PJ, Buckler ES, Garcia AAF, Gore MA. Novel Bayesian Networks for Genomic Prediction of Developmental Traits in Biomass Sorghum. G3 (Bethesda, Md.). PMID 31852730 DOI: 10.1534/G3.119.400759 |
0.659 |
|
| 2019 |
Ricci WA, Lu Z, Ji L, Marand AP, Ethridge CL, Murphy NG, Noshay JM, Galli M, Mejía-Guerra MK, Colomé-Tatché M, Johannes F, Rowley MJ, Corces VG, Zhai J, Scanlon MJ, ... Buckler ES, et al. Widespread long-range cis-regulatory elements in the maize genome. Nature Plants. PMID 31740773 DOI: 10.1038/S41477-019-0547-0 |
0.511 |
|
| 2019 |
Ding Y, Murphy KM, Poretsky E, Mafu S, Yang B, Char SN, Christensen SA, Saldivar E, Wu M, Wang Q, Ji L, Schmitz RJ, Kremling KA, Buckler ES, Shen Z, et al. Multiple genes recruited from hormone pathways partition maize diterpenoid defences. Nature Plants. PMID 31527844 DOI: 10.1038/S41477-019-0509-6 |
0.343 |
|
| 2019 |
Kremling KAG, Diepenbrock CH, Gore MA, Buckler ES, Bandillo NB. ----Transcriptome-Wide Association Supplements Genome-Wide Association in . G3 (Bethesda, Md.). PMID 31337639 DOI: 10.1534/G3.119.400549 |
0.751 |
|
| 2019 |
Oren E, Tzuri G, Vexler L, Dafna A, Meir A, Faigenboim A, Kenigswald M, Portnoy V, Schaffer AA, Levi A, Buckler ES, Katzir N, Burger J, Tadmor Y, Gur A. The multi-allelic APRR2 gene is associated with fruit pigment accumulation in melon and watermelon. Journal of Experimental Botany. PMID 31175368 DOI: 10.1093/Jxb/Erz182 |
0.491 |
|
| 2019 |
Baseggio M, Murray M, Magallanes-Lundback M, Kaczmar N, Chamness J, Buckler ES, Smith ME, DellaPenna D, Tracy WF, Gore MA. Genome-Wide Association and Genomic Prediction Models of Tocochromanols in Fresh Sweet Corn Kernels. The Plant Genome. 12. PMID 30951088 DOI: 10.3835/Plantgenome2018.06.0038 |
0.801 |
|
| 2019 |
Zhou S, Kremling K, Bandillo N, Richter A, Zhang YK, Ahern KR, Artyukhin AB, Hui JX, Younkin GC, Schroeder FC, Buckler ES, Jander G. Metabolome-scale genome-wide association studies reveal chemical diversity and genetic control of maize specialized metabolites. The Plant Cell. PMID 30923231 DOI: 10.1105/Tpc.18.00772 |
0.538 |
|
| 2019 |
Mejía-Guerra MK, Buckler ES. A k-mer grammar analysis to uncover maize regulatory architecture. Bmc Plant Biology. 19: 103. PMID 30876396 DOI: 10.1186/S12870-019-1693-2 |
0.404 |
|
| 2019 |
Yang CJ, Samayoa LF, Bradbury PJ, Olukolu BA, Xue W, York AM, Tuholski MR, Wang W, Daskalska LL, Neumeyer MA, Sanchez-Gonzalez JJ, Romay MC, Glaubitz JC, Sun Q, Buckler ES, et al. The genetic architecture of teosinte catalyzed and constrained maize domestication. Proceedings of the National Academy of Sciences of the United States of America. PMID 30842282 DOI: 10.1073/Pnas.1820997116 |
0.532 |
|
| 2019 |
Washburn JD, Mejia-Guerra MK, Ramstein G, Kremling KA, Valluru R, Buckler ES, Wang H. Evolutionarily informed deep learning methods for predicting relative transcript abundance from DNA sequence. Proceedings of the National Academy of Sciences of the United States of America. PMID 30842277 DOI: 10.1073/Pnas.1814551116 |
0.469 |
|
| 2019 |
Valluru R, Gazave EE, Fernandes SB, Ferguson JN, Lozano R, Hirannaiah P, Zuo T, Brown PJ, Leakey ADB, Gore MA, Buckler ES, Bandillo N. Deleterious Mutation Burden and its Association with Complex Traits in Sorghum (). Genetics. PMID 30622134 DOI: 10.1534/Genetics.118.301742 |
0.706 |
|
| 2019 |
Gage JL, Richards E, Lepak N, Kaczmar N, Soman C, Chowdhary G, Gore MA, Buckler ES. In‐Field Whole‐Plant Maize Architecture Characterized by Subcanopy Rovers and Latent Space Phenotyping The Plant Phenome Journal. 2: 1-11. DOI: 10.2135/tppj2019.07.0011 |
0.529 |
|
| 2018 |
Ramstein GP, Jensen SE, Buckler ES. Breaking the curse of dimensionality to identify causal variants in Breeding 4. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 30547185 DOI: 10.1007/S00122-018-3267-3 |
0.468 |
|
| 2018 |
Gault CM, Kremling KA, Buckler ES. De novo Transcriptome Assemblies Reveal Parallel Gene Evolution with Maize after Ancient Polyploidy. The Plant Genome. 11. PMID 30512036 DOI: 10.3835/Plantgenome2018.02.0012 |
0.432 |
|
| 2018 |
Zhou S, Zhang YK, Kremling KA, Ding Y, Bennett JS, Bae JS, Kim DK, Ackerman HH, Kolomiets MV, Schmelz EA, Schroeder FC, Buckler ES, Jander G. Ethylene signaling regulates natural variation in the abundance of antifungal acetylated diferuloylsucroses and Fusarium graminearum resistance in maize seedling roots. The New Phytologist. PMID 30289553 DOI: 10.1111/Nph.15520 |
0.375 |
|
| 2018 |
Wallace JG, Rodgers-Melnick E, Buckler ES. On the Road to Breeding 4.0: Unraveling the Good, the Bad, and the Boring of Crop Quantitative Genomics. Annual Review of Genetics. PMID 30285496 DOI: 10.1146/Annurev-Genet-120116-024846 |
0.486 |
|
| 2018 |
Li B, Kremling K, Wu P, Bukowski R, Romay M, Xie E, Buckler E, Chen M. Co-regulation of ribosomal RNA with hundreds of genes contributes to phenotypic variations. Genome Research. PMID 30166407 DOI: 10.1101/Gr.229716.117 |
0.419 |
|
| 2018 |
Springer NM, Anderson SN, Andorf CM, Ahern KR, Bai F, Barad O, Barbazuk WB, Bass HW, Baruch K, Ben-Zvi G, Buckler ES, Bukowski R, Campbell MS, Cannon EKS, Chomet P, et al. The maize W22 genome provides a foundation for functional genomics and transposon biology. Nature Genetics. PMID 30061736 DOI: 10.1038/S41588-018-0158-0 |
0.477 |
|
| 2018 |
Sun S, Zhou Y, Chen J, Shi J, Zhao H, Zhao H, Song W, Zhang M, Cui Y, Dong X, Liu H, Ma X, Jiao Y, Wang B, Wei X, ... ... Buckler ES, et al. Extensive intraspecific gene order and gene structural variations between Mo17 and other maize genomes. Nature Genetics. PMID 30061735 DOI: 10.1038/S41588-018-0182-0 |
0.481 |
|
| 2018 |
AlKhalifah N, Campbell DA, Falcon CM, Gardiner JM, Miller ND, Romay MC, Walls R, Walton R, Yeh CT, Bohn M, Bubert J, Buckler ES, Ciampitti I, Flint-Garcia S, Gore MA, et al. Maize Genomes to Fields: 2014 and 2015 field season genotype, phenotype, environment, and inbred ear image datasets. Bmc Research Notes. 11: 452. PMID 29986751 DOI: 10.1186/S13104-018-3508-1 |
0.679 |
|
| 2018 |
Walters WA, Jin Z, Youngblut N, Wallace JG, Sutter J, Zhang W, González-Peña A, Peiffer J, Koren O, Shi Q, Knight R, Glavina Del Rio T, Tringe SG, Buckler ES, Dangl JL, et al. Large-scale replicated field study of maize rhizosphere identifies heritable microbes. Proceedings of the National Academy of Sciences of the United States of America. PMID 29941552 DOI: 10.1073/Pnas.1800918115 |
0.411 |
|
| 2018 |
Wang J, Zhou Z, Zhang Z, Li H, Liu D, Zhang Q, Bradbury PJ, Buckler ES, Zhang Z. Expanding the BLUP alphabet for genomic prediction adaptable to the genetic architectures of complex traits. Heredity. PMID 29765161 DOI: 10.1038/S41437-018-0075-0 |
0.506 |
|
| 2018 |
