Dieter Ebert - Publications

Affiliations: 
University of Basel, Basel, Basel-Stadt, Switzerland 

142 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Ebert D, Fields PD. Host-parasite co-evolution and its genomic signature. Nature Reviews. Genetics. PMID 32860017 DOI: 10.1038/s41576-020-0269-1  0.96
2020 Andras JP, Fields PD, Du Pasquier L, Fredericksen M, Ebert D. Genome-wide association analysis identifies a genetic basis of infectivity in a model bacterial pathogen. Molecular Biology and Evolution. PMID 32658956 DOI: 10.1093/molbev/msaa173  0.96
2020 Bento G, Fields PD, Duneau D, Ebert D. An alternative route of bacterial infection associated with a novel resistance locus in the Daphnia-Pasteuria host-parasite system. Heredity. PMID 32561843 DOI: 10.1038/s41437-020-0332-x  0.96
2020 Ho EKH, Macrae F, Latta LC, McIlroy P, Ebert D, Fields PD, Benner MJ, Schaack S. High and highly variable spontaneous mutation rates in Daphnia. Molecular Biology and Evolution. PMID 32520985 DOI: 10.1093/molbev/msaa142  0.96
2019 Cabalzar AP, Fields PD, Kato Y, Watanabe H, Ebert D. Parasite-mediated selection in a natural metapopulation of Daphnia magna. Molecular Ecology. PMID 31591747 DOI: 10.1111/mec.15260  0.96
2019 Cornetti L, Fields PD, Van Damme K, Ebert D. A fossil-calibrated phylogenomic analysis of Daphnia and the Daphniidae. Molecular Phylogenetics and Evolution. 137: 250-262. PMID 31125657 DOI: 10.1016/j.ympev.2019.05.018  0.96
2019 Dukić M, Berner D, Haag CR, Ebert D. How clonal are clones? A quest for loss of heterozygosity during asexual reproduction in Daphnia magna. Journal of Evolutionary Biology. PMID 30888725 DOI: 10.1111/jeb.13443  0.32
2018 Czypionka T, Fields PD, Routtu J, van den Berg E, Ebert D, Meester L. The genetic architecture underlying diapause termination in a planktonic crustacean. Molecular Ecology. PMID 30592346 DOI: 10.1111/mec.15001  0.96
2018 Fields PD, Obbard DJ, McTaggart SJ, Galimov Y, Little TJ, Ebert D. Mitogenome phylogeographic analysis of a planktonic crustacean. Molecular Phylogenetics and Evolution. PMID 29920335 DOI: 10.1016/j.ympev.2018.06.028  0.96
2018 Andras JP, Fields PD, Ebert D. Spatial population genetic structure of a bacterial parasite in close coevolution with its host. Molecular Ecology. PMID 29509984 DOI: 10.1111/mec.14545  0.96
2018 Toenshoff ER, Fields PD, Bourgeois YX, Ebert D. The End of a 60-Year Riddle: Identification and Genomic Characterization of an Iridovirus, the Causative Agent of White Fat Cell Disease in Zooplankton. G3 (Bethesda, Md.). PMID 29487186 DOI: 10.1534/g3.117.300429  0.96
2017 Hall MD, Bento G, Ebert D. The Evolutionary Consequences of Stepwise Infection Processes. Trends in Ecology & Evolution. PMID 28648806 DOI: 10.1016/j.tree.2017.05.009  0.32
2017 Bento G, Routtu J, Fields PD, Bourgeois Y, Du Pasquier L, Ebert D. The genetic basis of resistance and matching-allele interactions of a host-parasite system: The Daphnia magna-Pasteuria ramosa model. Plos Genetics. 13: e1006596. PMID 28222092 DOI: 10.1371/journal.pgen.1006596  0.96
2017 Orsini L, Gilbert D, Podicheti R, Jansen M, Brown JB, Solari OS, Spanier KI, Colbourne JK, Rusch DB, Decaestecker E, Asselman J, De Schamphelaere KA, Ebert D, Haag CR, Kvist J, et al. Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors. Scientific Data. 4: 170006. PMID 28140384 DOI: 10.1038/sdata.2017.6  0.32
2016 Dukić M, Berner D, Roesti M, Haag CR, Ebert D. A high-density genetic map reveals variation in recombination rate across the genome of Daphnia magna. Bmc Genetics. 17: 137. PMID 27737627 DOI: 10.1186/s12863-016-0445-7  0.32
2016 Orsini L, Gilbert D, Podicheti R, Jansen M, Brown JB, Solari OS, Spanier KI, Colbourne JK, Rush D, Decaestecker E, Asselman J, De Schamphelaere KA, Ebert D, Haag CR, Kvist J, et al. Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors. Scientific Data. 3: 160030. PMID 27164179 DOI: 10.1038/sdata.2016.30  0.32
2016 Ebert D, Duneau D, Hall MD, Luijckx P, Andras JP, Du Pasquier L, Ben-Ami F. A Population Biology Perspective on the Stepwise Infection Process of the Bacterial Pathogen Pasteuria ramosa in Daphnia. Advances in Parasitology. 91: 265-310. PMID 27015951 DOI: 10.1016/bs.apar.2015.10.001  0.44