Li YX, Chen L, Li C, Bradbury PJ, Shi YS, Song Y, Zhang D, Zhang Z, Buckler ES, Li Y, Wang T. Increased experimental conditions and marker densities identified more genetic loci associated with southern and northern leaf blight resistance in maize. Scientific Reports. 8: 6848. PMID 29717181 DOI: 10.1038/S41598-018-25304-Z |
0.463 |
|
| 2018 |
Kremling KAG, Chen SY, Su MH, Lepak NK, Romay MC, Swarts KL, Lu F, Lorant A, Bradbury PJ, Buckler ES. Dysregulation of expression correlates with rare-allele burden and fitness loss in maize. Nature. PMID 29539638 DOI: 10.1038/Nature25966 |
0.518 |
|
| 2018 |
Clohessy JW, Pauli D, Kreher KM, Buckler ES, Armstrong PR, Wu T, Hoekenga OA, Jannink J, Sorrells ME, Gore MA. A Low‐Cost Automated System for High‐Throughput Phenotyping of Single Oat Seeds The Plant Phenome Journal. 1: 1-13. DOI: 10.2135/TPPJ2018.07.0005 |
0.573 |
|
| 2018 |
Wallace JG, Kremling KA, Kovar LL, Buckler ES. Quantitative Genetics of the Maize Leaf Microbiome Phytobiomes Journal. 2: 208-224. DOI: 10.1094/PBIOMES-02-18-0008-R |
0.342 |
|
| 2018 |
Varshney RK, Shi C, Thudi M, Mariac C, Wallace J, Qi P, Zhang H, Zhao Y, Wang X, Rathore A, Srivastava RK, Chitikineni A, Fan G, Bajaj P, Punnuri S, ... ... Buckler E, et al. Erratum: Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments Nature Biotechnology. 36: 368-368. DOI: 10.1038/nbt0418-368d |
0.352 |
|
| 2017 |
Bukowski R, Guo X, Lu Y, Zou C, He B, Rong Z, Wang B, Xu D, Yang B, Xie C, Fan L, Gao S, Xu X, Zhang G, Li Y, ... ... Buckler ES, et al. Construction of the third generation Zea mays haplotype map. Gigascience. PMID 29300887 DOI: 10.1093/Gigascience/Gix134 |
0.537 |
|
| 2017 |
Zhang D, Easterling KA, Pitra NJ, Coles MC, Buckler ES, Bass HW, Matthews PD. Non-Mendelian Single-Nucleotide Polymorphism Inheritance and Atypical Meiotic Configurations are Prevalent in Hop. The Plant Genome. 10. PMID 29293819 DOI: 10.3835/Plantgenome2017.04.0032 |
0.533 |
|
| 2017 |
Jones MW, Penning BW, Jamann TM, Glaubitz JC, Romay C, Buckler ES, Redinbaugh M. Diverse chromosomal locations of quantitative trait loci for tolerance to maize chlorotic mottle virus in five maize populations. Phytopathology. PMID 29287150 DOI: 10.1094/Phyto-09-17-0321-R |
0.45 |
|
| 2017 |
Gage JL, Jarquin D, Romay C, Lorenz A, Buckler ES, Kaeppler S, Alkhalifah N, Bohn M, Campbell DA, Edwards J, Ertl D, Flint-Garcia S, Gardiner J, Good B, Hirsch CN, et al. The effect of artificial selection on phenotypic plasticity in maize. Nature Communications. 8: 1348. PMID 29116144 DOI: 10.1038/S41467-017-01450-2 |
0.475 |
|
| 2017 |
He Y, Wang M, Dukowic-Schulze S, Zhou A, Tiang CL, Shilo S, Sidhu GK, Eichten S, Bradbury P, Springer NM, Buckler ES, Levy AA, Sun Q, Pillardy J, Kianian PMA, et al. Genomic features shaping the landscape of meiotic double-strand-break hotspots in maize. Proceedings of the National Academy of Sciences of the United States of America. PMID 29087335 DOI: 10.1073/Pnas.1713225114 |
0.401 |
|
| 2017 |
Diepenbrock CH, Kandianis CB, Lipka AE, Magallanes-Lundback M, Vaillancourt B, Góngora-Castillo E, Wallace JG, Cepela J, Mesberg A, Bradbury P, Ilut DC, Mateos-Hernandez M, Hamilton J, Owens BF, Tiede T, ... Buckler ES, et al. Novel Loci Underlie Natural Variation in Vitamin E Levels in Maize Grain. The Plant Cell. PMID 28970338 DOI: 10.1105/Tpc.17.00475 |
0.774 |
|
| 2017 |
Yang J, Mezmouk S, Baumgarten A, Buckler ES, Guill KE, McMullen MD, Mumm RH, Ross-Ibarra J. Incomplete dominance of deleterious alleles contributes substantially to trait variation and heterosis in maize. Plos Genetics. 13: e1007019. PMID 28953891 DOI: 10.1371/Journal.Pgen.1007019 |
0.529 |
|
| 2017 |
Varshney RK, Shi C, Thudi M, Mariac C, Wallace J, Qi P, Zhang H, Zhao Y, Wang X, Rathore A, Srivastava RK, Chitikineni A, Fan G, Bajaj P, Punnuri S, ... ... Buckler E, et al. Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. PMID 28922347 DOI: 10.1038/Nbt.3943 |
0.56 |
|
| 2017 |
Migicovsky Z, Sawler J, Gardner KM, Aradhya MK, Prins BH, Schwaninger HR, Bustamante CD, Buckler ES, Zhong GY, Brown PJ, Myles S. Patterns of genomic and phenomic diversity in wine and table grapes. Horticulture Research. 4: 17035. PMID 28791127 DOI: 10.1038/Hortres.2017.35 |
0.48 |
|
| 2017 |
Swarts K, Gutaker RM, Benz B, Blake M, Bukowski R, Holland J, Kruse-Peeples M, Lepak N, Prim L, Romay MC, Ross-Ibarra J, Sanchez-Gonzalez JJ, Schmidt C, Schuenemann VJ, Krause J, ... ... Buckler ES, et al. Genomic estimation of complex traits reveals ancient maize adaptation to temperate North America. Science (New York, N.Y.). 357: 512-515. PMID 28774930 DOI: 10.1126/Science.Aam9425 |
0.798 |
|
| 2017 |
Strable J, Wallace JG, Unger-Wallace E, Briggs S, Bradbury P, Buckler ES, Vollbrecht E. Maize YABBY Genes drooping leaf1 and drooping leaf2 Regulate Plant Architecture. The Plant Cell. PMID 28698237 DOI: 10.1105/Tpc.16.00477 |
0.516 |
|
| 2017 |
Navarro JAR, Wilcox M, Burgueño J, Romay C, Swarts K, Trachsel S, Preciado E, Terron A, Delgado HV, Vidal V, Ortega A, Banda AE, Montiel NOG, Ortiz-Monasterio I, Vicente FS, ... ... Buckler ES, et al. Corrigendum: A study of allelic diversity underlying flowering-time adaptation in maize landraces. Nature Genetics. 49: 970. PMID 28546574 DOI: 10.1038/Ng0617-970C |
0.346 |
|
| 2017 |
Zhang X, Pérez-Rodríguez P, Burgueño J, Olsen M, Buckler E, Atlin G, Prasanna BM, Vargas M, San Vicente F, Crossa J. Rapid Cycling Genomic Selection in a Multi-parental Tropical Maize Population. G3 (Bethesda, Md.). PMID 28533335 DOI: 10.1534/G3.117.043141 |
0.391 |
|
| 2017 |
Ramu P, Esuma W, Kawuki R, Rabbi IY, Egesi C, Bredeson JV, Bart RS, Verma J, Buckler ES, Lu F. Cassava haplotype map highlights fixation of deleterious mutations during clonal propagation. Nature Genetics. PMID 28416819 DOI: 10.1038/Ng.3845 |
0.333 |
|
| 2017 |
Romero Navarro JA, Wilcox M, Burgueño J, Romay C, Swarts K, Trachsel S, Preciado E, Terron A, Delgado HV, Vidal V, Ortega A, Banda AE, Montiel NO, Ortiz-Monasterio I, Vicente FS, ... ... Buckler ES, et al. A study of allelic diversity underlying flowering-time adaptation in maize landraces. Nature Genetics. PMID 28166212 DOI: 10.1038/Ng.3784 |
0.55 |
|
| 2016 |
Tang Y, Liu X, Wang J, Li M, Wang Q, Tian F, Su Z, Pan Y, Liu D, Lipka AE, Buckler ES, Zhang Z. GAPIT Version 2: An Enhanced Integrated Tool for Genomic Association and Prediction. The Plant Genome. 9. PMID 27898829 DOI: 10.3835/Plantgenome2015.11.0120 |
0.444 |
|
| 2016 |
Punnuri SM, Wallace JG, Knoll JE, Hyma KE, Mitchell SE, Buckler ES, Varshney RK, Singh BP. Development of a High-Density Linkage Map and Tagging Leaf Spot Resistance in Pearl Millet Using Genotyping-by-Sequencing Markers. The Plant Genome. 9. PMID 27898821 DOI: 10.3835/Plantgenome2015.10.0106 |
0.48 |
|
| 2016 |