2016 Rabajante JF, Tubay JM, Ito H, Uehara T, Kakishima S, Morita S, Yoshimura J, Ebert D. Host-parasite Red Queen dynamics with phase-locked rare genotypes. Science Advances. 2: e1501548. PMID 26973878 DOI: 10.1126/sciadv.1501548  1
2016 Mushegian AA, Burcklen E, Schär TM, Ebert D. Temperature-dependent benefits of bacterial exposure in embryonic development of Daphnia magna resting eggs. The Journal of Experimental Biology. PMID 26787480 DOI: 10.1242/jeb.134759  0.32
2016 Metzger CM, Luijckx P, Bento G, Mariadassou M, Ebert D. The red queen lives: Epistasis between linked resistance loci. Evolution; International Journal of Organic Evolution. PMID 26763092 DOI: 10.1111/evo.12854  0.32
2015 Duneau D, Ebert D, Du Pasquier L. Infections by Pasteuria do not protect its natural host Daphnia magna from subsequent infections. Developmental and Comparative Immunology. PMID 26709232 DOI: 10.1016/j.dci.2015.12.004  0.32
2015 Mushegian AA, Ebert D. Rethinking "mutualism" in diverse host-symbiont communities. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. PMID 26568407 DOI: 10.1002/bies.201500074  0.32
2015 Roulin AC, Mariadassou M, Hall MD, Walser JC, Haag C, Ebert D. High genetic variation in resting-stage production in a metapopulation: Is there evidence for local adaptation? Evolution; International Journal of Organic Evolution. 69: 2747-56. PMID 26418426 DOI: 10.1111/evo.12770  0.32
2015 Mariadassou M, Pichon S, Ebert D. Microbial ecosystems are dominated by specialist taxa. Ecology Letters. 18: 974-82. PMID 26251267 DOI: 10.1111/ele.12478  0.32
2015 Fields PD, Reisser C, Dukić M, Haag CR, Ebert D. Genes mirror geography in Daphnia magna. Molecular Ecology. 24: 4521-36. PMID 26190313 DOI: 10.1111/mec.13324  0.32
2015 Clerc M, Ebert D, Hall MD. Expression of parasite genetic variation changes over the course of infection: implications of within-host dynamics for the evolution of virulence. Proceedings. Biological Sciences / the Royal Society. 282: 20142820. PMID 25761710 DOI: 10.1098/rspb.2014.2820  0.32
2015 Sison-Mangus MP, Mushegian AA, Ebert D. Water fleas require microbiota for survival, growth and reproduction. The Isme Journal. 9: 59-67. PMID 25026374 DOI: 10.1038/ismej.2014.116  0.32
2015 Ebert D, Duneau D, Hall MD, Luijckx P, Andras JP, Du Pasquier L, Ben-Ami F. A Population Biology Perspective on the Stepwise Infection Process of the Bacterial Pathogen Pasteuria ramosa in Daphnia Advances in Parasitology. DOI: 10.1016/bs.apar.2015.10.001  1
2014 Routtu J, Hall MD, Albere B, Beisel C, Bergeron RD, Chaturvedi A, Choi JH, Colbourne J, De Meester L, Stephens MT, Stelzer CP, Solorzano E, Thomas WK, Pfrender ME, Ebert D. An SNP-based second-generation genetic map of Daphnia magna and its application to QTL analysis of phenotypic traits. Bmc Genomics. 15: 1033. PMID 25431334 DOI: 10.1186/1471-2164-15-1033  1
2014 Chipman AD, Ferrier DE, Brena C, Qu J, Hughes DS, Schröder R, Torres-Oliva M, Znassi N, Jiang H, Almeida FC, Alonso CR, Apostolou Z, Aqrawi P, Arthur W, Barna JC, ... ... Ebert D, et al. The first myriapod genome sequence reveals conservative arthropod gene content and genome organisation in the centipede Strigamia maritima. Plos Biology. 12: e1002005. PMID 25423365 DOI: 10.1371/journal.pbio.1002005  1
2014 Haag KL, James TY, Pombert JF, Larsson R, Schaer TM, Refardt D, Ebert D. Evolution of a morphological novelty occurred before genome compaction in a lineage of extreme parasites. Proceedings of the National Academy of Sciences of the United States of America. 111: 15480-5. PMID 25313038 DOI: 10.1073/pnas.1410442111  1
2014 Lange B, Reuter M, Ebert D, Muylaert K, Decaestecker E. Diet quality determines interspecific parasite interactions in host populations. Ecology and Evolution. 4: 3093-102. PMID 25247066 DOI: 10.1002/ece3.1167  1
2014 Sheikh-Jabbari E, Hall MD, Ben-Ami F, Ebert D. The expression of virulence for a mixed-mode transmitted parasite in a diapausing host. Parasitology. 141: 1097-107. PMID 24786012 DOI: 10.1017/S0031182014000456  1
2014 Yampolsky LY, Schaer TM, Ebert D. Adaptive phenotypic plasticity and local adaptation for temperature tolerance in freshwater zooplankton. Proceedings. Biological Sciences / the Royal Society. 281: 20132744. PMID 24352948 DOI: 10.1098/rspb.2013.2744  1
2014 Luijckx P, Duneau D, Andras JP, Ebert D. Cross-species infection trials reveal cryptic parasite varieties and a putative polymorphism shared among host species. Evolution; International Journal of Organic Evolution. 68: 577-86. PMID 24116675 DOI: 10.1111/evo.12289  1
2013 Schlotz N, Ebert D, Martin-Creuzburg D. Dietary supply with polyunsaturated fatty acids and resulting maternal effects influence host--parasite interactions. Bmc Ecology. 13: 41. PMID 24175981 DOI: 10.1186/1472-6785-13-41  1
2013 Brites D, Brena C, Ebert D, Du Pasquier L. More than one way to produce protein diversity: duplication and limited alternative splicing of an adhesion molecule gene in basal arthropods. Evolution; International Journal of Organic Evolution. 67: 2999-3011. PMID 24094349 DOI: 10.1111/evo.12179  1
2013 Hall MD, Ebert D. The genetics of infectious disease susceptibility: has the evidence for epistasis been overestimated? Bmc Biology. 11: 79. PMID 23855805 DOI: 10.1186/1741-7007-11-79  1
2013 Roulin AC, Routtu J, Hall MD, Janicke T, Colson I, Haag CR, Ebert D. Local adaptation of sex induction in a facultative sexual crustacean: insights from QTL mapping and natural populations of Daphnia magna. Molecular Ecology. 22: 3567-79. PMID 23786714 DOI: 10.1111/mec.12308  1
2013 Luijckx P, Fienberg H, Duneau D, Ebert D. A matching-allele model explains host resistance to parasites. Current Biology : Cb. 23: 1085-8. PMID 23707426 DOI: 10.1016/j.cub.2013.04.064  1
2013 Haag KL, Sheikh-Jabbari E, Ben-Ami F, Ebert D. Microsatellite and single-nucleotide polymorphisms indicate recurrent transitions to asexuality in a microsporidian parasite. Journal of Evolutionary Biology. 26: 1117-28. PMID 23530861 DOI: 10.1111/jeb.12125  1
2013 Ebert D, Hottinger JW, Pajunen VI. Unsuitable habitat patches lead to severe underestimation of dynamics and gene flow in a zooplankton metapopulation. The Journal of Animal Ecology. 82: 759-69. PMID 23496795 DOI: 10.1111/1365-2656.12044  1
2013 Antonovics J, Boots M, Ebert D, Koskella B, Poss M, Sadd BM. The origin of specificity by means of natural selection: evolved and nonhost resistance in host-pathogen interactions. Evolution; International Journal of Organic Evolution. 67: 1-9. PMID 23289557 DOI: 10.1111/j.1558-5646.2012.01793.x  1
2013 Andras JP, Ebert D. A novel approach to parasite population genetics: experimental infection reveals geographic differentiation, recombination and host-mediated population structure in Pasteuria ramosa, a bacterial parasite of Daphnia. Molecular Ecology. 22: 972-86. PMID 23279064 DOI: 10.1111/mec.12159  1
2013 Haag KL, Traunecker E, Ebert D. Single-nucleotide polymorphisms of two closely related microsporidian parasites suggest a clonal population expansion after the last glaciation. Molecular Ecology. 22: 314-26. PMID 23163569 DOI: 10.1111/mec.12126  1
2013 Hall MD, Vettiger A, Ebert D. Interactions between environmental stressors: the influence of salinity on host-parasite interactions between Daphnia magna and Pasteuria ramosa. Oecologia. 171: 789-96. PMID 23001624 DOI: 10.1007/s00442-012-2452-3  1
2013 Ebert D. The epidemiology and evolution of symbionts with mixed-mode transmission Annual Review of Ecology, Evolution, and Systematics. 44: 623-643. DOI: 10.1146/annurev-ecolsys-032513-100555  1
2012 Duneau D, Luijckx P, Ruder LF, Ebert D. Sex-specific effects of a parasite evolving in a female-biased host population. Bmc Biology. 10: 104. PMID 23249484 DOI: 10.1186/1741-7007-10-104  1
2012 Kawecki TJ, Lenski RE, Ebert D, Hollis B, Olivieri I, Whitlock MC. Experimental evolution. Trends in Ecology & Evolution. 27: 547-60. PMID 22819306 DOI: 10.1016/j.tree.2012.06.001  1
2012 Hall MD, Ebert D. Disentangling the influence of parasite genotype, host genotype and maternal environment on different stages of bacterial infection in Daphnia magna. Proceedings. Biological Sciences / the Royal Society. 279: 3176-83. PMID 22593109 DOI: 10.1098/rspb.2012.0509  1