Li C, Sun B, Li Y, Liu C, Wu X, Zhang D, Shi Y, Song Y, Buckler ES, Zhang Z, Wang T, Li Y. Numerous genetic loci identified for drought tolerance in the maize nested association mapping populations. Bmc Genomics. 17: 894. PMID 27825295 DOI: 10.1186/S12864-016-3170-8 |
0.404 |
|
| 2016 |
Hirsch C, Hirsch CD, Brohammer AB, Bowman MJ, Soifer I, Barad O, Shem-Tov D, Baruch K, Lu F, Hernandez AG, Fields CJ, Wright CL, Koehler K, Springer NM, Buckler ES, et al. Draft Assembly of Elite Inbred Line PH207 Provides Insights into Genomic and Transcriptome Diversity in Maize. The Plant Cell. PMID 27803309 DOI: 10.1105/Tpc.16.00353 |
0.467 |
|
| 2016 |
Richter A, Schaff C, Zhang Z, Lipka AE, Tian F, Köllner TG, Schnee C, Preiss S, Irmisch S, Jander G, Boland W, Gershenzon J, Buckler ES, Degenhardt J. Characterization of biosynthetic pathways for the production of the volatile homoterpenes DMNT and TMTT in Zea mays. The Plant Cell. PMID 27662898 DOI: 10.1105/Tpc.15.00919 |
0.421 |
|
| 2016 |
McCaw ME, Wallace JG, Albert PS, Buckler ES, Birchler JA. Fast-Flowering Mini-Maize: Seed to Seed in 60 Days. Genetics. PMID 27440866 DOI: 10.1534/Genetics.116.191726 |
0.62 |
|
| 2016 |
Li C, Li Y, Shi Y, Song Y, Zhang D, Buckler ES, Zhang Z, Li Y, Wang T. Analysis of recombination QTLs, segregation distortion, and epistasis for fitness in maize multiple populations using ultra-high-density markers. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 27379519 DOI: 10.1007/S00122-016-2739-6 |
0.532 |
|
| 2016 |
Handrick V, Robert CA, Ahern KR, Zhou S, Machado RA, Maag D, Glauser G, Fernandez-Penny FE, Chandran JN, Rodgers-Melnik E, Schneider B, Buckler ES, Boland W, Gershenzon J, Jander G, et al. Biosynthesis of 8-O-Methylated Benzoxazinoid Defense Compounds in Maize. The Plant Cell. 28: 1682-700. PMID 27317675 DOI: 10.1105/Tpc.16.00065 |
0.314 |
|
| 2016 |
Rodgers-Melnick E, Vera DL, Bass HW, Buckler ES. Open chromatin reveals the functional maize genome. Proceedings of the National Academy of Sciences of the United States of America. PMID 27185945 DOI: 10.1073/Pnas.1525244113 |
0.469 |
|
| 2016 |
Li YX, Li C, Bradbury PJ, Liu X, Lu F, Romay MC, Glaubitz JC, Wu X, Peng B, Shi Y, Song Y, Zhang D, Buckler ES, Zhang Z, Li Y, et al. Identification of genetic variants associated with maize flowering time using an extremely large multi-genetic background population. The Plant Journal : For Cell and Molecular Biology. PMID 27012534 DOI: 10.1111/Tpj.13174 |
0.547 |
|
| 2016 |
Weigel D, Bergelson J, Buckler ES, Ecker JR, Nordborg M. A proposal regarding best practices for validating the identity of genetic stocks and the effects of genetic variants. The Plant Cell. PMID 26956491 DOI: 10.1105/Tpc.15.00502 |
0.322 |
|
| 2016 |
Liu X, Huang M, Fan B, Buckler ES, Zhang Z. Iterative Usage of Fixed and Random Effect Models for Powerful and Efficient Genome-Wide Association Studies. Plos Genetics. 12: e1005767. PMID 26828793 DOI: 10.1371/Journal.Pgen.1005767 |
0.406 |
|
| 2016 |
Wu X, Li Y, Shi Y, Song Y, Zhang D, Li C, Buckler ES, Li Y, Zhang Z, Wang T. Joint-linkage mapping and GWAS reveal extensive genetic loci that regulate male inflorescence size in maize. Plant Biotechnology Journal. PMID 26801971 DOI: 10.1111/Pbi.12519 |
0.469 |
|
| 2016 |
Tang Y, Liu X, Wang J, Li M, Wang Q, Tian F, Su Z, Pan Y, Liu D, Lipka AE, Buckler ES, Zhang Z. GAPIT version 2: An enhanced integrated tool for genomic association and prediction Plant Genome. 9. DOI: 10.3835/plantgenome2015.11.0120 |
0.337 |
|
| 2016 |
Punnuri SM, Wallace JG, Knoll JE, Hyma KE, Mitchell SE, Buckler ES, Varshney RK, Singh BP. Development of a high-density linkage map and tagging leaf spot resistance in pearl millet using genotyping-by-sequencing markers Plant Genome. 9. DOI: 10.3835/plantgenome2015.10.0106 |
0.382 |
|
| 2016 |
Wallace JG, Zhang X, Beyene Y, Semagn K, Olsen M, Prasanna BM, Buckler ES. Genome-wide association for plant height and flowering time across 15 tropical maize populations under managed drought stress and well-watered conditions in Sub-Saharan Africa Crop Science. 56: 2365-2378. DOI: 10.2135/Cropsci2015.10.0632 |
0.562 |
|
| 2016 |
Esuma W, Herselman L, Labuschagne MT, Ramu P, Lu F, Baguma Y, Buckler ES, Kawuki RS. Genome-wide association mapping of provitamin A carotenoid content in cassava Euphytica. 212: 97-110. DOI: 10.1007/S10681-016-1772-5 |
0.557 |
|
| 2015 |
Wallace JG, Upadhyaya HD, Vetriventhan M, Buckler ES, Tom Hash C, Ramu P. The Genetic Makeup of a Global Barnyard Millet Germplasm Collection. The Plant Genome. 8: eplantgenome2014.10.. PMID 33228281 DOI: 10.3835/plantgenome2014.10.0067 |
0.359 |
|
| 2015 |
Upadhyaya HD, Vetriventhan M, Deshpande SP, Sivasubramani S, Wallace JG, Buckler ES, Hash CT, Ramu P. Population Genetics and Structure of a Global Foxtail Millet Germplasm Collection. The Plant Genome. 8: eplantgenome2015.07.. PMID 33228275 DOI: 10.3835/plantgenome2015.07.0054 |
0.49 |
|
| 2015 |
Lasky JR, Upadhyaya HD, Ramu P, Deshpande S, Hash CT, Bonnette J, Juenger TE, Hyma K, Acharya C, Mitchell SE, Buckler ES, Brenton Z, Kresovich S, Morris GP. Genome-environment associations in sorghum landraces predict adaptive traits. Science Advances. 1: e1400218. PMID 26601206 DOI: 10.1126/Sciadv.1400218 |
0.507 |
|
| 2015 |
Li C, Li Y, Bradbury PJ, Wu X, Shi Y, Song Y, Zhang D, Rodgers-Melnick E, Buckler ES, Zhang Z, Li Y, Wang T. Construction of high-quality recombination maps with low-coverage genomic sequencing for joint linkage analysis in maize. Bmc Biology. 13: 78. PMID 26390990 DOI: 10.1186/S12915-015-0187-4 |
0.507 |
|
| 2015 |
Takuno S, Ralph P, Swarts K, Elshire RJ, Glaubitz JC, Buckler ES, Hufford MB, Ross-Ibarra J. Independent Molecular Basis of Convergent Highland Adaptation in Maize. Genetics. PMID 26078279 DOI: 10.1534/Genetics.115.178327 |
0.484 |
|
| 2015 |
Zhang N, Gibon Y, Wallace JG, Lepak N, Li P, Dedow L, Chen C, So YS, Kremling K, Bradbury PJ, Brutnell T, Stitt M, Buckler ES. Genome-wide association of carbon and nitrogen metabolism in the maize nested association mapping population. Plant Physiology. 168: 575-83. PMID 25918116 DOI: 10.1104/Pp.15.00025 |
0.451 |
|
| 2015 |
Lu F, Romay MC, Glaubitz JC, Bradbury PJ, Elshire RJ, Wang T, Li Y, Li Y, Semagn K, Zhang X, Hernandez AG, Mikel MA, Soifer I, Barad O, Buckler ES. High-resolution genetic mapping of maize pan-genome sequence anchors. Nature Communications. 6: 6914. PMID 25881062 DOI: 10.1038/Ncomms7914 |
0.552 |
|
| 2015 |
Li C, Li Y, Shi Y, Song Y, Zhang D, Buckler ES, Zhang Z, Wang T, Li Y. Genetic control of the leaf angle and leaf orientation value as revealed by ultra-high density maps in three connected maize populations. Plos One. 10: e0121624. PMID 25807369 DOI: 10.1371/Journal.Pone.0121624 |
0.576 |
|
| 2015 |