2012 Duneau D, Ebert D. The role of moulting in parasite defence. Proceedings. Biological Sciences / the Royal Society. 279: 3049-54. PMID 22496187 DOI: 10.1098/rspb.2012.0407  1
2012 Duneau D, Ebert D. Host sexual dimorphism and parasite adaptation. Plos Biology. 10: e1001271. PMID 22389630 DOI: 10.1371/journal.pbio.1001271  1
2012 Mennerat A, Hamre L, Ebert D, Nilsen F, Dávidová M, Skorping A. Life history and virulence are linked in the ectoparasitic salmon louse Lepeophtheirus salmonis. Journal of Evolutionary Biology. 25: 856-61. PMID 22356541 DOI: 10.1111/j.1420-9101.2012.02474.x  1
2012 Luijckx P, Fienberg H, Duneau D, Ebert D. Resistance to a bacterial parasite in the crustacean Daphnia magna shows Mendelian segregation with dominance Heredity. 108: 547-551. PMID 22167056 DOI: 10.1038/hdy.2011.122  1
2012 Le Coadic M, Simon M, Marchetti A, Ebert D, Cosson P. Daphnia magna, a host for evaluation of bacterial virulence. Applied and Environmental Microbiology. 78: 593-5. PMID 22081563 DOI: 10.1128/AEM.06278-11  1
2012 Kawecki TJ, Lenski RE, Ebert D, Hollis B, Olivieri I, Whitlock MC. The value of complementary approaches in evolutionary research: Reply to Magalhães and Matos Trends in Ecology and Evolution. 27: 650-651. DOI: 10.1016/j.tree.2012.09.007  1
2012 Refardt D, Ebert D. The impact of infection on host competition and its relationship to parasite persistence in a Daphnia microparasite system Evolutionary Ecology. 26: 95-107. DOI: 10.1007/s10682-011-9487-5  1
2011 Brites D, Encinas-Viso F, Ebert D, Du Pasquier L, Haag CR. Population genetics of duplicated alternatively spliced exons of the Dscam gene in Daphnia and Drosophila. Plos One. 6: e27947. PMID 22174757 DOI: 10.1371/journal.pone.0027947  1
2011 McElroy K, Mouton L, Du Pasquier L, Qi W, Ebert D. Characterisation of a large family of polymorphic collagen-like proteins in the endospore-forming bacterium Pasteuria ramosa. Research in Microbiology. 162: 701-14. PMID 21726633 DOI: 10.1016/j.resmic.2011.06.009  1
2011 Lass S, Hottinger JW, Fabbro T, Ebert D. Converging seasonal prevalence dynamics in experimental epidemics. Bmc Ecology. 11: 14. PMID 21586126 DOI: 10.1186/1472-6785-11-14  1
2011 Ben-Ami F, Rigaud T, Ebert D. The expression of virulence during double infections by different parasites with conflicting host exploitation and transmission strategies Journal of Evolutionary Biology. 24: 1307-1316. PMID 21481055 DOI: 10.1111/j.1420-9101.2011.02264.x  1
2011 Duneau D, Luijckx P, Ben-Ami F, Laforsch C, Ebert D. Resolving the infection process reveals striking differences in the contribution of environment, genetics and phylogeny to host-parasite interactions. Bmc Biology. 9: 11. PMID 21342515 DOI: 10.1186/1741-7007-9-11  1
2011 Ebert D. Genomics. A genome for the environment. Science (New York, N.Y.). 331: 539-40. PMID 21292957 DOI: 10.1126/science.1202092  1
2011 Luijckx P, Ben-Ami F, Mouton L, Du Pasquier L, Ebert D. Cloning of the unculturable parasite Pasteuria ramosa and its Daphnia host reveals extreme genotype-genotype interactions. Ecology Letters. 14: 125-31. PMID 21091597 DOI: 10.1111/j.1461-0248.2010.01561.x  1
2011 Haag KL, Larsson JI, Refardt D, Ebert D. Cytological and molecular description of Hamiltosporidium tvaerminnensis gen. et sp. nov., a microsporidian parasite of Daphnia magna, and establishment of Hamiltosporidium magnivora comb. nov. Parasitology. 138: 447-62. PMID 20946698 DOI: 10.1017/S0031182010001393  1
2011 Ebert D, Qi W. An evolutionary ecology perspective on comparative metagenomics Metagenomics and Its Applications in Agriculture, Biomedicine and Environmental Studies. 211-236.  1
2010 Mennerat A, Nilsen F, Ebert D, Skorping A. Intensive Farming: Evolutionary Implications for Parasites and Pathogens. Evolutionary Biology. 37: 59-67. PMID 21151485 DOI: 10.1007/s11692-010-9089-0  1
2010 Altermatt F, Ebert D. Populations in small, ephemeral habitat patches may drive dynamics in a Daphnia magna metapopulation. Ecology. 91: 2975-82. PMID 21058557 DOI: 10.1890/09-2016.1  1
2010 Routtu J, Jansen B, Colson I, De Meester L, Ebert D. The first-generation Daphnia magna linkage map. Bmc Genomics. 11: 508. PMID 20860799 DOI: 10.1186/1471-2164-11-508  1
2010 Keeling PJ, Corradi N, Morrison HG, Haag KL, Ebert D, Weiss LM, Akiyoshi DE, Tzipori S. The reduced genome of the parasitic microsporidian Enterocytozoon bieneusi lacks genes for core carbon metabolism. Genome Biology and Evolution. 2: 304-9. PMID 20624735 DOI: 10.1093/gbe/evq022  1
2010 Ganz HH, Ebert D. Benefits of host genetic diversity for resistance to infection depend on parasite diversity. Ecology. 91: 1263-8. PMID 20503859 DOI: 10.1890/09-1243.1  1
2010 Frost PC, Ebert D, Larson JH, Marcus MA, Wagner ND, Zalewski A. Transgenerational effects of poor elemental food quality on Daphnia magna. Oecologia. 162: 865-72. PMID 19957090 DOI: 10.1007/s00442-009-1517-4  1
2010 Ben-Ami F, Ebert D, Regoes RR. Pathogen dose infectivity curves as a method to analyze the distribution of host susceptibility: a quantitative assessment of maternal effects after food stress and pathogen exposure. The American Naturalist. 175: 106-15. PMID 19911987 DOI: 10.1086/648672  1
2010 Pulkkinen K, Suomalainen LR, Read AF, Ebert D, Rintamäki P, Valtonen ET. Intensive fish farming and the evolution of pathogen virulence: The case of columnaris disease in Finland Proceedings of the Royal Society B: Biological Sciences. 277: 593-600. PMID 19864284 DOI: 10.1098/rspb.2009.1659  1
2010 Ebert D, Bull JJ. The evolution and expression of virulence Evolution in Health and Disease. DOI: 10.1093/acprof:oso/9780199207466.003.0012  1
2009 Colson I, Du Pasquier L, Ebert D. Intragenic tandem repeats in Daphnia magna: structure, function and distribution. Bmc Research Notes. 2: 206. PMID 19807922 DOI: 10.1186/1756-0500-2-206  1
2009 Corradi N, Haag KL, Pombert JF, Ebert D, Keeling PJ. Draft genome sequence of the Daphnia pathogen Octosporea bayeri: insights into the gene content of a large microsporidian genome and a model for host-parasite interactions. Genome Biology. 10: R106. PMID 19807911 DOI: 10.1186/gb-2009-10-10-r106  1
2009 Mouton L, Traunecker E, McElroy K, Du Pasquier L, Ebert D. Identification of a polymorphic collagen-like protein in the crustacean bacteria Pasteuria ramosa. Research in Microbiology. 160: 792-9. PMID 19770039 DOI: 10.1016/j.resmic.2009.08.016  1
2009 Qi W, Nong G, Preston JF, Ben-Ami F, Ebert D. Comparative metagenomics of Daphnia symbionts. Bmc Genomics. 10: 172. PMID 19383155 DOI: 10.1186/1471-2164-10-172  1
2009 Altermatt F, Pajunen VI, Ebert D. Desiccation of rock pool habitats and its influence on population persistence in a Daphnia metacommunity. Plos One. 4: e4703. PMID 19277113 DOI: 10.1371/journal.pone.0004703  1
2009 Bieger A, Ebert D. Expression of parasite virulence at different host population densities under natural conditions. Oecologia. 160: 247-55. PMID 19219457 DOI: 10.1007/s00442-009-1297-x  1
2009 Gaba S, Ebert D. Time-shift experiments as a tool to study antagonistic coevolution. Trends in Ecology & Evolution. 24: 226-32. PMID 19201504 DOI: 10.1016/j.tree.2008.11.005  1
2009 Altermatt F, Baumeyer A, Ebert D. Experimental evidence for male biased flight-to-light behavior in two moth species Entomologia Experimentalis Et Applicata. 130: 259-265. DOI: 10.1111/j.1570-7458.2008.00817.x  1
2008 Frost PC, Ebert D, Smith VH. Bacterial infection changes the elemental composition of Daphnia magna. The Journal of Animal Ecology. 77: 1265-72. PMID 18631369 DOI: 10.1111/j.1365-2656.2008.01438.x  1
2008 Altermatt F, Ebert D. The influence of pool volume and summer desiccation on the production of the resting and dispersal stage in a Daphnia metapopulation. Oecologia. 157: 441-52. PMID 18597121 DOI: 10.1007/s00442-008-1080-4  1
2008 Ebert D. Host-parasite coevolution: Insights from the Daphnia-parasite model system. Current Opinion in Microbiology. 11: 290-301. PMID 18556238 DOI: 10.1016/j.mib.2008.05.012  1
2008 Altermatt F, Ebert D. Genetic diversity of Daphnia magna populations enhances resistance to parasites. Ecology Letters. 11: 918-28. PMID 18479453 DOI: 10.1111/j.1461-0248.2008.01203.x  1