Rodgers-Melnick E, Bradbury PJ, Elshire RJ, Glaubitz JC, Acharya CB, Mitchell SE, Li C, Li Y, Buckler ES. Recombination in diverse maize is stable, predictable, and associated with genetic load. Proceedings of the National Academy of Sciences of the United States of America. 112: 3823-8. PMID 25775595 DOI: 10.1073/Pnas.1413864112 |
0.545 |
|
| 2015 |
Ramstein GP, Lipka AE, Lu F, Costich DE, Cherney JH, Buckler ES, Casler MD. Genome-wide association study based on multiple imputation with low-depth sequencing data: application to biofuel traits in reed canarygrass. G3 (Bethesda, Md.). 5: 891-909. PMID 25770100 DOI: 10.1534/G3.115.017533 |
0.568 |
|
| 2015 |
Zhang X, Pérez-Rodríguez P, Semagn K, Beyene Y, Babu R, López-Cruz MA, San Vicente F, Olsen M, Buckler E, Jannink JL, Prasanna BM, Crossa J. Genomic prediction in biparental tropical maize populations in water-stressed and well-watered environments using low-density and GBS SNPs. Heredity. 114: 291-9. PMID 25407079 DOI: 10.1038/Hdy.2014.99 |
0.485 |
|
| 2015 |
Yan J, Lipka AE, Schmelz EA, Buckler ES, Jander G. Accumulation of 5-hydroxynorvaline in maize (Zea mays) leaves is induced by insect feeding and abiotic stress. Journal of Experimental Botany. 66: 593-602. PMID 25271262 DOI: 10.1093/Jxb/Eru385 |
0.389 |
|
| 2015 |
Upadhyaya HD, Vetriventhan M, Deshpande SP, Sivasubramani S, Wallace JG, Buckler ES, Hash CT, Ramu P. Population genetics and structure of a global foxtail millet germplasm collection Plant Genome. 8. DOI: 10.3835/Plantgenome2015.07.0054 |
0.574 |
|
| 2015 |
Wallace JG, Upadhyaya HD, Vetriventhan M, Buckler ES, Hash CT, Ramu P. The genetic makeup of a global barnyard millet germplasm collection Plant Genome. 8. DOI: 10.3835/Plantgenome2014.10.0067 |
0.464 |
|
| 2015 |
Myles S, Mahanil S, Harriman J, Gardner KM, Franklin JL, Reisch BI, Ramming DW, Owens CL, Li L, Buckler ES, Cadle-Davidson L. Genetic mapping in grapevine using SNP microarray intensity values Molecular Breeding. 35. DOI: 10.1007/S11032-015-0288-3 |
0.513 |
|
| 2014 |
Zila CT, Ogut F, Romay MC, Gardner CA, Buckler ES, Holland JB. Genome-wide association study of Fusarium ear rot disease in the U.S.A. maize inbred line collection. Bmc Plant Biology. 14: 372. PMID 25547028 DOI: 10.1186/S12870-014-0372-6 |
0.451 |
|
| 2014 |
Wallace JG, Bradbury PJ, Zhang N, Gibon Y, Stitt M, Buckler ES. Association mapping across numerous traits reveals patterns of functional variation in maize. Plos Genetics. 10: e1004845. PMID 25474422 DOI: 10.1371/Journal.Pgen.1004845 |
0.583 |
|
| 2014 |
Lipka AE, Lu F, Cherney JH, Buckler ES, Casler MD, Costich DE. Accelerating the switchgrass (Panicum virgatum L.) breeding cycle using genomic selection approaches. Plos One. 9: e112227. PMID 25390940 DOI: 10.1371/Journal.Pone.0112227 |
0.509 |
|
| 2014 |
Li M, Liu X, Bradbury P, Yu J, Zhang YM, Todhunter RJ, Buckler ES, Zhang Z. Enrichment of statistical power for genome-wide association studies. Bmc Biology. 12: 73. PMID 25322753 DOI: 10.1186/S12915-014-0073-5 |
0.405 |
|
| 2014 |
Owens BF, Lipka AE, Magallanes-Lundback M, Tiede T, Diepenbrock CH, Kandianis CB, Kim E, Cepela J, Mateos-Hernandez M, Buell CR, Buckler ES, DellaPenna D, Gore MA, Rocheford T. A foundation for provitamin A biofortification of maize: genome-wide association and genomic prediction models of carotenoid levels. Genetics. 198: 1699-716. PMID 25258377 DOI: 10.1534/Genetics.114.169979 |
0.794 |
|
| 2014 |
Wang Q, Tian F, Pan Y, Buckler ES, Zhang Z. A SUPER powerful method for genome wide association study. Plos One. 9: e107684. PMID 25247812 DOI: 10.1371/Journal.Pone.0107684 |
0.414 |
|
| 2014 |
Hirsch CN, Flint-Garcia SA, Beissinger TM, Eichten SR, Deshpande S, Barry K, McMullen MD, Holland JB, Buckler ES, Springer N, Buell CR, de Leon N, Kaeppler SM. Insights into the effects of long-term artificial selection on seed size in maize. Genetics. 198: 409-21. PMID 25037958 DOI: 10.1534/Genetics.114.167155 |
0.523 |
|
| 2014 |
Glaubitz JC, Casstevens TM, Lu F, Harriman J, Elshire RJ, Sun Q, Buckler ES. TASSEL-GBS: a high capacity genotyping by sequencing analysis pipeline. Plos One. 9: e90346. PMID 24587335 DOI: 10.1371/Journal.Pone.0090346 |
0.485 |
|
| 2014 |
Peiffer JA, Romay MC, Gore MA, Flint-Garcia SA, Zhang Z, Millard MJ, Gardner CA, McMullen MD, Holland JB, Bradbury PJ, Buckler ES. The genetic architecture of maize height. Genetics. 196: 1337-56. PMID 24514905 DOI: 10.1534/Genetics.113.159152 |
0.723 |
|
| 2014 |
Chitwood DH, Ranjan A, Martinez CC, Headland LR, Thiem T, Kumar R, Covington MF, Hatcher T, Naylor DT, Zimmerman S, Downs N, Raymundo N, Buckler ES, Maloof JN, Aradhya M, et al. A modern ampelography: a genetic basis for leaf shape and venation patterning in grape. Plant Physiology. 164: 259-72. PMID 24285849 DOI: 10.1104/Pp.113.229708 |
0.493 |
|
| 2014 |
Wallace JG, Larsson SJ, Buckler ES. Entering the second century of maize quantitative genetics. Heredity. 112: 30-8. PMID 23462502 DOI: 10.1038/Hdy.2013.6 |
0.79 |
|
| 2014 |
Swarts K, Li H, Romero Navarro JA, An D, Romay MC, Hearne S, Acharya C, Glaubitz JC, Mitchell S, Elshire RJ, Buckler ES, Bradbury PJ. Novel Methods to Optimize Genotypic Imputation for Low-Coverage, Next-Generation Sequence Data in Crop Plants The Plant Genome. 7: plantgenome2014.05.0. DOI: 10.3835/Plantgenome2014.05.0023 |
0.442 |
|
| 2014 |
Miller AJ, Matasci N, Schwaninger H, Aradhya MK, Prins B, Zhong G, Simon C, Buckler ES, Myles S. Correction: Vitis Phylogenomics: Hybridization Intensities from a SNP Array Outperform Genotype Calls Plos One. 9. DOI: 10.1371/Annotation/283E5Eba-A65D-42A3-A430-6Ca0Be86147C |
0.306 |
|
| 2013 |
Sawler J, Reisch B, Aradhya MK, Prins B, Zhong GY, Schwaninger H, Simon C, Buckler E, Myles S. Genomics assisted ancestry deconvolution in grape. Plos One. 8: e80791. PMID 24244717 DOI: 10.1371/Journal.Pone.0080791 |
0.482 |
|
| 2013 |
Miller AJ, Matasci N, Schwaninger H, Aradhya MK, Prins B, Zhong GY, Simon C, Buckler ES, Myles S. Vitis phylogenomics: hybridization intensities from a SNP array outperform genotype calls. Plos One. 8: e78680. PMID 24236035 DOI: 10.1371/Journal.Pone.0078680 |
0.411 |
|
| 2013 |
Morris GP, Rhodes DH, Brenton Z, Ramu P, Thayil VM, Deshpande S, Hash CT, Acharya C, Mitchell SE, Buckler ES, Yu J, Kresovich S. Dissecting genome-wide association signals for loss-of-function phenotypes in sorghum flavonoid pigmentation traits. G3 (Bethesda, Md.). 3: 2085-94. PMID 24048646 DOI: 10.1534/G3.113.008417 |
0.559 |
|
| 2013 |
Crossa J, Beyene Y, Kassa S, Pérez P, Hickey JM, Chen C, de los Campos G, Burgueño J, Windhausen VS, Buckler E, Jannink JL, Lopez Cruz MA, Babu R. Genomic prediction in maize breeding populations with genotyping-by-sequencing. G3 (Bethesda, Md.). 3: 1903-26. PMID 24022750 DOI: 10.1534/G3.113.008227 |
0.464 |
|
| 2013 |