2008 Zbinden M, Haag CR, Ebert D. Experimental evolution of field populations of Daphnia magna in response to parasite treatment Journal of Evolutionary Biology. 21: 1068-1078. PMID 18462312 DOI: 10.1111/j.1420-9101.2008.01541.x  1
2008 Frost PC, Ebert D, Smith VH. Responses of a bacterial pathogen to phosphorus limitation of its aquatic invertebrate host. Ecology. 89: 313-8. PMID 18409420 DOI: 10.1890/07-0389.1  1
2008 Brites D, McTaggart S, Morris K, Anderson J, Thomas K, Colson I, Fabbro T, Little TJ, Ebert D, Du Pasquier L. The Dscam homologue of the crustacean Daphnia is diversified by alternative splicing like in insects Molecular Biology and Evolution. 25: 1429-1439. PMID 18403399 DOI: 10.1093/molbev/msn087  1
2008 Ben-Ami F, Mouton L, Ebert D. The effects of multiple infections on the expression and evolution of virulence in a Daphnia-endoparasite system. Evolution; International Journal of Organic Evolution. 62: 1700-11. PMID 18384658 DOI: 10.1111/j.1558-5646.2008.00391.x  1
2008 Mouton L, Ebert D. Variable-number-of-tandem-repeats analysis of genetic diversity in Pasteuria ramosa Current Microbiology. 56: 447-452. PMID 18214600 DOI: 10.1007/s00284-008-9104-1  1
2008 Ben-Ami F, Regoes RR, Ebert D. A quantitative test of the relationship between parasite dose and infection probability across different host-parasite combinations. Proceedings. Biological Sciences / the Royal Society. 275: 853-9. PMID 18198145 DOI: 10.1098/rspb.2007.1544  1
2008 Rodrigues JL, Duffy MA, Tessier AJ, Ebert D, Mouton L, Schmidt TM. Phylogenetic characterization and prevalence of "Spirobacillus cienkowskii," a red-pigmented, spiral-shaped bacterial pathogen of freshwater Daphnia species. Applied and Environmental Microbiology. 74: 1575-82. PMID 18192404 DOI: 10.1128/AEM.02438-07  1
2008 Roth O, Ebert D, Vizoso DB, Bieger A, Lass S. Male-biased sex-ratio distortion caused by Octosporea bayeri, a vertically and horizontally-transmitted parasite of Daphnia magna. International Journal For Parasitology. 38: 969-79. PMID 18190917 DOI: 10.1016/j.ijpara.2007.11.009  1
2008 Schmidt LM, Mouton L, Nong G, Ebert D, Preston JF. Genetic and immunological comparison of the cladoceran parasite Pasteuria ramosa with the nematode parasite Pasteuria penetrans. Applied and Environmental Microbiology. 74: 259-64. PMID 17933927 DOI: 10.1128/AEM.01778-07  1
2008 Altermatt F, Pajunen VI, Ebert D. Climate change affects colonization dynamics in a metacommunity of three Daphnia species Global Change Biology. 14: 1209-1220. DOI: 10.1111/j.1365-2486.2008.01588.x  1
2007 Altermatt F, Ebert D. The genotype specific competitive ability does not correlate with infection in natural Daphnia magna populations. Plos One. 2: e1280. PMID 18060074 DOI: 10.1371/journal.pone.0001280  1
2007 Decaestecker E, Gaba S, Raeymaekers JA, Stoks R, Van Kerckhoven L, Ebert D, De Meester L. Host-parasite 'Red Queen' dynamics archived in pond sediment. Nature. 450: 870-3. PMID 18004303 DOI: 10.1038/nature06291  1
2007 Refardt D, Ebert D. Inference of parasite local adaptation using two different fitness components Journal of Evolutionary Biology. 20: 921-929. PMID 17465903 DOI: 10.1111/j.1420-9101.2007.01307.x  1
2007 Haag CR, Ebert D. Genotypic selection in Daphnia populations consisting of inbred sibships Journal of Evolutionary Biology. 20: 881-891. PMID 17465899 DOI: 10.1111/j.1420-9101.2007.01313.x  1
2007 Ebert D, Altermatt F, Lass S. A short term benefit for outcrossing in a Daphnia metapopulation in relation to parasitism. Journal of the Royal Society, Interface / the Royal Society. 4: 777-85. PMID 17456451 DOI: 10.1098/rsif.2007.0232  1
2007 Mouton L, Nong G, Preston JF, Ebert D. Variable-number tandem repeats as molecular markers for biotypes of Pasteuria ramosa in Daphnia spp. Applied and Environmental Microbiology. 73: 3715-8. PMID 17400766 DOI: 10.1128/AEM.02398-06  1
2007 Altermatt F, Hottinger J, Ebert D. Parasites promote host gene flow in a metapopulation Evolutionary Ecology. 21: 561-575. DOI: 10.1007/s10682-006-9136-6  1
2006 Jensen KH, Little TJ, Little T, Skorping A, Ebert D. Empirical support for optimal virulence in a castrating parasite. Plos Biology. 4: e197. PMID 16719563 DOI: 10.1371/journal.pbio.0040197  1
2006 Pulkkinen K, Ebert D. Persistence of host and parasite populations subject to experimental size-selective removal Oecologia. 149: 72-80. PMID 16685511 DOI: 10.1007/s00442-006-0433-0  1
2006 Little TJ, Watt K, Ebert D. Parasite-host specificity: experimental studies on the basis of parasite adaptation. Evolution; International Journal of Organic Evolution. 60: 31-8. PMID 16568629 DOI: 10.1554/05-316.1  1
2006 Refardt D, Ebert D. Quantitative PCR to detect, discriminate and quantify intracellular parasites in their host: An example from three microsporidians in Daphnia Parasitology. 133: 11-18. PMID 16563203 DOI: 10.1017/S0031182006000060  1
2006 Lass S, Ebert D. Apparent seasonality of parasite dynamics: analysis of cyclic prevalence patterns Proceedings. Biological Sciences / the Royal Society. 273: 199-206. PMID 16555788 DOI: 10.1098/rspb.2005.3310  1
2006 Haag CR, Riek M, Hottinger JW, Pajunen VI, Ebert D. Founder events as determinants of within-island and among-island genetic structure of Daphnia metapopulations Heredity. 96: 150-158. PMID 16369578 DOI: 10.1038/sj.hdy.6800774  1
2006 Wolinska J, Bittner K, Ebert D, Spaak P. The coexistence of hybrid and parental Daphnia: The role of parasites Proceedings of the Royal Society B: Biological Sciences. 273: 1977-1983. DOI: 10.1098/rspb.2006.3523  1
2005 Vizoso DB, Ebert D. Phenotypic plasticity of host-parasite interactions in response to the route of infection Journal of Evolutionary Biology. 18: 911-921. PMID 16033563 DOI: 10.1111/j.1420-9101.2005.00920.x  1
2005 Vizoso DB, Lass S, Ebert D. Different mechanisms of transmission of the microsporidium Octosporea bayeri: A cocktail of solutions for the problem of parasite permanence Parasitology. 130: 501-509. PMID 15991493 DOI: 10.1017/S0031182004006699  1
2005 Haag CR, Riek M, Hottinger JW, Pajunen VI, Ebert D. Genetic diversity and genetic differentiation in Daphnia metapopulations with subpopulations of known age Genetics. 170: 1809-1820. PMID 15937138 DOI: 10.1534/genetics.104.036814  1
2005 Decaestecker E, Declerck S, De Meester L, Ebert D. Ecological implications of parasites in natural Daphnia populations Oecologia. 144: 382-390. PMID 15891825 DOI: 10.1007/s00442-005-0083-7  1
2005 Vizoso DB, Ebert D. Mixed inoculations of a microsporidian parasite with horizontal and vertical infections Oecologia. 143: 157-166. PMID 15742220 DOI: 10.1007/s00442-004-1771-4  1
2005 Zbinden M, Lass S, Refardt D, Hottinger J, Ebert D. Octosporea bayeri: Fumidil B inhibits vertical transmission in Daphnia magna Experimental Parasitology. 109: 58-61. PMID 15639141 DOI: 10.1016/j.exppara.2004.11.002  1
2004 Ebert D, Carius HJ, Little T, Decaestecker E. The evolution of virulence when parasites cause host castration and gigantism American Naturalist. 164: S19-S32. PMID 15540139 DOI: 10.1086/424606  1
2004 Haag CR, Ebert D. Parasite-mediated selection in experimental metapopulations of Daphnia magna Proceedings of the Royal Society B: Biological Sciences. 271: 2149-2155. PMID 15475335 DOI: 10.1098/rspb.2004.2841  1
2004 Fels D, Lee VA, Ebert D. The impact of microparasites on the vertical distribution of Daphnia magna Archiv Fur Hydrobiologie. 161: 65-80. DOI: 10.1127/0003-9136/2004/0161-0065  1
2004 Kawecki TJ, Ebert D. Conceptual issues in local adaptation Ecology Letters. 7: 1225-1241. DOI: 10.1111/j.1461-0248.2004.00684.x  1
2004 Ebert D, Salathé P, Kawecki TJ. Evidence for epistasis: Reply to Trouve et al. Journal of Evolutionary Biology. 17: 1402-1404. DOI: 10.1111/j.1420-9101.2004.00803.x  1
2004 Haag CR, Ebert D. A new hypothesis to explain geographic parthenogenesis Annales Zoologici Fennici. 41: 539-544.  1
2003 Decaestecker E, Vergote A, Ebert D, De Meester L. Evidence for strong host clone-parasite species interactions in the Daphnia microparasite system Evolution. 57: 784-792. PMID 12778548 DOI: 10.1111/j.0014-3820.2003.tb00290.x  1