Meihls LN, Handrick V, Glauser G, Barbier H, Kaur H, Haribal MM, Lipka AE, Gershenzon J, Buckler ES, Erb M, Köllner TG, Jander G. Natural variation in maize aphid resistance is associated with 2,4-dihydroxy-7-methoxy-1,4-benzoxazin-3-one glucoside methyltransferase activity. The Plant Cell. 25: 2341-55. PMID 23898034 DOI: 10.1105/Tpc.113.112409 |
0.454 |
|
| 2013 |
Peiffer JA, Flint-Garcia SA, De Leon N, McMullen MD, Kaeppler SM, Buckler ES. The genetic architecture of maize stalk strength. Plos One. 8: e67066. PMID 23840585 DOI: 10.1371/Journal.Pone.0067066 |
0.531 |
|
| 2013 |
McCouch S, Baute GJ, Bradeen J, Bramel P, Bretting PK, Buckler E, Burke JM, Charest D, Cloutier S, Cole G, Dempewolf H, Dingkuhn M, Feuillet C, Gepts P, Grattapaglia D, et al. Agriculture: Feeding the future. Nature. 499: 23-4. PMID 23823779 DOI: 10.1038/499023A |
0.719 |
|
| 2013 |
Romay MC, Millard MJ, Glaubitz JC, Peiffer JA, Swarts KL, Casstevens TM, Elshire RJ, Acharya CB, Mitchell SE, Flint-Garcia SA, McMullen MD, Holland JB, Buckler ES, Gardner CA. Comprehensive genotyping of the USA national maize inbred seed bank. Genome Biology. 14: R55. PMID 23759205 DOI: 10.1186/Gb-2013-14-6-R55 |
0.397 |
|
| 2013 |
Lipka AE, Gore MA, Magallanes-Lundback M, Mesberg A, Lin H, Tiede T, Chen C, Buell CR, Buckler ES, Rocheford T, DellaPenna D. Genome-wide association study and pathway-level analysis of tocochromanol levels in maize grain. G3 (Bethesda, Md.). 3: 1287-99. PMID 23733887 DOI: 10.1534/G3.113.006148 |
0.79 |
|
| 2013 |
Peiffer JA, Spor A, Koren O, Jin Z, Tringe SG, Dangl JL, Buckler ES, Ley RE. Diversity and heritability of the maize rhizosphere microbiome under field conditions. Proceedings of the National Academy of Sciences of the United States of America. 110: 6548-53. PMID 23576752 DOI: 10.1073/Pnas.1302837110 |
0.453 |
|
| 2013 |
Maron LG, Guimarães CT, Kirst M, Albert PS, Birchler JA, Bradbury PJ, Buckler ES, Coluccio AE, Danilova TV, Kudrna D, Magalhaes JV, Piñeros MA, Schatz MC, Wing RA, Kochian LV. Aluminum tolerance in maize is associated with higher MATE1 gene copy number. Proceedings of the National Academy of Sciences of the United States of America. 110: 5241-6. PMID 23479633 DOI: 10.1073/Pnas.1220766110 |
0.643 |
|
| 2013 |
Larsson SJ, Lipka AE, Buckler ES. Lessons from Dwarf8 on the strengths and weaknesses of structured association mapping. Plos Genetics. 9: e1003246. PMID 23437002 DOI: 10.1371/Journal.Pgen.1003246 |
0.726 |
|
| 2013 |
Lu F, Lipka AE, Glaubitz J, Elshire R, Cherney JH, Casler MD, Buckler ES, Costich DE. Switchgrass genomic diversity, ploidy, and evolution: novel insights from a network-based SNP discovery protocol. Plos Genetics. 9: e1003215. PMID 23349638 DOI: 10.1371/Journal.Pgen.1003215 |
0.532 |
|
| 2013 |
Morris GP, Ramu P, Deshpande SP, Hash CT, Shah T, Upadhyaya HD, Riera-Lizarazu O, Brown PJ, Acharya CB, Mitchell SE, Harriman J, Glaubitz JC, Buckler ES, Kresovich S. Population genomic and genome-wide association studies of agroclimatic traits in sorghum. Proceedings of the National Academy of Sciences of the United States of America. 110: 453-8. PMID 23267105 DOI: 10.1073/Pnas.1215985110 |
0.593 |
|
| 2013 |
Chandler K, Lipka AE, Owens BF, Li H, Buckler ES, Rocheford T, Gore MA. Genetic analysis of visually scored orange kernel color in maize Crop Science. 53: 189-200. DOI: 10.2135/Cropsci2012.02.0129 |
0.654 |
|
| 2013 |
Chen C, Mitchell SE, Elshire RJ, Buckler ES, El-Kassaby YA. Mining conifers' mega-genome using rapid and efficient multiplexed high-throughput genotyping-by-sequencing (GBS) SNP discovery platform Tree Genetics and Genomes. 9: 1537-1544. DOI: 10.1007/S11295-013-0657-1 |
0.471 |
|
| 2012 |
Varshney RK, Ribaut JM, Buckler ES, Tuberosa R, Rafalski JA, Langridge P. Can genomics boost productivity of orphan crops? Nature Biotechnology. 30: 1172-6. PMID 23222781 DOI: 10.1038/Nbt.2440 |
0.496 |
|
| 2012 |
Chen C, DeClerck G, Tian F, Spooner W, McCouch S, Buckler E. PICARA, an analytical pipeline providing probabilistic inference about a priori candidates genes underlying genome-wide association QTL in plants. Plos One. 7: e46596. PMID 23144785 DOI: 10.1371/Journal.Pone.0046596 |
0.517 |
|
| 2012 |
Ersoz ES, Wright MH, Pangilinan JL, Sheehan MJ, Tobias C, Casler MD, Buckler ES, Costich DE. SNP discovery with EST and NextGen sequencing in switchgrass (Panicum virgatum L.). Plos One. 7: e44112. PMID 23049744 DOI: 10.1371/Journal.Pone.0044112 |
0.528 |
|
| 2012 |
Lipka AE, Tian F, Wang Q, Peiffer J, Li M, Bradbury PJ, Gore MA, Buckler ES, Zhang Z. GAPIT: genome association and prediction integrated tool. Bioinformatics (Oxford, England). 28: 2397-9. PMID 22796960 DOI: 10.1093/Bioinformatics/Bts444 |
0.663 |
|
| 2012 |
Hung HY, Shannon LM, Tian F, Bradbury PJ, Chen C, Flint-Garcia SA, McMullen MD, Ware D, Buckler ES, Doebley JF, Holland JB. ZmCCT and the genetic basis of day-length adaptation underlying the postdomestication spread of maize. Proceedings of the National Academy of Sciences of the United States of America. 109: E1913-21. PMID 22711828 DOI: 10.1073/Pnas.1203189109 |
0.481 |
|
| 2012 |
Li X, Zhu C, Yeh CT, Wu W, Takacs EM, Petsch KA, Tian F, Bai G, Buckler ES, Muehlbauer GJ, Timmermans MC, Scanlon MJ, Schnable PS, Yu J. Genic and nongenic contributions to natural variation of quantitative traits in maize. Genome Research. 22: 2436-44. PMID 22701078 DOI: 10.1101/Gr.140277.112 |
0.58 |
|
| 2012 |
Hufford MB, Xu X, van Heerwaarden J, Pyhäjärvi T, Chia JM, Cartwright RA, Elshire RJ, Glaubitz JC, Guill KE, Kaeppler SM, Lai J, Morrell PL, Shannon LM, Song C, Springer NM, ... ... Buckler ES, et al. Comparative population genomics of maize domestication and improvement. Nature Genetics. 44: 808-11. PMID 22660546 DOI: 10.1038/Ng.2309 |
0.507 |
|
| 2012 |
Chia JM, Song C, Bradbury PJ, Costich D, de Leon N, Doebley J, Elshire RJ, Gaut B, Geller L, Glaubitz JC, Gore M, Guill KE, Holland J, Hufford MB, Lai J, ... ... Buckler ES, et al. Maize HapMap2 identifies extant variation from a genome in flux. Nature Genetics. 44: 803-7. PMID 22660545 DOI: 10.1038/Ng.2313 |
0.736 |
|
| 2012 |
Cook JP, McMullen MD, Holland JB, Tian F, Bradbury P, Ross-Ibarra J, Buckler ES, Flint-Garcia SA. Genetic architecture of maize kernel composition in the nested association mapping and inbred association panels. Plant Physiology. 158: 824-34. PMID 22135431 DOI: 10.1104/Pp.111.185033 |
0.456 |
|
| 2012 |
Hung HY, Browne C, Guill K, Coles N, Eller M, Garcia A, Lepak N, Melia-Hancock S, Oropeza-Rosas M, Salvo S, Upadyayula N, Buckler ES, Flint-Garcia S, McMullen MD, Rocheford TR, et al. The relationship between parental genetic or phenotypic divergence and progeny variation in the maize nested association mapping population. Heredity. 108: 490-9. PMID 22027895 DOI: 10.1038/Hdy.2011.103 |
0.461 |
|
| 2011 |
Morrell PL, Buckler ES, Ross-Ibarra J. Crop genomics: advances and applications. Nature Reviews. Genetics. 13: 85-96. PMID 22207165 DOI: 10.1038/Nrg3097 |
0.513 |
|
| 2011 |
Ganal MW, Durstewitz G, Polley A, Bérard A, Buckler ES, Charcosset A, Clarke JD, Graner EM, Hansen M, Joets J, Le Paslier MC, McMullen MD, Montalent P, Rose M, Schön CC, et al. A large maize (Zea mays L.) SNP genotyping array: development and germplasm genotyping, and genetic mapping to compare with the B73 reference genome. Plos One. 6: e28334. PMID 22174790 DOI: 10.1371/Journal.Pone.0028334 |
0.529 |
|
| 2011 |
Brown PJ, Upadyayula N, Mahone GS, Tian F, Bradbury PJ, Myles S, Holland JB, Flint-Garcia S, McMullen MD, Buckler ES, Rocheford TR. Distinct genetic architectures for male and female inflorescence traits of maize. Plos Genetics. 7: e1002383. PMID 22125498 DOI: 10.1371/Journal.Pgen.1002383 |
0.539 |
|
| 2011 |
Elshire RJ, Glaubitz JC, Sun Q, Poland JA, Kawamoto K, Buckler ES, Mitchell SE. A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species. Plos One. 6: e19379. PMID 21573248 DOI: 10.1371/Journal.Pone.0019379 |
0.481 |
|
| 2011 |
Poland JA, Bradbury PJ, Buckler ES, Nelson RJ. Genome-wide nested association mapping of quantitative resistance to northern leaf blight in maize. Proceedings of the National Academy of Sciences of the United States of America. 108: 6893-8. PMID 21482771 DOI: 10.1073/Pnas.1010894108 |
0.479 |
|
| 2011 |
Li H, Bradbury P, Ersoz E, Buckler ES, Wang J. Joint QTL linkage mapping for multiple-cross mating design sharing one common parent. Plos One. 6: e17573. PMID 21423655 DOI: 10.1371/Journal.Pone.0017573 |
0.385 |
|
| 2011 |
Myles S, Boyko AR, Owens CL, Brown PJ, Grassi F, Aradhya MK, Prins B, Reynolds A, Chia JM, Ware D, Bustamante CD, Buckler ES. Genetic structure and domestication history of the grape. Proceedings of the National Academy of Sciences of the United States of America. 108: 3530-5. PMID 21245334 DOI: 10.1073/Pnas.1009363108 |
0.498 |
|
| 2011 |
Hamblin MT, Buckler ES, Jannink JL. Population genetics of genomics-based crop improvement methods. Trends in Genetics : Tig. 27: 98-106. PMID 21227531 DOI: 10.1016/J.Tig.2010.12.003 |
0.575 |
|
| 2011 |
Kump KL, Bradbury PJ, Wisser RJ, Buckler ES, Belcher AR, Oropeza-Rosas MA, Zwonitzer JC, Kresovich S, McMullen MD, Ware D, Balint-Kurti PJ, Holland JB. Genome-wide association study of quantitative resistance to southern leaf blight in the maize nested association mapping population. Nature Genetics. 43: 163-8. PMID 21217757 DOI: 10.1038/Ng.747 |
0.511 |
|
| 2011 |
Tian F, Bradbury PJ, Brown PJ, Hung H, Sun Q, Flint-Garcia S, Rocheford TR, McMullen MD, Holland JB, Buckler ES. Genome-wide association study of leaf architecture in the maize nested association mapping population. Nature Genetics. 43: 159-62. PMID 21217756 DOI: 10.1038/Ng.746 |
0.58 |
|
| 2011 |
Setter TL, Yan J, Warburton M, Ribaut JM, Xu Y, Sawkins M, Buckler ES, Zhang Z, Gore MA. Genetic association mapping identifies single nucleotide polymorphisms in genes that affect abscisic acid levels in maize floral tissues during drought. Journal of Experimental Botany. 62: 701-16. PMID 21084430 DOI: 10.1093/Jxb/Erq308 |
0.657 |
|
| 2011 |
Youens-Clark K, Buckler E, Casstevens T, Chen C, Declerck G, Derwent P, Dharmawardhana P, Jaiswal P, Kersey P, Karthikeyan AS, Lu J, McCouch SR, Ren L, Spooner W, Stein JC, et al. Gramene database in 2010: updates and extensions. Nucleic Acids Research. 39: D1085-94. PMID 21076153 DOI: 10.1093/Nar/Gkq1148 |
0.516 |
|
| 2010 |
Huang X, Wei X, Sang T, Zhao Q, Feng Q, Zhao Y, Li C, Zhu C, Lu T, Zhang Z, Li M, Fan D, Guo Y, Wang A, Wang L, ... ... Buckler ES, et al. Genome-wide association studies of 14 agronomic traits in rice landraces. Nature Genetics. 42: 961-7. PMID 20972439 DOI: 10.1038/Ng.695 |
0.59 |
|
| 2010 |
Zhang N, Gibon Y, Gur A, Chen C, Lepak N, Höhne M, Zhang Z, Kroon D, Tschoep H, Stitt M, Buckler E. Fine quantitative trait loci mapping of carbon and nitrogen metabolism enzyme activities and seedling biomass in the maize IBM mapping population. Plant Physiology. 154: 1753-65. PMID 20971858 DOI: 10.1104/Pp.110.165787 |
0.431 |
|
| 2010 |
Krill AM, Kirst M, Kochian LV, Buckler ES, Hoekenga OA. Association and linkage analysis of aluminum tolerance genes in maize. Plos One. 5: e9958. PMID 20376361 DOI: 10.1371/Journal.Pone.0009958 |
0.303 |
|
| 2010 |
Zhang N, Gur A, Gibon Y, Sulpice R, Flint-Garcia S, McMullen MD, Stitt M, Buckler ES. Genetic analysis of central carbon metabolism unveils an amino acid substitution that alters maize NAD-dependent isocitrate dehydrogenase activity. Plos One. 5: e9991. PMID 20376324 DOI: 10.1371/Journal.Pone.0009991 |
0.407 |
|
| 2010 |
Yan J, Kandianis CB, Harjes CE, Bai L, Kim EH, Yang X, Skinner DJ, Fu Z, Mitchell S, Li Q, Fernandez MG, Zaharieva M, Babu R, Fu Y, Palacios N, ... ... Buckler ES, et al. Rare genetic variation at Zea mays crtRB1 increases beta-carotene in maize grain. Nature Genetics. 42: 322-7. PMID 20305664 DOI: 10.1038/Ng.551 |
0.656 |
|
| 2010 |
Zhang Z, Ersoz E, Lai CQ, Todhunter RJ, Tiwari HK, Gore MA, Bradbury PJ, Yu J, Arnett DK, Ordovas JM, Buckler ES. Mixed linear model approach adapted for genome-wide association studies. Nature Genetics. 42: 355-60. PMID 20208535 DOI: 10.1038/Ng.546 |
0.67 |
|
| 2010 |
Myles S, Chia JM, Hurwitz B, Simon C, Zhong GY, Buckler E, Ware D. Rapid genomic characterization of the genus vitis. Plos One. 5: e8219. PMID 20084295 DOI: 10.1371/Journal.Pone.0008219 |
0.545 |
|
| 2010 |
Costich DE, Friebe B, Sheehan MJ, Casler MD, Buckler ES. Genome-size Variation in Switchgrass (Panicum virgatum
): Flow Cytometry and Cytology Reveal Rampant Aneuploidy The Plant Genome. 3: 130-141. DOI: 10.3835/Plantgenome2010.04.0010 |
0.48 |
|
| 2010 |
Chen C, DeClerck G, Casstevens T, Youens-Clark K, Zhang J, Ware D, Jaiswal P, McCouch S, Buckler E. The Gramene Genetic Diversity Module: a resource for genotype-phenotype association analysis in grass species Nature Precedings. DOI: 10.1038/Npre.2010.4645.1 |
0.443 |
|
| 2009 |
Yan J, Shah T, Warburton ML, Buckler ES, McMullen MD, Crouch J. Genetic characterization and linkage disequilibrium estimation of a global maize collection using SNP markers. Plos One. 4: e8451. PMID 20041112 DOI: 10.1371/Journal.Pone.0008451 |
0.467 |
|
| 2009 |
Gore MA, Chia JM, Elshire RJ, Sun Q, Ersoz ES, Hurwitz BL, Peiffer JA, McMullen MD, Grills GS, Ross-Ibarra J, Ware DH, Buckler ES. A first-generation haplotype map of maize. Science (New York, N.Y.). 326: 1115-7. PMID 19965431 DOI: 10.1126/Science.1177837 |
0.749 |
|
| 2009 |
Zhang Z, Buckler ES, Casstevens TM, Bradbury PJ. Software engineering the mixed model for genome-wide association studies on large samples. Briefings in Bioinformatics. 10: 664-75. PMID 19933212 DOI: 10.1093/Bib/Bbp050 |