2003 Ebert D, Bull JJ. Challenging the trade-off model for the evolution of virulence: is virulence management feasible? Trends in Microbiology. 11: 15-20. PMID 12526850 DOI: 10.1016/S0966-842X(02)00003-3  1
2002 Refardt D, Canning EU, Mathis A, Cheney SA, Lafranchi-Tristem NJ, Ebert D. Small subunit ribosomal DNA phylogeny of microsporidia that infect Daphnia (Crustacea: Cladocera). Parasitology. 124: 381-9. PMID 12003062 DOI: 10.1017/S0031182001001305  1
2002 Regoes RR, Ebert D, Bonhoeffer S. Dose-dependent infection rates of parasites produce the Allee effect in epidemiology Proceedings of the Royal Society B: Biological Sciences. 269: 271-279. PMID 11839196 DOI: 10.1098/rspb.2001.1816  1
2002 Ebert D, Haag C, Kirkpatrick M, Riek M, Hottinger JW, Pajunen VI. A selective advantage to immigrant genes in a Daphnia metapopulation. Science (New York, N.Y.). 295: 485-8. PMID 11799241 DOI: 10.1126/science.1067485  1
2002 Little TJ, Carius HJ, Sakwinska O, Ebert D. Competitiveness and life-history characteristics of Daphnia with respect to susceptibility to a bacterial pathogen Journal of Evolutionary Biology. 15: 796-802. DOI: 10.1046/j.1420-9101.2002.00436.x  1
2001 Stearns SC, Ebert D. Evolution in health and disease: work in progress. The Quarterly Review of Biology. 76: 417-32. PMID 11783396 DOI: 10.1093/acprof:oso/9780199207466.001.0001  0.36
2001 Little TJ, Ebert D. Temporal patterns of genetic variation for resistance and infectivity in a Daphnia-microparasite system Evolution. 55: 1146-1152. PMID 11475050 DOI: 10.1111/j.0014-3820.2001.tb00634.x  1
2001 Carius HJ, Little TJ, Ebert D. Genetic variation in a host-parasite association: Potential for coevolution and frequency-dependent selection Evolution. 55: 1136-1145. PMID 11475049 DOI: 10.1111/j.0014-3820.2001.tb00633.x  1
2001 Canning EU, Curry A, Cheney SA, Lafranchi-Tristem NJ, Ebert D, Rifardt D, Killick-Kendrick M, Killick-Kendrick R. Flabelliforma montana (Phylum Microsporidia) from phlebotomus ariasi (Diptera, Psychodidae): Ultrastructural observations and phylogenetic relationships European Journal of Protistology. 37: 207-221.  1
2000 Little TJ, Ebert D. The cause of parasitic infection in natural populations of Daphnia (Crustacea: Cladocera): The role of host genetics Proceedings of the Royal Society B: Biological Sciences. 267: 2037-2042. PMID 11416906 DOI: 10.1098/rspb.2000.1246  1
2000 Little TJ, Ebert D. Sex, linkage disequilibrium and patterns of parasitism in three species of cyclically parthenogenetic Daphnia (Cladocera: Crustacea) Heredity. 85: 257-265. PMID 11012729 DOI: 10.1046/j.1365-2540.2000.00757.x  1
2000 Ebert D, Lipsitch M, Mangin KL. The effect of parasites on host population density and extinction: Experimental epidemiology with Daphnia and six microparasites American Naturalist. 156: 459-477. DOI: 10.1086/303404  1
1999 Little TJ, Ebert D. Associations between parasitism and host genotype in natural populations of Daphnia (Crustacea: Cladocera) Journal of Animal Ecology. 68: 134-149. DOI: 10.1046/j.1365-2656.1999.00271.x  1
1998 Bengtsson J, Ebert D. Distributions and impacts of microparasites on Daphnia in a rockpool metapopulation Oecologia. 115: 213-221. DOI: 10.1007/s004420050510  1
1996 Ebert D, Hamilton WD. Sex against virulence: the coevolution of parasitic diseases. Trends in Ecology & Evolution. 11: 79-82. PMID 21237766 DOI: 10.1016/0169-5347(96)81047-0  1
1996 Bonhoeffer S, Lenski RE, Ebert D. The curse of the pharaoh: the evolution of virulence in pathogens with long living propagules. Proceedings. Biological Sciences / the Royal Society. 263: 715-21. PMID 8763793 DOI: 10.1098/rspb.1996.0107  1
1995 Lipsitch M, Nowak MA, Ebert D, May RM. The population dynamics of vertically and horizontally transmitted parasites. Proceedings. Biological Sciences / the Royal Society. 260: 321-7. PMID 7630898 DOI: 10.1098/rspb.1995.0099  1
1995 Mangin KL, Lipsitch M, Ebert D. Virulence and transmission modes of two microsporidia in Daphnia magna Parasitology. 111: 133-142. DOI: 10.1017/S0031182000064878  1
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