0.397 |
|
| 2009 |
Flint-Garcia SA, Buckler ES, Tiffin P, Ersoz E, Springer NM. Heterosis is prevalent for multiple traits in diverse maize germplasm. Plos One. 4: e7433. PMID 19823591 DOI: 10.1371/Journal.Pone.0007433 |
0.477 |
|
| 2009 |
McMullen MD, Kresovich S, Villeda HS, Bradbury P, Li H, Sun Q, Flint-Garcia S, Thornsberry J, Acharya C, Bottoms C, Brown P, Browne C, Eller M, Guill K, Harjes C, ... ... Buckler ES, et al. Genetic properties of the maize nested association mapping population. Science (New York, N.Y.). 325: 737-40. PMID 19661427 DOI: 10.1126/Science.1174320 |
0.717 |
|
| 2009 |
Buckler ES, Holland JB, Bradbury PJ, Acharya CB, Brown PJ, Browne C, Ersoz E, Flint-Garcia S, Garcia A, Glaubitz JC, Goodman MM, Harjes C, Guill K, Kroon DE, Larsson S, et al. The genetic architecture of maize flowering time. Science (New York, N.Y.). 325: 714-8. PMID 19661422 DOI: 10.1126/Science.1174276 |
0.82 |
|
| 2009 |
Myles S, Peiffer J, Brown PJ, Ersoz ES, Zhang Z, Costich DE, Buckler ES. Association mapping: critical considerations shift from genotyping to experimental design. The Plant Cell. 21: 2194-202. PMID 19654263 DOI: 10.1105/Tpc.109.068437 |
0.421 |
|
| 2009 |
Tian F, Stevens NM, Buckler ES. Tracking footprints of maize domestication and evidence for a massive selective sweep on chromosome 10. Proceedings of the National Academy of Sciences of the United States of America. 106: 9979-86. PMID 19528660 DOI: 10.1073/Pnas.0901122106 |
0.508 |
|
| 2009 |
Bernardo AN, Bradbury PJ, Ma H, Hu S, Bowden RL, Buckler ES, Bai G. Discovery and mapping of single feature polymorphisms in wheat using Affymetrix arrays. Bmc Genomics. 10: 251. PMID 19480702 DOI: 10.1186/1471-2164-10-251 |
0.38 |
|
| 2009 |
Pressoir G, Brown PJ, Zhu W, Upadyayula N, Rocheford T, Buckler ES, Kresovich S. Natural variation in maize architecture is mediated by allelic differences at the PINOID co-ortholog barren inflorescence2. The Plant Journal : For Cell and Molecular Biology. 58: 618-28. PMID 19154226 DOI: 10.1111/J.1365-313X.2009.03802.X |
0.374 |
|
| 2009 |
Gore MA, Wright MH, Ersoz ES, Bouffard P, Szekeres ES, Jarvie TP, Hurwitz BL, Narechania A, Harkins TT, Grills GS, Ware DH, Buckler ES. Large-Scale Discovery of Gene-Enriched SNPs The Plant Genome. 2: 121-133. DOI: 10.3835/Plantgenome2009.01.0002 |
0.694 |
|
| 2009 |
Yu J, Zhang Z, Zhu C, Tabanao DA, Pressoir G, Tuinstra MR, Kresovich S, Todhunter RJ, Buckler ES. Simulation Appraisal of the Adequacy of Number of Background Markers for Relationship Estimation in Association Mapping The Plant Genome. 2: 63-77. DOI: 10.3835/Plantgenome2008.09.0009 |
0.468 |
|
| 2008 |
Weber AL, Briggs WH, Rucker J, Baltazar BM, de Jesús Sánchez-Gonzalez J, Feng P, Buckler ES, Doebley J. The genetic architecture of complex traits in teosinte (Zea mays ssp. parviglumis): new evidence from association mapping. Genetics. 180: 1221-32. PMID 18791250 DOI: 10.1534/Genetics.108.090134 |
0.505 |
|
| 2008 |
Stich B, Möhring J, Piepho HP, Heckenberger M, Buckler ES, Melchinger AE. Comparison of mixed-model approaches for association mapping. Genetics. 178: 1745-54. PMID 18245847 DOI: 10.1534/Genetics.107.079707 |
0.37 |
|
| 2008 |
Yu J, Holland JB, McMullen MD, Buckler ES. Genetic design and statistical power of nested association mapping in maize. Genetics. 178: 539-51. PMID 18202393 DOI: 10.1534/Genetics.107.074245 |
0.512 |
|
| 2008 |
Harjes CE, Rocheford TR, Bai L, Brutnell TP, Kandianis CB, Sowinski SG, Stapleton AE, Vallabhaneni R, Williams M, Wurtzel ET, Yan J, Buckler ES. Natural genetic variation in lycopene epsilon cyclase tapped for maize biofortification. Science (New York, N.Y.). 319: 330-3. PMID 18202289 DOI: 10.1126/Science.1150255 |
0.373 |
|
| 2008 |
Canaran P, Buckler ES, Glaubitz JC, Stein L, Sun Q, Zhao W, Ware D. Panzea: an update on new content and features. Nucleic Acids Research. 36: D1041-3. PMID 18029361 DOI: 10.1093/Nar/Gkm1022 |
0.434 |
|
| 2008 |
Liang C, Jaiswal P, Hebbard C, Avraham S, Buckler ES, Casstevens T, Hurwitz B, McCouch S, Ni J, Pujar A, Ravenscroft D, Ren L, Spooner W, Tecle I, Thomason J, et al. Gramene: a growing plant comparative genomics resource. Nucleic Acids Research. 36: D947-53. PMID 17984077 DOI: 10.1093/Nar/Gkm968 |
0.558 |
|
| 2008 |
Zhu C, Gore M, Buckler ES, Yu J. Status and Prospects of Association Mapping in Plants The Plant Genome. 1: 5-20. DOI: 10.3835/Plantgenome2008.02.0089 |
0.713 |
|
| 2007 |
Hamblin MT, Warburton ML, Buckler ES. Empirical comparison of Simple Sequence Repeats and single nucleotide polymorphisms in assessment of maize diversity and relatedness. Plos One. 2: e1367. PMID 18159250 DOI: 10.1371/Journal.Pone.0001367 |
0.465 |
|
| 2007 |
Esch E, Szymaniak JM, Yates H, Pawlowski WP, Buckler ES. Using crossover breakpoints in recombinant inbred lines to identify quantitative trait loci controlling the global recombination frequency. Genetics. 177: 1851-8. PMID 17947409 DOI: 10.1534/Genetics.107.080622 |
0.479 |
|
| 2007 |
Buckler E, Gore M. An Arabidopsis haplotype map takes root. Nature Genetics. 39: 1056-7. PMID 17728772 DOI: 10.1038/Ng0907-1056 |
0.686 |
|
| 2007 |
Bradbury PJ, Zhang Z, Kroon DE, Casstevens TM, Ramdoss Y, Buckler ES. TASSEL: software for association mapping of complex traits in diverse samples. Bioinformatics (Oxford, England). 23: 2633-5. PMID 17586829 DOI: 10.1093/Bioinformatics/Btm308 |
0.454 |
|
| 2007 |
Stich B, Yu J, Melchinger AE, Piepho HP, Utz HF, Maurer HP, Buckler ES. Power to detect higher-order epistatic interactions in a metabolic pathway using a new mapping strategy. Genetics. 176: 563-70. PMID 17194777 DOI: 10.1534/Genetics.106.067033 |
0.399 |
|
| 2007 |
Gore M, Bradbury P, Hogers R, Kirst M, Verstege E, Van Oeveren J, Peleman J, Buckler E, Van Eijk M. Evaluation of target preparation methods for single-feature polymorphism detection in large complex plant genomes Crop Science. 47. DOI: 10.2135/Cropsci2007.02.0085Tpg |
0.7 |
|
| 2007 |
JANSSON S, BUCKLER E. Genome studies and molecular geneticsGenomics — deeper and wider in order to understanding plant diversity Current Opinion in Plant Biology. 10: 107-108. DOI: 10.1016/J.Pbi.2007.02.003 |
0.477 |
|
| 2006 |
Kirst M, Caldo R, Casati P, Tanimoto G, Walbot V, Wise RP, Buckler ES. Genetic diversity contribution to errors in short oligonucleotide microarray analysis. Plant Biotechnology Journal. 4: 489-98. PMID 17309725 DOI: 10.1111/J.1467-7652.2006.00198.X |
0.49 |
|
| 2006 |
Zhang Z, Todhunter RJ, Buckler ES, Van Vleck LD. Technical note: Use of marker-based relationships with multiple-trait derivative-free restricted maximal likelihood. Journal of Animal Science. 85: 881-5. PMID 17085728 DOI: 10.2527/Jas.2006-656 |
0.429 |
|
| 2006 |
Yu J, Buckler ES. Genetic association mapping and genome organization of maize. Current Opinion in Biotechnology. 17: 155-60. PMID 16504497 DOI: 10.1016/J.Copbio.2006.02.003 |
0.515 |
|
| 2006 |
Buckler ES, Gaut BS, McMullen MD. Molecular and functional diversity of maize. Current Opinion in Plant Biology. 9: 172-6. PMID 16459128 DOI: 10.1016/J.Pbi.2006.01.013 |
0.507 |
|
| 2006 |
Zhao W, Canaran P, Jurkuta R, Fulton T, Glaubitz J, Buckler E, Doebley J, Gaut B, Goodman M, Holland J, Kresovich S, McMullen M, Stein L, Ware D. Panzea: a database and resource for molecular and functional diversity in the maize genome. Nucleic Acids Research. 34: D752-7. PMID 16381974 DOI: 10.1093/Nar/Gkj011 |
0.735 |
|
| 2006 |
Jaiswal P, Ni J, Yap I, Ware D, Spooner W, Youens-Clark K, Ren L, Liang C, Zhao W, Ratnapu K, Faga B, Canaran P, Fogleman M, Hebbard C, Avraham S, ... ... Buckler ES, et al. Gramene: a bird's eye view of cereal genomes. Nucleic Acids Research. 34: D717-23. PMID 16381966 DOI: 10.1093/Nar/Gkj154 |
0.528 |
|
| 2006 |
Yu J, Pressoir G, Briggs WH, Vroh Bi I, Yamasaki M, Doebley JF, McMullen MD, Gaut BS, Nielsen DM, Holland JB, Kresovich S, Buckler ES. A unified mixed-model method for association mapping that accounts for multiple levels of relatedness. Nature Genetics. 38: 203-8. PMID 16380716 DOI: 10.1038/Ng1702 |
0.428 |
|
| 2006 |
Tracy WF, Whitt SR, Buckler ES. Recurrent Mutation and Genome Evolution: Example of Sugary1
and the Origin of Sweet Maize Crop Science. 46: S-49-S-54. DOI: 10.2135/Cropsci2006-03-0149Tpg |
0.379 |
|
| 2005 |
Flint-Garcia SA, Thuillet AC, Yu J, Pressoir G, Romero SM, Mitchell SE, Doebley J, Kresovich S, Goodman MM, Buckler ES. Maize association population: a high-resolution platform for quantitative trait locus dissection. The Plant Journal : For Cell and Molecular Biology. 44: 1054-64. PMID 16359397 DOI: 10.1111/J.1365-313X.2005.02591.X |
0.705 |
|
| 2005 |
Vollbrecht E, Springer PS, Goh L, Buckler ES, Martienssen R. Architecture of floral branch systems in maize and related grasses. Nature. 436: 1119-26. PMID 16041362 DOI: 10.1038/Nature03892 |
0.373 |
|
| 2005 |
Szalma SJ, Buckler ES, Snook ME, McMullen MD. Association analysis of candidate genes for maysin and chlorogenic acid accumulation in maize silks. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 110: 1324-33. PMID 15806344 DOI: 10.1007/S00122-005-1973-0 |
0.37 |
|
| 2005 |
Fukunaga K, Hill J, Vigouroux Y, Matsuoka Y, Sanchez G J, Liu K, Buckler ES, Doebley J. Genetic diversity and population structure of teosinte. Genetics. 169: 2241-54. PMID 15687282 DOI: 10.1534/Genetics.104.031393 |
0.48 |
|
| 2004 |
Churchill GA, Airey DC, Allayee H, Angel JM, Attie AD, Beatty J, Beavis WD, Belknap JK, Bennett B, Berrettini W, Bleich A, Bogue M, Broman KW, Buck KJ, Buckler E, et al. The Collaborative Cross, a community resource for the genetic analysis of complex traits. Nature Genetics. 36: 1133-7. PMID 15514660 DOI: 10.1038/Ng1104-1133 |
0.395 |
|
| 2004 |
Wilson LM, Whitt SR, Ibáñez AM, Rocheford TR, Goodman MM, Buckler ES. Dissection of maize kernel composition and starch production by candidate gene association. The Plant Cell. 16: 2719-33. PMID 15377761 DOI: 10.1105/Tpc.104.025700 |
0.698 |
|
| 2003 |
Du C, Buckler E, Muse S. Development of a maize molecular evolutionary genomic database. Comparative and Functional Genomics. 4: 246-9. PMID 18629130 DOI: 10.1002/Cfg.282 |
0.447 |
|
| 2003 |
Jaenicke-Després V, Buckler ES, Smith BD, Gilbert MT, Cooper A, Doebley J, Pääbo S. Early allelic selection in maize as revealed by ancient DNA. Science (New York, N.Y.). 302: 1206-8. PMID 14615538 DOI: 10.1126/Science.1089056 |
0.439 |
|
| 2003 |
Flint-Garcia SA, Thornsberry JM, Buckler ES. Structure of linkage disequilibrium in plants. Annual Review of Plant Biology. 54: 357-74. PMID 14502995 DOI: 10.1146/Annurev.Arplant.54.031902.134907 |
0.538 |
|
| 2003 |
Whitt SR, Buckler ES. Using natural allelic diversity to evaluate gene function. Methods in Molecular Biology (Clifton, N.J.). 236: 123-40. PMID 14501062 DOI: 10.1385/1-59259-413-1:123 |
0.519 |
|
| 2002 |
Whitt SR, Wilson LM, Tenaillon MI, Gaut BS, Buckler ES. Genetic diversity and selection in the maize starch pathway. Proceedings of the National Academy of Sciences of the United States of America. 99: 12959-62. PMID 12244216 DOI: 10.1073/Pnas.202476999 |
0.531 |
|
| 2002 |
Matsuoka Y, Vigouroux Y, Goodman MM, Sanchez G J, Buckler E, Doebley J. A single domestication for maize shown by multilocus microsatellite genotyping. Proceedings of the National Academy of Sciences of the United States of America. 99: 6080-4. PMID 11983901 DOI: 10.1073/Pnas.052125199 |
0.716 |
|
| 2002 |
Buckler ES, Thornsberry JM. Plant molecular diversity and applications to genomics. Current Opinion in Plant Biology. 5: 107-11. PMID 11856604 DOI: 10.1016/S1369-5266(02)00238-8 |
0.55 |
|
| 2001 |
Remington DL, Thornsberry JM, Matsuoka Y, Wilson LM, Whitt SR, Doebley J, Kresovich S, Goodman MM, Buckler ES. Structure of linkage disequilibrium and phenotypic associations in the maize genome. Proceedings of the National Academy of Sciences of the United States of America. 98: 11479-84. PMID 11562485 DOI: 10.1073/Pnas.201394398 |
0.838 |
|
| 2001 |
Buckler ES, Thornsberry JM, Kresovich S. Molecular diversity, structure and domestication of grasses. Genetical Research. 77: 213-8. PMID 11486504 DOI: 10.1017/S0016672301005158 |
0.399 |
|
| 2001 |
Thornsberry JM, Goodman MM, Doebley J, Kresovich S, Nielsen D, Buckler ES. Dwarf8 polymorphisms associate with variation in flowering time. Nature Genetics. 28: 286-9. PMID 11431702 DOI: 10.1038/90135 |
0.74 |
|
| 2001 |
Bennetzen J, Buckler E, Chandler V, Doebley J, Dorweiler J, Gaut B, Freeling M, Hake S, Kellogg E, Poethig RS, Walbot V, Wessler S. Genetic Evidence and the Origin of Maize Latin American Antiquity. 12: 84-86. DOI: 10.2307/971759 |
0.596 |
|
| 1999 |
Lawton-Rauh AL, Buckler ES, Purugganan MD. Patterns of molecular evolution among paralogous floral homeotic genes. Molecular Biology and Evolution. 16: 1037-45. PMID 10474900 DOI: 10.1093/Oxfordjournals.Molbev.A026193 |
0.804 |
|
| 1996 |
Buckler ES, Holtsford TP. Zea ribosomal repeat evolution and substitution patterns. Molecular Biology and Evolution. 13: 623-32. PMID 8882505 DOI: 10.1093/oxfordjournals.molbev.a025622 |
0.697 |
|
| 1996 |
Buckler ES, Holtsford TP. Zea systematics: ribosomal ITS evidence. Molecular Biology and Evolution. 13: 612-22. PMID 8882504 DOI: 10.1093/oxfordjournals.molbev.a025621 |
0.736 |
|
| 1996 |
McCue KA, Buckler ES, Holtsford TP. A Hierarchical View of Genetic Structure in the Rare Annual Plant Clarkia springvillensis Conservation Biology. 10: 1425-1434. DOI: 10.1046/j.1523-1739.1996.10051425.x |
0.732 |
|
| Show low-probability matches. |